Multiple sequence alignment - TraesCS3B01G129100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G129100 chr3B 100.000 3593 0 0 1 3593 109863323 109859731 0.000000e+00 6636.0
1 TraesCS3B01G129100 chr3B 94.343 548 19 3 2655 3202 109797451 109796916 0.000000e+00 830.0
2 TraesCS3B01G129100 chr3B 83.740 369 55 5 3229 3593 13729146 13728779 9.550000e-91 344.0
3 TraesCS3B01G129100 chr3B 83.465 254 35 7 21 269 59707663 59707412 2.790000e-56 230.0
4 TraesCS3B01G129100 chr3D 93.674 1565 81 9 1189 2739 66309985 66311545 0.000000e+00 2326.0
5 TraesCS3B01G129100 chr3D 88.304 1445 112 28 1619 3051 66139169 66137770 0.000000e+00 1679.0
6 TraesCS3B01G129100 chr3D 87.630 962 55 27 276 1197 66309022 66309959 0.000000e+00 1059.0
7 TraesCS3B01G129100 chr3D 91.105 697 29 12 521 1197 66140687 66140004 0.000000e+00 913.0
8 TraesCS3B01G129100 chr3D 87.850 749 50 15 2100 2842 66146993 66146280 0.000000e+00 841.0
9 TraesCS3B01G129100 chr3D 95.117 512 23 2 1922 2431 66260860 66260349 0.000000e+00 806.0
10 TraesCS3B01G129100 chr3D 92.037 427 33 1 1741 2167 66124737 66124312 1.850000e-167 599.0
11 TraesCS3B01G129100 chr3D 81.644 730 70 34 2258 2963 66124288 66123599 6.780000e-152 547.0
12 TraesCS3B01G129100 chr3D 90.210 429 27 7 1200 1628 66139965 66139552 2.440000e-151 545.0
13 TraesCS3B01G129100 chr3D 81.159 621 43 34 2424 3026 66252766 66252202 7.130000e-117 431.0
14 TraesCS3B01G129100 chr3D 86.471 340 36 9 2859 3195 66306914 66306582 7.330000e-97 364.0
15 TraesCS3B01G129100 chr3D 86.095 338 39 7 2859 3195 66300311 66299981 1.230000e-94 357.0
16 TraesCS3B01G129100 chr3D 83.761 351 22 20 2454 2794 66237494 66237169 2.100000e-77 300.0
17 TraesCS3B01G129100 chr3D 87.234 235 28 2 2962 3195 66252201 66251968 2.130000e-67 267.0
18 TraesCS3B01G129100 chr3D 95.312 128 6 0 3076 3203 66121978 66121851 1.690000e-48 204.0
19 TraesCS3B01G129100 chr3D 95.833 120 5 0 3076 3195 66137775 66137656 1.020000e-45 195.0
20 TraesCS3B01G129100 chr3D 97.297 37 1 0 745 781 66147049 66147013 2.990000e-06 63.9
21 TraesCS3B01G129100 chr3D 97.059 34 1 0 1255 1288 66260940 66260907 1.390000e-04 58.4
22 TraesCS3B01G129100 chr3D 100.000 28 0 0 507 534 66140733 66140706 6.000000e-03 52.8
23 TraesCS3B01G129100 chr3A 92.943 1573 82 12 1200 2761 77411390 77409836 0.000000e+00 2263.0
24 TraesCS3B01G129100 chr3A 86.896 786 47 25 456 1197 77412202 77411429 0.000000e+00 830.0
25 TraesCS3B01G129100 chr3A 84.375 448 43 14 2758 3195 77409719 77409289 7.180000e-112 414.0
26 TraesCS3B01G129100 chr5B 95.161 372 18 0 3222 3593 691960023 691960394 4.000000e-164 588.0
27 TraesCS3B01G129100 chr5B 83.333 276 38 6 3 271 404478165 404478439 7.700000e-62 248.0
28 TraesCS3B01G129100 chr1B 78.418 885 162 17 1683 2551 658469570 658470441 1.890000e-152 549.0
29 TraesCS3B01G129100 chr1B 77.794 698 127 19 1679 2356 660315977 660316666 4.320000e-109 405.0
30 TraesCS3B01G129100 chr1B 85.014 367 52 3 3229 3593 105302281 105301916 1.580000e-98 370.0
31 TraesCS3B01G129100 chr1B 82.727 110 13 3 2387 2496 660231780 660231677 3.820000e-15 93.5
32 TraesCS3B01G129100 chr1B 87.879 66 8 0 1363 1428 658469226 658469291 1.070000e-10 78.7
33 TraesCS3B01G129100 chr1D 77.380 893 171 18 1668 2541 473594632 473595512 5.360000e-138 501.0
34 TraesCS3B01G129100 chr1D 92.216 334 24 2 3261 3593 464389154 464388822 4.200000e-129 472.0
35 TraesCS3B01G129100 chr1D 82.727 110 13 3 2387 2496 474968354 474968251 3.820000e-15 93.5
36 TraesCS3B01G129100 chr1D 86.364 66 9 0 1363 1428 473594304 473594369 4.980000e-09 73.1
37 TraesCS3B01G129100 chr1A 76.217 883 182 19 1683 2551 567720236 567721104 3.290000e-120 442.0
38 TraesCS3B01G129100 chr1A 76.217 883 182 19 1683 2551 567814613 567815481 3.290000e-120 442.0
39 TraesCS3B01G129100 chr1A 76.255 737 154 15 1574 2291 570614930 570615664 4.380000e-99 372.0
40 TraesCS3B01G129100 chr1A 78.571 392 75 6 1683 2068 567831075 567831463 2.140000e-62 250.0
41 TraesCS3B01G129100 chr1A 83.178 107 15 1 2387 2493 570615796 570615899 1.060000e-15 95.3
42 TraesCS3B01G129100 chr1A 87.879 66 8 0 1363 1428 567719892 567719957 1.070000e-10 78.7
43 TraesCS3B01G129100 chr1A 87.879 66 8 0 1363 1428 567830731 567830796 1.070000e-10 78.7
44 TraesCS3B01G129100 chr6B 87.912 364 41 3 3231 3593 286799438 286799799 3.320000e-115 425.0
45 TraesCS3B01G129100 chr6B 85.348 273 34 5 3 271 198957806 198957536 9.820000e-71 278.0
46 TraesCS3B01G129100 chr6B 84.229 279 32 5 3 269 64797693 64797971 9.890000e-66 261.0
47 TraesCS3B01G129100 chr7B 83.508 382 57 5 3216 3593 650302091 650302470 5.710000e-93 351.0
48 TraesCS3B01G129100 chr7B 82.812 384 57 8 3216 3593 650456863 650457243 5.750000e-88 335.0
49 TraesCS3B01G129100 chr7B 83.566 286 27 10 3 271 748453349 748453067 2.140000e-62 250.0
50 TraesCS3B01G129100 chr7B 97.143 35 0 1 7 41 253689246 253689213 1.390000e-04 58.4
51 TraesCS3B01G129100 chr2A 82.016 367 60 5 3231 3593 559673869 559674233 1.250000e-79 307.0
52 TraesCS3B01G129100 chr5A 81.462 383 59 12 3217 3593 69972824 69973200 1.620000e-78 303.0
53 TraesCS3B01G129100 chr4B 86.716 271 32 3 3 269 640830427 640830157 7.540000e-77 298.0
54 TraesCS3B01G129100 chr4B 82.918 281 31 12 3 269 484807751 484808028 1.670000e-58 237.0
55 TraesCS3B01G129100 chr4B 95.000 40 2 0 1 40 611671766 611671805 2.990000e-06 63.9
56 TraesCS3B01G129100 chr5D 83.764 271 36 6 8 272 281246937 281246669 2.140000e-62 250.0
57 TraesCS3B01G129100 chrUn 82.609 276 38 8 3 271 98133796 98133524 6.000000e-58 235.0
58 TraesCS3B01G129100 chrUn 96.970 33 1 0 3075 3107 35202954 35202922 5.010000e-04 56.5
59 TraesCS3B01G129100 chrUn 100.000 30 0 0 3075 3104 236914368 236914397 5.010000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G129100 chr3B 109859731 109863323 3592 True 6636.00 6636 100.000000 1 3593 1 chr3B.!!$R4 3592
1 TraesCS3B01G129100 chr3B 109796916 109797451 535 True 830.00 830 94.343000 2655 3202 1 chr3B.!!$R3 547
2 TraesCS3B01G129100 chr3D 66309022 66311545 2523 False 1692.50 2326 90.652000 276 2739 2 chr3D.!!$F1 2463
3 TraesCS3B01G129100 chr3D 66137656 66140733 3077 True 676.96 1679 93.090400 507 3195 5 chr3D.!!$R5 2688
4 TraesCS3B01G129100 chr3D 66146280 66147049 769 True 452.45 841 92.573500 745 2842 2 chr3D.!!$R6 2097
5 TraesCS3B01G129100 chr3D 66121851 66124737 2886 True 450.00 599 89.664333 1741 3203 3 chr3D.!!$R4 1462
6 TraesCS3B01G129100 chr3D 66260349 66260940 591 True 432.20 806 96.088000 1255 2431 2 chr3D.!!$R8 1176
7 TraesCS3B01G129100 chr3D 66251968 66252766 798 True 349.00 431 84.196500 2424 3195 2 chr3D.!!$R7 771
8 TraesCS3B01G129100 chr3A 77409289 77412202 2913 True 1169.00 2263 88.071333 456 3195 3 chr3A.!!$R1 2739
9 TraesCS3B01G129100 chr1B 660315977 660316666 689 False 405.00 405 77.794000 1679 2356 1 chr1B.!!$F1 677
10 TraesCS3B01G129100 chr1B 658469226 658470441 1215 False 313.85 549 83.148500 1363 2551 2 chr1B.!!$F2 1188
11 TraesCS3B01G129100 chr1D 473594304 473595512 1208 False 287.05 501 81.872000 1363 2541 2 chr1D.!!$F1 1178
12 TraesCS3B01G129100 chr1A 567814613 567815481 868 False 442.00 442 76.217000 1683 2551 1 chr1A.!!$F1 868
13 TraesCS3B01G129100 chr1A 567719892 567721104 1212 False 260.35 442 82.048000 1363 2551 2 chr1A.!!$F2 1188
14 TraesCS3B01G129100 chr1A 570614930 570615899 969 False 233.65 372 79.716500 1574 2493 2 chr1A.!!$F4 919

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
98 99 0.038526 GGACCGATTCACGCCGATAT 60.039 55.0 0.0 0.0 41.07 1.63 F
140 141 0.179067 GGCCGAATAATGGACCGACA 60.179 55.0 0.0 0.0 0.00 4.35 F
860 925 0.253327 GTCGCCTTCCTTCCTTCCAT 59.747 55.0 0.0 0.0 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1438 1583 0.103026 TCATCCACCATCTCGCTTCG 59.897 55.000 0.0 0.0 0.0 3.79 R
1477 1625 3.090532 GCCCTTCTCCCCCGTCAT 61.091 66.667 0.0 0.0 0.0 3.06 R
2796 3586 1.707106 TGTTGTGTCCTCCGAACCTA 58.293 50.000 0.0 0.0 0.0 3.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.991906 ATTTTCATTGATTTTCTGTGATGAACT 57.008 25.926 0.00 0.00 34.38 3.01
30 31 9.452287 TCATTGATTTTCTGTGATGAACTATGA 57.548 29.630 0.00 0.00 0.00 2.15
33 34 8.272545 TGATTTTCTGTGATGAACTATGAAGG 57.727 34.615 0.00 0.00 0.00 3.46
34 35 6.500684 TTTTCTGTGATGAACTATGAAGGC 57.499 37.500 0.00 0.00 0.00 4.35
35 36 4.824479 TCTGTGATGAACTATGAAGGCA 57.176 40.909 0.00 0.00 0.00 4.75
36 37 5.164620 TCTGTGATGAACTATGAAGGCAA 57.835 39.130 0.00 0.00 0.00 4.52
37 38 5.559770 TCTGTGATGAACTATGAAGGCAAA 58.440 37.500 0.00 0.00 0.00 3.68
38 39 6.003326 TCTGTGATGAACTATGAAGGCAAAA 58.997 36.000 0.00 0.00 0.00 2.44
39 40 6.489700 TCTGTGATGAACTATGAAGGCAAAAA 59.510 34.615 0.00 0.00 0.00 1.94
67 68 3.969795 GAAGAATTCACGCCGAACC 57.030 52.632 8.44 0.00 46.62 3.62
68 69 1.439679 GAAGAATTCACGCCGAACCT 58.560 50.000 8.44 0.00 46.62 3.50
69 70 1.393883 GAAGAATTCACGCCGAACCTC 59.606 52.381 8.44 0.00 46.62 3.85
70 71 0.736325 AGAATTCACGCCGAACCTCG 60.736 55.000 8.44 0.00 36.12 4.63
71 72 2.292802 GAATTCACGCCGAACCTCGC 62.293 60.000 0.00 0.00 38.82 5.03
75 76 4.612412 ACGCCGAACCTCGCCAAA 62.612 61.111 0.00 0.00 38.82 3.28
76 77 3.124921 CGCCGAACCTCGCCAAAT 61.125 61.111 0.00 0.00 38.82 2.32
77 78 1.812093 CGCCGAACCTCGCCAAATA 60.812 57.895 0.00 0.00 38.82 1.40
78 79 1.157870 CGCCGAACCTCGCCAAATAT 61.158 55.000 0.00 0.00 38.82 1.28
79 80 0.307760 GCCGAACCTCGCCAAATATG 59.692 55.000 0.00 0.00 38.82 1.78
92 93 3.253371 CAAATATGGACCGATTCACGC 57.747 47.619 0.00 0.00 41.07 5.34
93 94 1.878953 AATATGGACCGATTCACGCC 58.121 50.000 0.00 0.00 41.07 5.68
94 95 0.319555 ATATGGACCGATTCACGCCG 60.320 55.000 0.00 0.00 41.07 6.46
95 96 1.385756 TATGGACCGATTCACGCCGA 61.386 55.000 0.00 0.00 41.07 5.54
96 97 2.028125 ATGGACCGATTCACGCCGAT 62.028 55.000 0.00 0.00 41.07 4.18
97 98 1.361271 GGACCGATTCACGCCGATA 59.639 57.895 0.00 0.00 41.07 2.92
98 99 0.038526 GGACCGATTCACGCCGATAT 60.039 55.000 0.00 0.00 41.07 1.63
99 100 1.337821 GACCGATTCACGCCGATATC 58.662 55.000 0.00 0.00 41.07 1.63
100 101 0.386858 ACCGATTCACGCCGATATCG 60.387 55.000 18.31 18.31 41.07 2.92
114 115 3.288242 CGATATCGGGCAATTTTTGACG 58.712 45.455 17.51 0.00 40.53 4.35
115 116 3.001838 CGATATCGGGCAATTTTTGACGA 59.998 43.478 17.51 8.95 40.53 4.20
116 117 4.495019 CGATATCGGGCAATTTTTGACGAA 60.495 41.667 17.51 3.57 42.02 3.85
117 118 3.651803 ATCGGGCAATTTTTGACGAAA 57.348 38.095 10.08 0.00 42.02 3.46
118 119 3.006659 TCGGGCAATTTTTGACGAAAG 57.993 42.857 0.00 0.00 40.53 2.62
119 120 9.927304 CGATATCGGGCAATTTTTGACGAAAGT 62.927 40.741 17.51 2.67 42.02 2.66
130 131 3.940229 ACGAAAGTGGGCCGAATAA 57.060 47.368 0.00 0.00 46.97 1.40
131 132 2.413310 ACGAAAGTGGGCCGAATAAT 57.587 45.000 0.00 0.00 46.97 1.28
132 133 2.014128 ACGAAAGTGGGCCGAATAATG 58.986 47.619 0.00 0.00 46.97 1.90
133 134 1.333619 CGAAAGTGGGCCGAATAATGG 59.666 52.381 0.00 0.00 0.00 3.16
134 135 2.650322 GAAAGTGGGCCGAATAATGGA 58.350 47.619 0.00 0.00 0.00 3.41
135 136 2.052782 AAGTGGGCCGAATAATGGAC 57.947 50.000 0.00 0.00 0.00 4.02
139 140 2.613390 GGCCGAATAATGGACCGAC 58.387 57.895 0.00 0.00 0.00 4.79
140 141 0.179067 GGCCGAATAATGGACCGACA 60.179 55.000 0.00 0.00 0.00 4.35
141 142 1.542547 GGCCGAATAATGGACCGACAT 60.543 52.381 0.00 0.00 0.00 3.06
142 143 1.798813 GCCGAATAATGGACCGACATC 59.201 52.381 0.00 0.00 0.00 3.06
143 144 2.058798 CCGAATAATGGACCGACATCG 58.941 52.381 0.00 0.00 39.44 3.84
144 145 2.287970 CCGAATAATGGACCGACATCGA 60.288 50.000 2.09 0.00 43.02 3.59
145 146 3.575630 CGAATAATGGACCGACATCGAT 58.424 45.455 2.09 0.00 43.02 3.59
146 147 3.364920 CGAATAATGGACCGACATCGATG 59.635 47.826 23.68 23.68 43.02 3.84
147 148 2.148916 TAATGGACCGACATCGATGC 57.851 50.000 25.11 16.12 43.02 3.91
148 149 0.532862 AATGGACCGACATCGATGCC 60.533 55.000 25.11 17.28 43.02 4.40
149 150 1.402896 ATGGACCGACATCGATGCCT 61.403 55.000 25.11 6.78 43.02 4.75
150 151 0.753848 TGGACCGACATCGATGCCTA 60.754 55.000 25.11 5.00 43.02 3.93
151 152 0.387929 GGACCGACATCGATGCCTAA 59.612 55.000 25.11 0.00 43.02 2.69
152 153 1.202486 GGACCGACATCGATGCCTAAA 60.202 52.381 25.11 0.00 43.02 1.85
153 154 2.546778 GACCGACATCGATGCCTAAAA 58.453 47.619 25.11 0.00 43.02 1.52
154 155 2.540101 GACCGACATCGATGCCTAAAAG 59.460 50.000 25.11 9.52 43.02 2.27
155 156 1.261619 CCGACATCGATGCCTAAAAGC 59.738 52.381 25.11 4.09 43.02 3.51
156 157 1.071239 CGACATCGATGCCTAAAAGCG 60.071 52.381 25.11 11.57 43.02 4.68
157 158 2.201732 GACATCGATGCCTAAAAGCGA 58.798 47.619 25.11 0.00 34.65 4.93
158 159 1.933853 ACATCGATGCCTAAAAGCGAC 59.066 47.619 25.11 0.00 33.52 5.19
159 160 1.261619 CATCGATGCCTAAAAGCGACC 59.738 52.381 13.37 0.00 33.52 4.79
160 161 0.461339 TCGATGCCTAAAAGCGACCC 60.461 55.000 0.00 0.00 34.65 4.46
161 162 0.742990 CGATGCCTAAAAGCGACCCA 60.743 55.000 0.00 0.00 34.65 4.51
162 163 1.017387 GATGCCTAAAAGCGACCCAG 58.983 55.000 0.00 0.00 34.65 4.45
163 164 0.394352 ATGCCTAAAAGCGACCCAGG 60.394 55.000 0.00 0.00 34.65 4.45
164 165 1.749258 GCCTAAAAGCGACCCAGGG 60.749 63.158 2.85 2.85 0.00 4.45
165 166 1.683441 CCTAAAAGCGACCCAGGGT 59.317 57.895 12.53 12.53 39.44 4.34
173 174 2.675772 GACCCAGGGTCGACGACT 60.676 66.667 23.67 7.55 43.14 4.18
174 175 2.989824 ACCCAGGGTCGACGACTG 60.990 66.667 25.87 24.04 32.47 3.51
176 177 3.760035 CCAGGGTCGACGACTGGG 61.760 72.222 33.52 21.97 46.24 4.45
177 178 2.989824 CAGGGTCGACGACTGGGT 60.990 66.667 25.87 6.98 32.47 4.51
178 179 2.989824 AGGGTCGACGACTGGGTG 60.990 66.667 25.87 0.00 32.47 4.61
179 180 4.736896 GGGTCGACGACTGGGTGC 62.737 72.222 25.87 9.28 32.47 5.01
180 181 4.736896 GGTCGACGACTGGGTGCC 62.737 72.222 25.87 5.32 32.47 5.01
181 182 4.736896 GTCGACGACTGGGTGCCC 62.737 72.222 20.52 0.00 0.00 5.36
183 184 4.308458 CGACGACTGGGTGCCCAA 62.308 66.667 11.54 0.00 46.63 4.12
184 185 2.668550 GACGACTGGGTGCCCAAC 60.669 66.667 11.54 7.58 46.63 3.77
202 203 4.489771 CGCCCCCAGAGCCGATTT 62.490 66.667 0.00 0.00 0.00 2.17
203 204 2.043953 GCCCCCAGAGCCGATTTT 60.044 61.111 0.00 0.00 0.00 1.82
204 205 2.418083 GCCCCCAGAGCCGATTTTG 61.418 63.158 0.00 0.00 0.00 2.44
205 206 2.418083 CCCCCAGAGCCGATTTTGC 61.418 63.158 0.00 0.00 0.00 3.68
206 207 2.418083 CCCCAGAGCCGATTTTGCC 61.418 63.158 0.00 0.00 0.00 4.52
207 208 2.764314 CCCAGAGCCGATTTTGCCG 61.764 63.158 0.00 0.00 0.00 5.69
208 209 2.100991 CAGAGCCGATTTTGCCGC 59.899 61.111 0.00 0.00 0.00 6.53
209 210 2.045926 AGAGCCGATTTTGCCGCT 60.046 55.556 0.00 0.00 0.00 5.52
210 211 2.100991 GAGCCGATTTTGCCGCTG 59.899 61.111 0.00 0.00 0.00 5.18
211 212 3.401243 GAGCCGATTTTGCCGCTGG 62.401 63.158 0.00 0.00 0.00 4.85
233 234 3.590824 CCTTCAGGCGGCGATTTT 58.409 55.556 12.98 0.00 0.00 1.82
234 235 1.883021 CCTTCAGGCGGCGATTTTT 59.117 52.632 12.98 0.00 0.00 1.94
235 236 1.091537 CCTTCAGGCGGCGATTTTTA 58.908 50.000 12.98 0.00 0.00 1.52
236 237 1.676006 CCTTCAGGCGGCGATTTTTAT 59.324 47.619 12.98 0.00 0.00 1.40
237 238 2.541588 CCTTCAGGCGGCGATTTTTATG 60.542 50.000 12.98 0.00 0.00 1.90
238 239 0.380378 TCAGGCGGCGATTTTTATGC 59.620 50.000 12.98 0.00 0.00 3.14
239 240 0.594796 CAGGCGGCGATTTTTATGCC 60.595 55.000 12.98 0.00 45.39 4.40
240 241 1.733526 GGCGGCGATTTTTATGCCT 59.266 52.632 12.98 0.00 46.67 4.75
241 242 0.317854 GGCGGCGATTTTTATGCCTC 60.318 55.000 12.98 0.00 46.67 4.70
242 243 0.317854 GCGGCGATTTTTATGCCTCC 60.318 55.000 12.98 0.00 46.67 4.30
243 244 1.308998 CGGCGATTTTTATGCCTCCT 58.691 50.000 0.00 0.00 46.67 3.69
244 245 1.002468 CGGCGATTTTTATGCCTCCTG 60.002 52.381 0.00 0.00 46.67 3.86
245 246 1.338020 GGCGATTTTTATGCCTCCTGG 59.662 52.381 0.00 0.00 45.40 4.45
246 247 1.338020 GCGATTTTTATGCCTCCTGGG 59.662 52.381 0.00 0.00 38.36 4.45
247 248 1.956477 CGATTTTTATGCCTCCTGGGG 59.044 52.381 0.00 0.00 35.12 4.96
248 249 2.319844 GATTTTTATGCCTCCTGGGGG 58.680 52.381 8.74 8.74 35.12 5.40
256 257 4.410400 CTCCTGGGGGCCAACGAC 62.410 72.222 4.39 0.00 30.80 4.34
257 258 4.974438 TCCTGGGGGCCAACGACT 62.974 66.667 4.39 0.00 30.80 4.18
258 259 4.722700 CCTGGGGGCCAACGACTG 62.723 72.222 4.39 0.00 30.80 3.51
269 270 2.376808 CAACGACTGGAGATGCTCTT 57.623 50.000 0.00 0.00 0.00 2.85
270 271 3.510388 CAACGACTGGAGATGCTCTTA 57.490 47.619 0.00 0.00 0.00 2.10
271 272 4.052159 CAACGACTGGAGATGCTCTTAT 57.948 45.455 0.00 0.00 0.00 1.73
272 273 3.724508 ACGACTGGAGATGCTCTTATG 57.275 47.619 0.00 0.00 0.00 1.90
273 274 2.223923 ACGACTGGAGATGCTCTTATGC 60.224 50.000 0.00 0.00 0.00 3.14
274 275 2.035704 CGACTGGAGATGCTCTTATGCT 59.964 50.000 0.00 0.00 0.00 3.79
310 311 4.210746 CGAGAATGATGTTCTGCACATAGG 59.789 45.833 0.00 0.00 46.96 2.57
325 326 3.063997 CACATAGGACAATTCTTCACGGC 59.936 47.826 0.00 0.00 0.00 5.68
349 350 1.830279 TCACGACCTACATCTTCGGT 58.170 50.000 0.00 0.00 37.07 4.69
350 351 2.989909 TCACGACCTACATCTTCGGTA 58.010 47.619 0.00 0.00 37.07 4.02
351 352 2.679837 TCACGACCTACATCTTCGGTAC 59.320 50.000 0.00 0.00 37.07 3.34
352 353 2.019984 ACGACCTACATCTTCGGTACC 58.980 52.381 0.16 0.16 37.07 3.34
354 355 2.381911 GACCTACATCTTCGGTACCCA 58.618 52.381 6.25 0.00 0.00 4.51
355 356 2.762327 GACCTACATCTTCGGTACCCAA 59.238 50.000 6.25 0.00 0.00 4.12
373 374 5.755849 ACCCAACCCAAATATCTCTTACAG 58.244 41.667 0.00 0.00 0.00 2.74
375 376 5.440610 CCAACCCAAATATCTCTTACAGCT 58.559 41.667 0.00 0.00 0.00 4.24
417 418 8.692615 GCAATAAAAGAGCTACTTATACTCGTC 58.307 37.037 0.00 0.00 37.93 4.20
424 425 6.093219 AGAGCTACTTATACTCGTCGACAAAA 59.907 38.462 17.16 0.00 35.56 2.44
447 448 7.975866 AACAATTATTCAATGAATGAGCGTC 57.024 32.000 17.93 0.00 39.77 5.19
459 460 4.153296 TGAATGAGCGTCGCATTTCTTTTA 59.847 37.500 21.09 6.93 34.31 1.52
494 498 7.031372 TGTGAAAGCATATCTTTTTCATCTGC 58.969 34.615 8.30 0.00 44.58 4.26
595 632 9.295214 CGGCACAACATTTGAATAAACATAATA 57.705 29.630 0.00 0.00 0.00 0.98
705 753 0.881118 CAACGGACCAATCACCCAAG 59.119 55.000 0.00 0.00 0.00 3.61
859 924 1.677552 GTCGCCTTCCTTCCTTCCA 59.322 57.895 0.00 0.00 0.00 3.53
860 925 0.253327 GTCGCCTTCCTTCCTTCCAT 59.747 55.000 0.00 0.00 0.00 3.41
861 926 0.541863 TCGCCTTCCTTCCTTCCATC 59.458 55.000 0.00 0.00 0.00 3.51
862 927 0.464554 CGCCTTCCTTCCTTCCATCC 60.465 60.000 0.00 0.00 0.00 3.51
937 1030 1.272203 TGCTCCTCTTCGTCTCTTCCT 60.272 52.381 0.00 0.00 0.00 3.36
954 1052 1.062581 TCCTTCTCCTCCATCTCCCAG 60.063 57.143 0.00 0.00 0.00 4.45
955 1053 1.343884 CCTTCTCCTCCATCTCCCAGT 60.344 57.143 0.00 0.00 0.00 4.00
1042 1148 1.522569 GGGTCGCAGCACTATTCCT 59.477 57.895 0.00 0.00 0.00 3.36
1319 1461 3.064324 GGTGCAGGGCATGGTCAC 61.064 66.667 0.00 1.03 41.91 3.67
1338 1480 1.915266 CCTGGGAGCTGAGTGGACA 60.915 63.158 0.00 0.00 0.00 4.02
1438 1583 3.119096 GGAGCAACGAAGACGGCC 61.119 66.667 0.00 0.00 44.46 6.13
2256 2855 4.578898 ACGTGGACGCAGCACGAA 62.579 61.111 9.77 0.00 44.46 3.85
2309 2909 2.962786 CGTGACCGCGTTCCACAA 60.963 61.111 18.23 0.00 0.00 3.33
2546 3189 1.448540 GAGACACCATCGCCCACAG 60.449 63.158 0.00 0.00 0.00 3.66
2599 3245 4.547671 TGGGTCTTTCTACTAGCAGCTAT 58.452 43.478 1.54 0.00 0.00 2.97
2600 3246 5.702266 TGGGTCTTTCTACTAGCAGCTATA 58.298 41.667 1.54 0.00 0.00 1.31
2601 3247 5.770663 TGGGTCTTTCTACTAGCAGCTATAG 59.229 44.000 1.54 7.43 0.00 1.31
2602 3248 5.771165 GGGTCTTTCTACTAGCAGCTATAGT 59.229 44.000 13.61 13.61 37.29 2.12
2603 3249 6.941436 GGGTCTTTCTACTAGCAGCTATAGTA 59.059 42.308 1.54 14.23 35.20 1.82
2626 3281 6.590234 ATTACCTGTTTCATTTCTTGACCC 57.410 37.500 0.00 0.00 32.84 4.46
2709 3379 3.569701 TCATTGGTTCTTTTGCTGGACTC 59.430 43.478 0.00 0.00 0.00 3.36
2783 3573 1.228533 TACCGGGCAACGTTTTCTTC 58.771 50.000 6.32 0.00 42.24 2.87
2784 3574 1.082366 CCGGGCAACGTTTTCTTCG 60.082 57.895 0.00 0.00 42.24 3.79
2789 3579 2.924926 GGGCAACGTTTTCTTCGTTTTT 59.075 40.909 0.00 0.00 46.90 1.94
2790 3580 4.104066 GGGCAACGTTTTCTTCGTTTTTA 58.896 39.130 0.00 0.00 46.90 1.52
2791 3581 4.027458 GGGCAACGTTTTCTTCGTTTTTAC 60.027 41.667 0.00 0.00 46.90 2.01
2792 3582 4.794762 GGCAACGTTTTCTTCGTTTTTACT 59.205 37.500 0.00 0.00 46.90 2.24
2793 3583 5.286797 GGCAACGTTTTCTTCGTTTTTACTT 59.713 36.000 0.00 0.00 46.90 2.24
2794 3584 6.183360 GGCAACGTTTTCTTCGTTTTTACTTT 60.183 34.615 0.00 0.00 46.90 2.66
2795 3585 7.221970 GCAACGTTTTCTTCGTTTTTACTTTT 58.778 30.769 0.00 0.00 46.90 2.27
2796 3586 7.736880 GCAACGTTTTCTTCGTTTTTACTTTTT 59.263 29.630 0.00 0.00 46.90 1.94
2803 3593 8.825064 TTCTTCGTTTTTACTTTTTAGGTTCG 57.175 30.769 0.00 0.00 0.00 3.95
2814 3604 2.825861 TTAGGTTCGGAGGACACAAC 57.174 50.000 0.00 0.00 0.00 3.32
2845 3643 8.522830 TGGTTTGAGATATTGGAAAGATGTTTC 58.477 33.333 6.79 6.79 41.35 2.78
2902 3724 7.041635 TGTATATCACCATCAATTTTGCCAG 57.958 36.000 0.00 0.00 0.00 4.85
2913 3735 4.517075 TCAATTTTGCCAGACGTTGTATCA 59.483 37.500 0.00 0.00 0.00 2.15
2916 3738 4.418013 TTTGCCAGACGTTGTATCATTG 57.582 40.909 0.00 0.00 0.00 2.82
2940 3762 3.509442 TCATTTTGCCATCCAAGACCTT 58.491 40.909 0.00 0.00 34.34 3.50
2941 3763 4.671831 TCATTTTGCCATCCAAGACCTTA 58.328 39.130 0.00 0.00 34.34 2.69
2942 3764 5.083122 TCATTTTGCCATCCAAGACCTTAA 58.917 37.500 0.00 0.00 34.34 1.85
2943 3765 5.721000 TCATTTTGCCATCCAAGACCTTAAT 59.279 36.000 0.00 0.00 34.34 1.40
3029 5389 7.148573 CGAAACTCTGATTATGCAAGTACAACT 60.149 37.037 0.00 0.00 0.00 3.16
3111 5504 7.990886 ACATTTTGATACGGAGGTTATACATGT 59.009 33.333 2.69 2.69 0.00 3.21
3188 5583 3.182967 CTCGTGGCTGAACTATCAACTC 58.817 50.000 0.00 0.00 34.49 3.01
3203 5598 5.574891 ATCAACTCTAGCTATGCTATCGG 57.425 43.478 0.00 0.00 40.54 4.18
3204 5599 4.652822 TCAACTCTAGCTATGCTATCGGA 58.347 43.478 0.00 0.00 40.54 4.55
3205 5600 4.697828 TCAACTCTAGCTATGCTATCGGAG 59.302 45.833 0.00 10.67 40.54 4.63
3206 5601 4.295141 ACTCTAGCTATGCTATCGGAGT 57.705 45.455 11.60 11.60 40.54 3.85
3207 5602 5.423704 ACTCTAGCTATGCTATCGGAGTA 57.576 43.478 14.23 0.00 40.15 2.59
3208 5603 5.180271 ACTCTAGCTATGCTATCGGAGTAC 58.820 45.833 14.23 0.00 40.15 2.73
3209 5604 5.046159 ACTCTAGCTATGCTATCGGAGTACT 60.046 44.000 14.23 0.00 40.15 2.73
3210 5605 5.806818 TCTAGCTATGCTATCGGAGTACTT 58.193 41.667 0.00 0.00 40.54 2.24
3211 5606 5.875910 TCTAGCTATGCTATCGGAGTACTTC 59.124 44.000 0.00 0.00 40.54 3.01
3212 5607 4.399219 AGCTATGCTATCGGAGTACTTCA 58.601 43.478 1.17 0.00 36.99 3.02
3213 5608 4.827835 AGCTATGCTATCGGAGTACTTCAA 59.172 41.667 1.17 0.00 36.99 2.69
3214 5609 5.048364 AGCTATGCTATCGGAGTACTTCAAG 60.048 44.000 1.17 0.00 36.99 3.02
3215 5610 4.592485 ATGCTATCGGAGTACTTCAAGG 57.408 45.455 1.17 0.00 0.00 3.61
3216 5611 3.628008 TGCTATCGGAGTACTTCAAGGA 58.372 45.455 1.17 0.00 0.00 3.36
3217 5612 4.215908 TGCTATCGGAGTACTTCAAGGAT 58.784 43.478 1.17 0.00 0.00 3.24
3218 5613 4.038042 TGCTATCGGAGTACTTCAAGGATG 59.962 45.833 1.17 0.00 0.00 3.51
3219 5614 4.278669 GCTATCGGAGTACTTCAAGGATGA 59.721 45.833 1.17 0.00 0.00 2.92
3220 5615 4.927978 ATCGGAGTACTTCAAGGATGAG 57.072 45.455 1.17 0.00 36.78 2.90
3221 5616 3.024547 TCGGAGTACTTCAAGGATGAGG 58.975 50.000 1.17 0.00 38.54 3.86
3222 5617 2.482142 CGGAGTACTTCAAGGATGAGGC 60.482 54.545 1.17 0.00 36.17 4.70
3223 5618 2.482142 GGAGTACTTCAAGGATGAGGCG 60.482 54.545 0.00 0.00 36.17 5.52
3224 5619 2.166664 GAGTACTTCAAGGATGAGGCGT 59.833 50.000 0.00 0.00 36.17 5.68
3225 5620 3.362706 AGTACTTCAAGGATGAGGCGTA 58.637 45.455 0.00 0.00 36.17 4.42
3226 5621 3.961408 AGTACTTCAAGGATGAGGCGTAT 59.039 43.478 0.00 0.00 36.17 3.06
3227 5622 3.185246 ACTTCAAGGATGAGGCGTATG 57.815 47.619 0.00 0.00 36.17 2.39
3228 5623 2.158900 ACTTCAAGGATGAGGCGTATGG 60.159 50.000 0.00 0.00 36.17 2.74
3229 5624 0.106708 TCAAGGATGAGGCGTATGGC 59.893 55.000 0.00 0.00 42.51 4.40
3240 5635 3.936203 GTATGGCGGGGGCGATCA 61.936 66.667 0.00 0.00 0.00 2.92
3241 5636 3.164977 TATGGCGGGGGCGATCAA 61.165 61.111 0.00 0.00 0.00 2.57
3242 5637 3.177194 TATGGCGGGGGCGATCAAG 62.177 63.158 0.00 0.00 0.00 3.02
3281 5676 2.522503 CCATCATTGGCCGGGGAT 59.477 61.111 2.18 0.00 35.85 3.85
3282 5677 1.604593 CCATCATTGGCCGGGGATC 60.605 63.158 2.18 0.00 35.85 3.36
3283 5678 1.968017 CATCATTGGCCGGGGATCG 60.968 63.158 2.18 0.00 38.88 3.69
3284 5679 3.850098 ATCATTGGCCGGGGATCGC 62.850 63.158 2.18 0.06 37.59 4.58
3316 5711 3.373565 CCGGTTTTGGGCTCTGGC 61.374 66.667 0.00 0.00 37.82 4.85
3317 5712 2.597217 CGGTTTTGGGCTCTGGCA 60.597 61.111 0.00 0.00 40.87 4.92
3318 5713 2.629656 CGGTTTTGGGCTCTGGCAG 61.630 63.158 8.58 8.58 40.87 4.85
3319 5714 1.228552 GGTTTTGGGCTCTGGCAGA 60.229 57.895 17.68 17.68 40.87 4.26
3320 5715 1.246737 GGTTTTGGGCTCTGGCAGAG 61.247 60.000 34.76 34.76 45.04 3.35
3321 5716 0.538287 GTTTTGGGCTCTGGCAGAGT 60.538 55.000 37.14 0.00 44.12 3.24
3322 5717 0.250901 TTTTGGGCTCTGGCAGAGTC 60.251 55.000 37.14 36.22 45.88 3.36
3325 5720 3.071206 GGCTCTGGCAGAGTCCGA 61.071 66.667 37.14 8.92 40.97 4.55
3326 5721 2.430610 GGCTCTGGCAGAGTCCGAT 61.431 63.158 37.14 0.00 40.97 4.18
3327 5722 1.227205 GCTCTGGCAGAGTCCGATG 60.227 63.158 37.14 17.83 44.12 3.84
3328 5723 1.670949 GCTCTGGCAGAGTCCGATGA 61.671 60.000 37.14 6.74 44.12 2.92
3329 5724 0.385029 CTCTGGCAGAGTCCGATGAG 59.615 60.000 31.73 8.18 37.57 2.90
3330 5725 1.039785 TCTGGCAGAGTCCGATGAGG 61.040 60.000 14.43 0.00 42.97 3.86
3338 5733 3.184206 TCCGATGAGGACGACGTG 58.816 61.111 4.58 0.00 45.98 4.49
3339 5734 2.102357 CCGATGAGGACGACGTGG 59.898 66.667 4.58 0.00 45.00 4.94
3340 5735 2.404186 CCGATGAGGACGACGTGGA 61.404 63.158 4.58 0.00 45.00 4.02
3341 5736 1.226323 CGATGAGGACGACGTGGAC 60.226 63.158 4.58 0.00 0.00 4.02
3342 5737 1.226323 GATGAGGACGACGTGGACG 60.226 63.158 4.58 0.00 46.33 4.79
3343 5738 1.642037 GATGAGGACGACGTGGACGA 61.642 60.000 4.58 0.00 43.02 4.20
3344 5739 1.645704 ATGAGGACGACGTGGACGAG 61.646 60.000 4.58 2.27 43.02 4.18
3345 5740 3.036783 GAGGACGACGTGGACGAGG 62.037 68.421 4.58 0.00 43.02 4.63
3346 5741 3.052082 GGACGACGTGGACGAGGA 61.052 66.667 4.58 0.00 43.02 3.71
3347 5742 2.404995 GGACGACGTGGACGAGGAT 61.405 63.158 4.58 0.00 43.02 3.24
3348 5743 1.226323 GACGACGTGGACGAGGATG 60.226 63.158 4.58 0.00 43.02 3.51
3349 5744 2.102357 CGACGTGGACGAGGATGG 59.898 66.667 6.12 0.00 43.02 3.51
3350 5745 2.494918 GACGTGGACGAGGATGGG 59.505 66.667 6.12 0.00 43.02 4.00
3351 5746 3.075005 ACGTGGACGAGGATGGGG 61.075 66.667 6.12 0.00 43.02 4.96
3352 5747 2.758327 CGTGGACGAGGATGGGGA 60.758 66.667 0.00 0.00 43.02 4.81
3353 5748 2.901042 GTGGACGAGGATGGGGAC 59.099 66.667 0.00 0.00 0.00 4.46
3354 5749 1.686110 GTGGACGAGGATGGGGACT 60.686 63.158 0.00 0.00 0.00 3.85
3355 5750 1.381327 TGGACGAGGATGGGGACTC 60.381 63.158 0.00 0.00 0.00 3.36
3356 5751 2.491022 GGACGAGGATGGGGACTCG 61.491 68.421 11.94 11.94 43.89 4.18
3357 5752 3.140225 GACGAGGATGGGGACTCGC 62.140 68.421 13.25 3.91 42.30 5.03
3358 5753 3.917760 CGAGGATGGGGACTCGCC 61.918 72.222 5.15 5.15 36.97 5.54
3359 5754 3.917760 GAGGATGGGGACTCGCCG 61.918 72.222 7.59 0.00 39.47 6.46
3378 5773 3.878519 CGACCTCTCCGGCGTCTC 61.879 72.222 6.01 0.00 35.61 3.36
3379 5774 2.438795 GACCTCTCCGGCGTCTCT 60.439 66.667 6.01 0.00 35.61 3.10
3380 5775 2.752238 ACCTCTCCGGCGTCTCTG 60.752 66.667 6.01 0.00 35.61 3.35
3381 5776 2.438614 CCTCTCCGGCGTCTCTGA 60.439 66.667 6.01 0.00 0.00 3.27
3382 5777 2.766400 CCTCTCCGGCGTCTCTGAC 61.766 68.421 6.01 0.00 0.00 3.51
3383 5778 2.750637 TCTCCGGCGTCTCTGACC 60.751 66.667 6.01 0.00 0.00 4.02
3384 5779 3.827898 CTCCGGCGTCTCTGACCC 61.828 72.222 6.01 0.00 0.00 4.46
3387 5782 3.382832 CGGCGTCTCTGACCCCTT 61.383 66.667 0.00 0.00 29.11 3.95
3388 5783 2.579738 GGCGTCTCTGACCCCTTC 59.420 66.667 0.00 0.00 28.78 3.46
3389 5784 2.579738 GCGTCTCTGACCCCTTCC 59.420 66.667 0.00 0.00 0.00 3.46
3390 5785 2.885861 CGTCTCTGACCCCTTCCG 59.114 66.667 0.00 0.00 0.00 4.30
3391 5786 1.677966 CGTCTCTGACCCCTTCCGA 60.678 63.158 0.00 0.00 0.00 4.55
3392 5787 1.038130 CGTCTCTGACCCCTTCCGAT 61.038 60.000 0.00 0.00 0.00 4.18
3393 5788 0.747852 GTCTCTGACCCCTTCCGATC 59.252 60.000 0.00 0.00 0.00 3.69
3394 5789 0.631753 TCTCTGACCCCTTCCGATCT 59.368 55.000 0.00 0.00 0.00 2.75
3395 5790 1.036707 CTCTGACCCCTTCCGATCTC 58.963 60.000 0.00 0.00 0.00 2.75
3396 5791 0.335019 TCTGACCCCTTCCGATCTCA 59.665 55.000 0.00 0.00 0.00 3.27
3397 5792 1.062886 TCTGACCCCTTCCGATCTCAT 60.063 52.381 0.00 0.00 0.00 2.90
3398 5793 1.342819 CTGACCCCTTCCGATCTCATC 59.657 57.143 0.00 0.00 0.00 2.92
3399 5794 1.062886 TGACCCCTTCCGATCTCATCT 60.063 52.381 0.00 0.00 0.00 2.90
3400 5795 2.177016 TGACCCCTTCCGATCTCATCTA 59.823 50.000 0.00 0.00 0.00 1.98
3401 5796 3.181417 TGACCCCTTCCGATCTCATCTAT 60.181 47.826 0.00 0.00 0.00 1.98
3402 5797 3.169099 ACCCCTTCCGATCTCATCTATG 58.831 50.000 0.00 0.00 0.00 2.23
3403 5798 3.181417 ACCCCTTCCGATCTCATCTATGA 60.181 47.826 0.00 0.00 35.16 2.15
3417 5812 6.925610 TCATCTATGAGTTTTCCAATTCCG 57.074 37.500 0.00 0.00 32.11 4.30
3418 5813 5.822519 TCATCTATGAGTTTTCCAATTCCGG 59.177 40.000 0.00 0.00 32.11 5.14
3419 5814 4.523083 TCTATGAGTTTTCCAATTCCGGG 58.477 43.478 0.00 0.00 0.00 5.73
3420 5815 2.668144 TGAGTTTTCCAATTCCGGGT 57.332 45.000 0.00 0.00 0.00 5.28
3421 5816 3.791953 TGAGTTTTCCAATTCCGGGTA 57.208 42.857 0.00 0.00 0.00 3.69
3422 5817 3.414269 TGAGTTTTCCAATTCCGGGTAC 58.586 45.455 0.00 0.00 0.00 3.34
3423 5818 2.417586 GAGTTTTCCAATTCCGGGTACG 59.582 50.000 0.00 0.00 40.55 3.67
3424 5819 2.038820 AGTTTTCCAATTCCGGGTACGA 59.961 45.455 0.00 0.00 44.60 3.43
3425 5820 2.097680 TTTCCAATTCCGGGTACGAC 57.902 50.000 0.00 0.00 44.60 4.34
3426 5821 0.108709 TTCCAATTCCGGGTACGACG 60.109 55.000 0.00 0.00 44.60 5.12
3427 5822 0.964860 TCCAATTCCGGGTACGACGA 60.965 55.000 0.00 0.00 44.60 4.20
3428 5823 0.108709 CCAATTCCGGGTACGACGAA 60.109 55.000 0.00 0.57 44.60 3.85
3429 5824 1.274596 CAATTCCGGGTACGACGAAG 58.725 55.000 0.00 0.00 44.60 3.79
3430 5825 1.135315 CAATTCCGGGTACGACGAAGA 60.135 52.381 0.00 0.00 44.60 2.87
3431 5826 1.396653 ATTCCGGGTACGACGAAGAT 58.603 50.000 0.00 0.00 44.60 2.40
3432 5827 0.452987 TTCCGGGTACGACGAAGATG 59.547 55.000 0.00 0.00 44.60 2.90
3433 5828 0.392863 TCCGGGTACGACGAAGATGA 60.393 55.000 0.00 0.00 44.60 2.92
3434 5829 0.666913 CCGGGTACGACGAAGATGAT 59.333 55.000 0.00 0.00 44.60 2.45
3435 5830 1.599667 CCGGGTACGACGAAGATGATG 60.600 57.143 0.00 0.00 44.60 3.07
3436 5831 1.065102 CGGGTACGACGAAGATGATGT 59.935 52.381 0.00 0.00 44.60 3.06
3437 5832 2.460918 GGGTACGACGAAGATGATGTG 58.539 52.381 0.00 0.00 0.00 3.21
3438 5833 2.460918 GGTACGACGAAGATGATGTGG 58.539 52.381 0.00 0.00 0.00 4.17
3439 5834 1.852895 GTACGACGAAGATGATGTGGC 59.147 52.381 0.00 0.00 0.00 5.01
3440 5835 0.246360 ACGACGAAGATGATGTGGCA 59.754 50.000 0.00 0.00 0.00 4.92
3441 5836 1.337728 ACGACGAAGATGATGTGGCAA 60.338 47.619 0.00 0.00 0.00 4.52
3442 5837 1.061131 CGACGAAGATGATGTGGCAAC 59.939 52.381 0.00 0.00 0.00 4.17
3443 5838 1.061131 GACGAAGATGATGTGGCAACG 59.939 52.381 0.00 0.00 42.51 4.10
3444 5839 1.337728 ACGAAGATGATGTGGCAACGA 60.338 47.619 0.00 0.00 42.51 3.85
3445 5840 1.061131 CGAAGATGATGTGGCAACGAC 59.939 52.381 0.00 0.00 42.51 4.34
3446 5841 1.061131 GAAGATGATGTGGCAACGACG 59.939 52.381 0.00 0.00 42.51 5.12
3447 5842 0.740868 AGATGATGTGGCAACGACGG 60.741 55.000 0.00 0.00 42.51 4.79
3448 5843 1.003839 ATGATGTGGCAACGACGGT 60.004 52.632 0.00 0.00 42.51 4.83
3449 5844 1.019278 ATGATGTGGCAACGACGGTC 61.019 55.000 0.00 0.00 42.51 4.79
3450 5845 2.726691 GATGTGGCAACGACGGTCG 61.727 63.158 27.33 27.33 46.93 4.79
3451 5846 3.215597 ATGTGGCAACGACGGTCGA 62.216 57.895 34.40 12.61 43.74 4.20
3452 5847 2.431942 GTGGCAACGACGGTCGAT 60.432 61.111 34.40 22.02 43.74 3.59
3453 5848 2.431771 TGGCAACGACGGTCGATG 60.432 61.111 34.40 31.52 43.74 3.84
3454 5849 2.126228 GGCAACGACGGTCGATGA 60.126 61.111 34.85 0.00 43.94 2.92
3455 5850 1.735198 GGCAACGACGGTCGATGAA 60.735 57.895 34.85 0.00 43.94 2.57
3456 5851 1.683790 GGCAACGACGGTCGATGAAG 61.684 60.000 34.85 20.59 43.94 3.02
3457 5852 1.007336 GCAACGACGGTCGATGAAGT 61.007 55.000 34.85 13.20 43.94 3.01
3458 5853 0.982673 CAACGACGGTCGATGAAGTC 59.017 55.000 34.40 0.00 43.94 3.01
3459 5854 0.879765 AACGACGGTCGATGAAGTCT 59.120 50.000 34.40 8.82 43.74 3.24
3460 5855 0.879765 ACGACGGTCGATGAAGTCTT 59.120 50.000 34.40 8.08 43.74 3.01
3461 5856 1.260206 CGACGGTCGATGAAGTCTTG 58.740 55.000 25.29 0.00 43.74 3.02
3462 5857 0.992802 GACGGTCGATGAAGTCTTGC 59.007 55.000 0.00 0.00 0.00 4.01
3463 5858 0.389948 ACGGTCGATGAAGTCTTGCC 60.390 55.000 0.00 0.00 0.00 4.52
3464 5859 0.389817 CGGTCGATGAAGTCTTGCCA 60.390 55.000 0.00 0.00 0.00 4.92
3465 5860 1.079503 GGTCGATGAAGTCTTGCCAC 58.920 55.000 0.00 0.00 0.00 5.01
3466 5861 1.079503 GTCGATGAAGTCTTGCCACC 58.920 55.000 0.00 0.00 0.00 4.61
3467 5862 0.036388 TCGATGAAGTCTTGCCACCC 60.036 55.000 0.00 0.00 0.00 4.61
3468 5863 0.321564 CGATGAAGTCTTGCCACCCA 60.322 55.000 0.00 0.00 0.00 4.51
3469 5864 1.881925 CGATGAAGTCTTGCCACCCAA 60.882 52.381 0.00 0.00 0.00 4.12
3470 5865 1.541588 GATGAAGTCTTGCCACCCAAC 59.458 52.381 0.00 0.00 0.00 3.77
3471 5866 0.550914 TGAAGTCTTGCCACCCAACT 59.449 50.000 0.00 0.00 0.00 3.16
3472 5867 1.771854 TGAAGTCTTGCCACCCAACTA 59.228 47.619 0.00 0.00 0.00 2.24
3473 5868 2.375174 TGAAGTCTTGCCACCCAACTAT 59.625 45.455 0.00 0.00 0.00 2.12
3474 5869 2.789409 AGTCTTGCCACCCAACTATC 57.211 50.000 0.00 0.00 0.00 2.08
3475 5870 1.282157 AGTCTTGCCACCCAACTATCC 59.718 52.381 0.00 0.00 0.00 2.59
3476 5871 0.251916 TCTTGCCACCCAACTATCCG 59.748 55.000 0.00 0.00 0.00 4.18
3477 5872 0.748005 CTTGCCACCCAACTATCCGG 60.748 60.000 0.00 0.00 0.00 5.14
3478 5873 2.516225 GCCACCCAACTATCCGGC 60.516 66.667 0.00 0.00 0.00 6.13
3479 5874 2.192175 CCACCCAACTATCCGGCC 59.808 66.667 0.00 0.00 0.00 6.13
3480 5875 2.675242 CCACCCAACTATCCGGCCA 61.675 63.158 2.24 0.00 0.00 5.36
3481 5876 1.153168 CACCCAACTATCCGGCCAG 60.153 63.158 2.24 0.00 0.00 4.85
3482 5877 1.306654 ACCCAACTATCCGGCCAGA 60.307 57.895 2.24 0.00 0.00 3.86
3483 5878 1.146263 CCCAACTATCCGGCCAGAC 59.854 63.158 2.24 0.00 0.00 3.51
3484 5879 1.338136 CCCAACTATCCGGCCAGACT 61.338 60.000 2.24 0.00 0.00 3.24
3485 5880 0.541863 CCAACTATCCGGCCAGACTT 59.458 55.000 2.24 0.00 0.00 3.01
3486 5881 1.656652 CAACTATCCGGCCAGACTTG 58.343 55.000 2.24 0.00 0.00 3.16
3488 5883 1.338136 ACTATCCGGCCAGACTTGGG 61.338 60.000 2.24 0.00 45.16 4.12
3496 5891 2.187073 CCAGACTTGGGCTTCATGC 58.813 57.895 0.00 0.00 41.05 4.06
3497 5892 1.651240 CCAGACTTGGGCTTCATGCG 61.651 60.000 0.00 0.00 44.05 4.73
3498 5893 1.377725 AGACTTGGGCTTCATGCGG 60.378 57.895 0.00 0.00 44.05 5.69
3499 5894 2.361610 ACTTGGGCTTCATGCGGG 60.362 61.111 0.00 0.00 44.05 6.13
3500 5895 2.045045 CTTGGGCTTCATGCGGGA 60.045 61.111 0.00 0.00 44.05 5.14
3501 5896 2.045045 TTGGGCTTCATGCGGGAG 60.045 61.111 0.00 0.00 44.05 4.30
3502 5897 2.541547 CTTGGGCTTCATGCGGGAGA 62.542 60.000 0.00 0.00 44.05 3.71
3503 5898 2.203126 GGGCTTCATGCGGGAGAG 60.203 66.667 0.00 0.00 44.05 3.20
3504 5899 2.735772 GGGCTTCATGCGGGAGAGA 61.736 63.158 0.00 0.00 44.05 3.10
3505 5900 1.221840 GGCTTCATGCGGGAGAGAA 59.778 57.895 0.00 0.00 44.05 2.87
3506 5901 0.813210 GGCTTCATGCGGGAGAGAAG 60.813 60.000 9.21 9.21 44.05 2.85
3507 5902 0.176680 GCTTCATGCGGGAGAGAAGA 59.823 55.000 15.33 0.00 39.78 2.87
3508 5903 1.406069 GCTTCATGCGGGAGAGAAGAA 60.406 52.381 15.33 0.00 39.78 2.52
3509 5904 2.548875 CTTCATGCGGGAGAGAAGAAG 58.451 52.381 8.22 0.00 39.78 2.85
3510 5905 0.826715 TCATGCGGGAGAGAAGAAGG 59.173 55.000 0.00 0.00 0.00 3.46
3511 5906 0.826715 CATGCGGGAGAGAAGAAGGA 59.173 55.000 0.00 0.00 0.00 3.36
3512 5907 1.118838 ATGCGGGAGAGAAGAAGGAG 58.881 55.000 0.00 0.00 0.00 3.69
3513 5908 0.039764 TGCGGGAGAGAAGAAGGAGA 59.960 55.000 0.00 0.00 0.00 3.71
3514 5909 1.342474 TGCGGGAGAGAAGAAGGAGAT 60.342 52.381 0.00 0.00 0.00 2.75
3515 5910 1.068434 GCGGGAGAGAAGAAGGAGATG 59.932 57.143 0.00 0.00 0.00 2.90
3516 5911 2.660572 CGGGAGAGAAGAAGGAGATGA 58.339 52.381 0.00 0.00 0.00 2.92
3517 5912 3.230134 CGGGAGAGAAGAAGGAGATGAT 58.770 50.000 0.00 0.00 0.00 2.45
3518 5913 3.255642 CGGGAGAGAAGAAGGAGATGATC 59.744 52.174 0.00 0.00 0.00 2.92
3526 5921 2.722487 GGAGATGATCCGTCGCGT 59.278 61.111 5.77 0.00 38.67 6.01
3527 5922 1.370657 GGAGATGATCCGTCGCGTC 60.371 63.158 5.77 0.00 38.67 5.19
3528 5923 1.722852 GAGATGATCCGTCGCGTCG 60.723 63.158 18.65 18.65 0.00 5.12
3529 5924 2.024305 GATGATCCGTCGCGTCGT 59.976 61.111 23.01 6.79 0.00 4.34
3530 5925 2.277949 ATGATCCGTCGCGTCGTG 60.278 61.111 23.01 14.81 0.00 4.35
3533 5928 4.492160 ATCCGTCGCGTCGTGCAT 62.492 61.111 23.01 10.05 46.97 3.96
3538 5933 4.829518 TCGCGTCGTGCATCGGAG 62.830 66.667 5.77 4.98 46.97 4.63
3539 5934 4.829518 CGCGTCGTGCATCGGAGA 62.830 66.667 0.00 0.00 46.97 3.71
3540 5935 2.506217 GCGTCGTGCATCGGAGAA 60.506 61.111 8.46 0.00 43.58 2.87
3541 5936 2.789203 GCGTCGTGCATCGGAGAAC 61.789 63.158 8.46 0.29 43.58 3.01
3542 5937 2.497092 CGTCGTGCATCGGAGAACG 61.497 63.158 8.46 2.60 43.58 3.95
3543 5938 2.158959 GTCGTGCATCGGAGAACGG 61.159 63.158 8.36 0.00 43.58 4.44
3544 5939 3.554692 CGTGCATCGGAGAACGGC 61.555 66.667 0.00 0.00 43.58 5.68
3545 5940 3.554692 GTGCATCGGAGAACGGCG 61.555 66.667 4.80 4.80 43.58 6.46
3546 5941 4.812476 TGCATCGGAGAACGGCGG 62.812 66.667 13.24 0.00 43.58 6.13
3569 5964 3.122850 GCAATCCGGCCATGGAAG 58.877 61.111 18.40 8.01 42.46 3.46
3570 5965 2.492773 GCAATCCGGCCATGGAAGG 61.493 63.158 18.40 17.62 42.46 3.46
3571 5966 1.829533 CAATCCGGCCATGGAAGGG 60.830 63.158 18.40 12.89 42.46 3.95
3572 5967 2.316586 AATCCGGCCATGGAAGGGT 61.317 57.895 18.40 11.22 42.11 4.34
3573 5968 2.284515 AATCCGGCCATGGAAGGGTC 62.285 60.000 18.40 0.00 42.11 4.46
3574 5969 4.506255 CCGGCCATGGAAGGGTCC 62.506 72.222 18.40 4.65 41.03 4.46
3575 5970 3.411517 CGGCCATGGAAGGGTCCT 61.412 66.667 18.40 0.00 41.03 3.85
3576 5971 2.983879 CGGCCATGGAAGGGTCCTT 61.984 63.158 18.40 1.27 41.03 3.36
3577 5972 1.388133 GGCCATGGAAGGGTCCTTT 59.612 57.895 18.40 0.00 35.48 3.11
3578 5973 0.972471 GGCCATGGAAGGGTCCTTTG 60.972 60.000 18.40 0.00 35.48 2.77
3579 5974 1.607801 GCCATGGAAGGGTCCTTTGC 61.608 60.000 18.40 0.00 42.11 3.68
3580 5975 0.972471 CCATGGAAGGGTCCTTTGCC 60.972 60.000 5.56 2.48 45.22 4.52
3581 5976 0.040204 CATGGAAGGGTCCTTTGCCT 59.960 55.000 3.52 0.00 45.22 4.75
3582 5977 1.284785 CATGGAAGGGTCCTTTGCCTA 59.715 52.381 3.52 0.00 45.22 3.93
3583 5978 1.451449 TGGAAGGGTCCTTTGCCTAA 58.549 50.000 3.52 0.00 45.22 2.69
3584 5979 1.354368 TGGAAGGGTCCTTTGCCTAAG 59.646 52.381 3.52 0.00 45.22 2.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.991906 AGTTCATCACAGAAAATCAATGAAAAT 57.008 25.926 0.00 0.00 35.56 1.82
4 5 9.452287 TCATAGTTCATCACAGAAAATCAATGA 57.548 29.630 0.00 0.00 0.00 2.57
7 8 8.733458 CCTTCATAGTTCATCACAGAAAATCAA 58.267 33.333 0.00 0.00 0.00 2.57
8 9 7.148188 GCCTTCATAGTTCATCACAGAAAATCA 60.148 37.037 0.00 0.00 0.00 2.57
9 10 7.148188 TGCCTTCATAGTTCATCACAGAAAATC 60.148 37.037 0.00 0.00 0.00 2.17
10 11 6.660521 TGCCTTCATAGTTCATCACAGAAAAT 59.339 34.615 0.00 0.00 0.00 1.82
11 12 6.003326 TGCCTTCATAGTTCATCACAGAAAA 58.997 36.000 0.00 0.00 0.00 2.29
12 13 5.559770 TGCCTTCATAGTTCATCACAGAAA 58.440 37.500 0.00 0.00 0.00 2.52
13 14 5.164620 TGCCTTCATAGTTCATCACAGAA 57.835 39.130 0.00 0.00 0.00 3.02
14 15 4.824479 TGCCTTCATAGTTCATCACAGA 57.176 40.909 0.00 0.00 0.00 3.41
15 16 5.885230 TTTGCCTTCATAGTTCATCACAG 57.115 39.130 0.00 0.00 0.00 3.66
16 17 6.647334 TTTTTGCCTTCATAGTTCATCACA 57.353 33.333 0.00 0.00 0.00 3.58
37 38 9.019764 CGGCGTGAATTCTTCATAAATATTTTT 57.980 29.630 5.91 0.00 42.47 1.94
38 39 8.402472 TCGGCGTGAATTCTTCATAAATATTTT 58.598 29.630 6.85 0.00 42.47 1.82
39 40 7.925993 TCGGCGTGAATTCTTCATAAATATTT 58.074 30.769 6.85 5.89 42.47 1.40
40 41 7.490962 TCGGCGTGAATTCTTCATAAATATT 57.509 32.000 6.85 0.00 42.47 1.28
41 42 7.352739 GTTCGGCGTGAATTCTTCATAAATAT 58.647 34.615 6.85 0.00 42.47 1.28
42 43 6.238266 GGTTCGGCGTGAATTCTTCATAAATA 60.238 38.462 6.85 0.00 42.47 1.40
43 44 5.448632 GGTTCGGCGTGAATTCTTCATAAAT 60.449 40.000 6.85 0.00 42.47 1.40
44 45 4.142773 GGTTCGGCGTGAATTCTTCATAAA 60.143 41.667 6.85 0.00 42.47 1.40
45 46 3.372822 GGTTCGGCGTGAATTCTTCATAA 59.627 43.478 6.85 0.00 42.47 1.90
46 47 2.933906 GGTTCGGCGTGAATTCTTCATA 59.066 45.455 6.85 0.00 42.47 2.15
47 48 1.737793 GGTTCGGCGTGAATTCTTCAT 59.262 47.619 6.85 0.00 42.47 2.57
48 49 1.153353 GGTTCGGCGTGAATTCTTCA 58.847 50.000 6.85 0.00 39.21 3.02
49 50 1.393883 GAGGTTCGGCGTGAATTCTTC 59.606 52.381 6.85 0.00 39.21 2.87
50 51 1.439679 GAGGTTCGGCGTGAATTCTT 58.560 50.000 6.85 0.00 39.21 2.52
51 52 0.736325 CGAGGTTCGGCGTGAATTCT 60.736 55.000 6.85 0.00 39.21 2.40
52 53 1.708027 CGAGGTTCGGCGTGAATTC 59.292 57.895 6.85 0.00 39.21 2.17
53 54 2.388232 GCGAGGTTCGGCGTGAATT 61.388 57.895 6.85 0.00 40.84 2.17
54 55 2.813908 GCGAGGTTCGGCGTGAAT 60.814 61.111 6.85 0.00 40.84 2.57
61 62 0.944386 CCATATTTGGCGAGGTTCGG 59.056 55.000 0.34 0.00 40.84 4.30
62 63 1.597663 GTCCATATTTGGCGAGGTTCG 59.402 52.381 0.00 0.00 43.29 3.95
63 64 1.947456 GGTCCATATTTGGCGAGGTTC 59.053 52.381 0.00 0.00 43.29 3.62
64 65 1.745827 CGGTCCATATTTGGCGAGGTT 60.746 52.381 0.00 0.00 43.29 3.50
65 66 0.179056 CGGTCCATATTTGGCGAGGT 60.179 55.000 0.00 0.00 43.29 3.85
66 67 0.105964 TCGGTCCATATTTGGCGAGG 59.894 55.000 0.00 0.00 43.29 4.63
67 68 2.169832 ATCGGTCCATATTTGGCGAG 57.830 50.000 9.83 0.00 43.29 5.03
68 69 2.158885 TGAATCGGTCCATATTTGGCGA 60.159 45.455 7.21 7.21 43.29 5.54
69 70 2.032030 GTGAATCGGTCCATATTTGGCG 60.032 50.000 0.00 0.00 43.29 5.69
70 71 2.032030 CGTGAATCGGTCCATATTTGGC 60.032 50.000 0.00 0.00 38.19 4.52
71 72 2.032030 GCGTGAATCGGTCCATATTTGG 60.032 50.000 0.00 0.00 41.24 3.28
72 73 2.032030 GGCGTGAATCGGTCCATATTTG 60.032 50.000 0.00 0.00 40.26 2.32
73 74 2.218603 GGCGTGAATCGGTCCATATTT 58.781 47.619 0.00 0.00 40.26 1.40
74 75 1.872237 CGGCGTGAATCGGTCCATATT 60.872 52.381 0.00 0.00 40.26 1.28
75 76 0.319555 CGGCGTGAATCGGTCCATAT 60.320 55.000 0.00 0.00 40.26 1.78
76 77 1.066752 CGGCGTGAATCGGTCCATA 59.933 57.895 0.00 0.00 40.26 2.74
77 78 2.028125 ATCGGCGTGAATCGGTCCAT 62.028 55.000 6.85 0.00 40.26 3.41
78 79 1.385756 TATCGGCGTGAATCGGTCCA 61.386 55.000 6.85 0.00 40.26 4.02
79 80 0.038526 ATATCGGCGTGAATCGGTCC 60.039 55.000 6.85 0.00 40.26 4.46
80 81 1.337821 GATATCGGCGTGAATCGGTC 58.662 55.000 6.85 0.00 40.26 4.79
81 82 0.386858 CGATATCGGCGTGAATCGGT 60.387 55.000 23.24 0.41 40.26 4.69
82 83 2.349843 CGATATCGGCGTGAATCGG 58.650 57.895 23.24 11.71 40.26 4.18
93 94 3.001838 TCGTCAAAAATTGCCCGATATCG 59.998 43.478 18.31 18.31 39.44 2.92
94 95 4.545823 TCGTCAAAAATTGCCCGATATC 57.454 40.909 0.00 0.00 31.88 1.63
95 96 4.974368 TTCGTCAAAAATTGCCCGATAT 57.026 36.364 5.83 0.00 35.06 1.63
96 97 4.216687 ACTTTCGTCAAAAATTGCCCGATA 59.783 37.500 5.83 2.33 35.06 2.92
97 98 3.005367 ACTTTCGTCAAAAATTGCCCGAT 59.995 39.130 5.83 0.00 35.06 4.18
98 99 2.359531 ACTTTCGTCAAAAATTGCCCGA 59.640 40.909 0.00 2.16 33.89 5.14
99 100 2.470999 CACTTTCGTCAAAAATTGCCCG 59.529 45.455 0.00 0.00 0.00 6.13
100 101 2.799978 CCACTTTCGTCAAAAATTGCCC 59.200 45.455 0.00 0.00 0.00 5.36
101 102 2.799978 CCCACTTTCGTCAAAAATTGCC 59.200 45.455 0.00 0.00 0.00 4.52
102 103 2.220824 GCCCACTTTCGTCAAAAATTGC 59.779 45.455 0.00 0.00 0.00 3.56
103 104 2.799978 GGCCCACTTTCGTCAAAAATTG 59.200 45.455 0.00 0.00 0.00 2.32
104 105 2.544903 CGGCCCACTTTCGTCAAAAATT 60.545 45.455 0.00 0.00 0.00 1.82
105 106 1.000717 CGGCCCACTTTCGTCAAAAAT 60.001 47.619 0.00 0.00 0.00 1.82
106 107 0.382515 CGGCCCACTTTCGTCAAAAA 59.617 50.000 0.00 0.00 0.00 1.94
107 108 0.464013 TCGGCCCACTTTCGTCAAAA 60.464 50.000 0.00 0.00 0.00 2.44
108 109 0.464013 TTCGGCCCACTTTCGTCAAA 60.464 50.000 0.00 0.00 0.00 2.69
109 110 0.250553 ATTCGGCCCACTTTCGTCAA 60.251 50.000 0.00 0.00 0.00 3.18
110 111 0.609151 TATTCGGCCCACTTTCGTCA 59.391 50.000 0.00 0.00 0.00 4.35
111 112 1.729284 TTATTCGGCCCACTTTCGTC 58.271 50.000 0.00 0.00 0.00 4.20
112 113 2.014128 CATTATTCGGCCCACTTTCGT 58.986 47.619 0.00 0.00 0.00 3.85
113 114 1.333619 CCATTATTCGGCCCACTTTCG 59.666 52.381 0.00 0.00 0.00 3.46
114 115 2.357952 GTCCATTATTCGGCCCACTTTC 59.642 50.000 0.00 0.00 0.00 2.62
115 116 2.375146 GTCCATTATTCGGCCCACTTT 58.625 47.619 0.00 0.00 0.00 2.66
116 117 1.409661 GGTCCATTATTCGGCCCACTT 60.410 52.381 0.00 0.00 0.00 3.16
117 118 0.182775 GGTCCATTATTCGGCCCACT 59.817 55.000 0.00 0.00 0.00 4.00
118 119 1.164041 CGGTCCATTATTCGGCCCAC 61.164 60.000 0.00 0.00 0.00 4.61
119 120 1.147376 CGGTCCATTATTCGGCCCA 59.853 57.895 0.00 0.00 0.00 5.36
120 121 0.883370 GTCGGTCCATTATTCGGCCC 60.883 60.000 0.00 0.00 0.00 5.80
121 122 0.179067 TGTCGGTCCATTATTCGGCC 60.179 55.000 0.00 0.00 0.00 6.13
122 123 1.798813 GATGTCGGTCCATTATTCGGC 59.201 52.381 0.00 0.00 0.00 5.54
123 124 2.058798 CGATGTCGGTCCATTATTCGG 58.941 52.381 0.00 0.00 35.37 4.30
124 125 3.007979 TCGATGTCGGTCCATTATTCG 57.992 47.619 2.25 0.00 40.29 3.34
125 126 3.123621 GCATCGATGTCGGTCCATTATTC 59.876 47.826 25.47 0.96 40.29 1.75
126 127 3.067106 GCATCGATGTCGGTCCATTATT 58.933 45.455 25.47 0.00 40.29 1.40
127 128 2.612972 GGCATCGATGTCGGTCCATTAT 60.613 50.000 25.47 0.00 40.29 1.28
128 129 1.270094 GGCATCGATGTCGGTCCATTA 60.270 52.381 25.47 0.00 40.29 1.90
129 130 0.532862 GGCATCGATGTCGGTCCATT 60.533 55.000 25.47 0.00 40.29 3.16
130 131 1.069765 GGCATCGATGTCGGTCCAT 59.930 57.895 25.47 0.00 40.29 3.41
131 132 0.753848 TAGGCATCGATGTCGGTCCA 60.754 55.000 25.47 7.16 37.51 4.02
132 133 0.387929 TTAGGCATCGATGTCGGTCC 59.612 55.000 25.47 17.38 37.51 4.46
133 134 2.218953 TTTAGGCATCGATGTCGGTC 57.781 50.000 25.47 9.15 37.51 4.79
134 135 2.550978 CTTTTAGGCATCGATGTCGGT 58.449 47.619 25.47 11.82 37.51 4.69
135 136 1.261619 GCTTTTAGGCATCGATGTCGG 59.738 52.381 25.47 14.32 37.51 4.79
136 137 1.071239 CGCTTTTAGGCATCGATGTCG 60.071 52.381 25.47 11.86 37.51 4.35
137 138 2.033662 GTCGCTTTTAGGCATCGATGTC 60.034 50.000 22.34 22.34 0.00 3.06
138 139 1.933853 GTCGCTTTTAGGCATCGATGT 59.066 47.619 25.47 10.33 0.00 3.06
139 140 1.261619 GGTCGCTTTTAGGCATCGATG 59.738 52.381 21.27 21.27 0.00 3.84
140 141 1.583054 GGTCGCTTTTAGGCATCGAT 58.417 50.000 0.00 0.00 0.00 3.59
141 142 0.461339 GGGTCGCTTTTAGGCATCGA 60.461 55.000 0.00 0.00 0.00 3.59
142 143 0.742990 TGGGTCGCTTTTAGGCATCG 60.743 55.000 0.00 0.00 0.00 3.84
143 144 1.017387 CTGGGTCGCTTTTAGGCATC 58.983 55.000 0.00 0.00 0.00 3.91
144 145 0.394352 CCTGGGTCGCTTTTAGGCAT 60.394 55.000 0.00 0.00 0.00 4.40
145 146 1.002624 CCTGGGTCGCTTTTAGGCA 60.003 57.895 0.00 0.00 0.00 4.75
146 147 1.749258 CCCTGGGTCGCTTTTAGGC 60.749 63.158 3.97 0.00 0.00 3.93
147 148 0.392595 GACCCTGGGTCGCTTTTAGG 60.393 60.000 28.96 0.00 43.14 2.69
148 149 3.154589 GACCCTGGGTCGCTTTTAG 57.845 57.895 28.96 0.00 43.14 1.85
157 158 2.989824 CAGTCGTCGACCCTGGGT 60.990 66.667 20.72 20.72 39.44 4.51
158 159 3.760035 CCAGTCGTCGACCCTGGG 61.760 72.222 28.88 12.28 41.69 4.45
159 160 3.760035 CCCAGTCGTCGACCCTGG 61.760 72.222 29.29 29.29 44.39 4.45
160 161 2.989824 ACCCAGTCGTCGACCCTG 60.990 66.667 21.40 18.39 32.18 4.45
161 162 2.989824 CACCCAGTCGTCGACCCT 60.990 66.667 21.40 3.04 32.18 4.34
162 163 4.736896 GCACCCAGTCGTCGACCC 62.737 72.222 21.40 0.34 32.18 4.46
163 164 4.736896 GGCACCCAGTCGTCGACC 62.737 72.222 21.40 5.20 32.18 4.79
186 187 2.043953 AAAATCGGCTCTGGGGGC 60.044 61.111 0.00 0.00 0.00 5.80
187 188 2.418083 GCAAAATCGGCTCTGGGGG 61.418 63.158 0.00 0.00 0.00 5.40
188 189 2.418083 GGCAAAATCGGCTCTGGGG 61.418 63.158 0.00 0.00 0.00 4.96
189 190 2.764314 CGGCAAAATCGGCTCTGGG 61.764 63.158 0.00 0.00 0.00 4.45
190 191 2.793946 CGGCAAAATCGGCTCTGG 59.206 61.111 0.00 0.00 0.00 3.86
191 192 2.100991 GCGGCAAAATCGGCTCTG 59.899 61.111 0.00 0.00 0.00 3.35
192 193 2.045926 AGCGGCAAAATCGGCTCT 60.046 55.556 1.45 0.00 38.04 4.09
193 194 2.100991 CAGCGGCAAAATCGGCTC 59.899 61.111 1.45 0.00 40.06 4.70
194 195 3.443045 CCAGCGGCAAAATCGGCT 61.443 61.111 1.45 0.00 42.29 5.52
216 217 1.091537 TAAAAATCGCCGCCTGAAGG 58.908 50.000 0.00 0.00 38.53 3.46
217 218 2.719798 CATAAAAATCGCCGCCTGAAG 58.280 47.619 0.00 0.00 0.00 3.02
218 219 1.202245 GCATAAAAATCGCCGCCTGAA 60.202 47.619 0.00 0.00 0.00 3.02
219 220 0.380378 GCATAAAAATCGCCGCCTGA 59.620 50.000 0.00 0.00 0.00 3.86
220 221 0.594796 GGCATAAAAATCGCCGCCTG 60.595 55.000 0.00 0.00 35.79 4.85
221 222 1.733526 GGCATAAAAATCGCCGCCT 59.266 52.632 0.00 0.00 35.79 5.52
222 223 4.319249 GGCATAAAAATCGCCGCC 57.681 55.556 0.00 0.00 35.79 6.13
225 226 1.338020 CCAGGAGGCATAAAAATCGCC 59.662 52.381 0.00 0.00 46.62 5.54
226 227 1.338020 CCCAGGAGGCATAAAAATCGC 59.662 52.381 0.00 0.00 0.00 4.58
227 228 1.956477 CCCCAGGAGGCATAAAAATCG 59.044 52.381 0.00 0.00 0.00 3.34
228 229 2.319844 CCCCCAGGAGGCATAAAAATC 58.680 52.381 0.00 0.00 33.47 2.17
229 230 2.477104 CCCCCAGGAGGCATAAAAAT 57.523 50.000 0.00 0.00 33.47 1.82
239 240 4.410400 GTCGTTGGCCCCCAGGAG 62.410 72.222 0.00 0.00 33.81 3.69
240 241 4.974438 AGTCGTTGGCCCCCAGGA 62.974 66.667 0.00 0.00 33.81 3.86
241 242 4.722700 CAGTCGTTGGCCCCCAGG 62.723 72.222 0.00 0.00 33.81 4.45
242 243 4.722700 CCAGTCGTTGGCCCCCAG 62.723 72.222 0.00 0.00 40.87 4.45
255 256 8.847363 GCAACTAGCATAAGAGCATCTCCAGT 62.847 46.154 0.00 0.00 45.39 4.00
256 257 6.532619 GCAACTAGCATAAGAGCATCTCCAG 61.533 48.000 0.00 0.00 45.39 3.86
257 258 4.741837 GCAACTAGCATAAGAGCATCTCCA 60.742 45.833 0.00 0.00 45.39 3.86
258 259 3.745458 GCAACTAGCATAAGAGCATCTCC 59.255 47.826 0.00 0.00 45.39 3.71
259 260 4.988708 GCAACTAGCATAAGAGCATCTC 57.011 45.455 0.00 0.00 45.39 2.75
272 273 0.389391 TCTCGCATAGGGCAACTAGC 59.611 55.000 0.00 0.00 45.17 3.42
273 274 2.890808 TTCTCGCATAGGGCAACTAG 57.109 50.000 0.00 0.00 45.17 2.57
274 275 2.698274 TCATTCTCGCATAGGGCAACTA 59.302 45.455 0.00 0.00 45.17 2.24
310 311 1.808411 TCCTGCCGTGAAGAATTGTC 58.192 50.000 0.00 0.00 0.00 3.18
325 326 3.549019 CGAAGATGTAGGTCGTGATCCTG 60.549 52.174 0.00 0.00 36.60 3.86
349 350 6.634039 GCTGTAAGAGATATTTGGGTTGGGTA 60.634 42.308 0.00 0.00 34.07 3.69
350 351 5.755849 CTGTAAGAGATATTTGGGTTGGGT 58.244 41.667 0.00 0.00 34.07 4.51
351 352 4.580580 GCTGTAAGAGATATTTGGGTTGGG 59.419 45.833 0.00 0.00 34.07 4.12
352 353 5.440610 AGCTGTAAGAGATATTTGGGTTGG 58.559 41.667 0.00 0.00 34.07 3.77
373 374 9.699703 TTTTATTGCCGGGAATTTATTTATAGC 57.300 29.630 27.04 0.00 0.00 2.97
424 425 6.194463 CGACGCTCATTCATTGAATAATTGT 58.806 36.000 11.44 8.45 32.78 2.71
433 434 2.463553 AATGCGACGCTCATTCATTG 57.536 45.000 22.08 0.00 28.76 2.82
489 493 1.954382 TGCTACGTTATCCTCGCAGAT 59.046 47.619 0.00 0.00 33.89 2.90
494 498 2.190981 GTTGGTGCTACGTTATCCTCG 58.809 52.381 0.00 0.00 0.00 4.63
542 578 4.748600 GGATTAGTATTGGACTGGTTACGC 59.251 45.833 0.00 0.00 39.39 4.42
557 594 1.065998 GTTGTGCCGTGGGGATTAGTA 60.066 52.381 0.00 0.00 34.06 1.82
705 753 1.336056 GGGAGTAGTCCGATCGATTGC 60.336 57.143 18.66 5.11 45.05 3.56
859 924 2.496817 GCACGCGGAGAGAAGGAT 59.503 61.111 12.47 0.00 0.00 3.24
860 925 3.760035 GGCACGCGGAGAGAAGGA 61.760 66.667 12.47 0.00 0.00 3.36
861 926 4.821589 GGGCACGCGGAGAGAAGG 62.822 72.222 12.47 0.00 0.00 3.46
862 927 3.997064 CTGGGCACGCGGAGAGAAG 62.997 68.421 12.47 0.00 0.00 2.85
922 1015 3.352648 AGGAGAAGGAAGAGACGAAGAG 58.647 50.000 0.00 0.00 0.00 2.85
937 1030 1.343478 GGACTGGGAGATGGAGGAGAA 60.343 57.143 0.00 0.00 0.00 2.87
954 1052 2.955660 TGGAACAGAAACAATGGTGGAC 59.044 45.455 0.00 0.00 0.00 4.02
955 1053 2.955660 GTGGAACAGAAACAATGGTGGA 59.044 45.455 0.00 0.00 41.80 4.02
1042 1148 0.893270 CCGTCAGCCATGTTTTGGGA 60.893 55.000 0.00 0.00 46.55 4.37
1056 1162 3.371063 GACAGGTCTCCGCCGTCA 61.371 66.667 0.00 0.00 34.56 4.35
1319 1461 2.284921 TCCACTCAGCTCCCAGGG 60.285 66.667 0.00 0.00 0.00 4.45
1428 1573 4.771356 TCGCTTCGGCCGTCTTCG 62.771 66.667 27.15 22.47 37.76 3.79
1438 1583 0.103026 TCATCCACCATCTCGCTTCG 59.897 55.000 0.00 0.00 0.00 3.79
1477 1625 3.090532 GCCCTTCTCCCCCGTCAT 61.091 66.667 0.00 0.00 0.00 3.06
2256 2855 2.839486 TTGCCACTCTCTCGTTGAAT 57.161 45.000 0.00 0.00 0.00 2.57
2307 2907 2.402388 CATCGCGCCTTGAGCTTG 59.598 61.111 0.00 0.00 40.39 4.01
2309 2909 4.845580 CCCATCGCGCCTTGAGCT 62.846 66.667 0.00 0.00 40.39 4.09
2322 2922 3.095163 CTCTGGAGGCAGGCCCAT 61.095 66.667 6.70 0.00 36.58 4.00
2546 3189 2.292794 CTTGCCATGGTGGAGCATGC 62.293 60.000 14.67 10.51 40.96 4.06
2599 3245 9.444600 GGTCAAGAAATGAAACAGGTAATACTA 57.555 33.333 0.00 0.00 40.50 1.82
2600 3246 7.393515 GGGTCAAGAAATGAAACAGGTAATACT 59.606 37.037 0.00 0.00 40.50 2.12
2601 3247 7.535997 GGGTCAAGAAATGAAACAGGTAATAC 58.464 38.462 0.00 0.00 40.50 1.89
2602 3248 6.373216 CGGGTCAAGAAATGAAACAGGTAATA 59.627 38.462 0.00 0.00 40.50 0.98
2603 3249 5.183140 CGGGTCAAGAAATGAAACAGGTAAT 59.817 40.000 0.00 0.00 40.50 1.89
2645 3303 9.452287 TCCCTTAATTATTGCTTTTACGTACTT 57.548 29.630 0.00 0.00 0.00 2.24
2709 3379 2.618709 AGAAAACTTGTTGGCTCTTCCG 59.381 45.455 0.00 0.00 37.80 4.30
2765 3555 1.778027 CGAAGAAAACGTTGCCCGGT 61.778 55.000 0.00 0.00 42.24 5.28
2783 3573 6.018016 TCCTCCGAACCTAAAAAGTAAAAACG 60.018 38.462 0.00 0.00 0.00 3.60
2784 3574 7.134815 GTCCTCCGAACCTAAAAAGTAAAAAC 58.865 38.462 0.00 0.00 0.00 2.43
2789 3579 4.344679 TGTGTCCTCCGAACCTAAAAAGTA 59.655 41.667 0.00 0.00 0.00 2.24
2790 3580 3.135167 TGTGTCCTCCGAACCTAAAAAGT 59.865 43.478 0.00 0.00 0.00 2.66
2791 3581 3.735591 TGTGTCCTCCGAACCTAAAAAG 58.264 45.455 0.00 0.00 0.00 2.27
2792 3582 3.842007 TGTGTCCTCCGAACCTAAAAA 57.158 42.857 0.00 0.00 0.00 1.94
2793 3583 3.118334 TGTTGTGTCCTCCGAACCTAAAA 60.118 43.478 0.00 0.00 0.00 1.52
2794 3584 2.435069 TGTTGTGTCCTCCGAACCTAAA 59.565 45.455 0.00 0.00 0.00 1.85
2795 3585 2.040939 TGTTGTGTCCTCCGAACCTAA 58.959 47.619 0.00 0.00 0.00 2.69
2796 3586 1.707106 TGTTGTGTCCTCCGAACCTA 58.293 50.000 0.00 0.00 0.00 3.08
2814 3604 7.829725 TCTTTCCAATATCTCAAACCACAATG 58.170 34.615 0.00 0.00 0.00 2.82
2902 3724 7.219922 GCAAAATGAAACAATGATACAACGTC 58.780 34.615 0.00 0.00 0.00 4.34
2913 3735 5.702209 GTCTTGGATGGCAAAATGAAACAAT 59.298 36.000 0.00 0.00 0.00 2.71
2916 3738 3.996363 GGTCTTGGATGGCAAAATGAAAC 59.004 43.478 0.00 0.00 0.00 2.78
2940 3762 7.453126 GGAGAGTGGGAGAGATCAATCTAATTA 59.547 40.741 0.00 0.00 38.25 1.40
2941 3763 6.269769 GGAGAGTGGGAGAGATCAATCTAATT 59.730 42.308 0.00 0.00 38.25 1.40
2942 3764 5.779771 GGAGAGTGGGAGAGATCAATCTAAT 59.220 44.000 0.00 0.00 38.25 1.73
2943 3765 5.144100 GGAGAGTGGGAGAGATCAATCTAA 58.856 45.833 0.00 0.00 38.25 2.10
2994 5354 6.755141 GCATAATCAGAGTTTCGTACTAACCA 59.245 38.462 4.64 0.00 37.17 3.67
3188 5583 5.644206 TGAAGTACTCCGATAGCATAGCTAG 59.356 44.000 0.00 0.00 44.66 3.42
3203 5598 2.166664 ACGCCTCATCCTTGAAGTACTC 59.833 50.000 0.00 0.00 0.00 2.59
3204 5599 2.180276 ACGCCTCATCCTTGAAGTACT 58.820 47.619 0.00 0.00 0.00 2.73
3205 5600 2.674796 ACGCCTCATCCTTGAAGTAC 57.325 50.000 0.00 0.00 0.00 2.73
3206 5601 3.069586 CCATACGCCTCATCCTTGAAGTA 59.930 47.826 0.00 0.00 0.00 2.24
3207 5602 2.158900 CCATACGCCTCATCCTTGAAGT 60.159 50.000 0.00 0.00 0.00 3.01
3208 5603 2.487934 CCATACGCCTCATCCTTGAAG 58.512 52.381 0.00 0.00 0.00 3.02
3209 5604 1.475034 GCCATACGCCTCATCCTTGAA 60.475 52.381 0.00 0.00 0.00 2.69
3210 5605 0.106708 GCCATACGCCTCATCCTTGA 59.893 55.000 0.00 0.00 0.00 3.02
3211 5606 1.224069 CGCCATACGCCTCATCCTTG 61.224 60.000 0.00 0.00 33.16 3.61
3212 5607 1.069765 CGCCATACGCCTCATCCTT 59.930 57.895 0.00 0.00 33.16 3.36
3213 5608 2.737180 CGCCATACGCCTCATCCT 59.263 61.111 0.00 0.00 33.16 3.24
3214 5609 2.357517 CCGCCATACGCCTCATCC 60.358 66.667 0.00 0.00 41.76 3.51
3215 5610 2.357517 CCCGCCATACGCCTCATC 60.358 66.667 0.00 0.00 41.76 2.92
3216 5611 3.941188 CCCCGCCATACGCCTCAT 61.941 66.667 0.00 0.00 41.76 2.90
3223 5618 3.469863 TTGATCGCCCCCGCCATAC 62.470 63.158 0.00 0.00 0.00 2.39
3224 5619 3.164977 TTGATCGCCCCCGCCATA 61.165 61.111 0.00 0.00 0.00 2.74
3225 5620 4.569180 CTTGATCGCCCCCGCCAT 62.569 66.667 0.00 0.00 0.00 4.40
3265 5660 1.968017 CGATCCCCGGCCAATGATG 60.968 63.158 2.24 0.00 33.91 3.07
3266 5661 2.431683 CGATCCCCGGCCAATGAT 59.568 61.111 2.24 0.00 33.91 2.45
3267 5662 4.562425 GCGATCCCCGGCCAATGA 62.562 66.667 2.24 0.00 39.04 2.57
3299 5694 3.373565 GCCAGAGCCCAAAACCGG 61.374 66.667 0.00 0.00 0.00 5.28
3300 5695 2.597217 TGCCAGAGCCCAAAACCG 60.597 61.111 0.00 0.00 38.69 4.44
3301 5696 1.228552 TCTGCCAGAGCCCAAAACC 60.229 57.895 0.00 0.00 38.69 3.27
3302 5697 0.538287 ACTCTGCCAGAGCCCAAAAC 60.538 55.000 21.49 0.00 46.12 2.43
3303 5698 0.250901 GACTCTGCCAGAGCCCAAAA 60.251 55.000 21.49 0.00 46.12 2.44
3304 5699 1.376466 GACTCTGCCAGAGCCCAAA 59.624 57.895 21.49 0.00 46.12 3.28
3305 5700 2.596851 GGACTCTGCCAGAGCCCAA 61.597 63.158 20.84 0.00 43.47 4.12
3306 5701 3.005539 GGACTCTGCCAGAGCCCA 61.006 66.667 20.84 0.00 43.47 5.36
3307 5702 4.154347 CGGACTCTGCCAGAGCCC 62.154 72.222 21.49 18.91 46.12 5.19
3308 5703 2.430610 ATCGGACTCTGCCAGAGCC 61.431 63.158 21.49 20.19 46.12 4.70
3309 5704 1.227205 CATCGGACTCTGCCAGAGC 60.227 63.158 21.49 13.61 46.12 4.09
3311 5706 1.039785 CCTCATCGGACTCTGCCAGA 61.040 60.000 0.00 0.00 33.16 3.86
3312 5707 1.039785 TCCTCATCGGACTCTGCCAG 61.040 60.000 0.00 0.00 36.69 4.85
3313 5708 1.000359 TCCTCATCGGACTCTGCCA 60.000 57.895 0.00 0.00 36.69 4.92
3314 5709 3.941081 TCCTCATCGGACTCTGCC 58.059 61.111 0.00 0.00 36.69 4.85
3321 5716 2.404186 CCACGTCGTCCTCATCGGA 61.404 63.158 0.00 0.00 40.30 4.55
3322 5717 2.102357 CCACGTCGTCCTCATCGG 59.898 66.667 0.00 0.00 0.00 4.18
3323 5718 1.226323 GTCCACGTCGTCCTCATCG 60.226 63.158 0.00 0.00 0.00 3.84
3324 5719 1.226323 CGTCCACGTCGTCCTCATC 60.226 63.158 0.00 0.00 34.11 2.92
3325 5720 1.645704 CTCGTCCACGTCGTCCTCAT 61.646 60.000 0.00 0.00 40.80 2.90
3326 5721 2.281002 TCGTCCACGTCGTCCTCA 60.281 61.111 0.00 0.00 40.80 3.86
3327 5722 2.479650 CTCGTCCACGTCGTCCTC 59.520 66.667 0.00 0.00 40.80 3.71
3328 5723 2.816601 ATCCTCGTCCACGTCGTCCT 62.817 60.000 0.00 0.00 40.80 3.85
3329 5724 2.404995 ATCCTCGTCCACGTCGTCC 61.405 63.158 0.00 0.00 40.80 4.79
3330 5725 1.226323 CATCCTCGTCCACGTCGTC 60.226 63.158 0.00 0.00 40.80 4.20
3331 5726 2.697761 CCATCCTCGTCCACGTCGT 61.698 63.158 0.00 0.00 40.80 4.34
3332 5727 2.102357 CCATCCTCGTCCACGTCG 59.898 66.667 0.00 0.00 40.80 5.12
3333 5728 2.494918 CCCATCCTCGTCCACGTC 59.505 66.667 0.00 0.00 40.80 4.34
3334 5729 3.075005 CCCCATCCTCGTCCACGT 61.075 66.667 0.00 0.00 40.80 4.49
3335 5730 2.758327 TCCCCATCCTCGTCCACG 60.758 66.667 0.00 0.00 41.45 4.94
3336 5731 1.677637 GAGTCCCCATCCTCGTCCAC 61.678 65.000 0.00 0.00 0.00 4.02
3337 5732 1.381327 GAGTCCCCATCCTCGTCCA 60.381 63.158 0.00 0.00 0.00 4.02
3338 5733 2.491022 CGAGTCCCCATCCTCGTCC 61.491 68.421 0.00 0.00 44.14 4.79
3339 5734 3.121019 CGAGTCCCCATCCTCGTC 58.879 66.667 0.00 0.00 44.14 4.20
3342 5737 3.917760 CGGCGAGTCCCCATCCTC 61.918 72.222 0.00 0.00 0.00 3.71
3361 5756 3.878519 GAGACGCCGGAGAGGTCG 61.879 72.222 13.83 3.32 43.70 4.79
3362 5757 2.438795 AGAGACGCCGGAGAGGTC 60.439 66.667 13.83 9.69 43.70 3.85
3363 5758 2.752238 CAGAGACGCCGGAGAGGT 60.752 66.667 13.83 0.00 43.70 3.85
3364 5759 2.438614 TCAGAGACGCCGGAGAGG 60.439 66.667 13.83 0.00 44.97 3.69
3365 5760 2.766400 GGTCAGAGACGCCGGAGAG 61.766 68.421 13.83 0.52 32.65 3.20
3366 5761 2.750637 GGTCAGAGACGCCGGAGA 60.751 66.667 13.83 0.00 32.65 3.71
3367 5762 3.827898 GGGTCAGAGACGCCGGAG 61.828 72.222 5.05 3.72 39.17 4.63
3372 5767 2.579738 GGAAGGGGTCAGAGACGC 59.420 66.667 5.74 5.74 43.35 5.19
3373 5768 1.038130 ATCGGAAGGGGTCAGAGACG 61.038 60.000 0.00 0.00 33.68 4.18
3374 5769 0.747852 GATCGGAAGGGGTCAGAGAC 59.252 60.000 0.00 0.00 33.68 3.36
3375 5770 0.631753 AGATCGGAAGGGGTCAGAGA 59.368 55.000 0.00 0.00 33.68 3.10
3376 5771 1.036707 GAGATCGGAAGGGGTCAGAG 58.963 60.000 0.00 0.00 33.68 3.35
3377 5772 0.335019 TGAGATCGGAAGGGGTCAGA 59.665 55.000 0.00 0.00 34.76 3.27
3378 5773 1.342819 GATGAGATCGGAAGGGGTCAG 59.657 57.143 0.00 0.00 0.00 3.51
3379 5774 1.062886 AGATGAGATCGGAAGGGGTCA 60.063 52.381 0.00 0.00 0.00 4.02
3380 5775 1.710816 AGATGAGATCGGAAGGGGTC 58.289 55.000 0.00 0.00 0.00 4.46
3381 5776 3.169099 CATAGATGAGATCGGAAGGGGT 58.831 50.000 0.00 0.00 0.00 4.95
3382 5777 3.435275 TCATAGATGAGATCGGAAGGGG 58.565 50.000 0.00 0.00 32.11 4.79
3394 5789 5.822519 CCGGAATTGGAAAACTCATAGATGA 59.177 40.000 0.00 0.00 35.16 2.92
3395 5790 5.009010 CCCGGAATTGGAAAACTCATAGATG 59.991 44.000 0.73 0.00 0.00 2.90
3396 5791 5.133221 CCCGGAATTGGAAAACTCATAGAT 58.867 41.667 0.73 0.00 0.00 1.98
3397 5792 4.018779 ACCCGGAATTGGAAAACTCATAGA 60.019 41.667 0.73 0.00 0.00 1.98
3398 5793 4.270008 ACCCGGAATTGGAAAACTCATAG 58.730 43.478 0.73 0.00 0.00 2.23
3399 5794 4.310022 ACCCGGAATTGGAAAACTCATA 57.690 40.909 0.73 0.00 0.00 2.15
3400 5795 3.169512 ACCCGGAATTGGAAAACTCAT 57.830 42.857 0.73 0.00 0.00 2.90
3401 5796 2.668144 ACCCGGAATTGGAAAACTCA 57.332 45.000 0.73 0.00 0.00 3.41
3402 5797 2.417586 CGTACCCGGAATTGGAAAACTC 59.582 50.000 0.73 0.00 0.00 3.01
3403 5798 2.038820 TCGTACCCGGAATTGGAAAACT 59.961 45.455 0.73 0.00 33.95 2.66
3404 5799 2.160219 GTCGTACCCGGAATTGGAAAAC 59.840 50.000 0.73 0.00 33.95 2.43
3405 5800 2.425539 GTCGTACCCGGAATTGGAAAA 58.574 47.619 0.73 0.00 33.95 2.29
3406 5801 1.672441 CGTCGTACCCGGAATTGGAAA 60.672 52.381 0.73 0.00 33.95 3.13
3407 5802 0.108709 CGTCGTACCCGGAATTGGAA 60.109 55.000 0.73 0.00 33.95 3.53
3408 5803 0.964860 TCGTCGTACCCGGAATTGGA 60.965 55.000 0.73 0.00 33.95 3.53
3409 5804 0.108709 TTCGTCGTACCCGGAATTGG 60.109 55.000 0.73 0.00 33.95 3.16
3410 5805 1.135315 TCTTCGTCGTACCCGGAATTG 60.135 52.381 0.73 0.00 33.95 2.32
3411 5806 1.176527 TCTTCGTCGTACCCGGAATT 58.823 50.000 0.73 0.00 33.95 2.17
3412 5807 1.066605 CATCTTCGTCGTACCCGGAAT 59.933 52.381 0.73 0.00 33.95 3.01
3413 5808 0.452987 CATCTTCGTCGTACCCGGAA 59.547 55.000 0.73 0.00 33.95 4.30
3414 5809 0.392863 TCATCTTCGTCGTACCCGGA 60.393 55.000 0.73 0.00 33.95 5.14
3415 5810 0.666913 ATCATCTTCGTCGTACCCGG 59.333 55.000 0.00 0.00 33.95 5.73
3416 5811 1.065102 ACATCATCTTCGTCGTACCCG 59.935 52.381 0.00 0.00 0.00 5.28
3417 5812 2.460918 CACATCATCTTCGTCGTACCC 58.539 52.381 0.00 0.00 0.00 3.69
3418 5813 2.460918 CCACATCATCTTCGTCGTACC 58.539 52.381 0.00 0.00 0.00 3.34
3419 5814 1.852895 GCCACATCATCTTCGTCGTAC 59.147 52.381 0.00 0.00 0.00 3.67
3420 5815 1.474879 TGCCACATCATCTTCGTCGTA 59.525 47.619 0.00 0.00 0.00 3.43
3421 5816 0.246360 TGCCACATCATCTTCGTCGT 59.754 50.000 0.00 0.00 0.00 4.34
3422 5817 1.061131 GTTGCCACATCATCTTCGTCG 59.939 52.381 0.00 0.00 0.00 5.12
3423 5818 1.061131 CGTTGCCACATCATCTTCGTC 59.939 52.381 0.00 0.00 0.00 4.20
3424 5819 1.078709 CGTTGCCACATCATCTTCGT 58.921 50.000 0.00 0.00 0.00 3.85
3425 5820 1.061131 GTCGTTGCCACATCATCTTCG 59.939 52.381 0.00 0.00 0.00 3.79
3426 5821 1.061131 CGTCGTTGCCACATCATCTTC 59.939 52.381 0.00 0.00 0.00 2.87
3427 5822 1.078709 CGTCGTTGCCACATCATCTT 58.921 50.000 0.00 0.00 0.00 2.40
3428 5823 0.740868 CCGTCGTTGCCACATCATCT 60.741 55.000 0.00 0.00 0.00 2.90
3429 5824 1.019278 ACCGTCGTTGCCACATCATC 61.019 55.000 0.00 0.00 0.00 2.92
3430 5825 1.003839 ACCGTCGTTGCCACATCAT 60.004 52.632 0.00 0.00 0.00 2.45
3431 5826 1.666553 GACCGTCGTTGCCACATCA 60.667 57.895 0.00 0.00 0.00 3.07
3432 5827 2.726691 CGACCGTCGTTGCCACATC 61.727 63.158 12.91 0.00 34.72 3.06
3433 5828 2.501223 ATCGACCGTCGTTGCCACAT 62.501 55.000 19.89 2.24 41.35 3.21
3434 5829 3.215597 ATCGACCGTCGTTGCCACA 62.216 57.895 19.89 0.00 41.35 4.17
3435 5830 2.431942 ATCGACCGTCGTTGCCAC 60.432 61.111 19.89 0.00 41.35 5.01
3436 5831 2.423290 TTCATCGACCGTCGTTGCCA 62.423 55.000 21.83 11.53 41.35 4.92
3437 5832 1.683790 CTTCATCGACCGTCGTTGCC 61.684 60.000 21.83 0.00 41.35 4.52
3438 5833 1.007336 ACTTCATCGACCGTCGTTGC 61.007 55.000 21.83 0.00 41.35 4.17
3439 5834 0.982673 GACTTCATCGACCGTCGTTG 59.017 55.000 20.98 20.98 41.35 4.10
3440 5835 0.879765 AGACTTCATCGACCGTCGTT 59.120 50.000 19.89 9.68 41.35 3.85
3441 5836 0.879765 AAGACTTCATCGACCGTCGT 59.120 50.000 19.89 5.60 41.35 4.34
3442 5837 1.260206 CAAGACTTCATCGACCGTCG 58.740 55.000 14.94 14.94 42.10 5.12
3443 5838 0.992802 GCAAGACTTCATCGACCGTC 59.007 55.000 0.00 0.00 0.00 4.79
3444 5839 0.389948 GGCAAGACTTCATCGACCGT 60.390 55.000 0.00 0.00 0.00 4.83
3445 5840 0.389817 TGGCAAGACTTCATCGACCG 60.390 55.000 0.00 0.00 0.00 4.79
3446 5841 1.079503 GTGGCAAGACTTCATCGACC 58.920 55.000 0.00 0.00 0.00 4.79
3447 5842 1.079503 GGTGGCAAGACTTCATCGAC 58.920 55.000 0.00 0.00 0.00 4.20
3448 5843 0.036388 GGGTGGCAAGACTTCATCGA 60.036 55.000 0.00 0.00 0.00 3.59
3449 5844 0.321564 TGGGTGGCAAGACTTCATCG 60.322 55.000 0.00 0.00 0.00 3.84
3450 5845 1.541588 GTTGGGTGGCAAGACTTCATC 59.458 52.381 0.00 0.00 0.00 2.92
3451 5846 1.145738 AGTTGGGTGGCAAGACTTCAT 59.854 47.619 0.00 0.00 0.00 2.57
3452 5847 0.550914 AGTTGGGTGGCAAGACTTCA 59.449 50.000 0.00 0.00 0.00 3.02
3453 5848 2.561478 TAGTTGGGTGGCAAGACTTC 57.439 50.000 0.00 0.00 0.00 3.01
3454 5849 2.290960 GGATAGTTGGGTGGCAAGACTT 60.291 50.000 0.00 0.00 0.00 3.01
3455 5850 1.282157 GGATAGTTGGGTGGCAAGACT 59.718 52.381 0.00 0.00 0.00 3.24
3456 5851 1.751437 GGATAGTTGGGTGGCAAGAC 58.249 55.000 0.00 0.00 0.00 3.01
3457 5852 0.251916 CGGATAGTTGGGTGGCAAGA 59.748 55.000 0.00 0.00 0.00 3.02
3458 5853 0.748005 CCGGATAGTTGGGTGGCAAG 60.748 60.000 0.00 0.00 0.00 4.01
3459 5854 1.301623 CCGGATAGTTGGGTGGCAA 59.698 57.895 0.00 0.00 0.00 4.52
3460 5855 2.994699 CCGGATAGTTGGGTGGCA 59.005 61.111 0.00 0.00 0.00 4.92
3461 5856 2.516225 GCCGGATAGTTGGGTGGC 60.516 66.667 5.05 0.00 35.04 5.01
3462 5857 2.192175 GGCCGGATAGTTGGGTGG 59.808 66.667 5.05 0.00 0.00 4.61
3463 5858 1.153168 CTGGCCGGATAGTTGGGTG 60.153 63.158 5.28 0.00 0.00 4.61
3464 5859 1.306654 TCTGGCCGGATAGTTGGGT 60.307 57.895 11.27 0.00 0.00 4.51
3465 5860 1.146263 GTCTGGCCGGATAGTTGGG 59.854 63.158 19.55 0.00 0.00 4.12
3466 5861 0.541863 AAGTCTGGCCGGATAGTTGG 59.458 55.000 19.55 0.00 0.00 3.77
3467 5862 1.656652 CAAGTCTGGCCGGATAGTTG 58.343 55.000 19.55 17.24 0.00 3.16
3468 5863 0.541863 CCAAGTCTGGCCGGATAGTT 59.458 55.000 19.55 9.23 35.39 2.24
3469 5864 1.338136 CCCAAGTCTGGCCGGATAGT 61.338 60.000 19.55 2.54 41.99 2.12
3470 5865 1.447643 CCCAAGTCTGGCCGGATAG 59.552 63.158 19.55 10.58 41.99 2.08
3471 5866 2.742116 GCCCAAGTCTGGCCGGATA 61.742 63.158 19.55 0.00 43.33 2.59
3472 5867 4.115199 GCCCAAGTCTGGCCGGAT 62.115 66.667 19.55 0.00 43.33 4.18
3478 5873 1.651240 CGCATGAAGCCCAAGTCTGG 61.651 60.000 0.00 0.00 43.10 3.86
3479 5874 1.651240 CCGCATGAAGCCCAAGTCTG 61.651 60.000 0.00 0.00 41.38 3.51
3480 5875 1.377725 CCGCATGAAGCCCAAGTCT 60.378 57.895 0.00 0.00 41.38 3.24
3481 5876 2.409870 CCCGCATGAAGCCCAAGTC 61.410 63.158 0.00 0.00 41.38 3.01
3482 5877 2.361610 CCCGCATGAAGCCCAAGT 60.362 61.111 0.00 0.00 41.38 3.16
3483 5878 2.045045 TCCCGCATGAAGCCCAAG 60.045 61.111 0.00 0.00 41.38 3.61
3484 5879 2.045045 CTCCCGCATGAAGCCCAA 60.045 61.111 0.00 0.00 41.38 4.12
3485 5880 3.008517 TCTCCCGCATGAAGCCCA 61.009 61.111 0.00 0.00 41.38 5.36
3486 5881 2.203126 CTCTCCCGCATGAAGCCC 60.203 66.667 0.00 0.00 41.38 5.19
3487 5882 0.813210 CTTCTCTCCCGCATGAAGCC 60.813 60.000 0.00 0.00 41.38 4.35
3488 5883 0.176680 TCTTCTCTCCCGCATGAAGC 59.823 55.000 0.00 0.00 36.72 3.86
3489 5884 2.548875 CTTCTTCTCTCCCGCATGAAG 58.451 52.381 0.00 0.00 37.75 3.02
3490 5885 1.208052 CCTTCTTCTCTCCCGCATGAA 59.792 52.381 0.00 0.00 0.00 2.57
3491 5886 0.826715 CCTTCTTCTCTCCCGCATGA 59.173 55.000 0.00 0.00 0.00 3.07
3492 5887 0.826715 TCCTTCTTCTCTCCCGCATG 59.173 55.000 0.00 0.00 0.00 4.06
3493 5888 1.118838 CTCCTTCTTCTCTCCCGCAT 58.881 55.000 0.00 0.00 0.00 4.73
3494 5889 0.039764 TCTCCTTCTTCTCTCCCGCA 59.960 55.000 0.00 0.00 0.00 5.69
3495 5890 1.068434 CATCTCCTTCTTCTCTCCCGC 59.932 57.143 0.00 0.00 0.00 6.13
3496 5891 2.660572 TCATCTCCTTCTTCTCTCCCG 58.339 52.381 0.00 0.00 0.00 5.14
3497 5892 3.578282 GGATCATCTCCTTCTTCTCTCCC 59.422 52.174 0.00 0.00 41.29 4.30
3498 5893 3.255642 CGGATCATCTCCTTCTTCTCTCC 59.744 52.174 0.00 0.00 42.47 3.71
3499 5894 3.888930 ACGGATCATCTCCTTCTTCTCTC 59.111 47.826 0.00 0.00 42.47 3.20
3500 5895 3.888930 GACGGATCATCTCCTTCTTCTCT 59.111 47.826 0.00 0.00 42.47 3.10
3501 5896 3.304391 CGACGGATCATCTCCTTCTTCTC 60.304 52.174 0.00 0.00 42.47 2.87
3502 5897 2.621055 CGACGGATCATCTCCTTCTTCT 59.379 50.000 0.00 0.00 42.47 2.85
3503 5898 2.860582 GCGACGGATCATCTCCTTCTTC 60.861 54.545 0.00 0.00 42.47 2.87
3504 5899 1.067821 GCGACGGATCATCTCCTTCTT 59.932 52.381 0.00 0.00 42.47 2.52
3505 5900 0.671251 GCGACGGATCATCTCCTTCT 59.329 55.000 0.00 0.00 42.47 2.85
3506 5901 0.661780 CGCGACGGATCATCTCCTTC 60.662 60.000 0.00 0.00 42.47 3.46
3507 5902 1.360551 CGCGACGGATCATCTCCTT 59.639 57.895 0.00 0.00 42.47 3.36
3508 5903 1.787057 GACGCGACGGATCATCTCCT 61.787 60.000 15.93 0.00 42.47 3.69
3509 5904 1.370657 GACGCGACGGATCATCTCC 60.371 63.158 15.93 0.00 41.07 3.71
3510 5905 1.722852 CGACGCGACGGATCATCTC 60.723 63.158 22.72 0.00 0.00 2.75
3511 5906 2.328289 CGACGCGACGGATCATCT 59.672 61.111 22.72 0.00 0.00 2.90
3512 5907 2.024305 ACGACGCGACGGATCATC 59.976 61.111 31.73 7.46 37.61 2.92
3513 5908 2.277949 CACGACGCGACGGATCAT 60.278 61.111 31.73 10.43 37.61 2.45
3516 5911 4.492160 ATGCACGACGCGACGGAT 62.492 61.111 31.73 18.54 46.97 4.18
3521 5916 4.829518 CTCCGATGCACGACGCGA 62.830 66.667 15.93 0.00 46.97 5.87
3522 5917 4.829518 TCTCCGATGCACGACGCG 62.830 66.667 3.53 3.53 46.97 6.01
3523 5918 2.506217 TTCTCCGATGCACGACGC 60.506 61.111 9.75 0.00 45.77 5.19
3524 5919 2.497092 CGTTCTCCGATGCACGACG 61.497 63.158 9.75 6.54 45.77 5.12
3525 5920 2.158959 CCGTTCTCCGATGCACGAC 61.159 63.158 9.75 0.73 45.77 4.34
3526 5921 2.180769 CCGTTCTCCGATGCACGA 59.819 61.111 9.75 0.00 45.77 4.35
3527 5922 3.554692 GCCGTTCTCCGATGCACG 61.555 66.667 0.00 0.00 39.56 5.34
3528 5923 3.554692 CGCCGTTCTCCGATGCAC 61.555 66.667 0.00 0.00 39.56 4.57
3529 5924 4.812476 CCGCCGTTCTCCGATGCA 62.812 66.667 0.00 0.00 39.56 3.96
3552 5947 2.492773 CCTTCCATGGCCGGATTGC 61.493 63.158 5.05 0.00 34.19 3.56
3553 5948 1.829533 CCCTTCCATGGCCGGATTG 60.830 63.158 17.79 0.00 34.19 2.67
3554 5949 2.284515 GACCCTTCCATGGCCGGATT 62.285 60.000 17.79 6.77 34.19 3.01
3555 5950 2.696125 ACCCTTCCATGGCCGGAT 60.696 61.111 17.79 0.70 34.19 4.18
3556 5951 3.407967 GACCCTTCCATGGCCGGA 61.408 66.667 17.79 0.00 0.00 5.14
3557 5952 4.506255 GGACCCTTCCATGGCCGG 62.506 72.222 6.96 9.54 42.30 6.13
3558 5953 2.499303 AAAGGACCCTTCCATGGCCG 62.499 60.000 6.96 0.00 45.72 6.13
3559 5954 0.972471 CAAAGGACCCTTCCATGGCC 60.972 60.000 6.96 0.00 45.72 5.36
3560 5955 1.607801 GCAAAGGACCCTTCCATGGC 61.608 60.000 6.96 0.00 45.72 4.40
3561 5956 0.972471 GGCAAAGGACCCTTCCATGG 60.972 60.000 4.97 4.97 45.72 3.66
3562 5957 0.040204 AGGCAAAGGACCCTTCCATG 59.960 55.000 1.22 0.00 45.72 3.66
3563 5958 1.681229 TAGGCAAAGGACCCTTCCAT 58.319 50.000 1.22 0.00 45.72 3.41
3564 5959 1.354368 CTTAGGCAAAGGACCCTTCCA 59.646 52.381 1.22 0.00 45.72 3.53
3565 5960 2.130272 CTTAGGCAAAGGACCCTTCC 57.870 55.000 1.22 0.35 43.22 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.