Multiple sequence alignment - TraesCS3B01G128000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G128000 chr3B 100.000 6634 0 0 1 6634 106962092 106968725 0.000000e+00 12251.0
1 TraesCS3B01G128000 chr3B 100.000 64 0 0 1885 1948 106963913 106963976 1.170000e-22 119.0
2 TraesCS3B01G128000 chr3B 100.000 64 0 0 1822 1885 106963976 106964039 1.170000e-22 119.0
3 TraesCS3B01G128000 chr3D 95.099 4081 108 26 1922 5946 64371384 64375428 0.000000e+00 6344.0
4 TraesCS3B01G128000 chr3D 88.530 1796 80 45 123 1847 64369601 64371341 0.000000e+00 2060.0
5 TraesCS3B01G128000 chr3A 94.554 4113 128 27 1885 5946 74782766 74786833 0.000000e+00 6266.0
6 TraesCS3B01G128000 chr3A 89.207 1816 85 41 123 1885 74781065 74782822 0.000000e+00 2165.0
7 TraesCS3B01G128000 chr3A 90.196 102 8 2 1 102 419941319 419941220 1.500000e-26 132.0
8 TraesCS3B01G128000 chr7B 86.567 134 16 2 6041 6172 632487661 632487794 5.360000e-31 147.0
9 TraesCS3B01G128000 chr7B 83.846 130 19 2 6041 6168 2344166 2344295 9.030000e-24 122.0
10 TraesCS3B01G128000 chr4A 85.821 134 17 2 6041 6172 660523853 660523986 2.490000e-29 141.0
11 TraesCS3B01G128000 chr4A 85.600 125 16 2 6053 6175 677729380 677729256 5.400000e-26 130.0
12 TraesCS3B01G128000 chr4A 83.333 138 21 2 6040 6175 75320434 75320571 6.980000e-25 126.0
13 TraesCS3B01G128000 chr2A 90.476 105 9 1 1 104 698136348 698136452 3.230000e-28 137.0
14 TraesCS3B01G128000 chr2A 94.915 59 3 0 6576 6634 20729374 20729432 7.080000e-15 93.5
15 TraesCS3B01G128000 chr2A 91.045 67 5 1 6569 6634 57865382 57865448 9.160000e-14 89.8
16 TraesCS3B01G128000 chr6D 90.291 103 8 1 1 103 203051865 203051765 4.170000e-27 134.0
17 TraesCS3B01G128000 chr6D 88.525 61 5 1 5989 6047 90133355 90133415 9.230000e-09 73.1
18 TraesCS3B01G128000 chr7A 89.524 105 10 1 7 111 169685131 169685028 1.500000e-26 132.0
19 TraesCS3B01G128000 chr7A 89.320 103 9 2 1 103 619566771 619566871 1.940000e-25 128.0
20 TraesCS3B01G128000 chr2D 91.667 96 7 1 7 102 179332666 179332760 1.500000e-26 132.0
21 TraesCS3B01G128000 chr2B 90.816 98 9 0 7 104 464822670 464822573 1.500000e-26 132.0
22 TraesCS3B01G128000 chr2B 88.710 62 4 2 5989 6047 518050390 518050329 9.230000e-09 73.1
23 TraesCS3B01G128000 chr1A 89.320 103 11 0 1 103 584430755 584430857 5.400000e-26 130.0
24 TraesCS3B01G128000 chr1A 94.915 59 3 0 6576 6634 578925804 578925746 7.080000e-15 93.5
25 TraesCS3B01G128000 chr5A 89.320 103 10 1 1 103 396382183 396382284 1.940000e-25 128.0
26 TraesCS3B01G128000 chr5A 82.353 136 22 2 6042 6175 26532161 26532026 4.200000e-22 117.0
27 TraesCS3B01G128000 chr7D 83.212 137 21 2 6041 6175 448755406 448755542 2.510000e-24 124.0
28 TraesCS3B01G128000 chr5D 83.212 137 20 2 6041 6175 10782803 10782938 9.030000e-24 122.0
29 TraesCS3B01G128000 chr1B 82.353 136 22 2 6042 6175 643174847 643174982 4.200000e-22 117.0
30 TraesCS3B01G128000 chr1B 93.443 61 4 0 6574 6634 582724563 582724623 2.550000e-14 91.6
31 TraesCS3B01G128000 chr4B 91.026 78 7 0 5155 5232 653741829 653741752 9.100000e-19 106.0
32 TraesCS3B01G128000 chr4B 89.855 69 6 1 6566 6634 529838368 529838301 3.300000e-13 87.9
33 TraesCS3B01G128000 chr6B 92.063 63 5 0 6572 6634 481623025 481622963 9.160000e-14 89.8
34 TraesCS3B01G128000 chr6B 94.118 51 2 1 5993 6043 52217716 52217765 7.130000e-10 76.8
35 TraesCS3B01G128000 chr5B 92.188 64 4 1 6572 6634 572978506 572978443 9.160000e-14 89.8
36 TraesCS3B01G128000 chr5B 88.158 76 6 2 6562 6634 441672025 441671950 3.300000e-13 87.9
37 TraesCS3B01G128000 chr5B 96.226 53 2 0 6582 6634 592070507 592070455 3.300000e-13 87.9
38 TraesCS3B01G128000 chrUn 88.060 67 4 3 5981 6043 339419660 339419726 7.130000e-10 76.8
39 TraesCS3B01G128000 chrUn 88.060 67 4 3 5981 6043 339422230 339422296 7.130000e-10 76.8
40 TraesCS3B01G128000 chrUn 88.060 67 4 3 5981 6043 389022367 389022433 7.130000e-10 76.8
41 TraesCS3B01G128000 chr4D 85.915 71 7 2 5981 6048 355565113 355565183 9.230000e-09 73.1
42 TraesCS3B01G128000 chr4D 89.286 56 3 2 5981 6033 355442433 355442488 4.290000e-07 67.6
43 TraesCS3B01G128000 chr1D 88.333 60 3 3 5987 6043 440954684 440954626 1.190000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G128000 chr3B 106962092 106968725 6633 False 12251.0 12251 100.0000 1 6634 1 chr3B.!!$F1 6633
1 TraesCS3B01G128000 chr3D 64369601 64375428 5827 False 4202.0 6344 91.8145 123 5946 2 chr3D.!!$F1 5823
2 TraesCS3B01G128000 chr3A 74781065 74786833 5768 False 4215.5 6266 91.8805 123 5946 2 chr3A.!!$F1 5823

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
270 274 0.316841 TCGGAAAGCCAACCAAATGC 59.683 50.0 0.00 0.00 0.00 3.56 F
1808 1916 0.527565 CCCCTGACAGCGAAATTTGG 59.472 55.0 0.00 0.00 0.00 3.28 F
2085 2210 0.033796 ATGGACAATCCTGCAGTGGG 60.034 55.0 13.81 0.00 37.46 4.61 F
2093 2218 0.407528 TCCTGCAGTGGGCCAAATAA 59.592 50.0 8.40 0.00 43.89 1.40 F
2094 2219 0.819582 CCTGCAGTGGGCCAAATAAG 59.180 55.0 8.40 4.01 43.89 1.73 F
3953 4087 1.442769 ACACATCTGACGGTGCATTC 58.557 50.0 10.25 0.00 38.57 2.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2072 2189 0.252375 ATTTGGCCCACTGCAGGATT 60.252 50.000 19.93 0.0 43.89 3.01 R
2695 2822 0.621571 TCCCATACTTCTGGCAGGCT 60.622 55.000 15.73 0.0 34.77 4.58 R
3953 4087 0.392193 CCAGTTCCAGCCTGCAGTAG 60.392 60.000 13.81 0.0 0.00 2.57 R
4172 4315 9.863845 TCTGTGTTCAAAATCAATATCGTACTA 57.136 29.630 0.00 0.0 0.00 1.82 R
4173 4316 8.656849 GTCTGTGTTCAAAATCAATATCGTACT 58.343 33.333 0.00 0.0 0.00 2.73 R
5949 6112 2.151502 TGAAACTTTTGCACCCTCCA 57.848 45.000 0.00 0.0 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.751060 TGGGTTGTAGCTACAAATACTCG 58.249 43.478 34.72 0.00 46.54 4.18
23 24 4.117685 GGGTTGTAGCTACAAATACTCGG 58.882 47.826 34.72 0.00 46.54 4.63
24 25 4.142093 GGGTTGTAGCTACAAATACTCGGA 60.142 45.833 34.72 12.35 46.54 4.55
25 26 5.452917 GGGTTGTAGCTACAAATACTCGGAT 60.453 44.000 34.72 0.00 46.54 4.18
26 27 6.047231 GGTTGTAGCTACAAATACTCGGATT 58.953 40.000 34.72 0.00 46.54 3.01
27 28 7.205297 GGTTGTAGCTACAAATACTCGGATTA 58.795 38.462 34.72 10.94 46.54 1.75
28 29 7.871463 GGTTGTAGCTACAAATACTCGGATTAT 59.129 37.037 34.72 0.00 46.54 1.28
29 30 9.903682 GTTGTAGCTACAAATACTCGGATTATA 57.096 33.333 34.72 9.90 46.54 0.98
31 32 9.511272 TGTAGCTACAAATACTCGGATTATAGA 57.489 33.333 24.15 0.00 32.40 1.98
32 33 9.771915 GTAGCTACAAATACTCGGATTATAGAC 57.228 37.037 19.15 0.00 0.00 2.59
33 34 7.828712 AGCTACAAATACTCGGATTATAGACC 58.171 38.462 0.00 0.00 0.00 3.85
34 35 7.450634 AGCTACAAATACTCGGATTATAGACCA 59.549 37.037 0.00 0.00 0.00 4.02
35 36 8.251721 GCTACAAATACTCGGATTATAGACCAT 58.748 37.037 0.00 0.00 0.00 3.55
38 39 9.847224 ACAAATACTCGGATTATAGACCATTTT 57.153 29.630 0.00 0.00 0.00 1.82
40 41 9.503399 AAATACTCGGATTATAGACCATTTTCC 57.497 33.333 0.00 0.00 0.00 3.13
41 42 5.539048 ACTCGGATTATAGACCATTTTCCG 58.461 41.667 2.20 2.20 39.51 4.30
42 43 5.070047 ACTCGGATTATAGACCATTTTCCGT 59.930 40.000 8.15 0.00 39.33 4.69
43 44 6.266103 ACTCGGATTATAGACCATTTTCCGTA 59.734 38.462 8.15 0.00 39.33 4.02
44 45 7.053316 TCGGATTATAGACCATTTTCCGTAA 57.947 36.000 8.15 0.00 39.33 3.18
45 46 7.499292 TCGGATTATAGACCATTTTCCGTAAA 58.501 34.615 8.15 0.00 39.33 2.01
46 47 8.152246 TCGGATTATAGACCATTTTCCGTAAAT 58.848 33.333 8.15 0.00 39.33 1.40
47 48 8.780249 CGGATTATAGACCATTTTCCGTAAATT 58.220 33.333 0.00 0.00 36.20 1.82
53 54 9.797556 ATAGACCATTTTCCGTAAATTAAAAGC 57.202 29.630 0.00 0.00 34.19 3.51
54 55 6.804783 AGACCATTTTCCGTAAATTAAAAGCG 59.195 34.615 0.00 0.00 34.19 4.68
55 56 6.448852 ACCATTTTCCGTAAATTAAAAGCGT 58.551 32.000 0.00 0.00 34.19 5.07
56 57 6.363896 ACCATTTTCCGTAAATTAAAAGCGTG 59.636 34.615 0.00 0.00 34.19 5.34
57 58 6.363896 CCATTTTCCGTAAATTAAAAGCGTGT 59.636 34.615 0.00 0.00 34.19 4.49
58 59 6.735263 TTTTCCGTAAATTAAAAGCGTGTG 57.265 33.333 0.00 0.00 0.00 3.82
59 60 4.407496 TCCGTAAATTAAAAGCGTGTGG 57.593 40.909 0.00 0.00 0.00 4.17
60 61 3.814283 TCCGTAAATTAAAAGCGTGTGGT 59.186 39.130 0.00 0.00 0.00 4.16
61 62 4.993584 TCCGTAAATTAAAAGCGTGTGGTA 59.006 37.500 0.00 0.00 0.00 3.25
62 63 5.642919 TCCGTAAATTAAAAGCGTGTGGTAT 59.357 36.000 0.00 0.00 0.00 2.73
63 64 6.149142 TCCGTAAATTAAAAGCGTGTGGTATT 59.851 34.615 0.00 0.00 0.00 1.89
64 65 6.466730 CCGTAAATTAAAAGCGTGTGGTATTC 59.533 38.462 0.00 0.00 0.00 1.75
65 66 7.238571 CGTAAATTAAAAGCGTGTGGTATTCT 58.761 34.615 0.00 0.00 0.00 2.40
66 67 7.747357 CGTAAATTAAAAGCGTGTGGTATTCTT 59.253 33.333 0.00 0.00 0.00 2.52
67 68 9.401873 GTAAATTAAAAGCGTGTGGTATTCTTT 57.598 29.630 0.00 0.00 0.00 2.52
68 69 8.880878 AAATTAAAAGCGTGTGGTATTCTTTT 57.119 26.923 0.00 0.00 39.43 2.27
69 70 8.515473 AATTAAAAGCGTGTGGTATTCTTTTC 57.485 30.769 0.00 0.00 37.85 2.29
70 71 5.767816 AAAAGCGTGTGGTATTCTTTTCT 57.232 34.783 0.00 0.00 33.27 2.52
71 72 5.358298 AAAGCGTGTGGTATTCTTTTCTC 57.642 39.130 0.00 0.00 0.00 2.87
72 73 3.335579 AGCGTGTGGTATTCTTTTCTCC 58.664 45.455 0.00 0.00 0.00 3.71
73 74 2.418976 GCGTGTGGTATTCTTTTCTCCC 59.581 50.000 0.00 0.00 0.00 4.30
74 75 2.671396 CGTGTGGTATTCTTTTCTCCCG 59.329 50.000 0.00 0.00 0.00 5.14
75 76 3.671716 GTGTGGTATTCTTTTCTCCCGT 58.328 45.455 0.00 0.00 0.00 5.28
76 77 4.070009 GTGTGGTATTCTTTTCTCCCGTT 58.930 43.478 0.00 0.00 0.00 4.44
77 78 4.069304 TGTGGTATTCTTTTCTCCCGTTG 58.931 43.478 0.00 0.00 0.00 4.10
78 79 3.078837 TGGTATTCTTTTCTCCCGTTGC 58.921 45.455 0.00 0.00 0.00 4.17
79 80 3.078837 GGTATTCTTTTCTCCCGTTGCA 58.921 45.455 0.00 0.00 0.00 4.08
80 81 3.504520 GGTATTCTTTTCTCCCGTTGCAA 59.495 43.478 0.00 0.00 0.00 4.08
81 82 3.643159 ATTCTTTTCTCCCGTTGCAAC 57.357 42.857 19.89 19.89 0.00 4.17
82 83 2.045561 TCTTTTCTCCCGTTGCAACA 57.954 45.000 28.01 9.07 0.00 3.33
83 84 2.370349 TCTTTTCTCCCGTTGCAACAA 58.630 42.857 28.01 12.35 0.00 2.83
84 85 2.755655 TCTTTTCTCCCGTTGCAACAAA 59.244 40.909 28.01 17.30 0.00 2.83
85 86 2.570442 TTTCTCCCGTTGCAACAAAC 57.430 45.000 28.01 3.05 0.00 2.93
93 94 2.844122 GTTGCAACAAACGGACTCTT 57.156 45.000 24.52 0.00 0.00 2.85
94 95 3.145212 GTTGCAACAAACGGACTCTTT 57.855 42.857 24.52 0.00 0.00 2.52
95 96 3.507786 GTTGCAACAAACGGACTCTTTT 58.492 40.909 24.52 0.00 0.00 2.27
96 97 3.143807 TGCAACAAACGGACTCTTTTG 57.856 42.857 0.00 0.00 37.89 2.44
97 98 1.852280 GCAACAAACGGACTCTTTTGC 59.148 47.619 0.00 0.00 36.10 3.68
98 99 2.479560 GCAACAAACGGACTCTTTTGCT 60.480 45.455 0.00 0.00 36.10 3.91
99 100 3.242936 GCAACAAACGGACTCTTTTGCTA 60.243 43.478 0.00 0.00 36.10 3.49
100 101 4.527564 CAACAAACGGACTCTTTTGCTAG 58.472 43.478 0.00 0.00 36.10 3.42
101 102 3.805207 ACAAACGGACTCTTTTGCTAGT 58.195 40.909 0.00 0.00 36.10 2.57
102 103 4.952460 ACAAACGGACTCTTTTGCTAGTA 58.048 39.130 0.00 0.00 36.10 1.82
103 104 5.548406 ACAAACGGACTCTTTTGCTAGTAT 58.452 37.500 0.00 0.00 36.10 2.12
104 105 5.408604 ACAAACGGACTCTTTTGCTAGTATG 59.591 40.000 0.00 0.00 36.10 2.39
105 106 5.401531 AACGGACTCTTTTGCTAGTATGA 57.598 39.130 0.00 0.00 0.00 2.15
106 107 4.745649 ACGGACTCTTTTGCTAGTATGAC 58.254 43.478 0.00 0.00 0.00 3.06
107 108 4.463186 ACGGACTCTTTTGCTAGTATGACT 59.537 41.667 0.00 0.00 0.00 3.41
108 109 5.047235 ACGGACTCTTTTGCTAGTATGACTT 60.047 40.000 0.00 0.00 0.00 3.01
109 110 6.152323 ACGGACTCTTTTGCTAGTATGACTTA 59.848 38.462 0.00 0.00 0.00 2.24
110 111 7.033791 CGGACTCTTTTGCTAGTATGACTTAA 58.966 38.462 0.00 0.00 0.00 1.85
111 112 7.544566 CGGACTCTTTTGCTAGTATGACTTAAA 59.455 37.037 0.00 0.00 0.00 1.52
112 113 9.216117 GGACTCTTTTGCTAGTATGACTTAAAA 57.784 33.333 0.00 0.00 0.00 1.52
119 120 8.867112 TTGCTAGTATGACTTAAAATACGAGG 57.133 34.615 0.00 3.69 34.45 4.63
120 121 7.431249 TGCTAGTATGACTTAAAATACGAGGG 58.569 38.462 0.00 0.00 34.45 4.30
121 122 6.867293 GCTAGTATGACTTAAAATACGAGGGG 59.133 42.308 0.00 0.00 34.45 4.79
122 123 5.608449 AGTATGACTTAAAATACGAGGGGC 58.392 41.667 0.00 0.00 34.98 5.80
123 124 3.985019 TGACTTAAAATACGAGGGGCA 57.015 42.857 0.00 0.00 0.00 5.36
124 125 3.602483 TGACTTAAAATACGAGGGGCAC 58.398 45.455 0.00 0.00 0.00 5.01
125 126 3.008157 TGACTTAAAATACGAGGGGCACA 59.992 43.478 0.00 0.00 0.00 4.57
126 127 4.004982 GACTTAAAATACGAGGGGCACAA 58.995 43.478 0.00 0.00 0.00 3.33
127 128 4.400120 ACTTAAAATACGAGGGGCACAAA 58.600 39.130 0.00 0.00 0.00 2.83
128 129 4.216902 ACTTAAAATACGAGGGGCACAAAC 59.783 41.667 0.00 0.00 0.00 2.93
132 133 1.310904 TACGAGGGGCACAAACAAAC 58.689 50.000 0.00 0.00 0.00 2.93
138 139 1.047801 GGGCACAAACAAACCAGGAT 58.952 50.000 0.00 0.00 0.00 3.24
139 140 1.416030 GGGCACAAACAAACCAGGATT 59.584 47.619 0.00 0.00 0.00 3.01
144 145 3.384467 CACAAACAAACCAGGATTGAGGT 59.616 43.478 16.13 7.77 40.61 3.85
146 147 4.583073 ACAAACAAACCAGGATTGAGGTAC 59.417 41.667 16.13 0.00 37.07 3.34
149 150 5.161943 ACAAACCAGGATTGAGGTACTAC 57.838 43.478 16.13 0.00 41.55 2.73
153 154 5.202746 ACCAGGATTGAGGTACTACAGTA 57.797 43.478 0.00 0.00 41.55 2.74
226 227 4.494350 AACATGAATGTGACAGTTCTGC 57.506 40.909 0.00 0.00 41.61 4.26
269 273 2.810439 TTCGGAAAGCCAACCAAATG 57.190 45.000 0.00 0.00 0.00 2.32
270 274 0.316841 TCGGAAAGCCAACCAAATGC 59.683 50.000 0.00 0.00 0.00 3.56
309 313 7.389330 TGAAATTTCTCGTTACATTTCTGGCTA 59.611 33.333 18.64 0.00 36.82 3.93
312 316 5.250235 TCTCGTTACATTTCTGGCTAGAG 57.750 43.478 0.00 0.00 33.70 2.43
316 320 6.460781 TCGTTACATTTCTGGCTAGAGAAAA 58.539 36.000 9.86 0.00 43.47 2.29
319 323 7.095187 CGTTACATTTCTGGCTAGAGAAAAGTT 60.095 37.037 15.67 5.76 43.47 2.66
369 374 2.046507 CTGGTCACCAGCCAGCTC 60.047 66.667 12.03 0.00 45.13 4.09
371 376 3.640407 GGTCACCAGCCAGCTCCA 61.640 66.667 0.00 0.00 0.00 3.86
374 379 3.957586 CACCAGCCAGCTCCACCA 61.958 66.667 0.00 0.00 0.00 4.17
375 380 2.937689 ACCAGCCAGCTCCACCAT 60.938 61.111 0.00 0.00 0.00 3.55
376 381 2.124403 CCAGCCAGCTCCACCATC 60.124 66.667 0.00 0.00 0.00 3.51
377 382 2.672908 CAGCCAGCTCCACCATCA 59.327 61.111 0.00 0.00 0.00 3.07
393 398 2.643551 CATCATGTAAAACGGGAGGCT 58.356 47.619 0.00 0.00 0.00 4.58
438 446 2.286025 ACCGCGGCGAATTAAAGTATTC 59.714 45.455 28.58 0.00 0.00 1.75
439 447 2.349155 CCGCGGCGAATTAAAGTATTCC 60.349 50.000 25.92 0.00 32.12 3.01
440 448 2.658224 CGCGGCGAATTAAAGTATTCCG 60.658 50.000 19.16 0.00 32.12 4.30
442 450 2.349155 CGGCGAATTAAAGTATTCCGCC 60.349 50.000 0.00 12.21 43.16 6.13
443 451 2.349155 GGCGAATTAAAGTATTCCGCCG 60.349 50.000 0.00 0.00 40.61 6.46
526 563 2.362632 CTCCCTCTCGTCCCCGTT 60.363 66.667 0.00 0.00 35.01 4.44
537 574 3.015145 CCCCGTTCCATCCCACCT 61.015 66.667 0.00 0.00 0.00 4.00
608 648 2.899838 AAGCGCGCAACCAACTCA 60.900 55.556 35.10 0.00 0.00 3.41
712 763 3.834799 CCTCCCTGGTACGGACGC 61.835 72.222 0.00 0.00 36.31 5.19
713 764 3.834799 CTCCCTGGTACGGACGCC 61.835 72.222 0.00 0.00 36.31 5.68
714 765 4.682334 TCCCTGGTACGGACGCCA 62.682 66.667 0.00 0.00 36.31 5.69
715 766 4.446413 CCCTGGTACGGACGCCAC 62.446 72.222 0.00 0.00 36.31 5.01
716 767 4.789075 CCTGGTACGGACGCCACG 62.789 72.222 0.00 0.00 36.31 4.94
717 768 4.789075 CTGGTACGGACGCCACGG 62.789 72.222 0.00 0.00 36.31 4.94
864 936 2.983803 GCTTCGTGTGTTTGTGTTTTGT 59.016 40.909 0.00 0.00 0.00 2.83
890 962 4.742201 GCAGTGGAAGCGCGGAGA 62.742 66.667 8.83 0.00 0.00 3.71
927 999 2.125912 GACGGATGCACGAGCTGT 60.126 61.111 6.36 0.00 42.74 4.40
1062 1152 4.821589 GCCGAGAAGGAGGTGGCG 62.822 72.222 0.00 0.00 45.00 5.69
1248 1339 4.974645 TCGATCCATTTGGGTTAGCTAT 57.025 40.909 0.00 0.00 38.11 2.97
1270 1364 4.314440 TTTCCTCCGCGTGCTGCT 62.314 61.111 4.92 0.00 43.27 4.24
1272 1366 4.742201 TCCTCCGCGTGCTGCTTC 62.742 66.667 4.92 0.00 43.27 3.86
1293 1391 7.948278 CTTCGCCTAAGCTATACTAATGTTT 57.052 36.000 0.00 0.00 36.60 2.83
1295 1393 9.472361 CTTCGCCTAAGCTATACTAATGTTTTA 57.528 33.333 0.00 0.00 36.60 1.52
1296 1394 8.807667 TCGCCTAAGCTATACTAATGTTTTAC 57.192 34.615 0.00 0.00 36.60 2.01
1327 1426 2.069273 CAGAACTTTGACGTGCCTAGG 58.931 52.381 3.67 3.67 0.00 3.02
1377 1476 4.475944 CATCACCCGAAACAAATCTGAAC 58.524 43.478 0.00 0.00 0.00 3.18
1486 1585 1.098712 TGTTGTTTCCTCGCACCCAC 61.099 55.000 0.00 0.00 0.00 4.61
1682 1788 4.499183 ACGAATTGGCTGTTTTGTTTTGA 58.501 34.783 0.00 0.00 0.00 2.69
1683 1789 5.115480 ACGAATTGGCTGTTTTGTTTTGAT 58.885 33.333 0.00 0.00 0.00 2.57
1684 1790 5.584251 ACGAATTGGCTGTTTTGTTTTGATT 59.416 32.000 0.00 0.00 0.00 2.57
1685 1791 6.093357 ACGAATTGGCTGTTTTGTTTTGATTT 59.907 30.769 0.00 0.00 0.00 2.17
1686 1792 6.966066 CGAATTGGCTGTTTTGTTTTGATTTT 59.034 30.769 0.00 0.00 0.00 1.82
1687 1793 7.044836 CGAATTGGCTGTTTTGTTTTGATTTTG 60.045 33.333 0.00 0.00 0.00 2.44
1808 1916 0.527565 CCCCTGACAGCGAAATTTGG 59.472 55.000 0.00 0.00 0.00 3.28
1847 1955 1.820519 TCGACAGCCGTATGGTAAACT 59.179 47.619 2.17 0.00 39.75 2.66
1848 1956 2.231964 TCGACAGCCGTATGGTAAACTT 59.768 45.455 2.17 0.00 39.75 2.66
1849 1957 2.997986 CGACAGCCGTATGGTAAACTTT 59.002 45.455 2.17 0.00 37.67 2.66
1850 1958 4.082300 TCGACAGCCGTATGGTAAACTTTA 60.082 41.667 2.17 0.00 39.75 1.85
1851 1959 4.032104 CGACAGCCGTATGGTAAACTTTAC 59.968 45.833 2.17 3.38 37.67 2.01
1853 1961 5.173664 ACAGCCGTATGGTAAACTTTACTC 58.826 41.667 10.77 3.38 37.67 2.59
1855 1963 3.553105 GCCGTATGGTAAACTTTACTCCG 59.447 47.826 10.77 8.08 37.67 4.63
1857 1965 5.678616 GCCGTATGGTAAACTTTACTCCGTA 60.679 44.000 10.77 0.38 37.67 4.02
1858 1966 5.973565 CCGTATGGTAAACTTTACTCCGTAG 59.026 44.000 10.77 1.15 0.00 3.51
1859 1967 5.456822 CGTATGGTAAACTTTACTCCGTAGC 59.543 44.000 10.77 0.00 0.00 3.58
1860 1968 4.870123 TGGTAAACTTTACTCCGTAGCA 57.130 40.909 10.77 0.00 0.00 3.49
1861 1969 5.410355 TGGTAAACTTTACTCCGTAGCAT 57.590 39.130 10.77 0.00 0.00 3.79
1863 1971 7.116075 TGGTAAACTTTACTCCGTAGCATAT 57.884 36.000 10.77 0.00 0.00 1.78
1864 1972 8.236585 TGGTAAACTTTACTCCGTAGCATATA 57.763 34.615 10.77 0.00 0.00 0.86
1865 1973 8.694540 TGGTAAACTTTACTCCGTAGCATATAA 58.305 33.333 10.77 0.00 0.00 0.98
1871 1979 9.609346 ACTTTACTCCGTAGCATATAATTTTGT 57.391 29.630 0.00 0.00 0.00 2.83
1897 2005 7.988904 ATAGTTAACTAACTGAATCGACAGC 57.011 36.000 18.88 0.00 45.44 4.40
1898 2006 5.169295 AGTTAACTAACTGAATCGACAGCC 58.831 41.667 6.26 0.00 44.30 4.85
1899 2007 2.279582 ACTAACTGAATCGACAGCCG 57.720 50.000 3.10 0.00 41.06 5.52
1900 2008 1.544691 ACTAACTGAATCGACAGCCGT 59.455 47.619 3.10 0.00 41.06 5.68
1901 2009 2.751259 ACTAACTGAATCGACAGCCGTA 59.249 45.455 3.10 0.00 41.06 4.02
1902 2010 2.961526 AACTGAATCGACAGCCGTAT 57.038 45.000 3.10 0.00 41.06 3.06
1903 2011 2.209838 ACTGAATCGACAGCCGTATG 57.790 50.000 3.10 0.00 41.06 2.39
1904 2012 1.202417 ACTGAATCGACAGCCGTATGG 60.202 52.381 3.10 0.00 41.06 2.74
1905 2013 0.821517 TGAATCGACAGCCGTATGGT 59.178 50.000 2.17 0.00 39.75 3.55
1906 2014 2.025898 TGAATCGACAGCCGTATGGTA 58.974 47.619 2.17 0.00 39.75 3.25
1907 2015 2.427812 TGAATCGACAGCCGTATGGTAA 59.572 45.455 2.17 0.00 39.75 2.85
1908 2016 3.119065 TGAATCGACAGCCGTATGGTAAA 60.119 43.478 2.17 0.00 39.75 2.01
1909 2017 2.282701 TCGACAGCCGTATGGTAAAC 57.717 50.000 2.17 0.00 39.75 2.01
1910 2018 1.820519 TCGACAGCCGTATGGTAAACT 59.179 47.619 2.17 0.00 39.75 2.66
1911 2019 2.231964 TCGACAGCCGTATGGTAAACTT 59.768 45.455 2.17 0.00 39.75 2.66
1912 2020 2.997986 CGACAGCCGTATGGTAAACTTT 59.002 45.455 2.17 0.00 37.67 2.66
1913 2021 4.082300 TCGACAGCCGTATGGTAAACTTTA 60.082 41.667 2.17 0.00 39.75 1.85
1914 2022 4.032104 CGACAGCCGTATGGTAAACTTTAC 59.968 45.833 2.17 3.38 37.67 2.01
1915 2023 5.156608 ACAGCCGTATGGTAAACTTTACT 57.843 39.130 10.77 0.00 37.67 2.24
1916 2024 5.173664 ACAGCCGTATGGTAAACTTTACTC 58.826 41.667 10.77 3.38 37.67 2.59
1917 2025 4.569564 CAGCCGTATGGTAAACTTTACTCC 59.430 45.833 10.77 0.00 37.67 3.85
1918 2026 3.553105 GCCGTATGGTAAACTTTACTCCG 59.447 47.826 10.77 8.08 37.67 4.63
1925 2033 6.528537 TGGTAAACTTTACTCCGTAGCATA 57.471 37.500 10.77 0.00 0.00 3.14
1987 2095 6.512297 GGTAATTTCAGCAAGGAAAGTCAAA 58.488 36.000 2.51 0.00 39.88 2.69
1988 2096 6.983890 GGTAATTTCAGCAAGGAAAGTCAAAA 59.016 34.615 2.51 0.00 39.88 2.44
2006 2114 2.194201 AAGTACCCAATTGACCACGG 57.806 50.000 7.12 1.23 0.00 4.94
2007 2115 1.061546 AGTACCCAATTGACCACGGT 58.938 50.000 7.12 7.77 0.00 4.83
2008 2116 1.161843 GTACCCAATTGACCACGGTG 58.838 55.000 7.12 0.00 0.00 4.94
2013 2121 2.298729 CCCAATTGACCACGGTGATTTT 59.701 45.455 10.28 0.00 0.00 1.82
2015 2123 4.380444 CCCAATTGACCACGGTGATTTTAG 60.380 45.833 10.28 0.00 0.00 1.85
2020 2128 6.452494 TTGACCACGGTGATTTTAGAAAAA 57.548 33.333 10.28 0.00 0.00 1.94
2021 2129 5.823353 TGACCACGGTGATTTTAGAAAAAC 58.177 37.500 10.28 0.00 0.00 2.43
2022 2130 5.190992 ACCACGGTGATTTTAGAAAAACC 57.809 39.130 10.28 0.00 0.00 3.27
2024 2132 5.361571 ACCACGGTGATTTTAGAAAAACCTT 59.638 36.000 10.28 0.00 30.26 3.50
2069 2186 6.028146 TGGAAGATTGTTTCATGTCAATGG 57.972 37.500 14.38 0.00 34.92 3.16
2085 2210 0.033796 ATGGACAATCCTGCAGTGGG 60.034 55.000 13.81 0.00 37.46 4.61
2087 2212 2.036256 ACAATCCTGCAGTGGGCC 59.964 61.111 13.81 0.00 43.89 5.80
2088 2213 2.036098 CAATCCTGCAGTGGGCCA 59.964 61.111 13.81 0.00 43.89 5.36
2093 2218 0.407528 TCCTGCAGTGGGCCAAATAA 59.592 50.000 8.40 0.00 43.89 1.40
2094 2219 0.819582 CCTGCAGTGGGCCAAATAAG 59.180 55.000 8.40 4.01 43.89 1.73
2506 2633 4.989279 ATGTAATGCAGCGAATTCCTTT 57.011 36.364 0.00 0.00 0.00 3.11
2539 2666 1.494960 AAAACCCACACTGCACCAAT 58.505 45.000 0.00 0.00 0.00 3.16
2815 2944 8.413229 ACTTGCAAGAATTATGTACTGTGTTTT 58.587 29.630 32.50 0.00 0.00 2.43
2983 3112 9.862371 CTTGTCTAATTAGCTTCTTACTTCAGA 57.138 33.333 7.67 0.00 0.00 3.27
3183 3312 6.365789 GCTATCAACAAGCTGCAAAAACAATA 59.634 34.615 1.02 0.00 37.01 1.90
3561 3692 9.807649 ATCACAATAATACTGAATTTCCTTTGC 57.192 29.630 0.00 0.00 0.00 3.68
3562 3693 8.801299 TCACAATAATACTGAATTTCCTTTGCA 58.199 29.630 0.00 0.00 0.00 4.08
3593 3724 2.629137 AGACTTTGCCAATCACAATGCA 59.371 40.909 0.00 0.00 0.00 3.96
3809 3943 3.582647 TCCTTGCAGGTCTGTTATCTTCA 59.417 43.478 0.00 0.00 36.53 3.02
3953 4087 1.442769 ACACATCTGACGGTGCATTC 58.557 50.000 10.25 0.00 38.57 2.67
4038 4172 3.572584 GCTCAGGCTTTCAAAATGTCAG 58.427 45.455 0.00 0.00 35.22 3.51
4045 4179 3.737663 GCTTTCAAAATGTCAGTGTGGCA 60.738 43.478 0.00 0.00 35.91 4.92
4172 4315 6.326583 TGGATTCGAAGGTATGGAGAGTTATT 59.673 38.462 3.35 0.00 0.00 1.40
4173 4316 7.507956 TGGATTCGAAGGTATGGAGAGTTATTA 59.492 37.037 3.35 0.00 0.00 0.98
4495 4648 2.419297 GCTGATCGGAACATCTGGAGTT 60.419 50.000 5.48 0.00 0.00 3.01
4498 4651 0.613260 TCGGAACATCTGGAGTTGGG 59.387 55.000 0.00 0.00 0.00 4.12
4681 4834 4.158209 TCATTGTCAAATCCAACATCGCAT 59.842 37.500 0.00 0.00 0.00 4.73
4718 4871 4.661222 TGAAGAAGCATACAAATGGACCA 58.339 39.130 0.00 0.00 33.38 4.02
4742 4895 4.518970 AGGTTAGTTTGCCAACATACACAG 59.481 41.667 3.22 0.00 35.05 3.66
4760 4913 1.132643 CAGAGAGCTGGCTGCAAATTC 59.867 52.381 18.84 7.15 45.94 2.17
4763 4916 0.242017 GAGCTGGCTGCAAATTCGTT 59.758 50.000 18.84 0.00 45.94 3.85
4822 4984 4.220163 TGTGCTATCCATGAAATGCAACAA 59.780 37.500 0.00 0.00 44.97 2.83
4839 5001 5.748152 TGCAACAAAGCTTAATGAAAGACAC 59.252 36.000 0.00 0.00 37.38 3.67
4841 5003 6.476706 GCAACAAAGCTTAATGAAAGACACTT 59.523 34.615 0.00 0.00 37.38 3.16
5007 5169 6.312141 TGTGGAGTATGATGGAAAGATTCA 57.688 37.500 0.00 0.00 0.00 2.57
5080 5242 3.465742 TGCTGATATGAAGTCCTGCTC 57.534 47.619 0.00 0.00 0.00 4.26
5233 5396 1.023513 GCTGCCTGTAAGTGCCTCTG 61.024 60.000 0.00 0.00 30.41 3.35
5294 5457 8.882736 CCAAGCATTTCCTCAAAAATATTAACC 58.117 33.333 0.00 0.00 0.00 2.85
5361 5524 2.348620 CTAGCTGCACAGGCCACA 59.651 61.111 5.01 0.00 40.13 4.17
5362 5525 1.302752 CTAGCTGCACAGGCCACAA 60.303 57.895 5.01 0.00 40.13 3.33
5370 5533 1.915141 CACAGGCCACAAAGGAGAAT 58.085 50.000 5.01 0.00 41.22 2.40
5847 6010 6.183360 GGTTGAGTGTAACGAGTGTAATAAGC 60.183 42.308 0.00 0.00 45.86 3.09
5932 6095 8.899765 TGGGATCCTTGACCATATATGAAAATA 58.100 33.333 14.54 0.00 0.00 1.40
5954 6117 9.768662 AAATAAATGCAAATTAGCTAATGGAGG 57.231 29.630 19.53 10.34 34.99 4.30
5955 6118 5.796424 AATGCAAATTAGCTAATGGAGGG 57.204 39.130 19.53 8.75 34.99 4.30
5956 6119 4.249638 TGCAAATTAGCTAATGGAGGGT 57.750 40.909 19.53 0.00 34.99 4.34
5957 6120 3.953612 TGCAAATTAGCTAATGGAGGGTG 59.046 43.478 19.53 11.45 34.99 4.61
5958 6121 3.243535 GCAAATTAGCTAATGGAGGGTGC 60.244 47.826 19.53 16.30 0.00 5.01
5959 6122 3.951563 AATTAGCTAATGGAGGGTGCA 57.048 42.857 19.53 0.00 0.00 4.57
5960 6123 3.951563 ATTAGCTAATGGAGGGTGCAA 57.048 42.857 18.20 0.00 0.00 4.08
5961 6124 3.730215 TTAGCTAATGGAGGGTGCAAA 57.270 42.857 0.86 0.00 0.00 3.68
5962 6125 2.603075 AGCTAATGGAGGGTGCAAAA 57.397 45.000 0.00 0.00 0.00 2.44
5963 6126 2.450476 AGCTAATGGAGGGTGCAAAAG 58.550 47.619 0.00 0.00 0.00 2.27
5964 6127 2.171003 GCTAATGGAGGGTGCAAAAGT 58.829 47.619 0.00 0.00 0.00 2.66
5965 6128 2.562738 GCTAATGGAGGGTGCAAAAGTT 59.437 45.455 0.00 0.00 0.00 2.66
5966 6129 3.006859 GCTAATGGAGGGTGCAAAAGTTT 59.993 43.478 0.00 0.00 0.00 2.66
5967 6130 3.751479 AATGGAGGGTGCAAAAGTTTC 57.249 42.857 0.00 0.00 0.00 2.78
5968 6131 2.151502 TGGAGGGTGCAAAAGTTTCA 57.848 45.000 0.00 0.00 0.00 2.69
5969 6132 2.461695 TGGAGGGTGCAAAAGTTTCAA 58.538 42.857 0.00 0.00 0.00 2.69
5970 6133 3.037549 TGGAGGGTGCAAAAGTTTCAAT 58.962 40.909 0.00 0.00 0.00 2.57
5971 6134 3.069443 TGGAGGGTGCAAAAGTTTCAATC 59.931 43.478 0.00 0.00 0.00 2.67
5972 6135 3.308530 GAGGGTGCAAAAGTTTCAATCG 58.691 45.455 0.00 0.00 0.00 3.34
5973 6136 2.955660 AGGGTGCAAAAGTTTCAATCGA 59.044 40.909 0.00 0.00 0.00 3.59
5974 6137 3.383185 AGGGTGCAAAAGTTTCAATCGAA 59.617 39.130 0.00 0.00 0.00 3.71
5975 6138 4.039124 AGGGTGCAAAAGTTTCAATCGAAT 59.961 37.500 0.00 0.00 0.00 3.34
5976 6139 4.150451 GGGTGCAAAAGTTTCAATCGAATG 59.850 41.667 0.00 0.00 0.00 2.67
5977 6140 4.150451 GGTGCAAAAGTTTCAATCGAATGG 59.850 41.667 0.00 0.00 0.00 3.16
5978 6141 4.150451 GTGCAAAAGTTTCAATCGAATGGG 59.850 41.667 0.00 0.00 0.00 4.00
5979 6142 3.679502 GCAAAAGTTTCAATCGAATGGGG 59.320 43.478 0.00 0.00 0.00 4.96
5980 6143 4.560513 GCAAAAGTTTCAATCGAATGGGGA 60.561 41.667 0.00 0.00 0.00 4.81
5981 6144 5.537188 CAAAAGTTTCAATCGAATGGGGAA 58.463 37.500 0.00 0.00 0.00 3.97
5982 6145 5.799827 AAAGTTTCAATCGAATGGGGAAA 57.200 34.783 0.00 0.00 0.00 3.13
5983 6146 4.783764 AGTTTCAATCGAATGGGGAAAC 57.216 40.909 16.31 16.31 44.60 2.78
5984 6147 4.148838 AGTTTCAATCGAATGGGGAAACA 58.851 39.130 21.62 0.00 45.90 2.83
5985 6148 4.772100 AGTTTCAATCGAATGGGGAAACAT 59.228 37.500 21.62 11.40 45.90 2.71
5986 6149 5.245977 AGTTTCAATCGAATGGGGAAACATT 59.754 36.000 21.62 0.00 45.90 2.71
5987 6150 5.736951 TTCAATCGAATGGGGAAACATTT 57.263 34.783 0.00 0.00 40.92 2.32
5988 6151 6.842437 TTCAATCGAATGGGGAAACATTTA 57.158 33.333 0.00 0.00 40.92 1.40
5989 6152 7.416964 TTCAATCGAATGGGGAAACATTTAT 57.583 32.000 0.00 0.00 40.92 1.40
5990 6153 8.526667 TTCAATCGAATGGGGAAACATTTATA 57.473 30.769 0.00 0.00 40.92 0.98
5991 6154 8.526667 TCAATCGAATGGGGAAACATTTATAA 57.473 30.769 0.00 0.00 40.92 0.98
5992 6155 9.142014 TCAATCGAATGGGGAAACATTTATAAT 57.858 29.630 0.00 0.00 40.92 1.28
6000 6163 9.990868 ATGGGGAAACATTTATAATATACTCCC 57.009 33.333 11.45 11.45 38.46 4.30
6001 6164 9.189750 TGGGGAAACATTTATAATATACTCCCT 57.810 33.333 16.27 0.00 39.06 4.20
6002 6165 9.682465 GGGGAAACATTTATAATATACTCCCTC 57.318 37.037 16.27 7.92 39.06 4.30
6003 6166 9.682465 GGGAAACATTTATAATATACTCCCTCC 57.318 37.037 12.18 0.00 36.61 4.30
6004 6167 9.379791 GGAAACATTTATAATATACTCCCTCCG 57.620 37.037 0.00 0.00 0.00 4.63
6005 6168 9.939802 GAAACATTTATAATATACTCCCTCCGT 57.060 33.333 0.00 0.00 0.00 4.69
6007 6170 9.939802 AACATTTATAATATACTCCCTCCGTTC 57.060 33.333 0.00 0.00 0.00 3.95
6008 6171 8.537858 ACATTTATAATATACTCCCTCCGTTCC 58.462 37.037 0.00 0.00 0.00 3.62
6009 6172 8.759782 CATTTATAATATACTCCCTCCGTTCCT 58.240 37.037 0.00 0.00 0.00 3.36
6011 6174 9.827198 TTTATAATATACTCCCTCCGTTCCTAA 57.173 33.333 0.00 0.00 0.00 2.69
6012 6175 9.827198 TTATAATATACTCCCTCCGTTCCTAAA 57.173 33.333 0.00 0.00 0.00 1.85
6013 6176 8.912614 ATAATATACTCCCTCCGTTCCTAAAT 57.087 34.615 0.00 0.00 0.00 1.40
6015 6178 8.912614 AATATACTCCCTCCGTTCCTAAATAT 57.087 34.615 0.00 0.00 0.00 1.28
6016 6179 4.957684 ACTCCCTCCGTTCCTAAATATG 57.042 45.455 0.00 0.00 0.00 1.78
6017 6180 4.296056 ACTCCCTCCGTTCCTAAATATGT 58.704 43.478 0.00 0.00 0.00 2.29
6018 6181 4.344390 ACTCCCTCCGTTCCTAAATATGTC 59.656 45.833 0.00 0.00 0.00 3.06
6019 6182 4.553678 TCCCTCCGTTCCTAAATATGTCT 58.446 43.478 0.00 0.00 0.00 3.41
6020 6183 5.708544 TCCCTCCGTTCCTAAATATGTCTA 58.291 41.667 0.00 0.00 0.00 2.59
6021 6184 6.320518 TCCCTCCGTTCCTAAATATGTCTAT 58.679 40.000 0.00 0.00 0.00 1.98
6022 6185 6.785963 TCCCTCCGTTCCTAAATATGTCTATT 59.214 38.462 0.00 0.00 0.00 1.73
6023 6186 7.951806 TCCCTCCGTTCCTAAATATGTCTATTA 59.048 37.037 0.00 0.00 0.00 0.98
6024 6187 8.251721 CCCTCCGTTCCTAAATATGTCTATTAG 58.748 40.741 0.00 0.00 0.00 1.73
6025 6188 9.021807 CCTCCGTTCCTAAATATGTCTATTAGA 57.978 37.037 0.00 0.00 0.00 2.10
6027 6190 9.803507 TCCGTTCCTAAATATGTCTATTAGAGA 57.196 33.333 0.00 0.00 0.00 3.10
6074 6237 9.466497 AGCACCTTTTAGAGATTTCAATATGAA 57.534 29.630 0.00 0.00 34.03 2.57
6075 6238 9.508567 GCACCTTTTAGAGATTTCAATATGAAC 57.491 33.333 0.00 0.00 35.89 3.18
6132 6295 8.766000 TCTAAAATATGTGTACATGTGTTCGT 57.234 30.769 9.11 2.56 37.15 3.85
6133 6296 9.857957 TCTAAAATATGTGTACATGTGTTCGTA 57.142 29.630 9.11 4.70 37.15 3.43
6136 6299 8.487313 AAATATGTGTACATGTGTTCGTATGT 57.513 30.769 9.11 2.46 40.39 2.29
6137 6300 9.589111 AAATATGTGTACATGTGTTCGTATGTA 57.411 29.630 9.11 0.00 38.41 2.29
6138 6301 8.797266 ATATGTGTACATGTGTTCGTATGTAG 57.203 34.615 9.11 0.00 39.63 2.74
6139 6302 6.016213 TGTGTACATGTGTTCGTATGTAGT 57.984 37.500 9.11 0.00 39.63 2.73
6140 6303 6.448852 TGTGTACATGTGTTCGTATGTAGTT 58.551 36.000 9.11 0.00 39.63 2.24
6141 6304 6.924612 TGTGTACATGTGTTCGTATGTAGTTT 59.075 34.615 9.11 0.00 39.63 2.66
6142 6305 7.095982 TGTGTACATGTGTTCGTATGTAGTTTG 60.096 37.037 9.11 0.00 39.63 2.93
6143 6306 6.924612 TGTACATGTGTTCGTATGTAGTTTGT 59.075 34.615 9.11 0.00 39.63 2.83
6144 6307 8.081025 TGTACATGTGTTCGTATGTAGTTTGTA 58.919 33.333 9.11 0.00 39.63 2.41
6145 6308 9.079833 GTACATGTGTTCGTATGTAGTTTGTAT 57.920 33.333 9.11 0.00 39.63 2.29
6146 6309 8.542497 ACATGTGTTCGTATGTAGTTTGTATT 57.458 30.769 0.00 0.00 35.86 1.89
6147 6310 9.642327 ACATGTGTTCGTATGTAGTTTGTATTA 57.358 29.630 0.00 0.00 35.86 0.98
6197 6360 9.515226 AAAAATATACCTGTGTCTGTATTGTGT 57.485 29.630 0.00 0.00 0.00 3.72
6198 6361 9.515226 AAAATATACCTGTGTCTGTATTGTGTT 57.485 29.630 0.00 0.00 0.00 3.32
6202 6365 8.911918 ATACCTGTGTCTGTATTGTGTTAAAA 57.088 30.769 0.00 0.00 0.00 1.52
6203 6366 7.259290 ACCTGTGTCTGTATTGTGTTAAAAG 57.741 36.000 0.00 0.00 0.00 2.27
6204 6367 7.051623 ACCTGTGTCTGTATTGTGTTAAAAGA 58.948 34.615 0.00 0.00 0.00 2.52
6205 6368 7.554835 ACCTGTGTCTGTATTGTGTTAAAAGAA 59.445 33.333 0.00 0.00 0.00 2.52
6206 6369 8.402472 CCTGTGTCTGTATTGTGTTAAAAGAAA 58.598 33.333 0.00 0.00 0.00 2.52
6207 6370 9.781834 CTGTGTCTGTATTGTGTTAAAAGAAAA 57.218 29.630 0.00 0.00 0.00 2.29
6274 6437 9.911788 AAATGGAGAAATTCATATGTAGTCTGT 57.088 29.630 1.90 0.00 0.00 3.41
6278 6441 9.347934 GGAGAAATTCATATGTAGTCTGTATCG 57.652 37.037 1.90 0.00 0.00 2.92
6279 6442 9.900710 GAGAAATTCATATGTAGTCTGTATCGT 57.099 33.333 1.90 0.00 0.00 3.73
6286 6449 9.945904 TCATATGTAGTCTGTATCGTAATCTCT 57.054 33.333 1.90 0.00 0.00 3.10
6329 6492 9.753674 AAAAATGAAGGGAGTAGATTATGTCAA 57.246 29.630 0.00 0.00 0.00 3.18
6330 6493 9.753674 AAAATGAAGGGAGTAGATTATGTCAAA 57.246 29.630 0.00 0.00 0.00 2.69
6331 6494 9.753674 AAATGAAGGGAGTAGATTATGTCAAAA 57.246 29.630 0.00 0.00 0.00 2.44
6332 6495 8.970859 ATGAAGGGAGTAGATTATGTCAAAAG 57.029 34.615 0.00 0.00 0.00 2.27
6333 6496 8.146053 TGAAGGGAGTAGATTATGTCAAAAGA 57.854 34.615 0.00 0.00 0.00 2.52
6334 6497 8.602424 TGAAGGGAGTAGATTATGTCAAAAGAA 58.398 33.333 0.00 0.00 0.00 2.52
6335 6498 9.449719 GAAGGGAGTAGATTATGTCAAAAGAAA 57.550 33.333 0.00 0.00 0.00 2.52
6336 6499 9.454859 AAGGGAGTAGATTATGTCAAAAGAAAG 57.545 33.333 0.00 0.00 0.00 2.62
6337 6500 8.826765 AGGGAGTAGATTATGTCAAAAGAAAGA 58.173 33.333 0.00 0.00 0.00 2.52
6338 6501 8.884726 GGGAGTAGATTATGTCAAAAGAAAGAC 58.115 37.037 0.00 0.00 35.37 3.01
6339 6502 9.660180 GGAGTAGATTATGTCAAAAGAAAGACT 57.340 33.333 0.00 0.00 35.81 3.24
6344 6507 9.965902 AGATTATGTCAAAAGAAAGACTACCAT 57.034 29.630 0.00 0.00 35.81 3.55
6348 6511 7.038154 TGTCAAAAGAAAGACTACCATTTGG 57.962 36.000 0.00 0.00 37.14 3.28
6349 6512 6.605594 TGTCAAAAGAAAGACTACCATTTGGT 59.394 34.615 7.51 7.51 40.98 3.67
6350 6513 7.123547 TGTCAAAAGAAAGACTACCATTTGGTT 59.876 33.333 7.69 0.00 39.33 3.67
6381 6544 5.751243 AAAGCATTTTATCGCCGTCTAAT 57.249 34.783 0.00 0.00 31.62 1.73
6382 6545 5.751243 AAGCATTTTATCGCCGTCTAATT 57.249 34.783 0.00 0.00 0.00 1.40
6383 6546 5.751243 AGCATTTTATCGCCGTCTAATTT 57.249 34.783 0.00 0.00 0.00 1.82
6384 6547 5.748592 AGCATTTTATCGCCGTCTAATTTC 58.251 37.500 0.00 0.00 0.00 2.17
6385 6548 5.295787 AGCATTTTATCGCCGTCTAATTTCA 59.704 36.000 0.00 0.00 0.00 2.69
6386 6549 5.621228 GCATTTTATCGCCGTCTAATTTCAG 59.379 40.000 0.00 0.00 0.00 3.02
6387 6550 6.511121 GCATTTTATCGCCGTCTAATTTCAGA 60.511 38.462 0.00 0.00 0.00 3.27
6388 6551 6.583912 TTTTATCGCCGTCTAATTTCAGAG 57.416 37.500 0.00 0.00 0.00 3.35
6389 6552 5.509716 TTATCGCCGTCTAATTTCAGAGA 57.490 39.130 0.00 0.00 0.00 3.10
6390 6553 3.146618 TCGCCGTCTAATTTCAGAGAC 57.853 47.619 0.00 0.00 38.99 3.36
6391 6554 2.490509 TCGCCGTCTAATTTCAGAGACA 59.509 45.455 6.85 0.00 41.87 3.41
6392 6555 2.599082 CGCCGTCTAATTTCAGAGACAC 59.401 50.000 6.85 0.00 41.87 3.67
6393 6556 3.585862 GCCGTCTAATTTCAGAGACACA 58.414 45.455 6.85 0.00 41.87 3.72
6394 6557 4.184629 GCCGTCTAATTTCAGAGACACAT 58.815 43.478 6.85 0.00 41.87 3.21
6395 6558 5.348986 GCCGTCTAATTTCAGAGACACATA 58.651 41.667 6.85 0.00 41.87 2.29
6396 6559 5.232414 GCCGTCTAATTTCAGAGACACATAC 59.768 44.000 6.85 0.00 41.87 2.39
6397 6560 6.330278 CCGTCTAATTTCAGAGACACATACA 58.670 40.000 6.85 0.00 41.87 2.29
6398 6561 6.980978 CCGTCTAATTTCAGAGACACATACAT 59.019 38.462 6.85 0.00 41.87 2.29
6399 6562 7.043125 CCGTCTAATTTCAGAGACACATACATG 60.043 40.741 6.85 0.00 41.87 3.21
6400 6563 7.489435 CGTCTAATTTCAGAGACACATACATGT 59.511 37.037 2.69 2.69 41.87 3.21
6401 6564 9.155975 GTCTAATTTCAGAGACACATACATGTT 57.844 33.333 2.30 0.00 41.49 2.71
6402 6565 9.725019 TCTAATTTCAGAGACACATACATGTTT 57.275 29.630 2.30 0.00 39.39 2.83
6408 6571 8.846943 TCAGAGACACATACATGTTTTATTGT 57.153 30.769 2.30 0.62 39.39 2.71
6409 6572 9.283768 TCAGAGACACATACATGTTTTATTGTT 57.716 29.630 2.30 0.00 39.39 2.83
6410 6573 9.897744 CAGAGACACATACATGTTTTATTGTTT 57.102 29.630 2.30 0.00 39.39 2.83
6473 6636 3.990959 AGAGACCTAGGGAGCTTTTTG 57.009 47.619 14.81 0.00 0.00 2.44
6474 6637 2.026729 AGAGACCTAGGGAGCTTTTTGC 60.027 50.000 14.81 0.00 43.29 3.68
6475 6638 1.004862 AGACCTAGGGAGCTTTTTGCC 59.995 52.381 14.81 0.00 44.23 4.52
6476 6639 0.777446 ACCTAGGGAGCTTTTTGCCA 59.223 50.000 14.81 0.00 44.23 4.92
6477 6640 1.146982 ACCTAGGGAGCTTTTTGCCAA 59.853 47.619 14.81 0.00 44.23 4.52
6478 6641 2.247358 CCTAGGGAGCTTTTTGCCAAA 58.753 47.619 0.00 0.00 44.23 3.28
6479 6642 2.029020 CCTAGGGAGCTTTTTGCCAAAC 60.029 50.000 0.00 0.00 44.23 2.93
6480 6643 0.758734 AGGGAGCTTTTTGCCAAACC 59.241 50.000 0.00 0.00 44.23 3.27
6481 6644 0.250295 GGGAGCTTTTTGCCAAACCC 60.250 55.000 0.00 0.00 44.23 4.11
6482 6645 0.758734 GGAGCTTTTTGCCAAACCCT 59.241 50.000 0.00 0.00 44.23 4.34
6483 6646 1.140852 GGAGCTTTTTGCCAAACCCTT 59.859 47.619 0.00 0.00 44.23 3.95
6484 6647 2.483876 GAGCTTTTTGCCAAACCCTTC 58.516 47.619 0.00 0.00 44.23 3.46
6485 6648 1.836802 AGCTTTTTGCCAAACCCTTCA 59.163 42.857 0.00 0.00 44.23 3.02
6486 6649 1.939934 GCTTTTTGCCAAACCCTTCAC 59.060 47.619 0.00 0.00 35.15 3.18
6487 6650 2.200899 CTTTTTGCCAAACCCTTCACG 58.799 47.619 0.00 0.00 0.00 4.35
6488 6651 1.475403 TTTTGCCAAACCCTTCACGA 58.525 45.000 0.00 0.00 0.00 4.35
6489 6652 0.741915 TTTGCCAAACCCTTCACGAC 59.258 50.000 0.00 0.00 0.00 4.34
6490 6653 0.394488 TTGCCAAACCCTTCACGACA 60.394 50.000 0.00 0.00 0.00 4.35
6491 6654 0.179004 TGCCAAACCCTTCACGACAT 60.179 50.000 0.00 0.00 0.00 3.06
6492 6655 0.521735 GCCAAACCCTTCACGACATC 59.478 55.000 0.00 0.00 0.00 3.06
6493 6656 1.882352 GCCAAACCCTTCACGACATCT 60.882 52.381 0.00 0.00 0.00 2.90
6494 6657 1.806542 CCAAACCCTTCACGACATCTG 59.193 52.381 0.00 0.00 0.00 2.90
6495 6658 2.494059 CAAACCCTTCACGACATCTGT 58.506 47.619 0.00 0.00 0.00 3.41
6496 6659 2.169832 AACCCTTCACGACATCTGTG 57.830 50.000 0.00 0.00 38.70 3.66
6497 6660 1.338107 ACCCTTCACGACATCTGTGA 58.662 50.000 0.00 0.00 44.17 3.58
6498 6661 1.000955 ACCCTTCACGACATCTGTGAC 59.999 52.381 0.00 0.00 45.42 3.67
6499 6662 1.273606 CCCTTCACGACATCTGTGACT 59.726 52.381 0.00 0.00 45.42 3.41
6500 6663 2.332104 CCTTCACGACATCTGTGACTG 58.668 52.381 0.00 0.00 45.42 3.51
6501 6664 2.288457 CCTTCACGACATCTGTGACTGT 60.288 50.000 0.00 0.00 45.42 3.55
6502 6665 2.422276 TCACGACATCTGTGACTGTG 57.578 50.000 0.00 0.00 41.20 3.66
6503 6666 1.681264 TCACGACATCTGTGACTGTGT 59.319 47.619 0.00 0.00 41.20 3.72
6504 6667 1.788886 CACGACATCTGTGACTGTGTG 59.211 52.381 0.00 1.00 39.73 3.82
6505 6668 1.269778 ACGACATCTGTGACTGTGTGG 60.270 52.381 0.00 4.82 0.00 4.17
6506 6669 1.800805 GACATCTGTGACTGTGTGGG 58.199 55.000 0.00 0.00 0.00 4.61
6507 6670 1.070758 GACATCTGTGACTGTGTGGGT 59.929 52.381 0.00 0.00 0.00 4.51
6508 6671 1.070758 ACATCTGTGACTGTGTGGGTC 59.929 52.381 0.00 0.00 0.00 4.46
6509 6672 0.318441 ATCTGTGACTGTGTGGGTCG 59.682 55.000 0.00 0.00 36.58 4.79
6510 6673 1.956170 CTGTGACTGTGTGGGTCGC 60.956 63.158 0.00 0.00 42.45 5.19
6511 6674 2.369257 CTGTGACTGTGTGGGTCGCT 62.369 60.000 8.48 0.00 42.54 4.93
6512 6675 1.110518 TGTGACTGTGTGGGTCGCTA 61.111 55.000 8.48 0.00 42.54 4.26
6513 6676 0.388649 GTGACTGTGTGGGTCGCTAG 60.389 60.000 0.00 0.00 39.99 3.42
6514 6677 1.215647 GACTGTGTGGGTCGCTAGG 59.784 63.158 0.00 0.00 0.00 3.02
6515 6678 2.227089 GACTGTGTGGGTCGCTAGGG 62.227 65.000 0.00 0.00 0.00 3.53
6516 6679 3.665675 CTGTGTGGGTCGCTAGGGC 62.666 68.421 1.02 0.00 0.00 5.19
6517 6680 3.391382 GTGTGGGTCGCTAGGGCT 61.391 66.667 1.02 0.00 36.09 5.19
6518 6681 3.075005 TGTGGGTCGCTAGGGCTC 61.075 66.667 1.02 0.00 36.09 4.70
6519 6682 3.851128 GTGGGTCGCTAGGGCTCC 61.851 72.222 1.02 7.06 36.09 4.70
6520 6683 4.075793 TGGGTCGCTAGGGCTCCT 62.076 66.667 16.00 0.00 37.71 3.69
6521 6684 2.764547 GGGTCGCTAGGGCTCCTT 60.765 66.667 16.00 0.00 34.61 3.36
6522 6685 2.501610 GGTCGCTAGGGCTCCTTG 59.498 66.667 1.02 0.00 34.61 3.61
6523 6686 2.202946 GTCGCTAGGGCTCCTTGC 60.203 66.667 14.51 14.51 46.03 4.01
6541 6704 3.911719 CCTTTCTGGCTTAGGGCAT 57.088 52.632 0.31 0.00 46.81 4.40
6542 6705 2.149973 CCTTTCTGGCTTAGGGCATT 57.850 50.000 0.31 0.00 46.81 3.56
6543 6706 2.460669 CCTTTCTGGCTTAGGGCATTT 58.539 47.619 0.31 0.00 46.81 2.32
6544 6707 2.833943 CCTTTCTGGCTTAGGGCATTTT 59.166 45.455 0.31 0.00 46.81 1.82
6545 6708 3.118992 CCTTTCTGGCTTAGGGCATTTTC 60.119 47.826 0.31 0.00 46.81 2.29
6546 6709 2.897271 TCTGGCTTAGGGCATTTTCA 57.103 45.000 0.31 0.00 46.81 2.69
6547 6710 3.168035 TCTGGCTTAGGGCATTTTCAA 57.832 42.857 0.31 0.00 46.81 2.69
6548 6711 2.825532 TCTGGCTTAGGGCATTTTCAAC 59.174 45.455 0.31 0.00 46.81 3.18
6549 6712 2.562298 CTGGCTTAGGGCATTTTCAACA 59.438 45.455 0.31 0.00 46.81 3.33
6550 6713 2.562298 TGGCTTAGGGCATTTTCAACAG 59.438 45.455 0.00 0.00 43.20 3.16
6551 6714 2.562738 GGCTTAGGGCATTTTCAACAGT 59.437 45.455 0.00 0.00 44.01 3.55
6552 6715 3.761752 GGCTTAGGGCATTTTCAACAGTA 59.238 43.478 0.00 0.00 44.01 2.74
6553 6716 4.142381 GGCTTAGGGCATTTTCAACAGTAG 60.142 45.833 0.00 0.00 44.01 2.57
6554 6717 4.675408 GCTTAGGGCATTTTCAACAGTAGC 60.675 45.833 0.00 0.00 41.35 3.58
6555 6718 2.171003 AGGGCATTTTCAACAGTAGCC 58.829 47.619 0.00 0.00 39.86 3.93
6556 6719 2.654749 GGCATTTTCAACAGTAGCCC 57.345 50.000 0.00 0.00 34.71 5.19
6557 6720 2.171003 GGCATTTTCAACAGTAGCCCT 58.829 47.619 0.00 0.00 34.71 5.19
6558 6721 3.352648 GGCATTTTCAACAGTAGCCCTA 58.647 45.455 0.00 0.00 34.71 3.53
6559 6722 3.954258 GGCATTTTCAACAGTAGCCCTAT 59.046 43.478 0.00 0.00 34.71 2.57
6560 6723 5.130350 GGCATTTTCAACAGTAGCCCTATA 58.870 41.667 0.00 0.00 34.71 1.31
6561 6724 5.770162 GGCATTTTCAACAGTAGCCCTATAT 59.230 40.000 0.00 0.00 34.71 0.86
6562 6725 6.265422 GGCATTTTCAACAGTAGCCCTATATT 59.735 38.462 0.00 0.00 34.71 1.28
6563 6726 7.141363 GCATTTTCAACAGTAGCCCTATATTG 58.859 38.462 0.00 0.00 0.00 1.90
6564 6727 7.651808 CATTTTCAACAGTAGCCCTATATTGG 58.348 38.462 0.00 0.00 0.00 3.16
6565 6728 6.569127 TTTCAACAGTAGCCCTATATTGGA 57.431 37.500 4.60 0.00 0.00 3.53
6566 6729 5.546621 TCAACAGTAGCCCTATATTGGAC 57.453 43.478 4.60 0.00 0.00 4.02
6567 6730 4.966168 TCAACAGTAGCCCTATATTGGACA 59.034 41.667 4.60 0.00 0.00 4.02
6568 6731 4.957684 ACAGTAGCCCTATATTGGACAC 57.042 45.455 4.60 0.08 0.00 3.67
6569 6732 4.295201 ACAGTAGCCCTATATTGGACACA 58.705 43.478 4.60 0.00 0.00 3.72
6570 6733 4.101119 ACAGTAGCCCTATATTGGACACAC 59.899 45.833 4.60 0.00 0.00 3.82
6571 6734 4.100963 CAGTAGCCCTATATTGGACACACA 59.899 45.833 4.60 0.00 0.00 3.72
6572 6735 4.719773 AGTAGCCCTATATTGGACACACAA 59.280 41.667 4.60 0.00 34.41 3.33
6573 6736 4.584638 AGCCCTATATTGGACACACAAA 57.415 40.909 4.60 0.00 33.48 2.83
6574 6737 4.929479 AGCCCTATATTGGACACACAAAA 58.071 39.130 4.60 0.00 33.48 2.44
6575 6738 4.949856 AGCCCTATATTGGACACACAAAAG 59.050 41.667 4.60 0.00 33.48 2.27
6576 6739 4.705023 GCCCTATATTGGACACACAAAAGT 59.295 41.667 4.60 0.00 33.48 2.66
6577 6740 5.883673 GCCCTATATTGGACACACAAAAGTA 59.116 40.000 4.60 0.00 33.48 2.24
6578 6741 6.038271 GCCCTATATTGGACACACAAAAGTAG 59.962 42.308 4.60 0.00 33.48 2.57
6579 6742 7.110155 CCCTATATTGGACACACAAAAGTAGT 58.890 38.462 4.60 0.00 33.48 2.73
6580 6743 7.610305 CCCTATATTGGACACACAAAAGTAGTT 59.390 37.037 4.60 0.00 33.48 2.24
6581 6744 8.665685 CCTATATTGGACACACAAAAGTAGTTC 58.334 37.037 0.00 0.00 33.48 3.01
6582 6745 5.767816 ATTGGACACACAAAAGTAGTTCC 57.232 39.130 0.00 0.00 33.48 3.62
6583 6746 4.497291 TGGACACACAAAAGTAGTTCCT 57.503 40.909 0.00 0.00 0.00 3.36
6584 6747 4.448210 TGGACACACAAAAGTAGTTCCTC 58.552 43.478 0.00 0.00 0.00 3.71
6585 6748 3.813724 GGACACACAAAAGTAGTTCCTCC 59.186 47.826 0.00 0.00 0.00 4.30
6586 6749 3.463944 ACACACAAAAGTAGTTCCTCCG 58.536 45.455 0.00 0.00 0.00 4.63
6587 6750 3.118519 ACACACAAAAGTAGTTCCTCCGT 60.119 43.478 0.00 0.00 0.00 4.69
6588 6751 3.875134 CACACAAAAGTAGTTCCTCCGTT 59.125 43.478 0.00 0.00 0.00 4.44
6589 6752 4.025145 CACACAAAAGTAGTTCCTCCGTTC 60.025 45.833 0.00 0.00 0.00 3.95
6590 6753 3.183775 CACAAAAGTAGTTCCTCCGTTCG 59.816 47.826 0.00 0.00 0.00 3.95
6591 6754 3.068590 ACAAAAGTAGTTCCTCCGTTCGA 59.931 43.478 0.00 0.00 0.00 3.71
6592 6755 4.053295 CAAAAGTAGTTCCTCCGTTCGAA 58.947 43.478 0.00 0.00 0.00 3.71
6593 6756 4.326504 AAAGTAGTTCCTCCGTTCGAAA 57.673 40.909 0.00 0.00 0.00 3.46
6594 6757 4.532314 AAGTAGTTCCTCCGTTCGAAAT 57.468 40.909 0.00 0.00 0.00 2.17
6595 6758 4.532314 AGTAGTTCCTCCGTTCGAAATT 57.468 40.909 0.00 0.00 0.00 1.82
6596 6759 5.649782 AGTAGTTCCTCCGTTCGAAATTA 57.350 39.130 0.00 0.00 0.00 1.40
6597 6760 5.405797 AGTAGTTCCTCCGTTCGAAATTAC 58.594 41.667 0.00 0.00 0.00 1.89
6598 6761 4.532314 AGTTCCTCCGTTCGAAATTACT 57.468 40.909 0.00 0.00 0.00 2.24
6599 6762 4.891260 AGTTCCTCCGTTCGAAATTACTT 58.109 39.130 0.00 0.00 0.00 2.24
6600 6763 4.689345 AGTTCCTCCGTTCGAAATTACTTG 59.311 41.667 0.00 0.00 0.00 3.16
6601 6764 4.261578 TCCTCCGTTCGAAATTACTTGT 57.738 40.909 0.00 0.00 0.00 3.16
6602 6765 4.240096 TCCTCCGTTCGAAATTACTTGTC 58.760 43.478 0.00 0.00 0.00 3.18
6603 6766 4.021719 TCCTCCGTTCGAAATTACTTGTCT 60.022 41.667 0.00 0.00 0.00 3.41
6604 6767 4.326548 CCTCCGTTCGAAATTACTTGTCTC 59.673 45.833 0.00 0.00 0.00 3.36
6605 6768 3.916172 TCCGTTCGAAATTACTTGTCTCG 59.084 43.478 0.00 0.00 0.00 4.04
6606 6769 3.060363 CCGTTCGAAATTACTTGTCTCGG 59.940 47.826 0.00 0.00 0.00 4.63
6607 6770 3.916172 CGTTCGAAATTACTTGTCTCGGA 59.084 43.478 0.00 0.00 0.00 4.55
6608 6771 4.383649 CGTTCGAAATTACTTGTCTCGGAA 59.616 41.667 0.00 0.00 0.00 4.30
6609 6772 5.107760 CGTTCGAAATTACTTGTCTCGGAAA 60.108 40.000 0.00 0.00 0.00 3.13
6610 6773 6.400727 CGTTCGAAATTACTTGTCTCGGAAAT 60.401 38.462 0.00 0.00 0.00 2.17
6611 6774 6.403333 TCGAAATTACTTGTCTCGGAAATG 57.597 37.500 0.00 0.00 0.00 2.32
6612 6775 6.160684 TCGAAATTACTTGTCTCGGAAATGA 58.839 36.000 0.00 0.00 0.00 2.57
6613 6776 6.647481 TCGAAATTACTTGTCTCGGAAATGAA 59.353 34.615 0.00 0.00 0.00 2.57
6614 6777 7.333423 TCGAAATTACTTGTCTCGGAAATGAAT 59.667 33.333 0.00 0.00 0.00 2.57
6615 6778 7.426456 CGAAATTACTTGTCTCGGAAATGAATG 59.574 37.037 0.00 0.00 0.00 2.67
6616 6779 7.687941 AATTACTTGTCTCGGAAATGAATGT 57.312 32.000 0.00 0.00 0.00 2.71
6617 6780 8.786826 AATTACTTGTCTCGGAAATGAATGTA 57.213 30.769 0.00 0.00 0.00 2.29
6618 6781 8.964476 ATTACTTGTCTCGGAAATGAATGTAT 57.036 30.769 0.00 0.00 0.00 2.29
6619 6782 6.910536 ACTTGTCTCGGAAATGAATGTATC 57.089 37.500 0.00 0.00 0.00 2.24
6620 6783 6.644347 ACTTGTCTCGGAAATGAATGTATCT 58.356 36.000 0.00 0.00 0.00 1.98
6621 6784 7.782049 ACTTGTCTCGGAAATGAATGTATCTA 58.218 34.615 0.00 0.00 0.00 1.98
6622 6785 8.258007 ACTTGTCTCGGAAATGAATGTATCTAA 58.742 33.333 0.00 0.00 0.00 2.10
6623 6786 9.098355 CTTGTCTCGGAAATGAATGTATCTAAA 57.902 33.333 0.00 0.00 0.00 1.85
6624 6787 9.443323 TTGTCTCGGAAATGAATGTATCTAAAA 57.557 29.630 0.00 0.00 0.00 1.52
6625 6788 8.879759 TGTCTCGGAAATGAATGTATCTAAAAC 58.120 33.333 0.00 0.00 0.00 2.43
6626 6789 9.099454 GTCTCGGAAATGAATGTATCTAAAACT 57.901 33.333 0.00 0.00 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.382254 CCGAGTATTTGTAGCTACAACCCA 60.382 45.833 33.52 22.14 45.01 4.51
1 2 4.117685 CCGAGTATTTGTAGCTACAACCC 58.882 47.826 33.52 23.80 45.01 4.11
2 3 5.002464 TCCGAGTATTTGTAGCTACAACC 57.998 43.478 33.52 24.09 45.01 3.77
3 4 8.813643 ATAATCCGAGTATTTGTAGCTACAAC 57.186 34.615 33.52 24.50 45.01 3.32
5 6 9.511272 TCTATAATCCGAGTATTTGTAGCTACA 57.489 33.333 22.67 22.67 0.00 2.74
6 7 9.771915 GTCTATAATCCGAGTATTTGTAGCTAC 57.228 37.037 17.30 17.30 0.00 3.58
7 8 8.954350 GGTCTATAATCCGAGTATTTGTAGCTA 58.046 37.037 0.00 0.00 0.00 3.32
8 9 7.450634 TGGTCTATAATCCGAGTATTTGTAGCT 59.549 37.037 0.00 0.00 0.00 3.32
9 10 7.600065 TGGTCTATAATCCGAGTATTTGTAGC 58.400 38.462 0.00 0.00 0.00 3.58
12 13 9.847224 AAAATGGTCTATAATCCGAGTATTTGT 57.153 29.630 0.00 0.00 0.00 2.83
14 15 9.503399 GGAAAATGGTCTATAATCCGAGTATTT 57.497 33.333 0.00 0.00 0.00 1.40
15 16 7.817962 CGGAAAATGGTCTATAATCCGAGTATT 59.182 37.037 13.96 0.00 44.03 1.89
16 17 7.039223 ACGGAAAATGGTCTATAATCCGAGTAT 60.039 37.037 21.69 4.49 44.03 2.12
17 18 6.266103 ACGGAAAATGGTCTATAATCCGAGTA 59.734 38.462 21.69 0.00 44.03 2.59
18 19 5.070047 ACGGAAAATGGTCTATAATCCGAGT 59.930 40.000 21.69 5.28 44.03 4.18
19 20 5.539048 ACGGAAAATGGTCTATAATCCGAG 58.461 41.667 21.69 3.08 44.03 4.63
20 21 5.540400 ACGGAAAATGGTCTATAATCCGA 57.460 39.130 21.69 0.00 44.03 4.55
21 22 7.718272 TTTACGGAAAATGGTCTATAATCCG 57.282 36.000 16.29 16.29 45.46 4.18
27 28 9.797556 GCTTTTAATTTACGGAAAATGGTCTAT 57.202 29.630 0.00 0.00 37.85 1.98
28 29 7.964011 CGCTTTTAATTTACGGAAAATGGTCTA 59.036 33.333 0.00 0.00 37.85 2.59
29 30 6.804783 CGCTTTTAATTTACGGAAAATGGTCT 59.195 34.615 0.00 0.00 37.85 3.85
30 31 6.583427 ACGCTTTTAATTTACGGAAAATGGTC 59.417 34.615 0.00 0.00 37.85 4.02
31 32 6.363896 CACGCTTTTAATTTACGGAAAATGGT 59.636 34.615 0.00 0.00 37.85 3.55
32 33 6.363896 ACACGCTTTTAATTTACGGAAAATGG 59.636 34.615 0.00 0.00 37.85 3.16
33 34 7.217201 CACACGCTTTTAATTTACGGAAAATG 58.783 34.615 0.00 0.00 37.85 2.32
34 35 6.363896 CCACACGCTTTTAATTTACGGAAAAT 59.636 34.615 0.00 0.00 39.56 1.82
35 36 5.686397 CCACACGCTTTTAATTTACGGAAAA 59.314 36.000 0.00 0.00 0.00 2.29
36 37 5.213675 CCACACGCTTTTAATTTACGGAAA 58.786 37.500 0.00 0.00 0.00 3.13
37 38 4.275443 ACCACACGCTTTTAATTTACGGAA 59.725 37.500 0.00 0.00 0.00 4.30
38 39 3.814283 ACCACACGCTTTTAATTTACGGA 59.186 39.130 0.00 0.00 0.00 4.69
39 40 4.149910 ACCACACGCTTTTAATTTACGG 57.850 40.909 0.00 0.00 0.00 4.02
40 41 7.238571 AGAATACCACACGCTTTTAATTTACG 58.761 34.615 0.00 0.00 0.00 3.18
41 42 8.959734 AAGAATACCACACGCTTTTAATTTAC 57.040 30.769 0.00 0.00 0.00 2.01
42 43 9.968870 AAAAGAATACCACACGCTTTTAATTTA 57.031 25.926 0.00 0.00 37.11 1.40
43 44 8.880878 AAAAGAATACCACACGCTTTTAATTT 57.119 26.923 0.00 0.00 37.11 1.82
44 45 8.357402 AGAAAAGAATACCACACGCTTTTAATT 58.643 29.630 0.00 0.00 38.47 1.40
45 46 7.882179 AGAAAAGAATACCACACGCTTTTAAT 58.118 30.769 0.00 0.00 38.47 1.40
46 47 7.266922 AGAAAAGAATACCACACGCTTTTAA 57.733 32.000 0.00 0.00 38.47 1.52
47 48 6.072893 GGAGAAAAGAATACCACACGCTTTTA 60.073 38.462 0.00 0.00 38.47 1.52
48 49 5.278315 GGAGAAAAGAATACCACACGCTTTT 60.278 40.000 0.00 0.00 40.35 2.27
49 50 4.215613 GGAGAAAAGAATACCACACGCTTT 59.784 41.667 0.00 0.00 0.00 3.51
50 51 3.751698 GGAGAAAAGAATACCACACGCTT 59.248 43.478 0.00 0.00 0.00 4.68
51 52 3.335579 GGAGAAAAGAATACCACACGCT 58.664 45.455 0.00 0.00 0.00 5.07
52 53 2.418976 GGGAGAAAAGAATACCACACGC 59.581 50.000 0.00 0.00 0.00 5.34
53 54 2.671396 CGGGAGAAAAGAATACCACACG 59.329 50.000 0.00 0.00 0.00 4.49
54 55 3.671716 ACGGGAGAAAAGAATACCACAC 58.328 45.455 0.00 0.00 0.00 3.82
55 56 4.069304 CAACGGGAGAAAAGAATACCACA 58.931 43.478 0.00 0.00 0.00 4.17
56 57 3.119955 GCAACGGGAGAAAAGAATACCAC 60.120 47.826 0.00 0.00 0.00 4.16
57 58 3.078837 GCAACGGGAGAAAAGAATACCA 58.921 45.455 0.00 0.00 0.00 3.25
58 59 3.078837 TGCAACGGGAGAAAAGAATACC 58.921 45.455 0.00 0.00 0.00 2.73
59 60 4.023536 TGTTGCAACGGGAGAAAAGAATAC 60.024 41.667 23.79 0.00 0.00 1.89
60 61 4.138290 TGTTGCAACGGGAGAAAAGAATA 58.862 39.130 23.79 0.00 0.00 1.75
61 62 2.955660 TGTTGCAACGGGAGAAAAGAAT 59.044 40.909 23.79 0.00 0.00 2.40
62 63 2.370349 TGTTGCAACGGGAGAAAAGAA 58.630 42.857 23.79 0.00 0.00 2.52
63 64 2.045561 TGTTGCAACGGGAGAAAAGA 57.954 45.000 23.79 0.00 0.00 2.52
64 65 2.857748 GTTTGTTGCAACGGGAGAAAAG 59.142 45.455 23.79 0.00 0.00 2.27
65 66 2.732597 CGTTTGTTGCAACGGGAGAAAA 60.733 45.455 23.79 14.50 38.61 2.29
66 67 1.202200 CGTTTGTTGCAACGGGAGAAA 60.202 47.619 23.79 15.17 38.61 2.52
67 68 0.378962 CGTTTGTTGCAACGGGAGAA 59.621 50.000 23.79 9.94 38.61 2.87
68 69 2.018544 CGTTTGTTGCAACGGGAGA 58.981 52.632 23.79 3.67 38.61 3.71
69 70 4.607024 CGTTTGTTGCAACGGGAG 57.393 55.556 23.79 12.03 38.61 4.30
73 74 0.655733 AGAGTCCGTTTGTTGCAACG 59.344 50.000 23.79 13.15 41.62 4.10
74 75 2.844122 AAGAGTCCGTTTGTTGCAAC 57.156 45.000 22.83 22.83 0.00 4.17
75 76 3.506810 CAAAAGAGTCCGTTTGTTGCAA 58.493 40.909 0.00 0.00 37.12 4.08
76 77 2.733858 GCAAAAGAGTCCGTTTGTTGCA 60.734 45.455 14.94 0.00 41.62 4.08
77 78 1.852280 GCAAAAGAGTCCGTTTGTTGC 59.148 47.619 14.94 4.54 41.62 4.17
78 79 3.420839 AGCAAAAGAGTCCGTTTGTTG 57.579 42.857 14.94 0.00 41.62 3.33
79 80 4.196971 ACTAGCAAAAGAGTCCGTTTGTT 58.803 39.130 14.94 12.48 41.62 2.83
80 81 3.805207 ACTAGCAAAAGAGTCCGTTTGT 58.195 40.909 14.94 7.50 41.62 2.83
81 82 5.637810 TCATACTAGCAAAAGAGTCCGTTTG 59.362 40.000 11.00 11.00 42.19 2.93
82 83 5.638234 GTCATACTAGCAAAAGAGTCCGTTT 59.362 40.000 0.00 0.00 0.00 3.60
83 84 5.047235 AGTCATACTAGCAAAAGAGTCCGTT 60.047 40.000 0.00 0.00 0.00 4.44
84 85 4.463186 AGTCATACTAGCAAAAGAGTCCGT 59.537 41.667 0.00 0.00 0.00 4.69
85 86 5.000012 AGTCATACTAGCAAAAGAGTCCG 58.000 43.478 0.00 0.00 0.00 4.79
86 87 8.773404 TTTAAGTCATACTAGCAAAAGAGTCC 57.227 34.615 0.00 0.00 0.00 3.85
93 94 9.309516 CCTCGTATTTTAAGTCATACTAGCAAA 57.690 33.333 0.00 0.00 0.00 3.68
94 95 7.924412 CCCTCGTATTTTAAGTCATACTAGCAA 59.076 37.037 0.00 0.00 0.00 3.91
95 96 7.431249 CCCTCGTATTTTAAGTCATACTAGCA 58.569 38.462 0.00 0.00 0.00 3.49
96 97 6.867293 CCCCTCGTATTTTAAGTCATACTAGC 59.133 42.308 0.00 0.00 0.00 3.42
97 98 6.867293 GCCCCTCGTATTTTAAGTCATACTAG 59.133 42.308 0.00 0.00 0.00 2.57
98 99 6.324512 TGCCCCTCGTATTTTAAGTCATACTA 59.675 38.462 0.00 0.00 0.00 1.82
99 100 5.129815 TGCCCCTCGTATTTTAAGTCATACT 59.870 40.000 0.00 0.00 0.00 2.12
100 101 5.235831 GTGCCCCTCGTATTTTAAGTCATAC 59.764 44.000 0.00 0.00 0.00 2.39
101 102 5.104859 TGTGCCCCTCGTATTTTAAGTCATA 60.105 40.000 0.00 0.00 0.00 2.15
102 103 4.196971 GTGCCCCTCGTATTTTAAGTCAT 58.803 43.478 0.00 0.00 0.00 3.06
103 104 3.008157 TGTGCCCCTCGTATTTTAAGTCA 59.992 43.478 0.00 0.00 0.00 3.41
104 105 3.602483 TGTGCCCCTCGTATTTTAAGTC 58.398 45.455 0.00 0.00 0.00 3.01
105 106 3.706600 TGTGCCCCTCGTATTTTAAGT 57.293 42.857 0.00 0.00 0.00 2.24
106 107 4.216687 TGTTTGTGCCCCTCGTATTTTAAG 59.783 41.667 0.00 0.00 0.00 1.85
107 108 4.142790 TGTTTGTGCCCCTCGTATTTTAA 58.857 39.130 0.00 0.00 0.00 1.52
108 109 3.752665 TGTTTGTGCCCCTCGTATTTTA 58.247 40.909 0.00 0.00 0.00 1.52
109 110 2.588620 TGTTTGTGCCCCTCGTATTTT 58.411 42.857 0.00 0.00 0.00 1.82
110 111 2.279935 TGTTTGTGCCCCTCGTATTT 57.720 45.000 0.00 0.00 0.00 1.40
111 112 2.279935 TTGTTTGTGCCCCTCGTATT 57.720 45.000 0.00 0.00 0.00 1.89
112 113 1.883926 GTTTGTTTGTGCCCCTCGTAT 59.116 47.619 0.00 0.00 0.00 3.06
113 114 1.310904 GTTTGTTTGTGCCCCTCGTA 58.689 50.000 0.00 0.00 0.00 3.43
114 115 1.388837 GGTTTGTTTGTGCCCCTCGT 61.389 55.000 0.00 0.00 0.00 4.18
115 116 1.362355 GGTTTGTTTGTGCCCCTCG 59.638 57.895 0.00 0.00 0.00 4.63
116 117 0.389025 CTGGTTTGTTTGTGCCCCTC 59.611 55.000 0.00 0.00 0.00 4.30
117 118 1.048160 CCTGGTTTGTTTGTGCCCCT 61.048 55.000 0.00 0.00 0.00 4.79
118 119 1.045911 TCCTGGTTTGTTTGTGCCCC 61.046 55.000 0.00 0.00 0.00 5.80
119 120 1.047801 ATCCTGGTTTGTTTGTGCCC 58.952 50.000 0.00 0.00 0.00 5.36
120 121 2.102252 TCAATCCTGGTTTGTTTGTGCC 59.898 45.455 15.22 0.00 0.00 5.01
121 122 3.383761 CTCAATCCTGGTTTGTTTGTGC 58.616 45.455 15.22 0.00 0.00 4.57
122 123 3.384467 ACCTCAATCCTGGTTTGTTTGTG 59.616 43.478 15.22 5.59 31.62 3.33
123 124 3.642141 ACCTCAATCCTGGTTTGTTTGT 58.358 40.909 15.22 9.34 31.62 2.83
124 125 4.827284 AGTACCTCAATCCTGGTTTGTTTG 59.173 41.667 15.22 8.84 37.74 2.93
125 126 5.061721 AGTACCTCAATCCTGGTTTGTTT 57.938 39.130 15.22 5.75 37.74 2.83
126 127 4.724279 AGTACCTCAATCCTGGTTTGTT 57.276 40.909 15.22 6.03 37.74 2.83
127 128 4.595781 TGTAGTACCTCAATCCTGGTTTGT 59.404 41.667 15.22 1.90 37.74 2.83
128 129 5.160607 TGTAGTACCTCAATCCTGGTTTG 57.839 43.478 10.60 10.60 37.74 2.93
132 133 7.005296 AGTATACTGTAGTACCTCAATCCTGG 58.995 42.308 4.10 0.00 32.72 4.45
138 139 8.050930 TCACATGAGTATACTGTAGTACCTCAA 58.949 37.037 10.90 7.44 41.26 3.02
139 140 7.571025 TCACATGAGTATACTGTAGTACCTCA 58.429 38.462 10.90 18.09 41.70 3.86
146 147 8.873830 CCACTTTTTCACATGAGTATACTGTAG 58.126 37.037 10.90 1.89 0.00 2.74
149 150 7.387673 TGTCCACTTTTTCACATGAGTATACTG 59.612 37.037 10.90 0.00 0.00 2.74
153 154 7.581213 TTTGTCCACTTTTTCACATGAGTAT 57.419 32.000 0.00 0.00 0.00 2.12
169 170 4.539870 CACAGATGTGTCATTTTGTCCAC 58.460 43.478 4.77 0.00 40.96 4.02
226 227 0.106708 ATACGCTATGTGCCAGTGGG 59.893 55.000 12.15 0.00 38.78 4.61
269 273 7.060633 ACGAGAAATTTCATTAAAATGACGTGC 59.939 33.333 19.99 0.00 44.54 5.34
270 274 8.434870 ACGAGAAATTTCATTAAAATGACGTG 57.565 30.769 19.99 0.00 44.54 4.49
309 313 4.981812 ACGGGGTCATTAAACTTTTCTCT 58.018 39.130 0.00 0.00 0.00 3.10
312 316 4.452114 ACGTACGGGGTCATTAAACTTTTC 59.548 41.667 21.06 0.00 0.00 2.29
316 320 2.415893 CGACGTACGGGGTCATTAAACT 60.416 50.000 21.06 0.00 38.46 2.66
319 323 0.179140 GCGACGTACGGGGTCATTAA 60.179 55.000 21.06 0.00 42.83 1.40
362 367 0.181114 TACATGATGGTGGAGCTGGC 59.819 55.000 0.00 0.00 0.00 4.85
366 371 2.097466 CCGTTTTACATGATGGTGGAGC 59.903 50.000 0.00 0.00 0.00 4.70
368 373 2.306219 TCCCGTTTTACATGATGGTGGA 59.694 45.455 0.00 0.00 0.00 4.02
369 374 2.682856 CTCCCGTTTTACATGATGGTGG 59.317 50.000 0.00 0.00 0.00 4.61
371 376 2.944094 GCCTCCCGTTTTACATGATGGT 60.944 50.000 0.00 0.00 0.00 3.55
374 379 2.238646 TCAGCCTCCCGTTTTACATGAT 59.761 45.455 0.00 0.00 0.00 2.45
375 380 1.626321 TCAGCCTCCCGTTTTACATGA 59.374 47.619 0.00 0.00 0.00 3.07
376 381 2.107950 TCAGCCTCCCGTTTTACATG 57.892 50.000 0.00 0.00 0.00 3.21
377 382 2.741878 CGATCAGCCTCCCGTTTTACAT 60.742 50.000 0.00 0.00 0.00 2.29
499 536 1.927569 CGAGAGGGAGGTGGAGGAGA 61.928 65.000 0.00 0.00 0.00 3.71
526 563 3.632049 TGGGGGAGGTGGGATGGA 61.632 66.667 0.00 0.00 0.00 3.41
537 574 4.741239 GTGGAGGAGGCTGGGGGA 62.741 72.222 0.00 0.00 0.00 4.81
603 643 1.844130 GGGGTGGGTGAGTTGAGTT 59.156 57.895 0.00 0.00 0.00 3.01
608 648 3.246880 GGTCGGGGTGGGTGAGTT 61.247 66.667 0.00 0.00 0.00 3.01
718 769 4.838486 GAGAGCGCGTGGAGACGG 62.838 72.222 8.43 0.00 46.20 4.79
794 857 1.130373 CCGTAAACACAGCGCAATCAT 59.870 47.619 11.47 0.00 0.00 2.45
850 913 2.592459 GCGTCAGACAAAACACAAACAC 59.408 45.455 0.41 0.00 0.00 3.32
864 936 1.005748 CTTCCACTGCAGCGTCAGA 60.006 57.895 15.27 0.25 37.51 3.27
927 999 2.592993 CCTCCTCCGCACCTCCAAA 61.593 63.158 0.00 0.00 0.00 3.28
1270 1364 9.252962 GTAAAACATTAGTATAGCTTAGGCGAA 57.747 33.333 0.00 0.00 44.37 4.70
1272 1366 8.813643 AGTAAAACATTAGTATAGCTTAGGCG 57.186 34.615 0.00 0.00 44.37 5.52
1301 1399 3.003275 GGCACGTCAAAGTTCTGAAATGA 59.997 43.478 0.00 0.00 0.00 2.57
1327 1426 1.130749 ACGAGACACGCATACTGACTC 59.869 52.381 0.00 0.00 46.94 3.36
1377 1476 2.852413 CACACGGAAATCTACTACGCAG 59.148 50.000 0.00 0.00 0.00 5.18
1453 1552 4.800471 GGAAACAACAAAAGTCAGCTGAAG 59.200 41.667 20.19 8.77 0.00 3.02
1630 1736 4.741342 CTCAACTACTAACAACCTACCCG 58.259 47.826 0.00 0.00 0.00 5.28
1808 1916 4.966366 GTCGATTCAGTATCAATTTGCAGC 59.034 41.667 0.00 0.00 32.45 5.25
1871 1979 9.512435 GCTGTCGATTCAGTTAGTTAACTATAA 57.488 33.333 15.92 8.86 44.19 0.98
1872 1980 8.133627 GGCTGTCGATTCAGTTAGTTAACTATA 58.866 37.037 15.92 5.03 44.19 1.31
1873 1981 6.979238 GGCTGTCGATTCAGTTAGTTAACTAT 59.021 38.462 15.92 1.05 44.19 2.12
1874 1982 6.327934 GGCTGTCGATTCAGTTAGTTAACTA 58.672 40.000 11.38 11.38 44.19 2.24
1875 1983 5.169295 GGCTGTCGATTCAGTTAGTTAACT 58.831 41.667 13.68 13.68 46.76 2.24
1876 1984 4.031426 CGGCTGTCGATTCAGTTAGTTAAC 59.969 45.833 0.00 0.00 42.43 2.01
1877 1985 4.171005 CGGCTGTCGATTCAGTTAGTTAA 58.829 43.478 0.00 0.00 42.43 2.01
1878 1986 3.192001 ACGGCTGTCGATTCAGTTAGTTA 59.808 43.478 9.35 0.00 42.43 2.24
1880 1988 1.544691 ACGGCTGTCGATTCAGTTAGT 59.455 47.619 9.35 1.14 42.43 2.24
1882 1990 3.490249 CCATACGGCTGTCGATTCAGTTA 60.490 47.826 9.35 0.00 42.43 2.24
1884 1992 1.202417 CCATACGGCTGTCGATTCAGT 60.202 52.381 9.35 0.00 42.43 3.41
1885 1993 1.202417 ACCATACGGCTGTCGATTCAG 60.202 52.381 9.35 0.00 42.43 3.02
1887 1995 2.787601 TACCATACGGCTGTCGATTC 57.212 50.000 9.35 0.00 42.43 2.52
1888 1996 3.118884 AGTTTACCATACGGCTGTCGATT 60.119 43.478 9.35 0.00 42.43 3.34
1889 1997 2.429610 AGTTTACCATACGGCTGTCGAT 59.570 45.455 9.35 0.00 42.43 3.59
1890 1998 1.820519 AGTTTACCATACGGCTGTCGA 59.179 47.619 9.35 0.00 42.43 4.20
1891 1999 2.288961 AGTTTACCATACGGCTGTCG 57.711 50.000 0.00 0.00 45.88 4.35
1892 2000 5.173664 AGTAAAGTTTACCATACGGCTGTC 58.826 41.667 19.81 0.00 34.57 3.51
1893 2001 5.156608 AGTAAAGTTTACCATACGGCTGT 57.843 39.130 19.81 2.42 34.57 4.40
1894 2002 4.569564 GGAGTAAAGTTTACCATACGGCTG 59.430 45.833 19.81 0.00 34.57 4.85
1895 2003 4.678840 CGGAGTAAAGTTTACCATACGGCT 60.679 45.833 19.81 1.43 34.57 5.52
1896 2004 3.553105 CGGAGTAAAGTTTACCATACGGC 59.447 47.826 19.81 3.92 34.57 5.68
1897 2005 4.747810 ACGGAGTAAAGTTTACCATACGG 58.252 43.478 19.81 14.89 41.94 4.02
1898 2006 5.456822 GCTACGGAGTAAAGTTTACCATACG 59.543 44.000 19.81 17.06 45.13 3.06
1899 2007 6.332630 TGCTACGGAGTAAAGTTTACCATAC 58.667 40.000 19.81 10.43 45.13 2.39
1900 2008 6.528537 TGCTACGGAGTAAAGTTTACCATA 57.471 37.500 19.81 8.35 45.13 2.74
1901 2009 5.410355 TGCTACGGAGTAAAGTTTACCAT 57.590 39.130 19.81 4.86 45.13 3.55
1902 2010 4.870123 TGCTACGGAGTAAAGTTTACCA 57.130 40.909 19.81 8.02 45.13 3.25
1903 2011 9.702494 ATTATATGCTACGGAGTAAAGTTTACC 57.298 33.333 19.81 12.27 45.13 2.85
1908 2016 9.609346 ACAAAATTATATGCTACGGAGTAAAGT 57.391 29.630 0.00 0.00 45.13 2.66
1943 2051 2.159627 CCGTTCGCTGATTGCTTTTAGT 59.840 45.455 0.00 0.00 40.11 2.24
1958 2066 2.739913 TCCTTGCTGAAATTACCGTTCG 59.260 45.455 0.00 0.00 0.00 3.95
1968 2076 5.659440 ACTTTTGACTTTCCTTGCTGAAA 57.341 34.783 0.00 0.00 33.42 2.69
1987 2095 1.422402 ACCGTGGTCAATTGGGTACTT 59.578 47.619 5.42 0.00 0.00 2.24
1988 2096 1.061546 ACCGTGGTCAATTGGGTACT 58.938 50.000 5.42 0.00 0.00 2.73
2034 2145 9.672673 TGAAACAATCTTCCAAACCAAATAAAA 57.327 25.926 0.00 0.00 0.00 1.52
2047 2164 6.095377 GTCCATTGACATGAAACAATCTTCC 58.905 40.000 0.00 0.00 41.37 3.46
2048 2165 6.680810 TGTCCATTGACATGAAACAATCTTC 58.319 36.000 0.00 2.55 46.40 2.87
2069 2186 2.048603 GGCCCACTGCAGGATTGTC 61.049 63.158 19.93 0.85 43.89 3.18
2072 2189 0.252375 ATTTGGCCCACTGCAGGATT 60.252 50.000 19.93 0.00 43.89 3.01
2073 2190 0.630673 TATTTGGCCCACTGCAGGAT 59.369 50.000 19.93 0.00 43.89 3.24
2074 2191 0.407528 TTATTTGGCCCACTGCAGGA 59.592 50.000 19.93 0.00 43.89 3.86
2076 2193 1.549203 ACTTATTTGGCCCACTGCAG 58.451 50.000 13.48 13.48 43.89 4.41
2093 2218 7.499321 TCGTGTTAACATAATGACCAAAACT 57.501 32.000 12.26 0.00 0.00 2.66
2094 2219 8.635124 CATTCGTGTTAACATAATGACCAAAAC 58.365 33.333 26.77 7.16 35.70 2.43
2104 2229 9.037737 GGTCTATTAGCATTCGTGTTAACATAA 57.962 33.333 12.26 9.91 0.00 1.90
2113 2238 6.250819 CACAAAAGGTCTATTAGCATTCGTG 58.749 40.000 0.00 0.00 0.00 4.35
2114 2239 5.163754 GCACAAAAGGTCTATTAGCATTCGT 60.164 40.000 0.00 0.00 0.00 3.85
2307 2432 7.618117 AGAAAACCTTAGGAAAAAGAAGACCAA 59.382 33.333 4.77 0.00 0.00 3.67
2506 2633 7.004086 AGTGTGGGTTTTATCAGATCTTCAAA 58.996 34.615 0.00 0.00 0.00 2.69
2539 2666 9.029243 CATTTTAACTGCAACAAATTGACTACA 57.971 29.630 0.00 0.00 38.15 2.74
2695 2822 0.621571 TCCCATACTTCTGGCAGGCT 60.622 55.000 15.73 0.00 34.77 4.58
2815 2944 4.044065 ACACCTCCAATCAGTCCCAATAAA 59.956 41.667 0.00 0.00 0.00 1.40
2817 2946 3.189606 ACACCTCCAATCAGTCCCAATA 58.810 45.455 0.00 0.00 0.00 1.90
3001 3130 9.979897 CCATTCCCTATAGGATATCATTTCAAA 57.020 33.333 21.07 0.00 46.94 2.69
3038 3167 3.059597 CAGTGTACAGAGAAAGTTTGCCG 60.060 47.826 0.00 0.00 0.00 5.69
3124 3253 9.720769 CTGGGATAACTAAAGAAGACTAAAACA 57.279 33.333 0.00 0.00 0.00 2.83
3125 3254 9.722184 ACTGGGATAACTAAAGAAGACTAAAAC 57.278 33.333 0.00 0.00 0.00 2.43
3140 3269 9.726438 GTTGATAGCAAATATACTGGGATAACT 57.274 33.333 0.00 0.00 35.42 2.24
3332 3461 3.442273 ACGTCTTGGTTCTTCAAGCAAAA 59.558 39.130 1.44 0.00 46.68 2.44
3550 3681 4.751767 TCAAACTGGTGCAAAGGAAATT 57.248 36.364 0.00 0.00 0.00 1.82
3561 3692 2.426738 TGGCAAAGTCTTCAAACTGGTG 59.573 45.455 0.00 0.00 0.00 4.17
3562 3693 2.733956 TGGCAAAGTCTTCAAACTGGT 58.266 42.857 0.00 0.00 0.00 4.00
3593 3724 6.979817 TGCTATATTTCGCAAGCAAATCAAAT 59.020 30.769 0.00 0.00 41.74 2.32
3743 3877 7.703197 TGCAATCAACACATTTTATATCAGCAG 59.297 33.333 0.00 0.00 0.00 4.24
3809 3943 0.834612 TTCCACCGACAACCTTCAGT 59.165 50.000 0.00 0.00 0.00 3.41
3887 4021 3.425193 CAGTTCAGCAAAAATTACACCGC 59.575 43.478 0.00 0.00 0.00 5.68
3953 4087 0.392193 CCAGTTCCAGCCTGCAGTAG 60.392 60.000 13.81 0.00 0.00 2.57
4172 4315 9.863845 TCTGTGTTCAAAATCAATATCGTACTA 57.136 29.630 0.00 0.00 0.00 1.82
4173 4316 8.656849 GTCTGTGTTCAAAATCAATATCGTACT 58.343 33.333 0.00 0.00 0.00 2.73
4227 4380 3.670625 TGGAACTAACGATCAAACCCTG 58.329 45.455 0.00 0.00 0.00 4.45
4495 4648 0.991920 CCTTAGTGAAAGCCCTCCCA 59.008 55.000 0.00 0.00 33.49 4.37
4498 4651 3.704800 ACTTCCTTAGTGAAAGCCCTC 57.295 47.619 0.00 0.00 35.19 4.30
4579 4732 4.152402 CACTGATCCCAGAAAGTTACAACG 59.848 45.833 0.00 0.00 43.02 4.10
4718 4871 4.890581 TGTGTATGTTGGCAAACTAACCTT 59.109 37.500 0.00 0.00 37.19 3.50
4742 4895 0.098376 CGAATTTGCAGCCAGCTCTC 59.902 55.000 0.19 0.00 45.94 3.20
4760 4913 6.810888 ACATCAAATGTTTTGACTTCAACG 57.189 33.333 4.90 0.00 41.63 4.10
4794 4948 6.506147 TGCATTTCATGGATAGCACAATAAC 58.494 36.000 0.00 0.00 0.00 1.89
4822 4984 7.516198 ACATGAAGTGTCTTTCATTAAGCTT 57.484 32.000 3.48 3.48 43.41 3.74
4841 5003 9.066892 ACAAGTATAAGAAGAAAGCAAACATGA 57.933 29.630 0.00 0.00 0.00 3.07
4885 5047 4.333372 CCCTTTTTGTGCCAATTATGATGC 59.667 41.667 0.00 0.00 0.00 3.91
5304 5467 7.809331 TGAACACATGAAACATTGATAAGCTTC 59.191 33.333 0.00 0.00 0.00 3.86
5306 5469 7.218228 TGAACACATGAAACATTGATAAGCT 57.782 32.000 0.00 0.00 0.00 3.74
5361 5524 4.367039 TCCCTTGTCGAAATTCTCCTTT 57.633 40.909 0.00 0.00 0.00 3.11
5362 5525 4.518249 GATCCCTTGTCGAAATTCTCCTT 58.482 43.478 0.00 0.00 0.00 3.36
5370 5533 4.261801 GAAAGATGGATCCCTTGTCGAAA 58.738 43.478 9.90 0.00 0.00 3.46
5847 6010 5.221342 ACCTTGAGAACTAGAACTCTGTGTG 60.221 44.000 16.79 7.86 34.65 3.82
5856 6019 7.676683 AGCCATATTACCTTGAGAACTAGAA 57.323 36.000 0.00 0.00 0.00 2.10
5932 6095 5.662657 ACCCTCCATTAGCTAATTTGCATTT 59.337 36.000 16.46 0.00 34.99 2.32
5946 6109 4.219115 TGAAACTTTTGCACCCTCCATTA 58.781 39.130 0.00 0.00 0.00 1.90
5947 6110 3.037549 TGAAACTTTTGCACCCTCCATT 58.962 40.909 0.00 0.00 0.00 3.16
5948 6111 2.676748 TGAAACTTTTGCACCCTCCAT 58.323 42.857 0.00 0.00 0.00 3.41
5949 6112 2.151502 TGAAACTTTTGCACCCTCCA 57.848 45.000 0.00 0.00 0.00 3.86
5950 6113 3.653344 GATTGAAACTTTTGCACCCTCC 58.347 45.455 0.00 0.00 0.00 4.30
5951 6114 3.004315 TCGATTGAAACTTTTGCACCCTC 59.996 43.478 0.00 0.00 0.00 4.30
5952 6115 2.955660 TCGATTGAAACTTTTGCACCCT 59.044 40.909 0.00 0.00 0.00 4.34
5953 6116 3.363341 TCGATTGAAACTTTTGCACCC 57.637 42.857 0.00 0.00 0.00 4.61
5954 6117 4.150451 CCATTCGATTGAAACTTTTGCACC 59.850 41.667 8.84 0.00 37.71 5.01
5955 6118 4.150451 CCCATTCGATTGAAACTTTTGCAC 59.850 41.667 8.84 0.00 37.71 4.57
5956 6119 4.305769 CCCATTCGATTGAAACTTTTGCA 58.694 39.130 8.84 0.00 37.71 4.08
5957 6120 3.679502 CCCCATTCGATTGAAACTTTTGC 59.320 43.478 8.84 0.00 37.71 3.68
5958 6121 5.132897 TCCCCATTCGATTGAAACTTTTG 57.867 39.130 8.84 0.00 37.71 2.44
5959 6122 5.799827 TTCCCCATTCGATTGAAACTTTT 57.200 34.783 8.84 0.00 37.71 2.27
5960 6123 5.069781 TGTTTCCCCATTCGATTGAAACTTT 59.930 36.000 17.01 0.00 43.11 2.66
5961 6124 4.586841 TGTTTCCCCATTCGATTGAAACTT 59.413 37.500 17.01 0.00 43.11 2.66
5962 6125 4.148838 TGTTTCCCCATTCGATTGAAACT 58.851 39.130 17.01 0.00 43.11 2.66
5963 6126 4.513198 TGTTTCCCCATTCGATTGAAAC 57.487 40.909 8.84 11.11 43.04 2.78
5964 6127 5.736951 AATGTTTCCCCATTCGATTGAAA 57.263 34.783 8.84 0.00 37.71 2.69
5965 6128 5.736951 AAATGTTTCCCCATTCGATTGAA 57.263 34.783 8.84 0.00 34.01 2.69
5966 6129 8.526667 TTATAAATGTTTCCCCATTCGATTGA 57.473 30.769 8.84 0.00 34.01 2.57
5974 6137 9.990868 GGGAGTATATTATAAATGTTTCCCCAT 57.009 33.333 13.04 0.00 35.57 4.00
5975 6138 9.189750 AGGGAGTATATTATAAATGTTTCCCCA 57.810 33.333 17.44 0.00 41.12 4.96
5976 6139 9.682465 GAGGGAGTATATTATAAATGTTTCCCC 57.318 37.037 17.44 10.84 41.12 4.81
5977 6140 9.682465 GGAGGGAGTATATTATAAATGTTTCCC 57.318 37.037 14.98 14.98 40.64 3.97
5978 6141 9.379791 CGGAGGGAGTATATTATAAATGTTTCC 57.620 37.037 0.00 0.00 0.00 3.13
5979 6142 9.939802 ACGGAGGGAGTATATTATAAATGTTTC 57.060 33.333 0.00 0.00 0.00 2.78
5981 6144 9.939802 GAACGGAGGGAGTATATTATAAATGTT 57.060 33.333 0.00 0.00 0.00 2.71
5982 6145 8.537858 GGAACGGAGGGAGTATATTATAAATGT 58.462 37.037 0.00 0.00 0.00 2.71
5983 6146 8.759782 AGGAACGGAGGGAGTATATTATAAATG 58.240 37.037 0.00 0.00 0.00 2.32
5984 6147 8.912614 AGGAACGGAGGGAGTATATTATAAAT 57.087 34.615 0.00 0.00 0.00 1.40
5985 6148 9.827198 TTAGGAACGGAGGGAGTATATTATAAA 57.173 33.333 0.00 0.00 0.00 1.40
5986 6149 9.827198 TTTAGGAACGGAGGGAGTATATTATAA 57.173 33.333 0.00 0.00 0.00 0.98
5988 6151 8.912614 ATTTAGGAACGGAGGGAGTATATTAT 57.087 34.615 0.00 0.00 0.00 1.28
5990 6153 8.759782 CATATTTAGGAACGGAGGGAGTATATT 58.240 37.037 0.00 0.00 0.00 1.28
5991 6154 7.899709 ACATATTTAGGAACGGAGGGAGTATAT 59.100 37.037 0.00 0.00 0.00 0.86
5992 6155 7.243824 ACATATTTAGGAACGGAGGGAGTATA 58.756 38.462 0.00 0.00 0.00 1.47
5993 6156 6.082707 ACATATTTAGGAACGGAGGGAGTAT 58.917 40.000 0.00 0.00 0.00 2.12
5994 6157 5.461327 ACATATTTAGGAACGGAGGGAGTA 58.539 41.667 0.00 0.00 0.00 2.59
5995 6158 4.296056 ACATATTTAGGAACGGAGGGAGT 58.704 43.478 0.00 0.00 0.00 3.85
5996 6159 4.589374 AGACATATTTAGGAACGGAGGGAG 59.411 45.833 0.00 0.00 0.00 4.30
5997 6160 4.553678 AGACATATTTAGGAACGGAGGGA 58.446 43.478 0.00 0.00 0.00 4.20
5998 6161 4.957684 AGACATATTTAGGAACGGAGGG 57.042 45.455 0.00 0.00 0.00 4.30
5999 6162 9.021807 TCTAATAGACATATTTAGGAACGGAGG 57.978 37.037 0.00 0.00 33.58 4.30
6001 6164 9.803507 TCTCTAATAGACATATTTAGGAACGGA 57.196 33.333 0.00 0.00 33.58 4.69
6048 6211 9.466497 TTCATATTGAAATCTCTAAAAGGTGCT 57.534 29.630 0.00 0.00 32.71 4.40
6049 6212 9.508567 GTTCATATTGAAATCTCTAAAAGGTGC 57.491 33.333 0.00 0.00 38.22 5.01
6106 6269 9.210329 ACGAACACATGTACACATATTTTAGAA 57.790 29.630 0.00 0.00 34.26 2.10
6107 6270 8.766000 ACGAACACATGTACACATATTTTAGA 57.234 30.769 0.00 0.00 34.26 2.10
6110 6273 8.941977 ACATACGAACACATGTACACATATTTT 58.058 29.630 0.00 0.00 33.66 1.82
6111 6274 8.487313 ACATACGAACACATGTACACATATTT 57.513 30.769 0.00 0.00 33.66 1.40
6112 6275 9.244799 CTACATACGAACACATGTACACATATT 57.755 33.333 0.00 0.00 36.74 1.28
6113 6276 8.410912 ACTACATACGAACACATGTACACATAT 58.589 33.333 0.00 0.00 36.74 1.78
6114 6277 7.764331 ACTACATACGAACACATGTACACATA 58.236 34.615 0.00 0.00 36.74 2.29
6115 6278 6.627243 ACTACATACGAACACATGTACACAT 58.373 36.000 0.00 0.00 36.74 3.21
6116 6279 6.016213 ACTACATACGAACACATGTACACA 57.984 37.500 0.00 0.00 36.74 3.72
6117 6280 6.939551 AACTACATACGAACACATGTACAC 57.060 37.500 0.00 0.00 36.74 2.90
6118 6281 6.924612 ACAAACTACATACGAACACATGTACA 59.075 34.615 0.00 0.00 36.74 2.90
6119 6282 7.342318 ACAAACTACATACGAACACATGTAC 57.658 36.000 0.00 0.00 36.74 2.90
6120 6283 9.642327 AATACAAACTACATACGAACACATGTA 57.358 29.630 0.00 0.00 36.74 2.29
6121 6284 8.542497 AATACAAACTACATACGAACACATGT 57.458 30.769 0.00 0.00 38.81 3.21
6171 6334 9.515226 ACACAATACAGACACAGGTATATTTTT 57.485 29.630 0.00 0.00 30.37 1.94
6172 6335 9.515226 AACACAATACAGACACAGGTATATTTT 57.485 29.630 0.00 0.00 30.37 1.82
6176 6339 9.999660 TTTTAACACAATACAGACACAGGTATA 57.000 29.630 0.00 0.00 30.37 1.47
6177 6340 8.911918 TTTTAACACAATACAGACACAGGTAT 57.088 30.769 0.00 0.00 0.00 2.73
6178 6341 8.205512 TCTTTTAACACAATACAGACACAGGTA 58.794 33.333 0.00 0.00 0.00 3.08
6179 6342 7.051623 TCTTTTAACACAATACAGACACAGGT 58.948 34.615 0.00 0.00 0.00 4.00
6180 6343 7.490962 TCTTTTAACACAATACAGACACAGG 57.509 36.000 0.00 0.00 0.00 4.00
6181 6344 9.781834 TTTTCTTTTAACACAATACAGACACAG 57.218 29.630 0.00 0.00 0.00 3.66
6248 6411 9.911788 ACAGACTACATATGAATTTCTCCATTT 57.088 29.630 10.38 0.00 0.00 2.32
6252 6415 9.347934 CGATACAGACTACATATGAATTTCTCC 57.652 37.037 10.38 0.00 0.00 3.71
6253 6416 9.900710 ACGATACAGACTACATATGAATTTCTC 57.099 33.333 10.38 0.00 0.00 2.87
6260 6423 9.945904 AGAGATTACGATACAGACTACATATGA 57.054 33.333 10.38 0.00 0.00 2.15
6303 6466 9.753674 TTGACATAATCTACTCCCTTCATTTTT 57.246 29.630 0.00 0.00 0.00 1.94
6304 6467 9.753674 TTTGACATAATCTACTCCCTTCATTTT 57.246 29.630 0.00 0.00 0.00 1.82
6305 6468 9.753674 TTTTGACATAATCTACTCCCTTCATTT 57.246 29.630 0.00 0.00 0.00 2.32
6306 6469 9.401058 CTTTTGACATAATCTACTCCCTTCATT 57.599 33.333 0.00 0.00 0.00 2.57
6307 6470 8.772250 TCTTTTGACATAATCTACTCCCTTCAT 58.228 33.333 0.00 0.00 0.00 2.57
6308 6471 8.146053 TCTTTTGACATAATCTACTCCCTTCA 57.854 34.615 0.00 0.00 0.00 3.02
6309 6472 9.449719 TTTCTTTTGACATAATCTACTCCCTTC 57.550 33.333 0.00 0.00 0.00 3.46
6310 6473 9.454859 CTTTCTTTTGACATAATCTACTCCCTT 57.545 33.333 0.00 0.00 0.00 3.95
6311 6474 8.826765 TCTTTCTTTTGACATAATCTACTCCCT 58.173 33.333 0.00 0.00 0.00 4.20
6312 6475 8.884726 GTCTTTCTTTTGACATAATCTACTCCC 58.115 37.037 0.00 0.00 33.75 4.30
6313 6476 9.660180 AGTCTTTCTTTTGACATAATCTACTCC 57.340 33.333 0.00 0.00 35.81 3.85
6318 6481 9.965902 ATGGTAGTCTTTCTTTTGACATAATCT 57.034 29.630 0.00 0.00 35.81 2.40
6322 6485 8.792633 CCAAATGGTAGTCTTTCTTTTGACATA 58.207 33.333 11.56 0.00 35.81 2.29
6323 6486 7.661040 CCAAATGGTAGTCTTTCTTTTGACAT 58.339 34.615 11.56 0.00 35.81 3.06
6324 6487 7.038154 CCAAATGGTAGTCTTTCTTTTGACA 57.962 36.000 11.56 0.00 35.81 3.58
6338 6501 8.853230 TGCTTTTGATGCAAAACCAAATGGTAG 61.853 37.037 5.34 0.69 41.87 3.18
6339 6502 7.132392 TGCTTTTGATGCAAAACCAAATGGTA 61.132 34.615 5.34 0.00 41.87 3.25
6340 6503 6.380564 TGCTTTTGATGCAAAACCAAATGGT 61.381 36.000 0.00 0.00 43.42 3.55
6341 6504 4.036498 TGCTTTTGATGCAAAACCAAATGG 59.964 37.500 0.00 0.00 38.24 3.16
6342 6505 5.171147 TGCTTTTGATGCAAAACCAAATG 57.829 34.783 0.00 3.49 38.24 2.32
6343 6506 6.394025 AATGCTTTTGATGCAAAACCAAAT 57.606 29.167 0.00 0.00 44.01 2.32
6344 6507 5.831702 AATGCTTTTGATGCAAAACCAAA 57.168 30.435 0.00 0.00 44.01 3.28
6345 6508 5.831702 AAATGCTTTTGATGCAAAACCAA 57.168 30.435 0.00 0.00 44.01 3.67
6346 6509 5.831702 AAAATGCTTTTGATGCAAAACCA 57.168 30.435 0.00 2.81 44.01 3.67
6347 6510 6.737750 CGATAAAATGCTTTTGATGCAAAACC 59.262 34.615 0.00 0.00 44.01 3.27
6348 6511 6.246956 GCGATAAAATGCTTTTGATGCAAAAC 59.753 34.615 0.00 1.31 44.01 2.43
6349 6512 6.305639 GCGATAAAATGCTTTTGATGCAAAA 58.694 32.000 0.00 5.36 44.01 2.44
6350 6513 5.163874 GGCGATAAAATGCTTTTGATGCAAA 60.164 36.000 0.00 0.00 44.01 3.68
6351 6514 4.329528 GGCGATAAAATGCTTTTGATGCAA 59.670 37.500 0.00 0.00 44.01 4.08
6352 6515 3.864583 GGCGATAAAATGCTTTTGATGCA 59.135 39.130 0.00 0.00 44.95 3.96
6353 6516 3.061006 CGGCGATAAAATGCTTTTGATGC 60.061 43.478 0.00 4.60 34.19 3.91
6354 6517 4.104776 ACGGCGATAAAATGCTTTTGATG 58.895 39.130 16.62 0.00 34.19 3.07
6355 6518 4.096382 AGACGGCGATAAAATGCTTTTGAT 59.904 37.500 16.62 0.00 34.19 2.57
6356 6519 3.438781 AGACGGCGATAAAATGCTTTTGA 59.561 39.130 16.62 0.00 34.19 2.69
6357 6520 3.758300 AGACGGCGATAAAATGCTTTTG 58.242 40.909 16.62 0.00 34.19 2.44
6358 6521 5.554822 TTAGACGGCGATAAAATGCTTTT 57.445 34.783 16.62 0.00 36.67 2.27
6359 6522 5.751243 ATTAGACGGCGATAAAATGCTTT 57.249 34.783 16.62 0.00 0.00 3.51
6360 6523 5.751243 AATTAGACGGCGATAAAATGCTT 57.249 34.783 16.62 0.59 0.00 3.91
6361 6524 5.295787 TGAAATTAGACGGCGATAAAATGCT 59.704 36.000 16.62 0.00 0.00 3.79
6362 6525 5.507077 TGAAATTAGACGGCGATAAAATGC 58.493 37.500 16.62 5.53 0.00 3.56
6363 6526 6.943981 TCTGAAATTAGACGGCGATAAAATG 58.056 36.000 16.62 3.68 0.00 2.32
6364 6527 6.984474 TCTCTGAAATTAGACGGCGATAAAAT 59.016 34.615 16.62 4.78 0.00 1.82
6365 6528 6.255020 GTCTCTGAAATTAGACGGCGATAAAA 59.745 38.462 16.62 2.24 33.38 1.52
6366 6529 5.747197 GTCTCTGAAATTAGACGGCGATAAA 59.253 40.000 16.62 4.28 33.38 1.40
6367 6530 5.163591 TGTCTCTGAAATTAGACGGCGATAA 60.164 40.000 16.62 12.83 44.14 1.75
6368 6531 4.337274 TGTCTCTGAAATTAGACGGCGATA 59.663 41.667 16.62 2.71 44.14 2.92
6369 6532 3.130516 TGTCTCTGAAATTAGACGGCGAT 59.869 43.478 16.62 3.89 44.14 4.58
6370 6533 2.490509 TGTCTCTGAAATTAGACGGCGA 59.509 45.455 16.62 0.00 44.14 5.54
6371 6534 2.599082 GTGTCTCTGAAATTAGACGGCG 59.401 50.000 4.80 4.80 44.14 6.46
6372 6535 3.585862 TGTGTCTCTGAAATTAGACGGC 58.414 45.455 2.49 0.00 44.14 5.68
6373 6536 6.330278 TGTATGTGTCTCTGAAATTAGACGG 58.670 40.000 2.49 0.00 44.14 4.79
6374 6537 7.489435 ACATGTATGTGTCTCTGAAATTAGACG 59.511 37.037 0.00 0.00 44.14 4.18
6375 6538 8.709386 ACATGTATGTGTCTCTGAAATTAGAC 57.291 34.615 0.00 0.00 40.03 2.59
6376 6539 9.725019 AAACATGTATGTGTCTCTGAAATTAGA 57.275 29.630 0.00 0.00 41.61 2.10
6382 6545 9.283768 ACAATAAAACATGTATGTGTCTCTGAA 57.716 29.630 0.00 0.00 41.61 3.02
6383 6546 8.846943 ACAATAAAACATGTATGTGTCTCTGA 57.153 30.769 0.00 0.00 41.61 3.27
6384 6547 9.897744 AAACAATAAAACATGTATGTGTCTCTG 57.102 29.630 0.00 0.00 41.61 3.35
6451 6614 4.682050 GCAAAAAGCTCCCTAGGTCTCTAG 60.682 50.000 8.29 0.00 40.40 2.43
6452 6615 3.197983 GCAAAAAGCTCCCTAGGTCTCTA 59.802 47.826 8.29 0.00 41.15 2.43
6453 6616 2.026729 GCAAAAAGCTCCCTAGGTCTCT 60.027 50.000 8.29 0.00 41.15 3.10
6454 6617 2.360844 GCAAAAAGCTCCCTAGGTCTC 58.639 52.381 8.29 0.00 41.15 3.36
6455 6618 1.004862 GGCAAAAAGCTCCCTAGGTCT 59.995 52.381 8.29 0.00 44.79 3.85
6456 6619 1.271926 TGGCAAAAAGCTCCCTAGGTC 60.272 52.381 8.29 0.00 44.79 3.85
6457 6620 0.777446 TGGCAAAAAGCTCCCTAGGT 59.223 50.000 8.29 0.00 44.79 3.08
6458 6621 1.923356 TTGGCAAAAAGCTCCCTAGG 58.077 50.000 0.06 0.06 44.79 3.02
6459 6622 2.029020 GGTTTGGCAAAAAGCTCCCTAG 60.029 50.000 15.29 0.00 44.79 3.02
6460 6623 1.967779 GGTTTGGCAAAAAGCTCCCTA 59.032 47.619 15.29 0.00 44.79 3.53
6461 6624 0.758734 GGTTTGGCAAAAAGCTCCCT 59.241 50.000 15.29 0.00 44.79 4.20
6462 6625 0.250295 GGGTTTGGCAAAAAGCTCCC 60.250 55.000 15.29 16.25 44.79 4.30
6463 6626 0.758734 AGGGTTTGGCAAAAAGCTCC 59.241 50.000 15.29 10.94 44.79 4.70
6464 6627 2.158971 TGAAGGGTTTGGCAAAAAGCTC 60.159 45.455 15.29 9.85 44.79 4.09
6465 6628 1.836802 TGAAGGGTTTGGCAAAAAGCT 59.163 42.857 15.29 0.00 44.79 3.74
6466 6629 1.939934 GTGAAGGGTTTGGCAAAAAGC 59.060 47.619 15.29 3.17 44.65 3.51
6467 6630 2.159170 TCGTGAAGGGTTTGGCAAAAAG 60.159 45.455 15.29 0.43 0.00 2.27
6468 6631 1.825474 TCGTGAAGGGTTTGGCAAAAA 59.175 42.857 15.29 0.00 0.00 1.94
6469 6632 1.135333 GTCGTGAAGGGTTTGGCAAAA 59.865 47.619 15.29 0.00 0.00 2.44
6470 6633 0.741915 GTCGTGAAGGGTTTGGCAAA 59.258 50.000 8.93 8.93 0.00 3.68
6471 6634 0.394488 TGTCGTGAAGGGTTTGGCAA 60.394 50.000 0.00 0.00 0.00 4.52
6472 6635 0.179004 ATGTCGTGAAGGGTTTGGCA 60.179 50.000 0.00 0.00 0.00 4.92
6473 6636 0.521735 GATGTCGTGAAGGGTTTGGC 59.478 55.000 0.00 0.00 0.00 4.52
6474 6637 1.806542 CAGATGTCGTGAAGGGTTTGG 59.193 52.381 0.00 0.00 0.00 3.28
6475 6638 2.224079 CACAGATGTCGTGAAGGGTTTG 59.776 50.000 0.00 0.00 36.43 2.93
6476 6639 2.104111 TCACAGATGTCGTGAAGGGTTT 59.896 45.455 0.00 0.00 40.34 3.27
6477 6640 1.691976 TCACAGATGTCGTGAAGGGTT 59.308 47.619 0.00 0.00 40.34 4.11
6478 6641 1.000955 GTCACAGATGTCGTGAAGGGT 59.999 52.381 8.49 0.00 44.58 4.34
6479 6642 1.273606 AGTCACAGATGTCGTGAAGGG 59.726 52.381 8.49 0.00 44.58 3.95
6480 6643 2.288457 ACAGTCACAGATGTCGTGAAGG 60.288 50.000 8.49 7.12 44.58 3.46
6481 6644 2.728318 CACAGTCACAGATGTCGTGAAG 59.272 50.000 8.49 7.60 44.58 3.02
6482 6645 2.100749 ACACAGTCACAGATGTCGTGAA 59.899 45.455 8.49 0.00 44.58 3.18
6483 6646 1.681264 ACACAGTCACAGATGTCGTGA 59.319 47.619 0.00 0.00 41.00 4.35
6484 6647 1.788886 CACACAGTCACAGATGTCGTG 59.211 52.381 0.00 0.00 35.63 4.35
6485 6648 1.269778 CCACACAGTCACAGATGTCGT 60.270 52.381 0.00 0.00 0.00 4.34
6486 6649 1.422388 CCACACAGTCACAGATGTCG 58.578 55.000 0.00 0.00 0.00 4.35
6487 6650 1.070758 ACCCACACAGTCACAGATGTC 59.929 52.381 0.00 0.00 0.00 3.06
6488 6651 1.070758 GACCCACACAGTCACAGATGT 59.929 52.381 0.00 0.00 34.27 3.06
6489 6652 1.800805 GACCCACACAGTCACAGATG 58.199 55.000 0.00 0.00 34.27 2.90
6490 6653 0.318441 CGACCCACACAGTCACAGAT 59.682 55.000 0.00 0.00 33.70 2.90
6491 6654 1.739667 CGACCCACACAGTCACAGA 59.260 57.895 0.00 0.00 33.70 3.41
6492 6655 1.956170 GCGACCCACACAGTCACAG 60.956 63.158 0.00 0.00 33.70 3.66
6493 6656 1.110518 TAGCGACCCACACAGTCACA 61.111 55.000 0.00 0.00 33.70 3.58
6494 6657 0.388649 CTAGCGACCCACACAGTCAC 60.389 60.000 0.00 0.00 33.70 3.67
6495 6658 1.532604 CCTAGCGACCCACACAGTCA 61.533 60.000 0.00 0.00 33.70 3.41
6496 6659 1.215647 CCTAGCGACCCACACAGTC 59.784 63.158 0.00 0.00 0.00 3.51
6497 6660 2.283529 CCCTAGCGACCCACACAGT 61.284 63.158 0.00 0.00 0.00 3.55
6498 6661 2.579201 CCCTAGCGACCCACACAG 59.421 66.667 0.00 0.00 0.00 3.66
6499 6662 3.702048 GCCCTAGCGACCCACACA 61.702 66.667 0.00 0.00 0.00 3.72
6500 6663 3.372554 GAGCCCTAGCGACCCACAC 62.373 68.421 0.00 0.00 46.67 3.82
6501 6664 3.075005 GAGCCCTAGCGACCCACA 61.075 66.667 0.00 0.00 46.67 4.17
6502 6665 3.851128 GGAGCCCTAGCGACCCAC 61.851 72.222 0.00 0.00 46.67 4.61
6503 6666 3.618855 AAGGAGCCCTAGCGACCCA 62.619 63.158 0.00 0.00 46.67 4.51
6504 6667 2.764547 AAGGAGCCCTAGCGACCC 60.765 66.667 0.00 0.00 46.67 4.46
6505 6668 2.501610 CAAGGAGCCCTAGCGACC 59.498 66.667 0.00 0.00 46.67 4.79
6506 6669 2.202946 GCAAGGAGCCCTAGCGAC 60.203 66.667 0.00 0.00 46.67 5.19
6523 6686 2.149973 AATGCCCTAAGCCAGAAAGG 57.850 50.000 0.00 0.00 42.71 3.11
6524 6687 3.511146 TGAAAATGCCCTAAGCCAGAAAG 59.489 43.478 0.00 0.00 42.71 2.62
6525 6688 3.505386 TGAAAATGCCCTAAGCCAGAAA 58.495 40.909 0.00 0.00 42.71 2.52
6526 6689 3.168035 TGAAAATGCCCTAAGCCAGAA 57.832 42.857 0.00 0.00 42.71 3.02
6527 6690 2.825532 GTTGAAAATGCCCTAAGCCAGA 59.174 45.455 0.00 0.00 42.71 3.86
6528 6691 2.562298 TGTTGAAAATGCCCTAAGCCAG 59.438 45.455 0.00 0.00 42.71 4.85
6529 6692 2.562298 CTGTTGAAAATGCCCTAAGCCA 59.438 45.455 0.00 0.00 42.71 4.75
6530 6693 2.562738 ACTGTTGAAAATGCCCTAAGCC 59.437 45.455 0.00 0.00 42.71 4.35
6531 6694 3.942130 ACTGTTGAAAATGCCCTAAGC 57.058 42.857 0.00 0.00 44.14 3.09
6532 6695 4.142381 GGCTACTGTTGAAAATGCCCTAAG 60.142 45.833 0.00 0.00 33.45 2.18
6533 6696 3.761752 GGCTACTGTTGAAAATGCCCTAA 59.238 43.478 0.00 0.00 33.45 2.69
6534 6697 3.352648 GGCTACTGTTGAAAATGCCCTA 58.647 45.455 0.00 0.00 33.45 3.53
6535 6698 2.171003 GGCTACTGTTGAAAATGCCCT 58.829 47.619 0.00 0.00 33.45 5.19
6536 6699 2.654749 GGCTACTGTTGAAAATGCCC 57.345 50.000 0.00 0.00 33.45 5.36
6537 6700 2.171003 AGGGCTACTGTTGAAAATGCC 58.829 47.619 0.00 0.00 38.28 4.40
6538 6701 6.884280 ATATAGGGCTACTGTTGAAAATGC 57.116 37.500 0.00 0.00 0.00 3.56
6539 6702 7.502226 TCCAATATAGGGCTACTGTTGAAAATG 59.498 37.037 0.00 0.00 0.00 2.32
6540 6703 7.502561 GTCCAATATAGGGCTACTGTTGAAAAT 59.497 37.037 0.00 0.00 0.00 1.82
6541 6704 6.826741 GTCCAATATAGGGCTACTGTTGAAAA 59.173 38.462 0.00 0.00 0.00 2.29
6542 6705 6.069905 TGTCCAATATAGGGCTACTGTTGAAA 60.070 38.462 0.00 0.00 33.35 2.69
6543 6706 5.427157 TGTCCAATATAGGGCTACTGTTGAA 59.573 40.000 0.00 0.00 33.35 2.69
6544 6707 4.966168 TGTCCAATATAGGGCTACTGTTGA 59.034 41.667 0.00 0.00 33.35 3.18
6545 6708 5.057149 GTGTCCAATATAGGGCTACTGTTG 58.943 45.833 0.00 0.00 33.35 3.33
6546 6709 4.719773 TGTGTCCAATATAGGGCTACTGTT 59.280 41.667 0.00 0.00 33.35 3.16
6547 6710 4.101119 GTGTGTCCAATATAGGGCTACTGT 59.899 45.833 0.00 0.00 33.35 3.55
6548 6711 4.100963 TGTGTGTCCAATATAGGGCTACTG 59.899 45.833 0.00 0.00 33.35 2.74
6549 6712 4.295201 TGTGTGTCCAATATAGGGCTACT 58.705 43.478 0.00 0.00 33.35 2.57
6550 6713 4.682778 TGTGTGTCCAATATAGGGCTAC 57.317 45.455 0.00 0.00 33.35 3.58
6551 6714 5.702065 TTTGTGTGTCCAATATAGGGCTA 57.298 39.130 0.00 0.00 33.35 3.93
6552 6715 4.584638 TTTGTGTGTCCAATATAGGGCT 57.415 40.909 0.00 0.00 33.35 5.19
6553 6716 4.705023 ACTTTTGTGTGTCCAATATAGGGC 59.295 41.667 0.00 0.00 0.00 5.19
6554 6717 7.110155 ACTACTTTTGTGTGTCCAATATAGGG 58.890 38.462 0.00 0.00 0.00 3.53
6555 6718 8.561738 AACTACTTTTGTGTGTCCAATATAGG 57.438 34.615 0.00 0.00 0.00 2.57
6556 6719 8.665685 GGAACTACTTTTGTGTGTCCAATATAG 58.334 37.037 0.00 0.00 0.00 1.31
6557 6720 8.380099 AGGAACTACTTTTGTGTGTCCAATATA 58.620 33.333 0.00 0.00 36.02 0.86
6558 6721 7.231467 AGGAACTACTTTTGTGTGTCCAATAT 58.769 34.615 0.00 0.00 36.02 1.28
6559 6722 6.597562 AGGAACTACTTTTGTGTGTCCAATA 58.402 36.000 0.00 0.00 36.02 1.90
6560 6723 5.445964 AGGAACTACTTTTGTGTGTCCAAT 58.554 37.500 0.00 0.00 36.02 3.16
6561 6724 4.850680 AGGAACTACTTTTGTGTGTCCAA 58.149 39.130 0.00 0.00 36.02 3.53
6562 6725 4.448210 GAGGAACTACTTTTGTGTGTCCA 58.552 43.478 0.00 0.00 41.55 4.02
6563 6726 3.813724 GGAGGAACTACTTTTGTGTGTCC 59.186 47.826 0.00 0.00 41.55 4.02
6564 6727 3.493503 CGGAGGAACTACTTTTGTGTGTC 59.506 47.826 0.00 0.00 41.55 3.67
6565 6728 3.118519 ACGGAGGAACTACTTTTGTGTGT 60.119 43.478 0.00 0.00 41.55 3.72
6566 6729 3.463944 ACGGAGGAACTACTTTTGTGTG 58.536 45.455 0.00 0.00 41.55 3.82
6567 6730 3.832615 ACGGAGGAACTACTTTTGTGT 57.167 42.857 0.00 0.00 41.55 3.72
6568 6731 3.183775 CGAACGGAGGAACTACTTTTGTG 59.816 47.826 0.00 0.00 41.55 3.33
6569 6732 3.068590 TCGAACGGAGGAACTACTTTTGT 59.931 43.478 0.00 0.00 41.55 2.83
6570 6733 3.645884 TCGAACGGAGGAACTACTTTTG 58.354 45.455 0.00 0.00 41.55 2.44
6571 6734 4.326504 TTCGAACGGAGGAACTACTTTT 57.673 40.909 0.00 0.00 41.55 2.27
6572 6735 4.326504 TTTCGAACGGAGGAACTACTTT 57.673 40.909 0.00 0.00 41.55 2.66
6573 6736 4.532314 ATTTCGAACGGAGGAACTACTT 57.468 40.909 0.00 0.00 41.55 2.24
6574 6737 4.532314 AATTTCGAACGGAGGAACTACT 57.468 40.909 0.00 0.00 41.55 2.57
6575 6738 5.405797 AGTAATTTCGAACGGAGGAACTAC 58.594 41.667 0.00 0.00 41.55 2.73
6576 6739 5.649782 AGTAATTTCGAACGGAGGAACTA 57.350 39.130 0.00 0.00 41.55 2.24
6578 6741 4.450080 ACAAGTAATTTCGAACGGAGGAAC 59.550 41.667 0.00 0.00 0.00 3.62
6579 6742 4.634199 ACAAGTAATTTCGAACGGAGGAA 58.366 39.130 0.00 0.00 0.00 3.36
6580 6743 4.021719 AGACAAGTAATTTCGAACGGAGGA 60.022 41.667 0.00 0.00 0.00 3.71
6581 6744 4.243270 AGACAAGTAATTTCGAACGGAGG 58.757 43.478 0.00 0.00 0.00 4.30
6582 6745 4.030306 CGAGACAAGTAATTTCGAACGGAG 59.970 45.833 0.00 0.00 33.38 4.63
6583 6746 3.916172 CGAGACAAGTAATTTCGAACGGA 59.084 43.478 0.00 0.00 33.38 4.69
6584 6747 3.060363 CCGAGACAAGTAATTTCGAACGG 59.940 47.826 0.00 0.00 33.38 4.44
6585 6748 3.916172 TCCGAGACAAGTAATTTCGAACG 59.084 43.478 0.00 0.00 33.38 3.95
6586 6749 5.834239 TTCCGAGACAAGTAATTTCGAAC 57.166 39.130 0.00 0.00 33.38 3.95
6587 6750 6.647481 TCATTTCCGAGACAAGTAATTTCGAA 59.353 34.615 0.00 0.00 33.38 3.71
6588 6751 6.160684 TCATTTCCGAGACAAGTAATTTCGA 58.839 36.000 0.00 0.00 33.38 3.71
6589 6752 6.403333 TCATTTCCGAGACAAGTAATTTCG 57.597 37.500 0.00 0.00 0.00 3.46
6590 6753 8.237267 ACATTCATTTCCGAGACAAGTAATTTC 58.763 33.333 0.00 0.00 0.00 2.17
6591 6754 8.110860 ACATTCATTTCCGAGACAAGTAATTT 57.889 30.769 0.00 0.00 0.00 1.82
6592 6755 7.687941 ACATTCATTTCCGAGACAAGTAATT 57.312 32.000 0.00 0.00 0.00 1.40
6593 6756 8.964476 ATACATTCATTTCCGAGACAAGTAAT 57.036 30.769 0.00 0.00 0.00 1.89
6594 6757 8.258007 AGATACATTCATTTCCGAGACAAGTAA 58.742 33.333 0.00 0.00 0.00 2.24
6595 6758 7.782049 AGATACATTCATTTCCGAGACAAGTA 58.218 34.615 0.00 0.00 0.00 2.24
6596 6759 6.644347 AGATACATTCATTTCCGAGACAAGT 58.356 36.000 0.00 0.00 0.00 3.16
6597 6760 8.648557 TTAGATACATTCATTTCCGAGACAAG 57.351 34.615 0.00 0.00 0.00 3.16
6598 6761 9.443323 TTTTAGATACATTCATTTCCGAGACAA 57.557 29.630 0.00 0.00 0.00 3.18
6599 6762 8.879759 GTTTTAGATACATTCATTTCCGAGACA 58.120 33.333 0.00 0.00 0.00 3.41
6600 6763 9.099454 AGTTTTAGATACATTCATTTCCGAGAC 57.901 33.333 0.00 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.