Multiple sequence alignment - TraesCS3B01G127100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G127100 chr3B 100.000 3624 0 0 1 3624 104969505 104973128 0.000000e+00 6693
1 TraesCS3B01G127100 chr3B 98.871 443 5 0 3182 3624 540442967 540442525 0.000000e+00 791
2 TraesCS3B01G127100 chr3D 90.540 3076 130 56 10 3003 63778054 63781050 0.000000e+00 3919
3 TraesCS3B01G127100 chr3A 87.805 3157 165 75 3 3052 73511546 73514589 0.000000e+00 3494
4 TraesCS3B01G127100 chr4B 98.661 448 5 1 3177 3624 661635434 661635880 0.000000e+00 793
5 TraesCS3B01G127100 chr2B 98.874 444 5 0 3181 3624 188823794 188824237 0.000000e+00 793
6 TraesCS3B01G127100 chr2A 98.874 444 5 0 3181 3624 456651269 456650826 0.000000e+00 793
7 TraesCS3B01G127100 chr5B 98.655 446 6 0 3179 3624 490224523 490224968 0.000000e+00 791
8 TraesCS3B01G127100 chr4A 98.871 443 5 0 3182 3624 16029670 16029228 0.000000e+00 791
9 TraesCS3B01G127100 chr4A 98.871 443 5 0 3182 3624 336016354 336015912 0.000000e+00 791
10 TraesCS3B01G127100 chr6B 98.222 450 7 1 3176 3624 22703586 22704035 0.000000e+00 785
11 TraesCS3B01G127100 chr5A 97.802 455 10 0 3170 3624 317523553 317523099 0.000000e+00 785
12 TraesCS3B01G127100 chr1A 76.573 747 122 40 970 1704 140960989 140961694 9.570000e-96 361
13 TraesCS3B01G127100 chr1A 77.452 683 92 33 1929 2574 140961884 140962541 5.760000e-93 351
14 TraesCS3B01G127100 chr1A 86.364 132 16 2 1539 1669 531282228 531282098 3.770000e-30 143
15 TraesCS3B01G127100 chr1D 77.679 672 88 33 1930 2564 126473853 126474499 1.600000e-93 353
16 TraesCS3B01G127100 chr1D 86.905 168 19 3 1539 1704 126473497 126473663 6.180000e-43 185
17 TraesCS3B01G127100 chr1D 86.364 132 16 2 1539 1669 432808564 432808434 3.770000e-30 143
18 TraesCS3B01G127100 chr1B 77.415 673 90 35 1929 2564 190631309 190631956 9.630000e-91 344
19 TraesCS3B01G127100 chr6A 91.045 134 10 2 2160 2292 485155766 485155634 2.870000e-41 180
20 TraesCS3B01G127100 chr7B 84.615 117 16 2 1552 1667 408567872 408567987 8.220000e-22 115
21 TraesCS3B01G127100 chr7A 83.761 117 17 2 1552 1667 457569559 457569674 3.830000e-20 110
22 TraesCS3B01G127100 chrUn 82.906 117 18 2 1552 1667 92481505 92481390 1.780000e-18 104


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G127100 chr3B 104969505 104973128 3623 False 6693 6693 100.0000 1 3624 1 chr3B.!!$F1 3623
1 TraesCS3B01G127100 chr3D 63778054 63781050 2996 False 3919 3919 90.5400 10 3003 1 chr3D.!!$F1 2993
2 TraesCS3B01G127100 chr3A 73511546 73514589 3043 False 3494 3494 87.8050 3 3052 1 chr3A.!!$F1 3049
3 TraesCS3B01G127100 chr1A 140960989 140962541 1552 False 356 361 77.0125 970 2574 2 chr1A.!!$F1 1604
4 TraesCS3B01G127100 chr1D 126473497 126474499 1002 False 269 353 82.2920 1539 2564 2 chr1D.!!$F1 1025
5 TraesCS3B01G127100 chr1B 190631309 190631956 647 False 344 344 77.4150 1929 2564 1 chr1B.!!$F1 635

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
182 203 0.108520 CCTTTGACACATGCATGGCC 60.109 55.0 29.41 17.69 0.00 5.36 F
907 1015 0.108585 TCTTTCAGTGCACCTCACCC 59.891 55.0 14.63 0.00 46.81 4.61 F
908 1016 0.109342 CTTTCAGTGCACCTCACCCT 59.891 55.0 14.63 0.00 46.81 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1047 1155 0.034670 CCTTCCCCTGCTCCTTCTTG 60.035 60.000 0.0 0.0 0.00 3.02 R
2617 2834 1.000955 AGACCGTCAGTTCATCACCAC 59.999 52.381 0.4 0.0 0.00 4.16 R
2759 2984 1.523758 CCACAGCCACAGAGGTTAAC 58.476 55.000 0.0 0.0 40.61 2.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.786901 TACGTTGACGGCGGTGCAA 62.787 57.895 13.24 9.95 44.95 4.08
37 45 3.200593 GCGAGTACGAGGGAGCGA 61.201 66.667 0.00 0.00 42.66 4.93
151 172 1.064952 CCTTTGCGTTTTTCACCGTCT 59.935 47.619 0.00 0.00 0.00 4.18
182 203 0.108520 CCTTTGACACATGCATGGCC 60.109 55.000 29.41 17.69 0.00 5.36
225 247 0.319211 CTACCCGAAACTGCGTCACA 60.319 55.000 0.00 0.00 0.00 3.58
252 276 3.108289 CATATCGCAGCCCGCTCG 61.108 66.667 0.00 0.00 39.08 5.03
304 329 2.437625 GCCGGGCCACTAGATAGAA 58.562 57.895 8.12 0.00 0.00 2.10
312 337 5.220854 CGGGCCACTAGATAGAATTTGTTTG 60.221 44.000 4.39 0.00 0.00 2.93
407 459 7.209471 GCAGATGCAGATTAGTACTACTACT 57.791 40.000 0.91 0.00 41.59 2.57
408 460 8.325421 GCAGATGCAGATTAGTACTACTACTA 57.675 38.462 0.91 0.00 41.59 1.82
409 461 8.231837 GCAGATGCAGATTAGTACTACTACTAC 58.768 40.741 0.91 0.00 41.59 2.73
437 489 2.407268 CTGACCACACAGCTTTGCA 58.593 52.632 0.00 0.00 0.00 4.08
438 490 0.309922 CTGACCACACAGCTTTGCAG 59.690 55.000 0.00 0.00 0.00 4.41
439 491 0.394216 TGACCACACAGCTTTGCAGT 60.394 50.000 0.00 0.00 0.00 4.40
440 492 0.740737 GACCACACAGCTTTGCAGTT 59.259 50.000 0.00 0.00 0.00 3.16
441 493 0.457035 ACCACACAGCTTTGCAGTTG 59.543 50.000 0.00 0.00 37.27 3.16
442 494 0.872881 CCACACAGCTTTGCAGTTGC 60.873 55.000 0.00 0.00 34.63 4.17
535 610 4.778415 TCGAACGCCGAGCTCAGC 62.778 66.667 15.40 13.71 43.23 4.26
536 611 4.785512 CGAACGCCGAGCTCAGCT 62.786 66.667 19.34 0.00 43.88 4.24
725 816 4.612259 GCATGCGAGCATTAATGAGTAAGG 60.612 45.833 19.73 3.24 33.90 2.69
861 969 3.282885 CCTCTCTTATTCAAACCTGCCC 58.717 50.000 0.00 0.00 0.00 5.36
892 1000 0.610687 CTCACGCCTCCTTCCTCTTT 59.389 55.000 0.00 0.00 0.00 2.52
901 1009 1.072331 TCCTTCCTCTTTCAGTGCACC 59.928 52.381 14.63 0.00 0.00 5.01
906 1014 1.517242 CTCTTTCAGTGCACCTCACC 58.483 55.000 14.63 0.00 46.81 4.02
907 1015 0.108585 TCTTTCAGTGCACCTCACCC 59.891 55.000 14.63 0.00 46.81 4.61
908 1016 0.109342 CTTTCAGTGCACCTCACCCT 59.891 55.000 14.63 0.00 46.81 4.34
909 1017 0.179020 TTTCAGTGCACCTCACCCTG 60.179 55.000 14.63 3.17 46.81 4.45
910 1018 2.670934 CAGTGCACCTCACCCTGC 60.671 66.667 14.63 0.00 46.81 4.85
911 1019 3.958860 AGTGCACCTCACCCTGCC 61.959 66.667 14.63 0.00 46.81 4.85
915 1023 3.721706 CACCTCACCCTGCCCCTC 61.722 72.222 0.00 0.00 0.00 4.30
916 1024 3.947041 ACCTCACCCTGCCCCTCT 61.947 66.667 0.00 0.00 0.00 3.69
940 1048 1.270826 CACGCCTCAGTCTTCTTGAGA 59.729 52.381 3.94 0.00 31.79 3.27
941 1049 1.543802 ACGCCTCAGTCTTCTTGAGAG 59.456 52.381 3.94 1.18 34.31 3.20
942 1050 1.735369 CGCCTCAGTCTTCTTGAGAGC 60.735 57.143 3.94 5.13 34.31 4.09
943 1051 1.405391 GCCTCAGTCTTCTTGAGAGCC 60.405 57.143 3.94 0.00 34.31 4.70
944 1052 1.898472 CCTCAGTCTTCTTGAGAGCCA 59.102 52.381 3.94 0.00 34.31 4.75
945 1053 2.353605 CCTCAGTCTTCTTGAGAGCCAC 60.354 54.545 3.94 0.00 34.31 5.01
1143 1257 4.631740 TCCACCAGGGACTCGGCA 62.632 66.667 0.00 0.00 42.15 5.69
1248 1371 2.150837 GTACAACGAGACCGAGCGC 61.151 63.158 0.00 0.00 39.50 5.92
1461 1584 1.066143 CGTGGCTTCCTGGTGAGTAAT 60.066 52.381 0.00 0.00 0.00 1.89
1467 1590 4.336280 GCTTCCTGGTGAGTAATTTCCTT 58.664 43.478 0.00 0.00 0.00 3.36
1473 1596 5.880887 CCTGGTGAGTAATTTCCTTCCTAAC 59.119 44.000 0.00 0.00 0.00 2.34
1475 1598 6.472887 TGGTGAGTAATTTCCTTCCTAACAG 58.527 40.000 0.00 0.00 0.00 3.16
1478 1608 4.514401 AGTAATTTCCTTCCTAACAGCGG 58.486 43.478 0.00 0.00 0.00 5.52
1513 1643 2.159693 GCAGGTTTAAGCGCTGAGTAAC 60.160 50.000 12.58 12.79 0.00 2.50
1515 1645 2.038033 AGGTTTAAGCGCTGAGTAACCA 59.962 45.455 29.17 6.76 37.95 3.67
1863 2035 1.206371 AGCTAGCCGACCGTAACAAAT 59.794 47.619 12.13 0.00 0.00 2.32
1940 2112 3.735037 GATTCCCGGAGCGACCACC 62.735 68.421 0.73 0.00 38.90 4.61
2002 2174 4.450122 TCGTCGTCGTGCTACGGC 62.450 66.667 1.33 6.12 43.73 5.68
2678 2902 8.740369 CGTGAAGTACAATTAATTACTACCTCG 58.260 37.037 0.00 6.85 0.00 4.63
2679 2903 9.028185 GTGAAGTACAATTAATTACTACCTCGG 57.972 37.037 0.00 0.00 0.00 4.63
2759 2984 4.634000 TGTTTCTTTGTTTATCGATCGCG 58.366 39.130 11.09 0.00 39.35 5.87
2764 2989 5.778134 TCTTTGTTTATCGATCGCGTTAAC 58.222 37.500 11.09 11.86 38.98 2.01
2765 2990 4.503767 TTGTTTATCGATCGCGTTAACC 57.496 40.909 11.09 1.99 38.98 2.85
2766 2991 3.772932 TGTTTATCGATCGCGTTAACCT 58.227 40.909 11.09 0.00 38.98 3.50
2767 2992 3.792956 TGTTTATCGATCGCGTTAACCTC 59.207 43.478 11.09 3.31 38.98 3.85
2768 2993 3.976793 TTATCGATCGCGTTAACCTCT 57.023 42.857 11.09 0.00 38.98 3.69
2769 2994 2.121116 ATCGATCGCGTTAACCTCTG 57.879 50.000 11.09 0.00 38.98 3.35
2771 2996 0.914551 CGATCGCGTTAACCTCTGTG 59.085 55.000 5.77 0.00 0.00 3.66
2772 2997 1.278238 GATCGCGTTAACCTCTGTGG 58.722 55.000 5.77 0.00 42.93 4.17
2773 2998 0.739813 ATCGCGTTAACCTCTGTGGC 60.740 55.000 5.77 0.00 40.22 5.01
2775 3000 1.626654 CGCGTTAACCTCTGTGGCTG 61.627 60.000 0.00 0.00 40.22 4.85
2776 3001 0.602905 GCGTTAACCTCTGTGGCTGT 60.603 55.000 0.00 0.00 40.22 4.40
2777 3002 1.148310 CGTTAACCTCTGTGGCTGTG 58.852 55.000 0.00 0.00 40.22 3.66
2876 3102 3.057548 TGCGTGCATGGGAAGCTG 61.058 61.111 8.27 0.00 0.00 4.24
2886 3112 3.212685 CATGGGAAGCTGAAGGAAGATC 58.787 50.000 0.00 0.00 0.00 2.75
2897 3123 7.120051 AGCTGAAGGAAGATCTTAGTACTGTA 58.880 38.462 8.25 0.00 0.00 2.74
2898 3124 7.284489 AGCTGAAGGAAGATCTTAGTACTGTAG 59.716 40.741 8.25 3.04 0.00 2.74
2900 3126 8.282455 TGAAGGAAGATCTTAGTACTGTAGTG 57.718 38.462 8.25 0.00 0.00 2.74
2918 3144 7.987458 ACTGTAGTGAAGTTTCAGAATTCAGAA 59.013 33.333 9.04 9.04 37.98 3.02
2932 3158 6.820656 CAGAATTCAGAATTAGCAGTACACCT 59.179 38.462 8.45 0.00 0.00 4.00
2953 3185 5.241728 ACCTGCTTGAAAGTACATCCTTTTC 59.758 40.000 0.00 0.00 34.87 2.29
2955 3187 6.655003 CCTGCTTGAAAGTACATCCTTTTCTA 59.345 38.462 0.00 0.00 34.87 2.10
2956 3188 7.148340 CCTGCTTGAAAGTACATCCTTTTCTAG 60.148 40.741 9.87 9.87 37.01 2.43
2957 3189 6.547283 GCTTGAAAGTACATCCTTTTCTAGC 58.453 40.000 18.01 18.01 45.15 3.42
2958 3190 6.372937 GCTTGAAAGTACATCCTTTTCTAGCT 59.627 38.462 22.02 0.00 46.39 3.32
2960 3192 6.407202 TGAAAGTACATCCTTTTCTAGCTCC 58.593 40.000 0.00 0.00 34.87 4.70
2961 3193 6.213600 TGAAAGTACATCCTTTTCTAGCTCCT 59.786 38.462 0.00 0.00 34.87 3.69
2962 3194 7.399191 TGAAAGTACATCCTTTTCTAGCTCCTA 59.601 37.037 0.00 0.00 34.87 2.94
2963 3195 6.718522 AGTACATCCTTTTCTAGCTCCTAC 57.281 41.667 0.00 0.00 0.00 3.18
2964 3196 6.436890 AGTACATCCTTTTCTAGCTCCTACT 58.563 40.000 0.00 0.00 0.00 2.57
2965 3197 7.584532 AGTACATCCTTTTCTAGCTCCTACTA 58.415 38.462 0.00 0.00 0.00 1.82
2966 3198 6.969993 ACATCCTTTTCTAGCTCCTACTAG 57.030 41.667 0.00 0.00 40.92 2.57
2967 3199 6.436890 ACATCCTTTTCTAGCTCCTACTAGT 58.563 40.000 0.00 0.00 40.50 2.57
2968 3200 7.584532 ACATCCTTTTCTAGCTCCTACTAGTA 58.415 38.462 1.89 1.89 40.50 1.82
2988 3220 8.041323 ACTAGTACTATCAATTCAACCAAGTGG 58.959 37.037 2.33 0.00 42.17 4.00
3023 3255 3.046283 AGTGATACCACCATCAGGCTA 57.954 47.619 0.00 0.00 44.22 3.93
3032 3264 2.821969 CACCATCAGGCTAGCAAAACTT 59.178 45.455 18.24 0.00 39.06 2.66
3038 3270 6.350445 CCATCAGGCTAGCAAAACTTTAACAT 60.350 38.462 18.24 0.00 0.00 2.71
3041 3273 3.926527 GGCTAGCAAAACTTTAACATGCC 59.073 43.478 18.24 0.00 37.73 4.40
3052 3284 2.552599 TAACATGCCCAACGAGACAA 57.447 45.000 0.00 0.00 0.00 3.18
3053 3285 1.238439 AACATGCCCAACGAGACAAG 58.762 50.000 0.00 0.00 0.00 3.16
3054 3286 0.396435 ACATGCCCAACGAGACAAGA 59.604 50.000 0.00 0.00 0.00 3.02
3055 3287 1.081892 CATGCCCAACGAGACAAGAG 58.918 55.000 0.00 0.00 0.00 2.85
3056 3288 0.976641 ATGCCCAACGAGACAAGAGA 59.023 50.000 0.00 0.00 0.00 3.10
3057 3289 0.756294 TGCCCAACGAGACAAGAGAA 59.244 50.000 0.00 0.00 0.00 2.87
3058 3290 1.347707 TGCCCAACGAGACAAGAGAAT 59.652 47.619 0.00 0.00 0.00 2.40
3059 3291 2.565391 TGCCCAACGAGACAAGAGAATA 59.435 45.455 0.00 0.00 0.00 1.75
3060 3292 2.930682 GCCCAACGAGACAAGAGAATAC 59.069 50.000 0.00 0.00 0.00 1.89
3061 3293 3.368531 GCCCAACGAGACAAGAGAATACT 60.369 47.826 0.00 0.00 0.00 2.12
3062 3294 4.142227 GCCCAACGAGACAAGAGAATACTA 60.142 45.833 0.00 0.00 0.00 1.82
3063 3295 5.623824 GCCCAACGAGACAAGAGAATACTAA 60.624 44.000 0.00 0.00 0.00 2.24
3064 3296 6.574350 CCCAACGAGACAAGAGAATACTAAT 58.426 40.000 0.00 0.00 0.00 1.73
3065 3297 6.477033 CCCAACGAGACAAGAGAATACTAATG 59.523 42.308 0.00 0.00 0.00 1.90
3066 3298 7.258441 CCAACGAGACAAGAGAATACTAATGA 58.742 38.462 0.00 0.00 0.00 2.57
3067 3299 7.923344 CCAACGAGACAAGAGAATACTAATGAT 59.077 37.037 0.00 0.00 0.00 2.45
3068 3300 9.952188 CAACGAGACAAGAGAATACTAATGATA 57.048 33.333 0.00 0.00 0.00 2.15
3069 3301 9.953697 AACGAGACAAGAGAATACTAATGATAC 57.046 33.333 0.00 0.00 0.00 2.24
3070 3302 9.121658 ACGAGACAAGAGAATACTAATGATACA 57.878 33.333 0.00 0.00 0.00 2.29
3071 3303 9.605955 CGAGACAAGAGAATACTAATGATACAG 57.394 37.037 0.00 0.00 0.00 2.74
3085 3317 9.884636 ACTAATGATACAGTACAAAATGCTACA 57.115 29.630 0.00 0.00 0.00 2.74
3087 3319 8.792830 AATGATACAGTACAAAATGCTACACT 57.207 30.769 0.00 0.00 0.00 3.55
3088 3320 9.884636 AATGATACAGTACAAAATGCTACACTA 57.115 29.630 0.00 0.00 0.00 2.74
3089 3321 9.884636 ATGATACAGTACAAAATGCTACACTAA 57.115 29.630 0.00 0.00 0.00 2.24
3090 3322 9.884636 TGATACAGTACAAAATGCTACACTAAT 57.115 29.630 0.00 0.00 0.00 1.73
3092 3324 7.377766 ACAGTACAAAATGCTACACTAATGG 57.622 36.000 0.00 0.00 0.00 3.16
3093 3325 6.374333 ACAGTACAAAATGCTACACTAATGGG 59.626 38.462 0.00 0.00 0.00 4.00
3094 3326 4.718940 ACAAAATGCTACACTAATGGGC 57.281 40.909 0.00 0.00 0.00 5.36
3095 3327 3.447229 ACAAAATGCTACACTAATGGGCC 59.553 43.478 0.00 0.00 0.00 5.80
3096 3328 3.669939 AAATGCTACACTAATGGGCCT 57.330 42.857 4.53 0.00 0.00 5.19
3097 3329 2.938956 ATGCTACACTAATGGGCCTC 57.061 50.000 4.53 0.00 0.00 4.70
3098 3330 1.578897 TGCTACACTAATGGGCCTCA 58.421 50.000 4.53 0.00 0.00 3.86
3099 3331 2.126882 TGCTACACTAATGGGCCTCAT 58.873 47.619 4.53 1.07 37.79 2.90
3100 3332 3.313791 TGCTACACTAATGGGCCTCATA 58.686 45.455 4.53 0.00 34.44 2.15
3101 3333 3.324846 TGCTACACTAATGGGCCTCATAG 59.675 47.826 4.53 7.16 34.44 2.23
3102 3334 2.938956 ACACTAATGGGCCTCATAGC 57.061 50.000 4.53 0.00 34.44 2.97
3103 3335 2.126882 ACACTAATGGGCCTCATAGCA 58.873 47.619 4.53 0.00 34.44 3.49
3104 3336 2.713167 ACACTAATGGGCCTCATAGCAT 59.287 45.455 4.53 0.00 34.44 3.79
3105 3337 3.244700 ACACTAATGGGCCTCATAGCATC 60.245 47.826 4.53 0.00 34.44 3.91
3106 3338 3.008813 CACTAATGGGCCTCATAGCATCT 59.991 47.826 4.53 0.00 34.44 2.90
3107 3339 3.654806 ACTAATGGGCCTCATAGCATCTT 59.345 43.478 4.53 0.00 34.44 2.40
3108 3340 2.875094 ATGGGCCTCATAGCATCTTC 57.125 50.000 4.53 0.00 33.61 2.87
3109 3341 1.510492 TGGGCCTCATAGCATCTTCA 58.490 50.000 4.53 0.00 0.00 3.02
3110 3342 1.845791 TGGGCCTCATAGCATCTTCAA 59.154 47.619 4.53 0.00 0.00 2.69
3111 3343 2.444388 TGGGCCTCATAGCATCTTCAAT 59.556 45.455 4.53 0.00 0.00 2.57
3112 3344 3.080319 GGGCCTCATAGCATCTTCAATC 58.920 50.000 0.84 0.00 0.00 2.67
3113 3345 2.740981 GGCCTCATAGCATCTTCAATCG 59.259 50.000 0.00 0.00 0.00 3.34
3114 3346 2.740981 GCCTCATAGCATCTTCAATCGG 59.259 50.000 0.00 0.00 0.00 4.18
3115 3347 3.805108 GCCTCATAGCATCTTCAATCGGT 60.805 47.826 0.00 0.00 0.00 4.69
3116 3348 3.993081 CCTCATAGCATCTTCAATCGGTC 59.007 47.826 0.00 0.00 0.00 4.79
3117 3349 4.502087 CCTCATAGCATCTTCAATCGGTCA 60.502 45.833 0.00 0.00 0.00 4.02
3118 3350 5.219343 TCATAGCATCTTCAATCGGTCAT 57.781 39.130 0.00 0.00 0.00 3.06
3119 3351 6.345096 TCATAGCATCTTCAATCGGTCATA 57.655 37.500 0.00 0.00 0.00 2.15
3120 3352 6.393171 TCATAGCATCTTCAATCGGTCATAG 58.607 40.000 0.00 0.00 0.00 2.23
3121 3353 4.944619 AGCATCTTCAATCGGTCATAGA 57.055 40.909 0.00 0.00 0.00 1.98
3122 3354 5.282055 AGCATCTTCAATCGGTCATAGAA 57.718 39.130 0.00 0.00 0.00 2.10
3123 3355 5.674525 AGCATCTTCAATCGGTCATAGAAA 58.325 37.500 0.00 0.00 0.00 2.52
3124 3356 6.115446 AGCATCTTCAATCGGTCATAGAAAA 58.885 36.000 0.00 0.00 0.00 2.29
3125 3357 6.769822 AGCATCTTCAATCGGTCATAGAAAAT 59.230 34.615 0.00 0.00 0.00 1.82
3126 3358 7.284034 AGCATCTTCAATCGGTCATAGAAAATT 59.716 33.333 0.00 0.00 0.00 1.82
3127 3359 7.917505 GCATCTTCAATCGGTCATAGAAAATTT 59.082 33.333 0.00 0.00 0.00 1.82
3128 3360 9.229784 CATCTTCAATCGGTCATAGAAAATTTG 57.770 33.333 0.00 0.00 0.00 2.32
3129 3361 7.761409 TCTTCAATCGGTCATAGAAAATTTGG 58.239 34.615 0.00 0.00 0.00 3.28
3130 3362 5.890334 TCAATCGGTCATAGAAAATTTGGC 58.110 37.500 0.00 0.00 0.00 4.52
3131 3363 4.918810 ATCGGTCATAGAAAATTTGGCC 57.081 40.909 0.00 0.00 0.00 5.36
3132 3364 3.020984 TCGGTCATAGAAAATTTGGCCC 58.979 45.455 0.00 0.00 31.27 5.80
3133 3365 2.100749 CGGTCATAGAAAATTTGGCCCC 59.899 50.000 0.00 0.00 31.27 5.80
3134 3366 3.374764 GGTCATAGAAAATTTGGCCCCT 58.625 45.455 0.00 0.00 0.00 4.79
3135 3367 3.774766 GGTCATAGAAAATTTGGCCCCTT 59.225 43.478 0.00 0.00 0.00 3.95
3136 3368 4.959839 GGTCATAGAAAATTTGGCCCCTTA 59.040 41.667 0.00 0.00 0.00 2.69
3137 3369 5.602561 GGTCATAGAAAATTTGGCCCCTTAT 59.397 40.000 0.00 0.00 0.00 1.73
3138 3370 6.780522 GGTCATAGAAAATTTGGCCCCTTATA 59.219 38.462 0.00 0.00 0.00 0.98
3139 3371 7.255836 GGTCATAGAAAATTTGGCCCCTTATAC 60.256 40.741 0.00 0.00 0.00 1.47
3140 3372 7.286775 GTCATAGAAAATTTGGCCCCTTATACA 59.713 37.037 0.00 0.00 0.00 2.29
3141 3373 8.010105 TCATAGAAAATTTGGCCCCTTATACAT 58.990 33.333 0.00 0.00 0.00 2.29
3142 3374 6.731292 AGAAAATTTGGCCCCTTATACATC 57.269 37.500 0.00 0.00 0.00 3.06
3143 3375 5.602561 AGAAAATTTGGCCCCTTATACATCC 59.397 40.000 0.00 0.00 0.00 3.51
3144 3376 2.649531 TTTGGCCCCTTATACATCCG 57.350 50.000 0.00 0.00 0.00 4.18
3145 3377 0.109723 TTGGCCCCTTATACATCCGC 59.890 55.000 0.00 0.00 0.00 5.54
3146 3378 1.375523 GGCCCCTTATACATCCGCG 60.376 63.158 0.00 0.00 0.00 6.46
3147 3379 1.375523 GCCCCTTATACATCCGCGG 60.376 63.158 22.12 22.12 0.00 6.46
3148 3380 1.823169 GCCCCTTATACATCCGCGGA 61.823 60.000 33.12 33.12 0.00 5.54
3149 3381 0.037605 CCCCTTATACATCCGCGGAC 60.038 60.000 33.75 0.00 0.00 4.79
3150 3382 0.677288 CCCTTATACATCCGCGGACA 59.323 55.000 33.75 19.46 0.00 4.02
3151 3383 1.069513 CCCTTATACATCCGCGGACAA 59.930 52.381 33.75 19.41 0.00 3.18
3152 3384 2.289444 CCCTTATACATCCGCGGACAAT 60.289 50.000 33.75 24.73 0.00 2.71
3153 3385 2.736721 CCTTATACATCCGCGGACAATG 59.263 50.000 33.75 27.17 0.00 2.82
3154 3386 1.790755 TATACATCCGCGGACAATGC 58.209 50.000 33.75 0.00 0.00 3.56
3155 3387 0.106708 ATACATCCGCGGACAATGCT 59.893 50.000 33.75 17.02 0.00 3.79
3156 3388 0.529773 TACATCCGCGGACAATGCTC 60.530 55.000 33.75 0.00 0.00 4.26
3157 3389 1.815003 CATCCGCGGACAATGCTCA 60.815 57.895 33.75 4.52 0.00 4.26
3158 3390 1.815421 ATCCGCGGACAATGCTCAC 60.815 57.895 33.75 0.00 0.00 3.51
3159 3391 2.244117 ATCCGCGGACAATGCTCACT 62.244 55.000 33.75 7.50 0.00 3.41
3160 3392 2.456119 CCGCGGACAATGCTCACTC 61.456 63.158 24.07 0.00 0.00 3.51
3161 3393 1.737735 CGCGGACAATGCTCACTCA 60.738 57.895 0.00 0.00 0.00 3.41
3162 3394 1.790387 GCGGACAATGCTCACTCAC 59.210 57.895 0.00 0.00 0.00 3.51
3163 3395 0.950555 GCGGACAATGCTCACTCACA 60.951 55.000 0.00 0.00 0.00 3.58
3164 3396 0.792640 CGGACAATGCTCACTCACAC 59.207 55.000 0.00 0.00 0.00 3.82
3165 3397 1.160137 GGACAATGCTCACTCACACC 58.840 55.000 0.00 0.00 0.00 4.16
3166 3398 1.271054 GGACAATGCTCACTCACACCT 60.271 52.381 0.00 0.00 0.00 4.00
3167 3399 2.498167 GACAATGCTCACTCACACCTT 58.502 47.619 0.00 0.00 0.00 3.50
3168 3400 3.557054 GGACAATGCTCACTCACACCTTA 60.557 47.826 0.00 0.00 0.00 2.69
3169 3401 4.256920 GACAATGCTCACTCACACCTTAT 58.743 43.478 0.00 0.00 0.00 1.73
3170 3402 4.655963 ACAATGCTCACTCACACCTTATT 58.344 39.130 0.00 0.00 0.00 1.40
3171 3403 5.072741 ACAATGCTCACTCACACCTTATTT 58.927 37.500 0.00 0.00 0.00 1.40
3172 3404 5.048504 ACAATGCTCACTCACACCTTATTTG 60.049 40.000 0.00 0.00 0.00 2.32
3173 3405 4.085357 TGCTCACTCACACCTTATTTGT 57.915 40.909 0.00 0.00 0.00 2.83
3174 3406 4.065088 TGCTCACTCACACCTTATTTGTC 58.935 43.478 0.00 0.00 0.00 3.18
3175 3407 3.437049 GCTCACTCACACCTTATTTGTCC 59.563 47.826 0.00 0.00 0.00 4.02
3176 3408 3.659786 TCACTCACACCTTATTTGTCCG 58.340 45.455 0.00 0.00 0.00 4.79
3177 3409 3.070446 TCACTCACACCTTATTTGTCCGT 59.930 43.478 0.00 0.00 0.00 4.69
3178 3410 3.432252 CACTCACACCTTATTTGTCCGTC 59.568 47.826 0.00 0.00 0.00 4.79
3179 3411 3.323979 ACTCACACCTTATTTGTCCGTCT 59.676 43.478 0.00 0.00 0.00 4.18
3180 3412 3.921677 TCACACCTTATTTGTCCGTCTC 58.078 45.455 0.00 0.00 0.00 3.36
3181 3413 3.576982 TCACACCTTATTTGTCCGTCTCT 59.423 43.478 0.00 0.00 0.00 3.10
3182 3414 3.679980 CACACCTTATTTGTCCGTCTCTG 59.320 47.826 0.00 0.00 0.00 3.35
3183 3415 3.323979 ACACCTTATTTGTCCGTCTCTGT 59.676 43.478 0.00 0.00 0.00 3.41
3184 3416 4.202326 ACACCTTATTTGTCCGTCTCTGTT 60.202 41.667 0.00 0.00 0.00 3.16
3185 3417 5.011329 ACACCTTATTTGTCCGTCTCTGTTA 59.989 40.000 0.00 0.00 0.00 2.41
3186 3418 5.577164 CACCTTATTTGTCCGTCTCTGTTAG 59.423 44.000 0.00 0.00 0.00 2.34
3187 3419 5.479375 ACCTTATTTGTCCGTCTCTGTTAGA 59.521 40.000 0.00 0.00 0.00 2.10
3203 3435 9.278978 TCTCTGTTAGACTATGTATAGCTTCTG 57.721 37.037 0.00 1.57 33.68 3.02
3204 3436 8.982091 TCTGTTAGACTATGTATAGCTTCTGT 57.018 34.615 0.00 0.00 33.68 3.41
3207 3439 9.064706 TGTTAGACTATGTATAGCTTCTGTACC 57.935 37.037 0.00 0.00 33.68 3.34
3208 3440 9.287373 GTTAGACTATGTATAGCTTCTGTACCT 57.713 37.037 0.00 0.00 33.68 3.08
3211 3443 9.456147 AGACTATGTATAGCTTCTGTACCTATG 57.544 37.037 0.00 0.00 33.68 2.23
3212 3444 9.233649 GACTATGTATAGCTTCTGTACCTATGT 57.766 37.037 0.00 0.00 33.68 2.29
3246 3478 9.688091 TGGTACATATTGTAACACAACCATTAT 57.312 29.630 1.37 0.00 44.80 1.28
3269 3501 9.744125 TTATATATAATGAGATAAGGCACCCCT 57.256 33.333 0.81 0.00 45.77 4.79
3271 3503 7.682787 ATATAATGAGATAAGGCACCCCTAG 57.317 40.000 0.00 0.00 41.90 3.02
3272 3504 3.637821 ATGAGATAAGGCACCCCTAGA 57.362 47.619 0.00 0.00 41.90 2.43
3273 3505 2.964209 TGAGATAAGGCACCCCTAGAG 58.036 52.381 0.00 0.00 41.90 2.43
3274 3506 2.252714 GAGATAAGGCACCCCTAGAGG 58.747 57.143 0.00 0.00 41.90 3.69
3285 3517 2.377136 CCTAGAGGGTTGTGCTGGT 58.623 57.895 0.00 0.00 0.00 4.00
3286 3518 0.693049 CCTAGAGGGTTGTGCTGGTT 59.307 55.000 0.00 0.00 0.00 3.67
3287 3519 1.339151 CCTAGAGGGTTGTGCTGGTTC 60.339 57.143 0.00 0.00 0.00 3.62
3288 3520 0.690762 TAGAGGGTTGTGCTGGTTCC 59.309 55.000 0.00 0.00 0.00 3.62
3289 3521 1.603739 GAGGGTTGTGCTGGTTCCC 60.604 63.158 0.00 0.00 38.50 3.97
3290 3522 2.983592 GGGTTGTGCTGGTTCCCG 60.984 66.667 0.00 0.00 0.00 5.14
3291 3523 2.112297 GGTTGTGCTGGTTCCCGA 59.888 61.111 0.00 0.00 0.00 5.14
3292 3524 1.527380 GGTTGTGCTGGTTCCCGAA 60.527 57.895 0.00 0.00 0.00 4.30
3293 3525 1.104577 GGTTGTGCTGGTTCCCGAAA 61.105 55.000 0.00 0.00 0.00 3.46
3294 3526 0.741915 GTTGTGCTGGTTCCCGAAAA 59.258 50.000 0.00 0.00 0.00 2.29
3295 3527 0.741915 TTGTGCTGGTTCCCGAAAAC 59.258 50.000 0.00 0.00 0.00 2.43
3296 3528 0.106918 TGTGCTGGTTCCCGAAAACT 60.107 50.000 0.00 0.00 0.00 2.66
3297 3529 1.029681 GTGCTGGTTCCCGAAAACTT 58.970 50.000 0.00 0.00 0.00 2.66
3298 3530 2.223745 GTGCTGGTTCCCGAAAACTTA 58.776 47.619 0.00 0.00 0.00 2.24
3299 3531 2.817844 GTGCTGGTTCCCGAAAACTTAT 59.182 45.455 0.00 0.00 0.00 1.73
3300 3532 3.254903 GTGCTGGTTCCCGAAAACTTATT 59.745 43.478 0.00 0.00 0.00 1.40
3301 3533 3.254657 TGCTGGTTCCCGAAAACTTATTG 59.745 43.478 0.00 0.00 0.00 1.90
3302 3534 3.254903 GCTGGTTCCCGAAAACTTATTGT 59.745 43.478 0.00 0.00 0.00 2.71
3303 3535 4.615223 GCTGGTTCCCGAAAACTTATTGTC 60.615 45.833 0.00 0.00 0.00 3.18
3304 3536 4.721132 TGGTTCCCGAAAACTTATTGTCT 58.279 39.130 0.00 0.00 0.00 3.41
3305 3537 5.134661 TGGTTCCCGAAAACTTATTGTCTT 58.865 37.500 0.00 0.00 0.00 3.01
3306 3538 6.297582 TGGTTCCCGAAAACTTATTGTCTTA 58.702 36.000 0.00 0.00 0.00 2.10
3307 3539 6.205270 TGGTTCCCGAAAACTTATTGTCTTAC 59.795 38.462 0.00 0.00 0.00 2.34
3308 3540 6.205270 GGTTCCCGAAAACTTATTGTCTTACA 59.795 38.462 0.00 0.00 0.00 2.41
3309 3541 7.094506 GGTTCCCGAAAACTTATTGTCTTACAT 60.095 37.037 0.00 0.00 0.00 2.29
3310 3542 7.372451 TCCCGAAAACTTATTGTCTTACATG 57.628 36.000 0.00 0.00 0.00 3.21
3311 3543 6.373216 TCCCGAAAACTTATTGTCTTACATGG 59.627 38.462 0.00 0.00 0.00 3.66
3312 3544 6.150474 CCCGAAAACTTATTGTCTTACATGGT 59.850 38.462 0.00 0.00 0.00 3.55
3313 3545 7.334921 CCCGAAAACTTATTGTCTTACATGGTA 59.665 37.037 0.00 0.00 0.00 3.25
3314 3546 8.889717 CCGAAAACTTATTGTCTTACATGGTAT 58.110 33.333 0.00 0.00 0.00 2.73
3315 3547 9.916397 CGAAAACTTATTGTCTTACATGGTATC 57.084 33.333 0.00 0.00 0.00 2.24
3318 3550 8.420374 AACTTATTGTCTTACATGGTATCACG 57.580 34.615 0.00 0.00 0.00 4.35
3319 3551 6.479001 ACTTATTGTCTTACATGGTATCACGC 59.521 38.462 0.00 0.00 0.00 5.34
3320 3552 4.465632 TTGTCTTACATGGTATCACGCT 57.534 40.909 0.00 0.00 0.00 5.07
3321 3553 5.585820 TTGTCTTACATGGTATCACGCTA 57.414 39.130 0.00 0.00 0.00 4.26
3322 3554 5.183014 TGTCTTACATGGTATCACGCTAG 57.817 43.478 0.00 0.00 0.00 3.42
3323 3555 4.037565 TGTCTTACATGGTATCACGCTAGG 59.962 45.833 0.00 0.00 0.00 3.02
3324 3556 4.037684 GTCTTACATGGTATCACGCTAGGT 59.962 45.833 0.00 0.00 0.00 3.08
3325 3557 4.647853 TCTTACATGGTATCACGCTAGGTT 59.352 41.667 0.00 0.00 0.00 3.50
3326 3558 5.829391 TCTTACATGGTATCACGCTAGGTTA 59.171 40.000 0.00 0.00 0.00 2.85
3327 3559 4.317671 ACATGGTATCACGCTAGGTTAC 57.682 45.455 0.00 0.00 0.00 2.50
3328 3560 3.243301 ACATGGTATCACGCTAGGTTACG 60.243 47.826 0.00 0.00 0.00 3.18
3329 3561 2.642427 TGGTATCACGCTAGGTTACGA 58.358 47.619 0.00 0.00 0.00 3.43
3330 3562 3.216800 TGGTATCACGCTAGGTTACGAT 58.783 45.455 0.00 0.00 0.00 3.73
3331 3563 3.251729 TGGTATCACGCTAGGTTACGATC 59.748 47.826 0.00 0.00 0.00 3.69
3332 3564 2.682952 ATCACGCTAGGTTACGATCG 57.317 50.000 14.88 14.88 0.00 3.69
3333 3565 0.028505 TCACGCTAGGTTACGATCGC 59.971 55.000 16.60 0.00 0.00 4.58
3334 3566 0.029035 CACGCTAGGTTACGATCGCT 59.971 55.000 16.60 6.62 0.00 4.93
3335 3567 0.737219 ACGCTAGGTTACGATCGCTT 59.263 50.000 16.60 0.00 0.00 4.68
3336 3568 1.268437 ACGCTAGGTTACGATCGCTTC 60.268 52.381 16.60 5.25 0.00 3.86
3337 3569 1.768510 GCTAGGTTACGATCGCTTCC 58.231 55.000 16.60 14.35 0.00 3.46
3338 3570 1.925068 GCTAGGTTACGATCGCTTCCG 60.925 57.143 16.60 4.59 0.00 4.30
3339 3571 0.029834 TAGGTTACGATCGCTTCCGC 59.970 55.000 16.60 0.00 0.00 5.54
3340 3572 1.226888 GGTTACGATCGCTTCCGCT 60.227 57.895 16.60 0.00 0.00 5.52
3341 3573 0.804933 GGTTACGATCGCTTCCGCTT 60.805 55.000 16.60 0.00 0.00 4.68
3342 3574 0.571197 GTTACGATCGCTTCCGCTTC 59.429 55.000 16.60 0.00 0.00 3.86
3343 3575 0.454600 TTACGATCGCTTCCGCTTCT 59.545 50.000 16.60 0.00 0.00 2.85
3344 3576 1.302366 TACGATCGCTTCCGCTTCTA 58.698 50.000 16.60 0.00 0.00 2.10
3345 3577 0.454600 ACGATCGCTTCCGCTTCTAA 59.545 50.000 16.60 0.00 0.00 2.10
3346 3578 1.135199 ACGATCGCTTCCGCTTCTAAA 60.135 47.619 16.60 0.00 0.00 1.85
3347 3579 1.255600 CGATCGCTTCCGCTTCTAAAC 59.744 52.381 0.26 0.00 0.00 2.01
3348 3580 1.593469 GATCGCTTCCGCTTCTAAACC 59.407 52.381 0.00 0.00 0.00 3.27
3349 3581 0.390735 TCGCTTCCGCTTCTAAACCC 60.391 55.000 0.00 0.00 0.00 4.11
3350 3582 0.391263 CGCTTCCGCTTCTAAACCCT 60.391 55.000 0.00 0.00 0.00 4.34
3351 3583 1.134907 CGCTTCCGCTTCTAAACCCTA 60.135 52.381 0.00 0.00 0.00 3.53
3352 3584 2.675889 CGCTTCCGCTTCTAAACCCTAA 60.676 50.000 0.00 0.00 0.00 2.69
3353 3585 3.542648 GCTTCCGCTTCTAAACCCTAAT 58.457 45.455 0.00 0.00 0.00 1.73
3354 3586 4.700700 GCTTCCGCTTCTAAACCCTAATA 58.299 43.478 0.00 0.00 0.00 0.98
3355 3587 4.510711 GCTTCCGCTTCTAAACCCTAATAC 59.489 45.833 0.00 0.00 0.00 1.89
3356 3588 4.677673 TCCGCTTCTAAACCCTAATACC 57.322 45.455 0.00 0.00 0.00 2.73
3357 3589 3.389002 TCCGCTTCTAAACCCTAATACCC 59.611 47.826 0.00 0.00 0.00 3.69
3358 3590 3.387397 CGCTTCTAAACCCTAATACCCG 58.613 50.000 0.00 0.00 0.00 5.28
3359 3591 3.136763 GCTTCTAAACCCTAATACCCGC 58.863 50.000 0.00 0.00 0.00 6.13
3360 3592 3.432608 GCTTCTAAACCCTAATACCCGCA 60.433 47.826 0.00 0.00 0.00 5.69
3361 3593 3.825143 TCTAAACCCTAATACCCGCAC 57.175 47.619 0.00 0.00 0.00 5.34
3362 3594 2.435437 TCTAAACCCTAATACCCGCACC 59.565 50.000 0.00 0.00 0.00 5.01
3363 3595 0.107557 AAACCCTAATACCCGCACCG 60.108 55.000 0.00 0.00 0.00 4.94
3364 3596 2.280592 CCCTAATACCCGCACCGC 60.281 66.667 0.00 0.00 0.00 5.68
3365 3597 2.280592 CCTAATACCCGCACCGCC 60.281 66.667 0.00 0.00 0.00 6.13
3366 3598 2.660552 CTAATACCCGCACCGCCG 60.661 66.667 0.00 0.00 0.00 6.46
3367 3599 4.895478 TAATACCCGCACCGCCGC 62.895 66.667 0.00 0.00 0.00 6.53
3451 3683 4.265056 GCCACCACCGGTTCCACT 62.265 66.667 2.97 0.00 31.02 4.00
3452 3684 2.281484 CCACCACCGGTTCCACTG 60.281 66.667 2.97 0.00 31.02 3.66
3453 3685 2.978010 CACCACCGGTTCCACTGC 60.978 66.667 2.97 0.00 31.02 4.40
3454 3686 3.168528 ACCACCGGTTCCACTGCT 61.169 61.111 2.97 0.00 27.29 4.24
3455 3687 2.669569 CCACCGGTTCCACTGCTG 60.670 66.667 2.97 0.00 0.00 4.41
3456 3688 3.357079 CACCGGTTCCACTGCTGC 61.357 66.667 2.97 0.00 0.00 5.25
3457 3689 4.988598 ACCGGTTCCACTGCTGCG 62.989 66.667 0.00 0.00 0.00 5.18
3462 3694 4.269523 TTCCACTGCTGCGGGCTT 62.270 61.111 13.87 0.00 42.39 4.35
3463 3695 4.704833 TCCACTGCTGCGGGCTTC 62.705 66.667 13.87 0.00 42.39 3.86
3465 3697 4.711949 CACTGCTGCGGGCTTCCT 62.712 66.667 13.87 0.00 42.39 3.36
3466 3698 4.400961 ACTGCTGCGGGCTTCCTC 62.401 66.667 13.87 0.00 42.39 3.71
3474 3706 3.471806 GGGCTTCCTCCCGGTCTC 61.472 72.222 0.00 0.00 36.38 3.36
3475 3707 2.364448 GGCTTCCTCCCGGTCTCT 60.364 66.667 0.00 0.00 0.00 3.10
3476 3708 2.428085 GGCTTCCTCCCGGTCTCTC 61.428 68.421 0.00 0.00 0.00 3.20
3477 3709 1.380650 GCTTCCTCCCGGTCTCTCT 60.381 63.158 0.00 0.00 0.00 3.10
3478 3710 0.973496 GCTTCCTCCCGGTCTCTCTT 60.973 60.000 0.00 0.00 0.00 2.85
3479 3711 0.820871 CTTCCTCCCGGTCTCTCTTG 59.179 60.000 0.00 0.00 0.00 3.02
3480 3712 1.258445 TTCCTCCCGGTCTCTCTTGC 61.258 60.000 0.00 0.00 0.00 4.01
3481 3713 2.492090 CTCCCGGTCTCTCTTGCG 59.508 66.667 0.00 0.00 0.00 4.85
3482 3714 3.068691 TCCCGGTCTCTCTTGCGG 61.069 66.667 0.00 0.00 0.00 5.69
3483 3715 4.821589 CCCGGTCTCTCTTGCGGC 62.822 72.222 0.00 0.00 0.00 6.53
3484 3716 3.764466 CCGGTCTCTCTTGCGGCT 61.764 66.667 0.00 0.00 0.00 5.52
3485 3717 2.202676 CGGTCTCTCTTGCGGCTC 60.203 66.667 0.00 0.00 0.00 4.70
3486 3718 2.705821 CGGTCTCTCTTGCGGCTCT 61.706 63.158 0.00 0.00 0.00 4.09
3487 3719 1.153667 GGTCTCTCTTGCGGCTCTG 60.154 63.158 0.00 0.00 0.00 3.35
3488 3720 1.809209 GTCTCTCTTGCGGCTCTGC 60.809 63.158 0.00 0.00 0.00 4.26
3489 3721 1.981312 TCTCTCTTGCGGCTCTGCT 60.981 57.895 0.00 0.00 35.36 4.24
3490 3722 1.519013 CTCTCTTGCGGCTCTGCTC 60.519 63.158 0.00 0.00 35.36 4.26
3491 3723 2.223200 CTCTCTTGCGGCTCTGCTCA 62.223 60.000 0.00 0.00 35.36 4.26
3492 3724 1.375140 CTCTTGCGGCTCTGCTCAA 60.375 57.895 0.00 0.00 35.36 3.02
3493 3725 1.633852 CTCTTGCGGCTCTGCTCAAC 61.634 60.000 0.00 0.00 35.36 3.18
3494 3726 2.669569 TTGCGGCTCTGCTCAACC 60.670 61.111 0.00 0.00 35.36 3.77
3495 3727 3.182590 TTGCGGCTCTGCTCAACCT 62.183 57.895 0.00 0.00 35.36 3.50
3496 3728 2.817396 GCGGCTCTGCTCAACCTC 60.817 66.667 0.00 0.00 0.00 3.85
3497 3729 2.125350 CGGCTCTGCTCAACCTCC 60.125 66.667 0.00 0.00 0.00 4.30
3498 3730 2.270527 GGCTCTGCTCAACCTCCC 59.729 66.667 0.00 0.00 0.00 4.30
3499 3731 2.125350 GCTCTGCTCAACCTCCCG 60.125 66.667 0.00 0.00 0.00 5.14
3500 3732 2.125350 CTCTGCTCAACCTCCCGC 60.125 66.667 0.00 0.00 0.00 6.13
3501 3733 2.604686 TCTGCTCAACCTCCCGCT 60.605 61.111 0.00 0.00 0.00 5.52
3502 3734 2.125350 CTGCTCAACCTCCCGCTC 60.125 66.667 0.00 0.00 0.00 5.03
3503 3735 3.997064 CTGCTCAACCTCCCGCTCG 62.997 68.421 0.00 0.00 0.00 5.03
3504 3736 3.760035 GCTCAACCTCCCGCTCGA 61.760 66.667 0.00 0.00 0.00 4.04
3505 3737 3.082579 GCTCAACCTCCCGCTCGAT 62.083 63.158 0.00 0.00 0.00 3.59
3506 3738 1.227089 CTCAACCTCCCGCTCGATG 60.227 63.158 0.00 0.00 0.00 3.84
3507 3739 2.892425 CAACCTCCCGCTCGATGC 60.892 66.667 0.00 0.00 38.57 3.91
3508 3740 4.162690 AACCTCCCGCTCGATGCC 62.163 66.667 0.00 0.00 38.78 4.40
3511 3743 4.933064 CTCCCGCTCGATGCCGTC 62.933 72.222 0.00 0.00 38.78 4.79
3513 3745 4.933064 CCCGCTCGATGCCGTCTC 62.933 72.222 0.00 0.00 38.78 3.36
3514 3746 3.893763 CCGCTCGATGCCGTCTCT 61.894 66.667 0.00 0.00 38.78 3.10
3515 3747 2.653448 CGCTCGATGCCGTCTCTG 60.653 66.667 0.00 0.00 38.78 3.35
3516 3748 2.492090 GCTCGATGCCGTCTCTGT 59.508 61.111 0.00 0.00 37.05 3.41
3517 3749 1.153745 GCTCGATGCCGTCTCTGTT 60.154 57.895 0.00 0.00 37.05 3.16
3518 3750 1.142778 GCTCGATGCCGTCTCTGTTC 61.143 60.000 0.00 0.00 37.05 3.18
3519 3751 0.526524 CTCGATGCCGTCTCTGTTCC 60.527 60.000 0.00 0.00 37.05 3.62
3520 3752 1.874019 CGATGCCGTCTCTGTTCCG 60.874 63.158 0.00 0.00 0.00 4.30
3521 3753 1.519455 GATGCCGTCTCTGTTCCGG 60.519 63.158 0.00 0.00 44.46 5.14
3524 3756 2.182030 CCGTCTCTGTTCCGGCTC 59.818 66.667 0.00 0.00 34.62 4.70
3525 3757 2.182030 CGTCTCTGTTCCGGCTCC 59.818 66.667 0.00 0.00 0.00 4.70
3526 3758 2.182030 GTCTCTGTTCCGGCTCCG 59.818 66.667 0.00 0.48 39.44 4.63
3527 3759 2.035155 TCTCTGTTCCGGCTCCGA 59.965 61.111 10.28 0.00 42.83 4.55
3528 3760 1.379977 TCTCTGTTCCGGCTCCGAT 60.380 57.895 10.28 0.00 42.83 4.18
3529 3761 1.066587 CTCTGTTCCGGCTCCGATC 59.933 63.158 10.28 0.69 42.83 3.69
3530 3762 2.278857 CTGTTCCGGCTCCGATCG 60.279 66.667 8.51 8.51 42.83 3.69
3531 3763 3.774959 CTGTTCCGGCTCCGATCGG 62.775 68.421 28.62 28.62 46.89 4.18
3532 3764 4.587189 GTTCCGGCTCCGATCGGG 62.587 72.222 32.79 23.49 45.69 5.14
3533 3765 4.826404 TTCCGGCTCCGATCGGGA 62.826 66.667 32.79 19.13 45.69 5.14
3536 3768 3.833645 CGGCTCCGATCGGGACAA 61.834 66.667 32.79 13.65 40.94 3.18
3537 3769 2.107141 GGCTCCGATCGGGACAAG 59.893 66.667 32.79 23.08 40.94 3.16
3538 3770 2.107141 GCTCCGATCGGGACAAGG 59.893 66.667 32.79 16.51 40.94 3.61
3539 3771 2.423898 GCTCCGATCGGGACAAGGA 61.424 63.158 32.79 11.72 40.94 3.36
3540 3772 1.736586 CTCCGATCGGGACAAGGAG 59.263 63.158 32.79 17.47 40.94 3.69
3541 3773 2.107141 CCGATCGGGACAAGGAGC 59.893 66.667 26.95 0.00 38.47 4.70
3542 3774 2.721167 CCGATCGGGACAAGGAGCA 61.721 63.158 26.95 0.00 38.47 4.26
3543 3775 1.443407 CGATCGGGACAAGGAGCAT 59.557 57.895 7.38 0.00 0.00 3.79
3544 3776 0.598680 CGATCGGGACAAGGAGCATC 60.599 60.000 7.38 0.00 0.00 3.91
3545 3777 0.598680 GATCGGGACAAGGAGCATCG 60.599 60.000 0.00 0.00 34.37 3.84
3546 3778 2.032860 ATCGGGACAAGGAGCATCGG 62.033 60.000 0.00 0.00 34.37 4.18
3547 3779 2.514824 GGGACAAGGAGCATCGGC 60.515 66.667 0.00 0.00 41.61 5.54
3557 3789 2.496817 GCATCGGCTCCGTCTTCT 59.503 61.111 8.28 0.00 40.74 2.85
3558 3790 1.590259 GCATCGGCTCCGTCTTCTC 60.590 63.158 8.28 0.00 40.74 2.87
3559 3791 1.066587 CATCGGCTCCGTCTTCTCC 59.933 63.158 8.28 0.00 40.74 3.71
3560 3792 1.379977 ATCGGCTCCGTCTTCTCCA 60.380 57.895 8.28 0.00 40.74 3.86
3561 3793 1.668101 ATCGGCTCCGTCTTCTCCAC 61.668 60.000 8.28 0.00 40.74 4.02
3562 3794 2.182030 GGCTCCGTCTTCTCCACG 59.818 66.667 0.00 0.00 36.99 4.94
3563 3795 2.507324 GCTCCGTCTTCTCCACGC 60.507 66.667 0.00 0.00 35.87 5.34
3564 3796 2.182030 CTCCGTCTTCTCCACGCC 59.818 66.667 0.00 0.00 35.87 5.68
3565 3797 3.685214 CTCCGTCTTCTCCACGCCG 62.685 68.421 0.00 0.00 35.87 6.46
3594 3826 4.681978 GCTTGGGCGTGACCTCGT 62.682 66.667 0.00 0.00 39.10 4.18
3595 3827 2.738521 CTTGGGCGTGACCTCGTG 60.739 66.667 0.00 0.00 39.10 4.35
3596 3828 4.308458 TTGGGCGTGACCTCGTGG 62.308 66.667 0.99 0.99 39.10 4.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.786901 TTGCACCGCCGTCAACGTA 62.787 57.895 1.48 0.00 37.74 3.57
11 12 3.179265 CGTACTCGCCTTGCACCG 61.179 66.667 0.00 0.00 0.00 4.94
18 19 2.829458 GCTCCCTCGTACTCGCCT 60.829 66.667 0.00 0.00 36.96 5.52
151 172 1.140052 TGTCAAAGGGAAGAAGCACGA 59.860 47.619 0.00 0.00 0.00 4.35
182 203 2.490217 CGTGGTAGAGACCCTGCG 59.510 66.667 0.00 0.00 46.32 5.18
193 215 4.137872 GGTAGGCGCTGCGTGGTA 62.138 66.667 24.04 9.73 0.00 3.25
225 247 2.297597 GGCTGCGATATGGAAGTACTCT 59.702 50.000 0.00 0.00 0.00 3.24
252 276 3.491652 GGAAAGCGAGCGAGTGGC 61.492 66.667 0.00 0.00 44.05 5.01
407 459 1.171308 GTGGTCAGCTCGTGGTAGTA 58.829 55.000 0.00 0.00 0.00 1.82
408 460 0.826256 TGTGGTCAGCTCGTGGTAGT 60.826 55.000 0.00 0.00 0.00 2.73
409 461 0.388649 GTGTGGTCAGCTCGTGGTAG 60.389 60.000 0.00 0.00 0.00 3.18
437 489 0.107312 CTCCTATGGCTGCTGCAACT 60.107 55.000 17.89 3.67 41.91 3.16
438 490 0.107508 TCTCCTATGGCTGCTGCAAC 60.108 55.000 17.89 0.00 41.91 4.17
439 491 0.179702 CTCTCCTATGGCTGCTGCAA 59.820 55.000 17.89 6.50 41.91 4.08
440 492 1.693152 CCTCTCCTATGGCTGCTGCA 61.693 60.000 17.89 0.88 41.91 4.41
441 493 1.071128 CCTCTCCTATGGCTGCTGC 59.929 63.158 7.10 7.10 38.76 5.25
442 494 0.680618 CTCCTCTCCTATGGCTGCTG 59.319 60.000 0.00 0.00 0.00 4.41
443 495 0.471591 CCTCCTCTCCTATGGCTGCT 60.472 60.000 0.00 0.00 0.00 4.24
444 496 0.470833 TCCTCCTCTCCTATGGCTGC 60.471 60.000 0.00 0.00 0.00 5.25
445 497 1.337118 GTCCTCCTCTCCTATGGCTG 58.663 60.000 0.00 0.00 0.00 4.85
446 498 0.937441 TGTCCTCCTCTCCTATGGCT 59.063 55.000 0.00 0.00 0.00 4.75
447 499 1.622811 CATGTCCTCCTCTCCTATGGC 59.377 57.143 0.00 0.00 0.00 4.40
448 500 2.255406 CCATGTCCTCCTCTCCTATGG 58.745 57.143 0.00 0.00 0.00 2.74
449 501 1.622811 GCCATGTCCTCCTCTCCTATG 59.377 57.143 0.00 0.00 0.00 2.23
450 502 1.507300 AGCCATGTCCTCCTCTCCTAT 59.493 52.381 0.00 0.00 0.00 2.57
451 503 0.937441 AGCCATGTCCTCCTCTCCTA 59.063 55.000 0.00 0.00 0.00 2.94
531 606 2.510918 GCTGCGCTGATGAGCTGA 60.511 61.111 19.32 0.00 43.77 4.26
532 607 2.818274 TGCTGCGCTGATGAGCTG 60.818 61.111 19.32 0.00 43.77 4.24
533 608 2.818714 GTGCTGCGCTGATGAGCT 60.819 61.111 19.32 0.00 43.77 4.09
534 609 3.873883 GGTGCTGCGCTGATGAGC 61.874 66.667 19.32 14.13 42.37 4.26
535 610 1.579964 TTTGGTGCTGCGCTGATGAG 61.580 55.000 19.32 2.44 0.00 2.90
536 611 1.600356 TTTGGTGCTGCGCTGATGA 60.600 52.632 19.32 0.00 0.00 2.92
537 612 1.443194 GTTTGGTGCTGCGCTGATG 60.443 57.895 19.32 2.16 0.00 3.07
538 613 2.629656 GGTTTGGTGCTGCGCTGAT 61.630 57.895 19.32 0.00 0.00 2.90
544 619 0.320683 GGGATTTGGTTTGGTGCTGC 60.321 55.000 0.00 0.00 0.00 5.25
546 621 1.632589 GAGGGATTTGGTTTGGTGCT 58.367 50.000 0.00 0.00 0.00 4.40
732 830 9.508642 ACCTCCAAGAAAACAAACAAAAATAAA 57.491 25.926 0.00 0.00 0.00 1.40
735 833 9.679661 AATACCTCCAAGAAAACAAACAAAAAT 57.320 25.926 0.00 0.00 0.00 1.82
861 969 3.175240 CGTGAGGCGTGAGAAGCG 61.175 66.667 0.00 0.00 35.54 4.68
892 1000 3.150949 CAGGGTGAGGTGCACTGA 58.849 61.111 17.98 0.00 46.86 3.41
901 1009 1.306141 TGTAGAGGGGCAGGGTGAG 60.306 63.158 0.00 0.00 0.00 3.51
906 1014 2.579201 CGTGTGTAGAGGGGCAGG 59.421 66.667 0.00 0.00 0.00 4.85
907 1015 2.125512 GCGTGTGTAGAGGGGCAG 60.126 66.667 0.00 0.00 0.00 4.85
908 1016 3.702048 GGCGTGTGTAGAGGGGCA 61.702 66.667 0.00 0.00 0.00 5.36
909 1017 3.372554 GAGGCGTGTGTAGAGGGGC 62.373 68.421 0.00 0.00 0.00 5.80
910 1018 1.949847 CTGAGGCGTGTGTAGAGGGG 61.950 65.000 0.00 0.00 0.00 4.79
911 1019 1.251527 ACTGAGGCGTGTGTAGAGGG 61.252 60.000 0.00 0.00 0.00 4.30
912 1020 0.171455 GACTGAGGCGTGTGTAGAGG 59.829 60.000 0.00 0.00 0.00 3.69
913 1021 1.169577 AGACTGAGGCGTGTGTAGAG 58.830 55.000 0.00 0.00 0.00 2.43
914 1022 1.540267 GAAGACTGAGGCGTGTGTAGA 59.460 52.381 0.00 0.00 0.00 2.59
915 1023 1.542030 AGAAGACTGAGGCGTGTGTAG 59.458 52.381 0.00 0.00 0.00 2.74
916 1024 1.617322 AGAAGACTGAGGCGTGTGTA 58.383 50.000 0.00 0.00 0.00 2.90
942 1050 0.036010 CTCAGGTGGGCAACTAGTGG 60.036 60.000 0.00 0.00 0.00 4.00
943 1051 0.687354 ACTCAGGTGGGCAACTAGTG 59.313 55.000 0.00 0.00 0.00 2.74
944 1052 1.072331 CAACTCAGGTGGGCAACTAGT 59.928 52.381 0.00 0.00 0.00 2.57
945 1053 1.813513 CAACTCAGGTGGGCAACTAG 58.186 55.000 0.00 0.00 0.00 2.57
1047 1155 0.034670 CCTTCCCCTGCTCCTTCTTG 60.035 60.000 0.00 0.00 0.00 3.02
1215 1338 3.412386 GTTGTACAAGGACTTGAGCCAT 58.588 45.455 18.15 0.00 42.93 4.40
1248 1371 4.144681 GCGTGCTTGCTCTGCTCG 62.145 66.667 13.17 13.17 46.00 5.03
1461 1584 0.672401 CGCCGCTGTTAGGAAGGAAA 60.672 55.000 0.00 0.00 0.00 3.13
1467 1590 3.781307 ATGGCGCCGCTGTTAGGA 61.781 61.111 23.90 0.00 0.00 2.94
1473 1596 2.025156 GAAATCATGGCGCCGCTG 59.975 61.111 23.90 21.54 0.00 5.18
1475 1598 4.612536 CGGAAATCATGGCGCCGC 62.613 66.667 23.90 0.00 35.17 6.53
1478 1608 2.025156 CTGCGGAAATCATGGCGC 59.975 61.111 0.00 0.00 0.00 6.53
1513 1643 6.291217 CGATAATTCAACACGCATTGATTTGG 60.291 38.462 14.74 5.54 38.37 3.28
1515 1645 5.229887 GCGATAATTCAACACGCATTGATTT 59.770 36.000 0.00 11.70 46.75 2.17
1875 2047 1.405105 GCAGACACAAGCAAGAAACCA 59.595 47.619 0.00 0.00 0.00 3.67
2002 2174 3.072468 TTGGGGCTCCGGTCGTAG 61.072 66.667 0.00 0.00 35.24 3.51
2617 2834 1.000955 AGACCGTCAGTTCATCACCAC 59.999 52.381 0.40 0.00 0.00 4.16
2678 2902 4.031611 CCTACCCTATCAGGCTATTACCC 58.968 52.174 0.00 0.00 32.73 3.69
2679 2903 4.031611 CCCTACCCTATCAGGCTATTACC 58.968 52.174 0.00 0.00 32.73 2.85
2759 2984 1.523758 CCACAGCCACAGAGGTTAAC 58.476 55.000 0.00 0.00 40.61 2.01
2764 2989 3.644606 AGCCCACAGCCACAGAGG 61.645 66.667 0.00 0.00 45.47 3.69
2765 2990 2.359602 CAGCCCACAGCCACAGAG 60.360 66.667 0.00 0.00 45.47 3.35
2766 2991 3.170672 ACAGCCCACAGCCACAGA 61.171 61.111 0.00 0.00 45.47 3.41
2767 2992 2.981909 CACAGCCCACAGCCACAG 60.982 66.667 0.00 0.00 45.47 3.66
2768 2993 4.584518 CCACAGCCCACAGCCACA 62.585 66.667 0.00 0.00 45.47 4.17
2876 3102 8.508883 TCACTACAGTACTAAGATCTTCCTTC 57.491 38.462 12.24 2.14 0.00 3.46
2886 3112 9.915629 ATTCTGAAACTTCACTACAGTACTAAG 57.084 33.333 0.00 0.00 32.90 2.18
2897 3123 8.510505 GCTAATTCTGAATTCTGAAACTTCACT 58.489 33.333 25.59 9.68 37.36 3.41
2898 3124 8.292448 TGCTAATTCTGAATTCTGAAACTTCAC 58.708 33.333 25.59 15.77 37.36 3.18
2900 3126 8.510505 ACTGCTAATTCTGAATTCTGAAACTTC 58.489 33.333 25.59 17.15 37.36 3.01
2932 3158 6.149474 GCTAGAAAAGGATGTACTTTCAAGCA 59.851 38.462 0.00 0.00 39.63 3.91
2938 3170 6.628644 AGGAGCTAGAAAAGGATGTACTTT 57.371 37.500 0.00 0.00 42.17 2.66
2953 3185 9.727859 TGAATTGATAGTACTAGTAGGAGCTAG 57.272 37.037 8.85 0.00 42.96 3.42
2955 3187 8.852135 GTTGAATTGATAGTACTAGTAGGAGCT 58.148 37.037 8.85 0.00 0.00 4.09
2956 3188 8.083462 GGTTGAATTGATAGTACTAGTAGGAGC 58.917 40.741 8.85 0.00 0.00 4.70
2957 3189 9.132923 TGGTTGAATTGATAGTACTAGTAGGAG 57.867 37.037 8.85 0.00 0.00 3.69
2958 3190 9.483489 TTGGTTGAATTGATAGTACTAGTAGGA 57.517 33.333 8.85 0.00 0.00 2.94
2962 3194 8.041323 CCACTTGGTTGAATTGATAGTACTAGT 58.959 37.037 8.85 0.00 0.00 2.57
2963 3195 7.495934 CCCACTTGGTTGAATTGATAGTACTAG 59.504 40.741 8.85 0.00 0.00 2.57
2964 3196 7.335627 CCCACTTGGTTGAATTGATAGTACTA 58.664 38.462 4.77 4.77 0.00 1.82
2965 3197 6.180472 CCCACTTGGTTGAATTGATAGTACT 58.820 40.000 0.00 0.00 0.00 2.73
2966 3198 6.436843 CCCACTTGGTTGAATTGATAGTAC 57.563 41.667 0.00 0.00 0.00 2.73
2988 3220 8.801891 GTGGTATCACTTGGTGTATACCCACC 62.802 50.000 21.66 8.64 45.63 4.61
2994 3226 5.663556 TGATGGTGGTATCACTTGGTGTATA 59.336 40.000 6.00 0.00 43.17 1.47
3023 3255 4.126437 GTTGGGCATGTTAAAGTTTTGCT 58.874 39.130 9.28 0.00 33.86 3.91
3032 3264 2.552599 TGTCTCGTTGGGCATGTTAA 57.447 45.000 0.00 0.00 0.00 2.01
3038 3270 0.756294 TTCTCTTGTCTCGTTGGGCA 59.244 50.000 0.00 0.00 0.00 5.36
3041 3273 7.258441 TCATTAGTATTCTCTTGTCTCGTTGG 58.742 38.462 0.00 0.00 0.00 3.77
3059 3291 9.884636 TGTAGCATTTTGTACTGTATCATTAGT 57.115 29.630 0.00 0.00 0.00 2.24
3061 3293 9.884636 AGTGTAGCATTTTGTACTGTATCATTA 57.115 29.630 0.00 0.00 0.00 1.90
3062 3294 8.792830 AGTGTAGCATTTTGTACTGTATCATT 57.207 30.769 0.00 0.00 0.00 2.57
3063 3295 9.884636 TTAGTGTAGCATTTTGTACTGTATCAT 57.115 29.630 0.00 0.00 0.00 2.45
3064 3296 9.884636 ATTAGTGTAGCATTTTGTACTGTATCA 57.115 29.630 0.00 0.00 0.00 2.15
3066 3298 9.109393 CCATTAGTGTAGCATTTTGTACTGTAT 57.891 33.333 0.00 0.00 0.00 2.29
3067 3299 7.551262 CCCATTAGTGTAGCATTTTGTACTGTA 59.449 37.037 0.00 0.00 0.00 2.74
3068 3300 6.374333 CCCATTAGTGTAGCATTTTGTACTGT 59.626 38.462 0.00 0.00 0.00 3.55
3069 3301 6.677920 GCCCATTAGTGTAGCATTTTGTACTG 60.678 42.308 0.00 0.00 0.00 2.74
3070 3302 5.357032 GCCCATTAGTGTAGCATTTTGTACT 59.643 40.000 0.00 0.00 0.00 2.73
3071 3303 5.449999 GGCCCATTAGTGTAGCATTTTGTAC 60.450 44.000 0.00 0.00 0.00 2.90
3072 3304 4.642885 GGCCCATTAGTGTAGCATTTTGTA 59.357 41.667 0.00 0.00 0.00 2.41
3073 3305 3.447229 GGCCCATTAGTGTAGCATTTTGT 59.553 43.478 0.00 0.00 0.00 2.83
3074 3306 3.701040 AGGCCCATTAGTGTAGCATTTTG 59.299 43.478 0.00 0.00 0.00 2.44
3075 3307 3.954258 GAGGCCCATTAGTGTAGCATTTT 59.046 43.478 0.00 0.00 0.00 1.82
3076 3308 3.053693 TGAGGCCCATTAGTGTAGCATTT 60.054 43.478 0.00 0.00 0.00 2.32
3077 3309 2.509548 TGAGGCCCATTAGTGTAGCATT 59.490 45.455 0.00 0.00 0.00 3.56
3078 3310 2.126882 TGAGGCCCATTAGTGTAGCAT 58.873 47.619 0.00 0.00 0.00 3.79
3079 3311 1.578897 TGAGGCCCATTAGTGTAGCA 58.421 50.000 0.00 0.00 0.00 3.49
3080 3312 2.938956 ATGAGGCCCATTAGTGTAGC 57.061 50.000 0.00 0.00 29.34 3.58
3081 3313 3.324846 TGCTATGAGGCCCATTAGTGTAG 59.675 47.826 11.36 4.20 36.71 2.74
3082 3314 3.313791 TGCTATGAGGCCCATTAGTGTA 58.686 45.455 11.36 0.00 36.71 2.90
3083 3315 2.126882 TGCTATGAGGCCCATTAGTGT 58.873 47.619 11.36 0.00 36.71 3.55
3084 3316 2.936919 TGCTATGAGGCCCATTAGTG 57.063 50.000 11.36 3.19 36.71 2.74
3085 3317 3.254960 AGATGCTATGAGGCCCATTAGT 58.745 45.455 11.36 0.00 36.71 2.24
3086 3318 3.996921 AGATGCTATGAGGCCCATTAG 57.003 47.619 11.36 5.70 36.71 1.73
3087 3319 3.652387 TGAAGATGCTATGAGGCCCATTA 59.348 43.478 11.36 1.42 36.71 1.90
3088 3320 2.444388 TGAAGATGCTATGAGGCCCATT 59.556 45.455 11.36 0.00 36.71 3.16
3089 3321 2.060275 TGAAGATGCTATGAGGCCCAT 58.940 47.619 0.00 5.44 39.25 4.00
3090 3322 1.510492 TGAAGATGCTATGAGGCCCA 58.490 50.000 0.00 0.00 0.00 5.36
3091 3323 2.645838 TTGAAGATGCTATGAGGCCC 57.354 50.000 0.00 0.00 0.00 5.80
3092 3324 2.740981 CGATTGAAGATGCTATGAGGCC 59.259 50.000 0.00 0.00 0.00 5.19
3093 3325 2.740981 CCGATTGAAGATGCTATGAGGC 59.259 50.000 0.00 0.00 0.00 4.70
3094 3326 3.993081 GACCGATTGAAGATGCTATGAGG 59.007 47.826 0.00 0.00 0.00 3.86
3095 3327 4.625028 TGACCGATTGAAGATGCTATGAG 58.375 43.478 0.00 0.00 0.00 2.90
3096 3328 4.670896 TGACCGATTGAAGATGCTATGA 57.329 40.909 0.00 0.00 0.00 2.15
3097 3329 6.393171 TCTATGACCGATTGAAGATGCTATG 58.607 40.000 0.00 0.00 0.00 2.23
3098 3330 6.596309 TCTATGACCGATTGAAGATGCTAT 57.404 37.500 0.00 0.00 0.00 2.97
3099 3331 6.405278 TTCTATGACCGATTGAAGATGCTA 57.595 37.500 0.00 0.00 0.00 3.49
3100 3332 4.944619 TCTATGACCGATTGAAGATGCT 57.055 40.909 0.00 0.00 0.00 3.79
3101 3333 5.991328 TTTCTATGACCGATTGAAGATGC 57.009 39.130 0.00 0.00 29.14 3.91
3102 3334 9.229784 CAAATTTTCTATGACCGATTGAAGATG 57.770 33.333 0.00 0.00 29.14 2.90
3103 3335 8.408601 CCAAATTTTCTATGACCGATTGAAGAT 58.591 33.333 0.00 0.00 29.14 2.40
3104 3336 7.628366 GCCAAATTTTCTATGACCGATTGAAGA 60.628 37.037 0.00 0.00 29.14 2.87
3105 3337 6.473455 GCCAAATTTTCTATGACCGATTGAAG 59.527 38.462 0.00 0.00 29.14 3.02
3106 3338 6.329496 GCCAAATTTTCTATGACCGATTGAA 58.671 36.000 0.00 0.00 0.00 2.69
3107 3339 5.163561 GGCCAAATTTTCTATGACCGATTGA 60.164 40.000 0.00 0.00 0.00 2.57
3108 3340 5.043248 GGCCAAATTTTCTATGACCGATTG 58.957 41.667 0.00 0.00 0.00 2.67
3109 3341 4.099419 GGGCCAAATTTTCTATGACCGATT 59.901 41.667 4.39 0.00 0.00 3.34
3110 3342 3.636764 GGGCCAAATTTTCTATGACCGAT 59.363 43.478 4.39 0.00 0.00 4.18
3111 3343 3.020984 GGGCCAAATTTTCTATGACCGA 58.979 45.455 4.39 0.00 0.00 4.69
3112 3344 2.100749 GGGGCCAAATTTTCTATGACCG 59.899 50.000 4.39 0.00 0.00 4.79
3113 3345 3.374764 AGGGGCCAAATTTTCTATGACC 58.625 45.455 4.39 0.00 0.00 4.02
3114 3346 6.731292 ATAAGGGGCCAAATTTTCTATGAC 57.269 37.500 4.39 0.00 0.00 3.06
3115 3347 7.358263 TGTATAAGGGGCCAAATTTTCTATGA 58.642 34.615 4.39 0.00 0.00 2.15
3116 3348 7.595819 TGTATAAGGGGCCAAATTTTCTATG 57.404 36.000 4.39 0.00 0.00 2.23
3117 3349 7.454694 GGATGTATAAGGGGCCAAATTTTCTAT 59.545 37.037 4.39 0.00 0.00 1.98
3118 3350 6.780522 GGATGTATAAGGGGCCAAATTTTCTA 59.219 38.462 4.39 0.00 0.00 2.10
3119 3351 5.602561 GGATGTATAAGGGGCCAAATTTTCT 59.397 40.000 4.39 0.00 0.00 2.52
3120 3352 5.508994 CGGATGTATAAGGGGCCAAATTTTC 60.509 44.000 4.39 0.00 0.00 2.29
3121 3353 4.343814 CGGATGTATAAGGGGCCAAATTTT 59.656 41.667 4.39 0.00 0.00 1.82
3122 3354 3.895041 CGGATGTATAAGGGGCCAAATTT 59.105 43.478 4.39 0.00 0.00 1.82
3123 3355 3.496331 CGGATGTATAAGGGGCCAAATT 58.504 45.455 4.39 0.00 0.00 1.82
3124 3356 2.817839 GCGGATGTATAAGGGGCCAAAT 60.818 50.000 4.39 0.00 0.00 2.32
3125 3357 1.477923 GCGGATGTATAAGGGGCCAAA 60.478 52.381 4.39 0.00 0.00 3.28
3126 3358 0.109723 GCGGATGTATAAGGGGCCAA 59.890 55.000 4.39 0.00 0.00 4.52
3127 3359 1.758592 GCGGATGTATAAGGGGCCA 59.241 57.895 4.39 0.00 0.00 5.36
3128 3360 1.375523 CGCGGATGTATAAGGGGCC 60.376 63.158 0.00 0.00 0.00 5.80
3129 3361 1.375523 CCGCGGATGTATAAGGGGC 60.376 63.158 24.07 0.00 0.00 5.80
3130 3362 0.037605 GTCCGCGGATGTATAAGGGG 60.038 60.000 33.58 0.00 37.95 4.79
3131 3363 0.677288 TGTCCGCGGATGTATAAGGG 59.323 55.000 33.58 0.00 0.00 3.95
3132 3364 2.519377 TTGTCCGCGGATGTATAAGG 57.481 50.000 33.58 0.00 0.00 2.69
3133 3365 2.157668 GCATTGTCCGCGGATGTATAAG 59.842 50.000 33.58 17.88 0.00 1.73
3134 3366 2.139917 GCATTGTCCGCGGATGTATAA 58.860 47.619 33.58 20.43 0.00 0.98
3135 3367 1.343142 AGCATTGTCCGCGGATGTATA 59.657 47.619 33.58 15.12 0.00 1.47
3136 3368 0.106708 AGCATTGTCCGCGGATGTAT 59.893 50.000 33.58 21.05 0.00 2.29
3137 3369 0.529773 GAGCATTGTCCGCGGATGTA 60.530 55.000 33.58 19.67 0.00 2.29
3138 3370 1.815421 GAGCATTGTCCGCGGATGT 60.815 57.895 33.58 17.48 0.00 3.06
3139 3371 1.815003 TGAGCATTGTCCGCGGATG 60.815 57.895 33.58 26.15 0.00 3.51
3140 3372 1.815421 GTGAGCATTGTCCGCGGAT 60.815 57.895 33.58 14.84 0.00 4.18
3141 3373 2.434185 GTGAGCATTGTCCGCGGA 60.434 61.111 27.28 27.28 0.00 5.54
3142 3374 2.434884 AGTGAGCATTGTCCGCGG 60.435 61.111 22.12 22.12 0.00 6.46
3143 3375 1.737735 TGAGTGAGCATTGTCCGCG 60.738 57.895 0.00 0.00 0.00 6.46
3144 3376 0.950555 TGTGAGTGAGCATTGTCCGC 60.951 55.000 0.00 0.00 0.00 5.54
3145 3377 0.792640 GTGTGAGTGAGCATTGTCCG 59.207 55.000 0.00 0.00 0.00 4.79
3146 3378 1.160137 GGTGTGAGTGAGCATTGTCC 58.840 55.000 0.00 0.00 0.00 4.02
3147 3379 2.175878 AGGTGTGAGTGAGCATTGTC 57.824 50.000 0.00 0.00 0.00 3.18
3148 3380 2.645838 AAGGTGTGAGTGAGCATTGT 57.354 45.000 0.00 0.00 0.00 2.71
3149 3381 5.048504 ACAAATAAGGTGTGAGTGAGCATTG 60.049 40.000 0.00 0.00 0.00 2.82
3150 3382 5.072741 ACAAATAAGGTGTGAGTGAGCATT 58.927 37.500 0.00 0.00 0.00 3.56
3151 3383 4.655963 ACAAATAAGGTGTGAGTGAGCAT 58.344 39.130 0.00 0.00 0.00 3.79
3152 3384 4.065088 GACAAATAAGGTGTGAGTGAGCA 58.935 43.478 0.00 0.00 0.00 4.26
3153 3385 3.437049 GGACAAATAAGGTGTGAGTGAGC 59.563 47.826 0.00 0.00 0.00 4.26
3154 3386 3.679980 CGGACAAATAAGGTGTGAGTGAG 59.320 47.826 0.00 0.00 0.00 3.51
3155 3387 3.070446 ACGGACAAATAAGGTGTGAGTGA 59.930 43.478 0.00 0.00 0.00 3.41
3156 3388 3.399330 ACGGACAAATAAGGTGTGAGTG 58.601 45.455 0.00 0.00 0.00 3.51
3157 3389 3.323979 AGACGGACAAATAAGGTGTGAGT 59.676 43.478 0.00 0.00 0.00 3.41
3158 3390 3.926616 AGACGGACAAATAAGGTGTGAG 58.073 45.455 0.00 0.00 0.00 3.51
3159 3391 3.576982 AGAGACGGACAAATAAGGTGTGA 59.423 43.478 0.00 0.00 0.00 3.58
3160 3392 3.679980 CAGAGACGGACAAATAAGGTGTG 59.320 47.826 0.00 0.00 0.00 3.82
3161 3393 3.323979 ACAGAGACGGACAAATAAGGTGT 59.676 43.478 0.00 0.00 0.00 4.16
3162 3394 3.926616 ACAGAGACGGACAAATAAGGTG 58.073 45.455 0.00 0.00 0.00 4.00
3163 3395 4.618920 AACAGAGACGGACAAATAAGGT 57.381 40.909 0.00 0.00 0.00 3.50
3164 3396 5.805994 GTCTAACAGAGACGGACAAATAAGG 59.194 44.000 0.00 0.00 45.16 2.69
3165 3397 6.872670 GTCTAACAGAGACGGACAAATAAG 57.127 41.667 0.00 0.00 45.16 1.73
3177 3409 9.278978 CAGAAGCTATACATAGTCTAACAGAGA 57.721 37.037 0.00 0.00 32.96 3.10
3178 3410 9.062524 ACAGAAGCTATACATAGTCTAACAGAG 57.937 37.037 0.00 0.00 32.96 3.35
3179 3411 8.982091 ACAGAAGCTATACATAGTCTAACAGA 57.018 34.615 0.00 0.00 32.96 3.41
3181 3413 9.064706 GGTACAGAAGCTATACATAGTCTAACA 57.935 37.037 0.00 0.00 32.96 2.41
3182 3414 9.287373 AGGTACAGAAGCTATACATAGTCTAAC 57.713 37.037 0.00 0.00 32.98 2.34
3185 3417 9.456147 CATAGGTACAGAAGCTATACATAGTCT 57.544 37.037 0.00 0.00 45.12 3.24
3186 3418 9.233649 ACATAGGTACAGAAGCTATACATAGTC 57.766 37.037 0.00 0.00 45.12 2.59
3217 3449 9.860650 ATGGTTGTGTTACAATATGTACCATAT 57.139 29.630 10.20 0.00 39.26 1.78
3218 3450 9.688091 AATGGTTGTGTTACAATATGTACCATA 57.312 29.630 11.64 0.00 39.79 2.74
3219 3451 8.588290 AATGGTTGTGTTACAATATGTACCAT 57.412 30.769 7.28 7.28 41.43 3.55
3220 3452 9.688091 ATAATGGTTGTGTTACAATATGTACCA 57.312 29.630 0.00 0.00 40.59 3.25
3243 3475 9.744125 AGGGGTGCCTTATCTCATTATATATAA 57.256 33.333 7.62 7.62 0.00 0.98
3245 3477 9.386122 CTAGGGGTGCCTTATCTCATTATATAT 57.614 37.037 0.00 0.00 0.00 0.86
3246 3478 8.574853 TCTAGGGGTGCCTTATCTCATTATATA 58.425 37.037 0.00 0.00 0.00 0.86
3247 3479 7.430844 TCTAGGGGTGCCTTATCTCATTATAT 58.569 38.462 0.00 0.00 0.00 0.86
3248 3480 6.811574 TCTAGGGGTGCCTTATCTCATTATA 58.188 40.000 0.00 0.00 0.00 0.98
3249 3481 5.665701 TCTAGGGGTGCCTTATCTCATTAT 58.334 41.667 0.00 0.00 0.00 1.28
3250 3482 5.087323 CTCTAGGGGTGCCTTATCTCATTA 58.913 45.833 0.00 0.00 0.00 1.90
3251 3483 3.906846 CTCTAGGGGTGCCTTATCTCATT 59.093 47.826 0.00 0.00 0.00 2.57
3252 3484 3.515562 CTCTAGGGGTGCCTTATCTCAT 58.484 50.000 0.00 0.00 0.00 2.90
3253 3485 2.426414 CCTCTAGGGGTGCCTTATCTCA 60.426 54.545 0.00 0.00 0.00 3.27
3254 3486 2.252714 CCTCTAGGGGTGCCTTATCTC 58.747 57.143 0.00 0.00 0.00 2.75
3255 3487 2.407340 CCTCTAGGGGTGCCTTATCT 57.593 55.000 0.00 0.00 0.00 1.98
3267 3499 0.693049 AACCAGCACAACCCTCTAGG 59.307 55.000 0.00 0.00 43.78 3.02
3268 3500 1.339151 GGAACCAGCACAACCCTCTAG 60.339 57.143 0.00 0.00 0.00 2.43
3269 3501 0.690762 GGAACCAGCACAACCCTCTA 59.309 55.000 0.00 0.00 0.00 2.43
3270 3502 1.456287 GGAACCAGCACAACCCTCT 59.544 57.895 0.00 0.00 0.00 3.69
3271 3503 4.081050 GGAACCAGCACAACCCTC 57.919 61.111 0.00 0.00 0.00 4.30
3284 3516 7.193377 TGTAAGACAATAAGTTTTCGGGAAC 57.807 36.000 0.00 0.00 0.00 3.62
3285 3517 7.094549 CCATGTAAGACAATAAGTTTTCGGGAA 60.095 37.037 0.00 0.00 0.00 3.97
3286 3518 6.373216 CCATGTAAGACAATAAGTTTTCGGGA 59.627 38.462 0.00 0.00 0.00 5.14
3287 3519 6.150474 ACCATGTAAGACAATAAGTTTTCGGG 59.850 38.462 0.00 0.00 0.00 5.14
3288 3520 7.141100 ACCATGTAAGACAATAAGTTTTCGG 57.859 36.000 0.00 0.00 0.00 4.30
3289 3521 9.916397 GATACCATGTAAGACAATAAGTTTTCG 57.084 33.333 0.00 0.00 0.00 3.46
3292 3524 8.879759 CGTGATACCATGTAAGACAATAAGTTT 58.120 33.333 0.00 0.00 0.00 2.66
3293 3525 7.011109 GCGTGATACCATGTAAGACAATAAGTT 59.989 37.037 0.00 0.00 0.00 2.66
3294 3526 6.479001 GCGTGATACCATGTAAGACAATAAGT 59.521 38.462 0.00 0.00 0.00 2.24
3295 3527 6.701841 AGCGTGATACCATGTAAGACAATAAG 59.298 38.462 0.00 0.00 0.00 1.73
3296 3528 6.578944 AGCGTGATACCATGTAAGACAATAA 58.421 36.000 0.00 0.00 0.00 1.40
3297 3529 6.156748 AGCGTGATACCATGTAAGACAATA 57.843 37.500 0.00 0.00 0.00 1.90
3298 3530 5.023533 AGCGTGATACCATGTAAGACAAT 57.976 39.130 0.00 0.00 0.00 2.71
3299 3531 4.465632 AGCGTGATACCATGTAAGACAA 57.534 40.909 0.00 0.00 0.00 3.18
3300 3532 4.037565 CCTAGCGTGATACCATGTAAGACA 59.962 45.833 0.00 0.00 0.00 3.41
3301 3533 4.037684 ACCTAGCGTGATACCATGTAAGAC 59.962 45.833 0.00 0.00 0.00 3.01
3302 3534 4.212716 ACCTAGCGTGATACCATGTAAGA 58.787 43.478 0.00 0.00 0.00 2.10
3303 3535 4.585955 ACCTAGCGTGATACCATGTAAG 57.414 45.455 0.00 0.00 0.00 2.34
3304 3536 5.506151 CGTAACCTAGCGTGATACCATGTAA 60.506 44.000 0.00 0.00 0.00 2.41
3305 3537 4.023792 CGTAACCTAGCGTGATACCATGTA 60.024 45.833 0.00 0.00 0.00 2.29
3306 3538 3.243301 CGTAACCTAGCGTGATACCATGT 60.243 47.826 0.00 0.00 0.00 3.21
3307 3539 3.004002 TCGTAACCTAGCGTGATACCATG 59.996 47.826 0.00 0.00 0.00 3.66
3308 3540 3.216800 TCGTAACCTAGCGTGATACCAT 58.783 45.455 0.00 0.00 0.00 3.55
3309 3541 2.642427 TCGTAACCTAGCGTGATACCA 58.358 47.619 0.00 0.00 0.00 3.25
3310 3542 3.666374 CGATCGTAACCTAGCGTGATACC 60.666 52.174 7.03 0.00 0.00 2.73
3311 3543 3.477122 CGATCGTAACCTAGCGTGATAC 58.523 50.000 7.03 0.00 0.00 2.24
3312 3544 2.096069 GCGATCGTAACCTAGCGTGATA 60.096 50.000 17.81 0.00 0.00 2.15
3313 3545 1.334779 GCGATCGTAACCTAGCGTGAT 60.335 52.381 17.81 0.00 0.00 3.06
3314 3546 0.028505 GCGATCGTAACCTAGCGTGA 59.971 55.000 17.81 0.00 0.00 4.35
3315 3547 0.029035 AGCGATCGTAACCTAGCGTG 59.971 55.000 17.81 0.00 0.00 5.34
3316 3548 0.737219 AAGCGATCGTAACCTAGCGT 59.263 50.000 17.81 0.00 0.00 5.07
3317 3549 1.396644 GAAGCGATCGTAACCTAGCG 58.603 55.000 17.81 0.00 0.00 4.26
3318 3550 1.768510 GGAAGCGATCGTAACCTAGC 58.231 55.000 17.81 0.00 0.00 3.42
3319 3551 2.033793 CGGAAGCGATCGTAACCTAG 57.966 55.000 17.81 2.69 0.00 3.02
3333 3565 5.055144 GGTATTAGGGTTTAGAAGCGGAAG 58.945 45.833 0.00 0.00 0.00 3.46
3334 3566 4.141642 GGGTATTAGGGTTTAGAAGCGGAA 60.142 45.833 0.00 0.00 0.00 4.30
3335 3567 3.389002 GGGTATTAGGGTTTAGAAGCGGA 59.611 47.826 0.00 0.00 0.00 5.54
3336 3568 3.736720 GGGTATTAGGGTTTAGAAGCGG 58.263 50.000 0.00 0.00 0.00 5.52
3337 3569 3.387397 CGGGTATTAGGGTTTAGAAGCG 58.613 50.000 0.00 0.00 0.00 4.68
3338 3570 3.136763 GCGGGTATTAGGGTTTAGAAGC 58.863 50.000 0.00 0.00 0.00 3.86
3339 3571 4.124970 GTGCGGGTATTAGGGTTTAGAAG 58.875 47.826 0.00 0.00 0.00 2.85
3340 3572 3.118298 GGTGCGGGTATTAGGGTTTAGAA 60.118 47.826 0.00 0.00 0.00 2.10
3341 3573 2.435437 GGTGCGGGTATTAGGGTTTAGA 59.565 50.000 0.00 0.00 0.00 2.10
3342 3574 2.804212 CGGTGCGGGTATTAGGGTTTAG 60.804 54.545 0.00 0.00 0.00 1.85
3343 3575 1.138661 CGGTGCGGGTATTAGGGTTTA 59.861 52.381 0.00 0.00 0.00 2.01
3344 3576 0.107557 CGGTGCGGGTATTAGGGTTT 60.108 55.000 0.00 0.00 0.00 3.27
3345 3577 1.523524 CGGTGCGGGTATTAGGGTT 59.476 57.895 0.00 0.00 0.00 4.11
3346 3578 3.097921 GCGGTGCGGGTATTAGGGT 62.098 63.158 0.00 0.00 0.00 4.34
3347 3579 2.280592 GCGGTGCGGGTATTAGGG 60.281 66.667 0.00 0.00 0.00 3.53
3348 3580 2.280592 GGCGGTGCGGGTATTAGG 60.281 66.667 0.00 0.00 0.00 2.69
3349 3581 2.660552 CGGCGGTGCGGGTATTAG 60.661 66.667 0.00 0.00 0.00 1.73
3350 3582 4.895478 GCGGCGGTGCGGGTATTA 62.895 66.667 9.78 0.00 0.00 0.98
3434 3666 4.265056 AGTGGAACCGGTGGTGGC 62.265 66.667 8.52 0.00 37.80 5.01
3435 3667 2.281484 CAGTGGAACCGGTGGTGG 60.281 66.667 8.52 0.00 37.80 4.61
3436 3668 2.978010 GCAGTGGAACCGGTGGTG 60.978 66.667 8.52 2.41 37.80 4.17
3437 3669 3.168528 AGCAGTGGAACCGGTGGT 61.169 61.111 8.52 0.00 37.80 4.16
3438 3670 2.669569 CAGCAGTGGAACCGGTGG 60.670 66.667 8.52 0.00 37.80 4.61
3439 3671 3.357079 GCAGCAGTGGAACCGGTG 61.357 66.667 8.52 0.00 37.80 4.94
3440 3672 4.988598 CGCAGCAGTGGAACCGGT 62.989 66.667 0.00 0.00 37.80 5.28
3464 3696 2.492090 CGCAAGAGAGACCGGGAG 59.508 66.667 6.32 0.00 43.02 4.30
3465 3697 3.068691 CCGCAAGAGAGACCGGGA 61.069 66.667 6.32 0.00 43.02 5.14
3466 3698 4.821589 GCCGCAAGAGAGACCGGG 62.822 72.222 6.32 0.00 40.98 5.73
3467 3699 3.708220 GAGCCGCAAGAGAGACCGG 62.708 68.421 0.00 0.00 43.38 5.28
3468 3700 2.202676 GAGCCGCAAGAGAGACCG 60.203 66.667 0.00 0.00 43.02 4.79
3469 3701 1.153667 CAGAGCCGCAAGAGAGACC 60.154 63.158 0.00 0.00 43.02 3.85
3470 3702 1.809209 GCAGAGCCGCAAGAGAGAC 60.809 63.158 0.00 0.00 43.02 3.36
3471 3703 1.943116 GAGCAGAGCCGCAAGAGAGA 61.943 60.000 0.00 0.00 43.02 3.10
3472 3704 1.519013 GAGCAGAGCCGCAAGAGAG 60.519 63.158 0.00 0.00 43.02 3.20
3473 3705 1.820010 TTGAGCAGAGCCGCAAGAGA 61.820 55.000 0.00 0.00 43.02 3.10
3474 3706 1.375140 TTGAGCAGAGCCGCAAGAG 60.375 57.895 0.00 0.00 43.02 2.85
3475 3707 1.669115 GTTGAGCAGAGCCGCAAGA 60.669 57.895 0.00 0.00 43.02 3.02
3476 3708 2.684843 GGTTGAGCAGAGCCGCAAG 61.685 63.158 0.00 0.00 0.00 4.01
3477 3709 2.669569 GGTTGAGCAGAGCCGCAA 60.670 61.111 0.00 0.00 0.00 4.85
3478 3710 3.596066 GAGGTTGAGCAGAGCCGCA 62.596 63.158 0.00 0.00 0.00 5.69
3479 3711 2.817396 GAGGTTGAGCAGAGCCGC 60.817 66.667 0.00 0.00 0.00 6.53
3480 3712 2.125350 GGAGGTTGAGCAGAGCCG 60.125 66.667 0.00 0.00 0.00 5.52
3481 3713 2.270527 GGGAGGTTGAGCAGAGCC 59.729 66.667 0.00 0.00 0.00 4.70
3482 3714 2.125350 CGGGAGGTTGAGCAGAGC 60.125 66.667 0.00 0.00 0.00 4.09
3483 3715 2.125350 GCGGGAGGTTGAGCAGAG 60.125 66.667 0.00 0.00 0.00 3.35
3484 3716 2.604686 AGCGGGAGGTTGAGCAGA 60.605 61.111 0.00 0.00 37.18 4.26
3485 3717 2.125350 GAGCGGGAGGTTGAGCAG 60.125 66.667 0.00 0.00 43.00 4.24
3486 3718 4.069232 CGAGCGGGAGGTTGAGCA 62.069 66.667 0.00 0.00 44.43 4.26
3487 3719 3.760035 TCGAGCGGGAGGTTGAGC 61.760 66.667 0.00 0.00 45.22 4.26
3490 3722 2.892425 GCATCGAGCGGGAGGTTG 60.892 66.667 0.00 0.00 43.00 3.77
3494 3726 4.933064 GACGGCATCGAGCGGGAG 62.933 72.222 15.12 4.89 46.82 4.30
3496 3728 4.933064 GAGACGGCATCGAGCGGG 62.933 72.222 15.12 7.01 46.82 6.13
3499 3731 1.142778 GAACAGAGACGGCATCGAGC 61.143 60.000 0.00 0.00 44.65 5.03
3500 3732 0.526524 GGAACAGAGACGGCATCGAG 60.527 60.000 0.00 0.00 40.11 4.04
3501 3733 1.511305 GGAACAGAGACGGCATCGA 59.489 57.895 0.00 0.00 40.11 3.59
3502 3734 1.874019 CGGAACAGAGACGGCATCG 60.874 63.158 0.00 0.00 43.02 3.84
3503 3735 1.519455 CCGGAACAGAGACGGCATC 60.519 63.158 0.00 0.00 41.23 3.91
3504 3736 2.579201 CCGGAACAGAGACGGCAT 59.421 61.111 0.00 0.00 41.23 4.40
3508 3740 2.182030 GGAGCCGGAACAGAGACG 59.818 66.667 5.05 0.00 0.00 4.18
3509 3741 1.668101 ATCGGAGCCGGAACAGAGAC 61.668 60.000 5.05 0.00 40.25 3.36
3510 3742 1.379977 ATCGGAGCCGGAACAGAGA 60.380 57.895 5.05 0.00 40.25 3.10
3511 3743 1.066587 GATCGGAGCCGGAACAGAG 59.933 63.158 5.05 0.00 40.25 3.35
3512 3744 2.771639 CGATCGGAGCCGGAACAGA 61.772 63.158 5.05 4.43 40.25 3.41
3513 3745 2.278857 CGATCGGAGCCGGAACAG 60.279 66.667 5.05 0.00 40.25 3.16
3514 3746 3.833645 CCGATCGGAGCCGGAACA 61.834 66.667 30.62 0.00 43.80 3.18
3515 3747 4.587189 CCCGATCGGAGCCGGAAC 62.587 72.222 35.42 0.00 43.80 3.62
3516 3748 4.826404 TCCCGATCGGAGCCGGAA 62.826 66.667 35.42 8.40 43.80 4.30
3519 3751 3.774959 CTTGTCCCGATCGGAGCCG 62.775 68.421 35.42 18.37 43.19 5.52
3520 3752 2.107141 CTTGTCCCGATCGGAGCC 59.893 66.667 35.42 21.03 43.19 4.70
3521 3753 2.107141 CCTTGTCCCGATCGGAGC 59.893 66.667 35.42 25.06 43.19 4.70
3522 3754 1.736586 CTCCTTGTCCCGATCGGAG 59.263 63.158 35.42 22.97 43.19 4.63
3523 3755 2.423898 GCTCCTTGTCCCGATCGGA 61.424 63.158 35.42 18.23 38.83 4.55
3524 3756 2.032860 ATGCTCCTTGTCCCGATCGG 62.033 60.000 27.65 27.65 0.00 4.18
3525 3757 0.598680 GATGCTCCTTGTCCCGATCG 60.599 60.000 8.51 8.51 0.00 3.69
3526 3758 0.598680 CGATGCTCCTTGTCCCGATC 60.599 60.000 0.00 0.00 0.00 3.69
3527 3759 1.443407 CGATGCTCCTTGTCCCGAT 59.557 57.895 0.00 0.00 0.00 4.18
3528 3760 2.721167 CCGATGCTCCTTGTCCCGA 61.721 63.158 0.00 0.00 0.00 5.14
3529 3761 2.202932 CCGATGCTCCTTGTCCCG 60.203 66.667 0.00 0.00 0.00 5.14
3530 3762 2.514824 GCCGATGCTCCTTGTCCC 60.515 66.667 0.00 0.00 33.53 4.46
3540 3772 1.590259 GAGAAGACGGAGCCGATGC 60.590 63.158 16.83 2.40 42.83 3.91
3541 3773 1.066587 GGAGAAGACGGAGCCGATG 59.933 63.158 16.83 0.00 42.83 3.84
3542 3774 1.379977 TGGAGAAGACGGAGCCGAT 60.380 57.895 16.83 0.54 42.83 4.18
3543 3775 2.035155 TGGAGAAGACGGAGCCGA 59.965 61.111 16.83 0.00 42.83 5.54
3544 3776 2.182030 GTGGAGAAGACGGAGCCG 59.818 66.667 7.48 7.48 46.03 5.52
3545 3777 2.182030 CGTGGAGAAGACGGAGCC 59.818 66.667 0.00 0.00 33.08 4.70
3546 3778 2.507324 GCGTGGAGAAGACGGAGC 60.507 66.667 0.00 0.00 37.30 4.70
3547 3779 2.182030 GGCGTGGAGAAGACGGAG 59.818 66.667 0.00 0.00 37.30 4.63
3548 3780 3.744719 CGGCGTGGAGAAGACGGA 61.745 66.667 0.00 0.00 37.30 4.69
3577 3809 4.681978 ACGAGGTCACGCCCAAGC 62.682 66.667 0.00 0.00 38.26 4.01
3578 3810 2.738521 CACGAGGTCACGCCCAAG 60.739 66.667 0.00 0.00 38.26 3.61
3579 3811 4.308458 CCACGAGGTCACGCCCAA 62.308 66.667 0.00 0.00 38.26 4.12


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.