Multiple sequence alignment - TraesCS3B01G125400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G125400 chr3B 100.000 4727 0 0 1 4727 100964674 100969400 0.000000e+00 8730
1 TraesCS3B01G125400 chr3B 98.684 152 2 0 3635 3786 817065191 817065040 2.170000e-68 270
2 TraesCS3B01G125400 chr3D 95.620 3242 117 17 403 3634 62067207 62070433 0.000000e+00 5177
3 TraesCS3B01G125400 chr3D 91.548 840 26 16 3782 4615 62070422 62071222 0.000000e+00 1116
4 TraesCS3B01G125400 chr3A 92.154 3594 175 48 78 3634 71145689 71149212 0.000000e+00 4975
5 TraesCS3B01G125400 chr3A 95.269 613 11 6 3782 4377 71149201 71149812 0.000000e+00 955
6 TraesCS3B01G125400 chr3A 88.285 239 12 4 4379 4615 71149846 71150070 6.030000e-69 272
7 TraesCS3B01G125400 chr2A 88.904 757 61 13 1938 2685 610179279 610178537 0.000000e+00 911
8 TraesCS3B01G125400 chr2A 99.355 155 1 0 3633 3787 118674175 118674021 1.000000e-71 281
9 TraesCS3B01G125400 chr6B 86.579 760 72 14 1935 2683 661997942 661998682 0.000000e+00 811
10 TraesCS3B01G125400 chr6B 82.650 732 81 25 2702 3411 578650458 578651165 1.450000e-169 606
11 TraesCS3B01G125400 chr6B 96.933 163 4 1 3633 3794 164032140 164031978 6.030000e-69 272
12 TraesCS3B01G125400 chr7A 99.346 153 1 0 3632 3784 226759041 226759193 1.300000e-70 278
13 TraesCS3B01G125400 chr7A 98.693 153 2 0 3634 3786 219852832 219852984 6.030000e-69 272
14 TraesCS3B01G125400 chr1A 99.346 153 1 0 3632 3784 488623623 488623775 1.300000e-70 278
15 TraesCS3B01G125400 chr6A 98.693 153 2 0 3632 3784 600302048 600302200 6.030000e-69 272
16 TraesCS3B01G125400 chr4D 98.667 150 2 0 3635 3784 498575301 498575152 2.800000e-67 267
17 TraesCS3B01G125400 chr4B 98.667 150 2 0 3635 3784 189153338 189153189 2.800000e-67 267


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G125400 chr3B 100964674 100969400 4726 False 8730.000000 8730 100.000000 1 4727 1 chr3B.!!$F1 4726
1 TraesCS3B01G125400 chr3D 62067207 62071222 4015 False 3146.500000 5177 93.584000 403 4615 2 chr3D.!!$F1 4212
2 TraesCS3B01G125400 chr3A 71145689 71150070 4381 False 2067.333333 4975 91.902667 78 4615 3 chr3A.!!$F1 4537
3 TraesCS3B01G125400 chr2A 610178537 610179279 742 True 911.000000 911 88.904000 1938 2685 1 chr2A.!!$R2 747
4 TraesCS3B01G125400 chr6B 661997942 661998682 740 False 811.000000 811 86.579000 1935 2683 1 chr6B.!!$F2 748
5 TraesCS3B01G125400 chr6B 578650458 578651165 707 False 606.000000 606 82.650000 2702 3411 1 chr6B.!!$F1 709

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
68 69 0.108329 ATACCACTCGCGGACCAAAG 60.108 55.0 6.13 0.0 0.00 2.77 F
144 145 0.249120 CTGCGGTCACTATGGTGGAA 59.751 55.0 9.56 0.0 43.17 3.53 F
1226 1250 0.461516 GATTCCCCGTCCCTTCGTTC 60.462 60.0 0.00 0.0 0.00 3.95 F
1300 1324 0.596577 GGGGTTTCCGTTTGCTCTTC 59.403 55.0 0.00 0.0 0.00 2.87 F
1917 1949 0.874607 CAGCGCTCATAACGTACCCC 60.875 60.0 7.13 0.0 0.00 4.95 F
3243 3315 0.388520 GGACGCTGATTTTTGTGGGC 60.389 55.0 0.00 0.0 0.00 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2060 2092 0.179234 TTGTGAAGCAACAGGGACGA 59.821 50.000 0.00 0.00 31.07 4.20 R
2137 2169 7.120873 AGCAGATGATCATGTAAAATATGGAGC 59.879 37.037 14.30 4.72 0.00 4.70 R
2401 2442 1.033746 CCATGCACATCACAGACCCC 61.034 60.000 0.00 0.00 0.00 4.95 R
3149 3219 1.168714 GGTTGATGAACTGGGTGAGC 58.831 55.000 0.00 0.00 32.15 4.26 R
3635 3707 0.039074 GTCGTCTGTGTAGCAGCACT 60.039 55.000 11.09 0.00 44.66 4.40 R
4638 4758 0.035152 ATGGCTTGATCTTGGTCGCA 60.035 50.000 0.00 0.00 0.00 5.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.711711 GCCATCATCTCATTGCCGT 58.288 52.632 0.00 0.00 0.00 5.68
19 20 0.590195 GCCATCATCTCATTGCCGTC 59.410 55.000 0.00 0.00 0.00 4.79
20 21 0.863799 CCATCATCTCATTGCCGTCG 59.136 55.000 0.00 0.00 0.00 5.12
21 22 0.863799 CATCATCTCATTGCCGTCGG 59.136 55.000 6.99 6.99 0.00 4.79
22 23 0.465705 ATCATCTCATTGCCGTCGGT 59.534 50.000 13.94 0.00 0.00 4.69
23 24 0.179111 TCATCTCATTGCCGTCGGTC 60.179 55.000 13.94 5.94 0.00 4.79
24 25 1.226974 ATCTCATTGCCGTCGGTCG 60.227 57.895 13.94 0.00 39.52 4.79
36 37 4.323477 CGGTCGGCAACCCCTGAA 62.323 66.667 2.19 0.00 46.27 3.02
37 38 2.355115 GGTCGGCAACCCCTGAAT 59.645 61.111 0.00 0.00 42.85 2.57
38 39 1.304134 GGTCGGCAACCCCTGAATT 60.304 57.895 0.00 0.00 42.85 2.17
39 40 1.595093 GGTCGGCAACCCCTGAATTG 61.595 60.000 0.00 0.00 42.85 2.32
40 41 0.893727 GTCGGCAACCCCTGAATTGT 60.894 55.000 0.00 0.00 0.00 2.71
41 42 0.178975 TCGGCAACCCCTGAATTGTT 60.179 50.000 0.00 0.00 0.00 2.83
42 43 0.243636 CGGCAACCCCTGAATTGTTC 59.756 55.000 0.00 0.00 0.00 3.18
43 44 1.632589 GGCAACCCCTGAATTGTTCT 58.367 50.000 0.00 0.00 0.00 3.01
44 45 1.970640 GGCAACCCCTGAATTGTTCTT 59.029 47.619 0.00 0.00 0.00 2.52
45 46 3.161866 GGCAACCCCTGAATTGTTCTTA 58.838 45.455 0.00 0.00 0.00 2.10
46 47 3.056821 GGCAACCCCTGAATTGTTCTTAC 60.057 47.826 0.00 0.00 0.00 2.34
47 48 3.056821 GCAACCCCTGAATTGTTCTTACC 60.057 47.826 0.00 0.00 0.00 2.85
48 49 4.407365 CAACCCCTGAATTGTTCTTACCT 58.593 43.478 0.00 0.00 0.00 3.08
49 50 5.566469 CAACCCCTGAATTGTTCTTACCTA 58.434 41.667 0.00 0.00 0.00 3.08
50 51 6.187682 CAACCCCTGAATTGTTCTTACCTAT 58.812 40.000 0.00 0.00 0.00 2.57
51 52 7.343357 CAACCCCTGAATTGTTCTTACCTATA 58.657 38.462 0.00 0.00 0.00 1.31
52 53 6.896883 ACCCCTGAATTGTTCTTACCTATAC 58.103 40.000 0.00 0.00 0.00 1.47
53 54 6.126565 ACCCCTGAATTGTTCTTACCTATACC 60.127 42.308 0.00 0.00 0.00 2.73
54 55 6.126594 CCCCTGAATTGTTCTTACCTATACCA 60.127 42.308 0.00 0.00 0.00 3.25
55 56 6.766467 CCCTGAATTGTTCTTACCTATACCAC 59.234 42.308 0.00 0.00 0.00 4.16
56 57 7.365652 CCCTGAATTGTTCTTACCTATACCACT 60.366 40.741 0.00 0.00 0.00 4.00
57 58 7.711339 CCTGAATTGTTCTTACCTATACCACTC 59.289 40.741 0.00 0.00 0.00 3.51
58 59 7.262772 TGAATTGTTCTTACCTATACCACTCG 58.737 38.462 0.00 0.00 0.00 4.18
59 60 4.644103 TGTTCTTACCTATACCACTCGC 57.356 45.455 0.00 0.00 0.00 5.03
60 61 3.065786 TGTTCTTACCTATACCACTCGCG 59.934 47.826 0.00 0.00 0.00 5.87
61 62 2.224606 TCTTACCTATACCACTCGCGG 58.775 52.381 6.13 0.00 0.00 6.46
62 63 2.158769 TCTTACCTATACCACTCGCGGA 60.159 50.000 6.13 0.00 0.00 5.54
63 64 1.597742 TACCTATACCACTCGCGGAC 58.402 55.000 6.13 0.00 0.00 4.79
64 65 1.105759 ACCTATACCACTCGCGGACC 61.106 60.000 6.13 0.00 0.00 4.46
65 66 1.105167 CCTATACCACTCGCGGACCA 61.105 60.000 6.13 0.00 0.00 4.02
66 67 0.742505 CTATACCACTCGCGGACCAA 59.257 55.000 6.13 0.00 0.00 3.67
67 68 1.135527 CTATACCACTCGCGGACCAAA 59.864 52.381 6.13 0.00 0.00 3.28
68 69 0.108329 ATACCACTCGCGGACCAAAG 60.108 55.000 6.13 0.00 0.00 2.77
69 70 2.775032 TACCACTCGCGGACCAAAGC 62.775 60.000 6.13 0.00 0.00 3.51
70 71 3.423154 CACTCGCGGACCAAAGCC 61.423 66.667 6.13 0.00 0.00 4.35
71 72 3.626924 ACTCGCGGACCAAAGCCT 61.627 61.111 6.13 0.00 0.00 4.58
72 73 2.358737 CTCGCGGACCAAAGCCTT 60.359 61.111 6.13 0.00 0.00 4.35
73 74 2.668212 TCGCGGACCAAAGCCTTG 60.668 61.111 6.13 0.00 0.00 3.61
85 86 4.115199 GCCTTGGGGTCCGCATCT 62.115 66.667 9.81 0.00 34.45 2.90
86 87 2.190578 CCTTGGGGTCCGCATCTC 59.809 66.667 9.81 0.00 0.00 2.75
92 93 3.917760 GGTCCGCATCTCCTCCCG 61.918 72.222 0.00 0.00 0.00 5.14
98 99 2.415608 GCATCTCCTCCCGTCGTCA 61.416 63.158 0.00 0.00 0.00 4.35
111 112 1.201877 CGTCGTCAAAGCGGTAAATGG 60.202 52.381 0.00 0.00 0.00 3.16
112 113 2.070783 GTCGTCAAAGCGGTAAATGGA 58.929 47.619 0.00 0.00 0.00 3.41
138 139 2.203070 GGGCCTGCGGTCACTATG 60.203 66.667 0.84 0.00 0.00 2.23
144 145 0.249120 CTGCGGTCACTATGGTGGAA 59.751 55.000 9.56 0.00 43.17 3.53
155 156 4.164221 CACTATGGTGGAAGTGGGTAGATT 59.836 45.833 0.32 0.00 39.55 2.40
157 158 2.626785 TGGTGGAAGTGGGTAGATTGA 58.373 47.619 0.00 0.00 0.00 2.57
163 164 3.453559 GTGGGTAGATTGACCACCG 57.546 57.895 0.00 0.00 46.90 4.94
165 166 1.153229 GGGTAGATTGACCACCGCC 60.153 63.158 0.00 0.00 41.73 6.13
166 167 1.153229 GGTAGATTGACCACCGCCC 60.153 63.158 0.00 0.00 39.51 6.13
177 181 1.182385 CCACCGCCCTTTTTGCCTTA 61.182 55.000 0.00 0.00 0.00 2.69
182 186 2.433436 CGCCCTTTTTGCCTTAGTAGT 58.567 47.619 0.00 0.00 0.00 2.73
193 197 5.399052 TGCCTTAGTAGTGATAGTAGGGT 57.601 43.478 0.00 0.00 0.00 4.34
199 203 7.014422 CCTTAGTAGTGATAGTAGGGTGGAAAG 59.986 44.444 0.00 0.00 0.00 2.62
223 227 3.136626 ACCCTTCATAGCTCCATAACCAC 59.863 47.826 0.00 0.00 0.00 4.16
233 237 5.574188 AGCTCCATAACCACTTGATCTTTT 58.426 37.500 0.00 0.00 0.00 2.27
234 238 6.012745 AGCTCCATAACCACTTGATCTTTTT 58.987 36.000 0.00 0.00 0.00 1.94
238 242 9.231297 CTCCATAACCACTTGATCTTTTTAAGA 57.769 33.333 0.00 0.00 42.69 2.10
244 248 9.847224 AACCACTTGATCTTTTTAAGAACTAGA 57.153 29.630 12.40 0.00 41.63 2.43
275 279 6.762702 TGTCATAATGTCTAAGTACGTCCA 57.237 37.500 0.00 0.00 0.00 4.02
279 283 4.771590 AATGTCTAAGTACGTCCAACGA 57.228 40.909 6.48 0.00 46.05 3.85
280 284 3.818961 TGTCTAAGTACGTCCAACGAG 57.181 47.619 6.48 0.00 46.05 4.18
281 285 3.141398 TGTCTAAGTACGTCCAACGAGT 58.859 45.455 6.48 0.00 46.05 4.18
284 288 5.106948 TGTCTAAGTACGTCCAACGAGTAAG 60.107 44.000 6.48 0.00 46.05 2.34
299 303 7.094549 CCAACGAGTAAGAATTCCATGGTAAAA 60.095 37.037 12.58 0.00 0.00 1.52
303 307 8.458843 CGAGTAAGAATTCCATGGTAAAAATGT 58.541 33.333 12.58 0.00 0.00 2.71
336 348 6.706716 TGCCATGCATGTAAAATTCCATAATG 59.293 34.615 24.58 5.15 31.71 1.90
338 350 7.117236 GCCATGCATGTAAAATTCCATAATGAG 59.883 37.037 24.58 4.45 0.00 2.90
340 352 7.894753 TGCATGTAAAATTCCATAATGAGGA 57.105 32.000 0.00 0.00 0.00 3.71
384 397 7.866729 TCGAAGTAATTTGAATACAGTTGCAA 58.133 30.769 0.00 0.00 0.00 4.08
398 411 4.083324 ACAGTTGCAAGACACATAATTCCG 60.083 41.667 0.00 0.00 0.00 4.30
488 501 5.163055 ACCTATGTGTAAGCATCCATCCATT 60.163 40.000 0.00 0.00 0.00 3.16
493 506 5.589855 TGTGTAAGCATCCATCCATTAGTTG 59.410 40.000 0.00 0.00 0.00 3.16
501 514 6.567050 CATCCATCCATTAGTTGTGAAAAGG 58.433 40.000 0.00 0.00 0.00 3.11
548 562 8.438676 AACACTAAGATTGTATGGCTCATAAC 57.561 34.615 0.00 0.00 0.00 1.89
555 569 8.353423 AGATTGTATGGCTCATAACTTTTTGT 57.647 30.769 0.00 0.00 0.00 2.83
556 570 8.246180 AGATTGTATGGCTCATAACTTTTTGTG 58.754 33.333 0.00 0.00 0.00 3.33
559 573 7.367285 TGTATGGCTCATAACTTTTTGTGAAC 58.633 34.615 0.00 0.00 32.94 3.18
560 574 6.655078 ATGGCTCATAACTTTTTGTGAACT 57.345 33.333 0.00 0.00 32.94 3.01
561 575 7.759489 ATGGCTCATAACTTTTTGTGAACTA 57.241 32.000 0.00 0.00 32.94 2.24
562 576 7.202016 TGGCTCATAACTTTTTGTGAACTAG 57.798 36.000 0.00 0.00 32.94 2.57
563 577 6.206634 TGGCTCATAACTTTTTGTGAACTAGG 59.793 38.462 0.00 0.00 32.94 3.02
564 578 6.086871 GCTCATAACTTTTTGTGAACTAGGC 58.913 40.000 0.00 0.00 32.94 3.93
565 579 6.293955 GCTCATAACTTTTTGTGAACTAGGCA 60.294 38.462 0.00 0.00 32.94 4.75
566 580 7.575414 TCATAACTTTTTGTGAACTAGGCAA 57.425 32.000 0.00 0.00 30.50 4.52
771 788 1.244019 ATCCACGCTTTCACAAGGCC 61.244 55.000 0.00 0.00 0.00 5.19
799 816 1.149627 AAAACGCTAGGGCCACACA 59.850 52.632 6.18 0.00 34.44 3.72
807 824 0.840617 TAGGGCCACACACAGTTCAA 59.159 50.000 6.18 0.00 0.00 2.69
891 908 3.881937 TCTAAAAACTAGTCTCCGGCC 57.118 47.619 0.00 0.00 0.00 6.13
898 915 2.856039 CTAGTCTCCGGCCTGTCCCA 62.856 65.000 0.00 0.00 0.00 4.37
1058 1075 2.277628 GAAGAGGCGAGCGACGAG 60.278 66.667 0.00 0.00 45.77 4.18
1083 1103 1.151413 AGGAGGAGGAGGTTGTTGGTA 59.849 52.381 0.00 0.00 0.00 3.25
1105 1125 2.234908 GGCTGTTGAGAGGAAGCTTCTA 59.765 50.000 25.05 5.29 35.93 2.10
1214 1238 4.202050 CGGTTCTTGATTGATTGATTCCCC 60.202 45.833 0.00 0.00 0.00 4.81
1215 1239 4.202050 GGTTCTTGATTGATTGATTCCCCG 60.202 45.833 0.00 0.00 0.00 5.73
1216 1240 4.235079 TCTTGATTGATTGATTCCCCGT 57.765 40.909 0.00 0.00 0.00 5.28
1220 1244 1.295020 TTGATTGATTCCCCGTCCCT 58.705 50.000 0.00 0.00 0.00 4.20
1224 1248 1.196104 TTGATTCCCCGTCCCTTCGT 61.196 55.000 0.00 0.00 0.00 3.85
1226 1250 0.461516 GATTCCCCGTCCCTTCGTTC 60.462 60.000 0.00 0.00 0.00 3.95
1230 1254 2.718073 CCCGTCCCTTCGTTCCGAT 61.718 63.158 0.00 0.00 35.23 4.18
1247 1271 3.301222 ATGGCGGGGGCATTCTTGT 62.301 57.895 0.00 0.00 46.61 3.16
1300 1324 0.596577 GGGGTTTCCGTTTGCTCTTC 59.403 55.000 0.00 0.00 0.00 2.87
1328 1352 1.674322 CTGTTAGGGTGGTTGGGCG 60.674 63.158 0.00 0.00 0.00 6.13
1338 1366 2.436824 GTTGGGCGGAGGAGCTTC 60.437 66.667 0.00 0.00 37.29 3.86
1425 1456 4.392940 AGGATGCTATGCCAGATTGTTAC 58.607 43.478 0.00 0.00 0.00 2.50
1507 1538 1.465794 GTGGCCGGGCTTGTTATTTA 58.534 50.000 29.87 1.49 0.00 1.40
1519 1550 6.183360 GGGCTTGTTATTTATTCTGTCAGACC 60.183 42.308 0.78 0.00 0.00 3.85
1606 1637 9.700831 ATCAGGCTTAGAATTTGGTACTATTTT 57.299 29.630 0.00 0.00 0.00 1.82
1607 1638 9.528489 TCAGGCTTAGAATTTGGTACTATTTTT 57.472 29.630 0.00 0.00 0.00 1.94
1737 1769 3.305403 GGCTGTTTTACCAAGGAAGAAGC 60.305 47.826 0.00 0.00 0.00 3.86
1747 1779 3.828451 CCAAGGAAGAAGCATTTCTGGAA 59.172 43.478 0.00 0.00 42.80 3.53
1775 1807 6.133356 GGTCAATTGGGGATGGTCTAAATTA 58.867 40.000 5.42 0.00 0.00 1.40
1780 1812 8.362639 CAATTGGGGATGGTCTAAATTAGAATG 58.637 37.037 4.04 0.00 36.40 2.67
1782 1814 5.435041 TGGGGATGGTCTAAATTAGAATGGT 59.565 40.000 4.04 0.00 36.40 3.55
1862 1894 3.589988 CTGTGAGAACAAGATACGGCTT 58.410 45.455 0.00 0.00 0.00 4.35
1878 1910 4.890088 ACGGCTTTGTATCTGTTTCTGTA 58.110 39.130 0.00 0.00 0.00 2.74
1887 1919 4.585955 ATCTGTTTCTGTATACGGCGAT 57.414 40.909 16.62 5.41 0.00 4.58
1917 1949 0.874607 CAGCGCTCATAACGTACCCC 60.875 60.000 7.13 0.00 0.00 4.95
1965 1997 2.820787 TCGTTTTCTTTGTGGTTGGTGT 59.179 40.909 0.00 0.00 0.00 4.16
2137 2169 4.767478 AGGTCAGTCATCATCATCTGTTG 58.233 43.478 0.00 0.00 0.00 3.33
2192 2232 2.161609 CCTCCGGTTCTTACATGTTTGC 59.838 50.000 2.30 0.00 0.00 3.68
2227 2267 1.714794 CTGTCTTACAGTTGGGAGCG 58.285 55.000 0.00 0.00 41.19 5.03
2269 2309 6.806751 TGTACCTGAGCTATCTGTTGATAAC 58.193 40.000 0.00 0.00 35.04 1.89
2349 2390 9.971922 ATTGGCTTACTTTTTATCATATTCTGC 57.028 29.630 0.00 0.00 0.00 4.26
2458 2501 0.949105 ACGTGCTTACCCTCTTTGCG 60.949 55.000 0.00 0.00 0.00 4.85
3173 3245 2.304180 CACCCAGTTCATCAACCTCTCT 59.696 50.000 0.00 0.00 32.22 3.10
3243 3315 0.388520 GGACGCTGATTTTTGTGGGC 60.389 55.000 0.00 0.00 0.00 5.36
3303 3375 6.323996 TGACCACAAAACTAGATCGGAGATAT 59.676 38.462 0.00 0.00 45.12 1.63
3452 3524 3.005539 ACCGAGGAGCAGCCACAT 61.006 61.111 0.00 0.00 40.02 3.21
3560 3632 1.227527 CCCGTTCTGCATATCGCCA 60.228 57.895 0.00 0.00 41.33 5.69
3634 3706 2.422093 GGGCCTCCCTCATTGTCTAAAG 60.422 54.545 0.84 0.00 41.34 1.85
3635 3707 2.505819 GGCCTCCCTCATTGTCTAAAGA 59.494 50.000 0.00 0.00 0.00 2.52
3636 3708 3.432890 GGCCTCCCTCATTGTCTAAAGAG 60.433 52.174 0.00 0.00 32.77 2.85
3637 3709 3.198853 GCCTCCCTCATTGTCTAAAGAGT 59.801 47.826 0.00 0.00 31.42 3.24
3638 3710 4.764172 CCTCCCTCATTGTCTAAAGAGTG 58.236 47.826 0.00 0.00 31.42 3.51
3639 3711 4.187694 CTCCCTCATTGTCTAAAGAGTGC 58.812 47.826 0.00 0.00 31.42 4.40
3640 3712 3.840666 TCCCTCATTGTCTAAAGAGTGCT 59.159 43.478 0.00 0.00 31.42 4.40
3641 3713 3.937706 CCCTCATTGTCTAAAGAGTGCTG 59.062 47.826 0.00 0.00 31.42 4.41
3642 3714 3.373439 CCTCATTGTCTAAAGAGTGCTGC 59.627 47.826 0.00 0.00 31.42 5.25
3643 3715 4.252073 CTCATTGTCTAAAGAGTGCTGCT 58.748 43.478 0.00 0.00 29.38 4.24
3644 3716 5.405935 TCATTGTCTAAAGAGTGCTGCTA 57.594 39.130 0.00 0.00 0.00 3.49
3645 3717 5.171476 TCATTGTCTAAAGAGTGCTGCTAC 58.829 41.667 0.00 0.00 0.00 3.58
3646 3718 4.600692 TTGTCTAAAGAGTGCTGCTACA 57.399 40.909 0.00 0.00 0.00 2.74
3647 3719 3.914312 TGTCTAAAGAGTGCTGCTACAC 58.086 45.455 0.00 1.90 41.02 2.90
3648 3720 3.320826 TGTCTAAAGAGTGCTGCTACACA 59.679 43.478 11.44 0.00 43.23 3.72
3657 3729 3.351450 TGCTACACAGACGACGCT 58.649 55.556 0.00 0.00 0.00 5.07
3658 3730 1.081442 TGCTACACAGACGACGCTG 60.081 57.895 14.87 14.87 41.63 5.18
3659 3731 2.437343 GCTACACAGACGACGCTGC 61.437 63.158 15.95 0.00 39.51 5.25
3660 3732 1.081442 CTACACAGACGACGCTGCA 60.081 57.895 15.95 0.00 39.51 4.41
3661 3733 0.456824 CTACACAGACGACGCTGCAT 60.457 55.000 15.95 9.09 39.51 3.96
3662 3734 0.806241 TACACAGACGACGCTGCATA 59.194 50.000 15.95 8.34 39.51 3.14
3663 3735 0.456824 ACACAGACGACGCTGCATAG 60.457 55.000 15.95 8.64 39.51 2.23
3664 3736 1.517257 ACAGACGACGCTGCATAGC 60.517 57.895 15.95 0.00 46.62 2.97
3673 3745 3.557207 GCTGCATAGCCGATTTTGG 57.443 52.632 0.00 0.00 44.33 3.28
3674 3746 0.031178 GCTGCATAGCCGATTTTGGG 59.969 55.000 0.00 0.00 44.33 4.12
3675 3747 1.679139 CTGCATAGCCGATTTTGGGA 58.321 50.000 0.00 0.00 0.00 4.37
3676 3748 1.334869 CTGCATAGCCGATTTTGGGAC 59.665 52.381 0.00 0.00 0.00 4.46
3677 3749 0.307760 GCATAGCCGATTTTGGGACG 59.692 55.000 0.00 0.00 0.00 4.79
3678 3750 1.948104 CATAGCCGATTTTGGGACGA 58.052 50.000 0.00 0.00 0.00 4.20
3679 3751 1.597663 CATAGCCGATTTTGGGACGAC 59.402 52.381 0.00 0.00 0.00 4.34
3680 3752 0.609151 TAGCCGATTTTGGGACGACA 59.391 50.000 0.00 0.00 0.00 4.35
3681 3753 0.953960 AGCCGATTTTGGGACGACAC 60.954 55.000 0.00 0.00 0.00 3.67
3682 3754 0.953960 GCCGATTTTGGGACGACACT 60.954 55.000 0.00 0.00 0.00 3.55
3683 3755 1.673626 GCCGATTTTGGGACGACACTA 60.674 52.381 0.00 0.00 0.00 2.74
3684 3756 2.901249 CCGATTTTGGGACGACACTAT 58.099 47.619 0.00 0.00 0.00 2.12
3685 3757 2.864343 CCGATTTTGGGACGACACTATC 59.136 50.000 0.00 0.00 0.00 2.08
3686 3758 3.517602 CGATTTTGGGACGACACTATCA 58.482 45.455 0.00 0.00 0.00 2.15
3687 3759 3.930229 CGATTTTGGGACGACACTATCAA 59.070 43.478 0.00 0.00 0.00 2.57
3688 3760 4.570772 CGATTTTGGGACGACACTATCAAT 59.429 41.667 0.00 0.00 0.00 2.57
3689 3761 5.276868 CGATTTTGGGACGACACTATCAATC 60.277 44.000 0.00 0.00 0.00 2.67
3690 3762 4.545208 TTTGGGACGACACTATCAATCA 57.455 40.909 0.00 0.00 0.00 2.57
3691 3763 4.545208 TTGGGACGACACTATCAATCAA 57.455 40.909 0.00 0.00 0.00 2.57
3692 3764 4.545208 TGGGACGACACTATCAATCAAA 57.455 40.909 0.00 0.00 0.00 2.69
3693 3765 4.250464 TGGGACGACACTATCAATCAAAC 58.750 43.478 0.00 0.00 0.00 2.93
3694 3766 3.621715 GGGACGACACTATCAATCAAACC 59.378 47.826 0.00 0.00 0.00 3.27
3695 3767 4.250464 GGACGACACTATCAATCAAACCA 58.750 43.478 0.00 0.00 0.00 3.67
3696 3768 4.876107 GGACGACACTATCAATCAAACCAT 59.124 41.667 0.00 0.00 0.00 3.55
3697 3769 5.006746 GGACGACACTATCAATCAAACCATC 59.993 44.000 0.00 0.00 0.00 3.51
3698 3770 4.876107 ACGACACTATCAATCAAACCATCC 59.124 41.667 0.00 0.00 0.00 3.51
3699 3771 4.875536 CGACACTATCAATCAAACCATCCA 59.124 41.667 0.00 0.00 0.00 3.41
3700 3772 5.528690 CGACACTATCAATCAAACCATCCAT 59.471 40.000 0.00 0.00 0.00 3.41
3701 3773 6.512253 CGACACTATCAATCAAACCATCCATG 60.512 42.308 0.00 0.00 0.00 3.66
3702 3774 5.068198 ACACTATCAATCAAACCATCCATGC 59.932 40.000 0.00 0.00 0.00 4.06
3703 3775 5.068067 CACTATCAATCAAACCATCCATGCA 59.932 40.000 0.00 0.00 0.00 3.96
3704 3776 4.665833 ATCAATCAAACCATCCATGCAG 57.334 40.909 0.00 0.00 0.00 4.41
3705 3777 3.699413 TCAATCAAACCATCCATGCAGA 58.301 40.909 0.00 0.00 0.00 4.26
3706 3778 3.697542 TCAATCAAACCATCCATGCAGAG 59.302 43.478 0.00 0.00 0.00 3.35
3707 3779 2.133281 TCAAACCATCCATGCAGAGG 57.867 50.000 1.59 1.59 0.00 3.69
3708 3780 1.634973 TCAAACCATCCATGCAGAGGA 59.365 47.619 12.56 12.56 39.97 3.71
3709 3781 2.242965 TCAAACCATCCATGCAGAGGAT 59.757 45.455 15.72 15.72 46.61 3.24
3710 3782 3.459227 TCAAACCATCCATGCAGAGGATA 59.541 43.478 19.72 4.45 43.90 2.59
3711 3783 4.079844 TCAAACCATCCATGCAGAGGATAA 60.080 41.667 19.72 0.00 43.90 1.75
3712 3784 4.524802 AACCATCCATGCAGAGGATAAA 57.475 40.909 19.72 0.00 43.90 1.40
3713 3785 3.825328 ACCATCCATGCAGAGGATAAAC 58.175 45.455 19.72 0.00 43.90 2.01
3714 3786 3.461085 ACCATCCATGCAGAGGATAAACT 59.539 43.478 19.72 0.07 43.90 2.66
3715 3787 3.819337 CCATCCATGCAGAGGATAAACTG 59.181 47.826 19.72 10.96 43.90 3.16
3716 3788 4.458397 CATCCATGCAGAGGATAAACTGT 58.542 43.478 19.72 0.00 43.90 3.55
3717 3789 5.455183 CCATCCATGCAGAGGATAAACTGTA 60.455 44.000 19.72 0.00 43.90 2.74
3718 3790 5.282055 TCCATGCAGAGGATAAACTGTAG 57.718 43.478 6.58 0.00 36.62 2.74
3719 3791 3.812053 CCATGCAGAGGATAAACTGTAGC 59.188 47.826 1.80 0.00 36.62 3.58
3720 3792 4.445453 CATGCAGAGGATAAACTGTAGCA 58.555 43.478 0.00 0.00 36.62 3.49
3721 3793 3.861840 TGCAGAGGATAAACTGTAGCAC 58.138 45.455 0.00 0.00 36.62 4.40
3722 3794 3.260632 TGCAGAGGATAAACTGTAGCACA 59.739 43.478 0.00 0.00 36.62 4.57
3723 3795 4.253685 GCAGAGGATAAACTGTAGCACAA 58.746 43.478 0.00 0.00 36.62 3.33
3724 3796 4.093556 GCAGAGGATAAACTGTAGCACAAC 59.906 45.833 0.00 0.00 36.62 3.32
3725 3797 4.631813 CAGAGGATAAACTGTAGCACAACC 59.368 45.833 0.00 0.00 0.00 3.77
3726 3798 4.286032 AGAGGATAAACTGTAGCACAACCA 59.714 41.667 0.00 0.00 0.00 3.67
3727 3799 5.045578 AGAGGATAAACTGTAGCACAACCAT 60.046 40.000 0.00 0.00 0.00 3.55
3728 3800 5.570320 AGGATAAACTGTAGCACAACCATT 58.430 37.500 0.00 0.00 0.00 3.16
3729 3801 5.415701 AGGATAAACTGTAGCACAACCATTG 59.584 40.000 0.00 0.00 0.00 2.82
3730 3802 5.393027 GGATAAACTGTAGCACAACCATTGG 60.393 44.000 0.00 0.00 34.12 3.16
3731 3803 2.949177 ACTGTAGCACAACCATTGGA 57.051 45.000 10.37 0.00 34.12 3.53
3732 3804 3.439857 ACTGTAGCACAACCATTGGAT 57.560 42.857 10.37 0.00 34.12 3.41
3733 3805 3.084039 ACTGTAGCACAACCATTGGATG 58.916 45.455 10.37 10.80 34.12 3.51
3734 3806 3.084039 CTGTAGCACAACCATTGGATGT 58.916 45.455 12.47 12.47 39.28 3.06
3735 3807 4.260985 CTGTAGCACAACCATTGGATGTA 58.739 43.478 17.19 0.98 36.57 2.29
3736 3808 4.260985 TGTAGCACAACCATTGGATGTAG 58.739 43.478 17.19 12.76 36.57 2.74
3737 3809 3.439857 AGCACAACCATTGGATGTAGT 57.560 42.857 17.19 6.01 36.57 2.73
3738 3810 3.084039 AGCACAACCATTGGATGTAGTG 58.916 45.455 17.19 13.45 36.57 2.74
3739 3811 2.819608 GCACAACCATTGGATGTAGTGT 59.180 45.455 17.19 5.05 36.57 3.55
3740 3812 3.119849 GCACAACCATTGGATGTAGTGTC 60.120 47.826 17.19 2.98 36.57 3.67
3741 3813 3.125146 CACAACCATTGGATGTAGTGTCG 59.875 47.826 17.19 1.97 36.57 4.35
3742 3814 3.244422 ACAACCATTGGATGTAGTGTCGT 60.244 43.478 16.24 0.00 36.95 4.34
3743 3815 3.247006 ACCATTGGATGTAGTGTCGTC 57.753 47.619 10.37 0.00 0.00 4.20
3744 3816 2.832129 ACCATTGGATGTAGTGTCGTCT 59.168 45.455 10.37 0.00 0.00 4.18
3745 3817 3.119101 ACCATTGGATGTAGTGTCGTCTC 60.119 47.826 10.37 0.00 0.00 3.36
3746 3818 3.448686 CATTGGATGTAGTGTCGTCTCC 58.551 50.000 0.00 0.00 0.00 3.71
3747 3819 2.209690 TGGATGTAGTGTCGTCTCCA 57.790 50.000 0.00 0.00 0.00 3.86
3748 3820 2.521126 TGGATGTAGTGTCGTCTCCAA 58.479 47.619 0.00 0.00 30.15 3.53
3749 3821 2.894765 TGGATGTAGTGTCGTCTCCAAA 59.105 45.455 0.00 0.00 30.15 3.28
3750 3822 3.513912 TGGATGTAGTGTCGTCTCCAAAT 59.486 43.478 0.00 0.00 30.15 2.32
3751 3823 4.113354 GGATGTAGTGTCGTCTCCAAATC 58.887 47.826 0.00 0.00 0.00 2.17
3752 3824 3.211803 TGTAGTGTCGTCTCCAAATCG 57.788 47.619 0.00 0.00 0.00 3.34
3753 3825 2.094906 TGTAGTGTCGTCTCCAAATCGG 60.095 50.000 0.00 0.00 0.00 4.18
3754 3826 0.389948 AGTGTCGTCTCCAAATCGGC 60.390 55.000 0.00 0.00 33.14 5.54
3755 3827 1.079405 TGTCGTCTCCAAATCGGCC 60.079 57.895 0.00 0.00 33.14 6.13
3756 3828 1.079405 GTCGTCTCCAAATCGGCCA 60.079 57.895 2.24 0.00 33.14 5.36
3757 3829 1.084370 GTCGTCTCCAAATCGGCCAG 61.084 60.000 2.24 0.00 33.14 4.85
3758 3830 2.464459 CGTCTCCAAATCGGCCAGC 61.464 63.158 2.24 0.00 33.14 4.85
3759 3831 2.125147 TCTCCAAATCGGCCAGCG 60.125 61.111 2.24 0.00 33.14 5.18
3760 3832 2.436646 CTCCAAATCGGCCAGCGT 60.437 61.111 2.24 0.00 33.14 5.07
3761 3833 2.745884 TCCAAATCGGCCAGCGTG 60.746 61.111 2.24 0.00 33.14 5.34
3762 3834 3.055719 CCAAATCGGCCAGCGTGT 61.056 61.111 2.24 0.00 0.00 4.49
3763 3835 2.176546 CAAATCGGCCAGCGTGTG 59.823 61.111 2.24 0.00 0.00 3.82
3764 3836 2.281484 AAATCGGCCAGCGTGTGT 60.281 55.556 2.24 0.00 0.00 3.72
3765 3837 2.325082 AAATCGGCCAGCGTGTGTC 61.325 57.895 2.24 0.00 0.00 3.67
3769 3841 3.276846 GGCCAGCGTGTGTCGTTT 61.277 61.111 0.00 0.00 42.13 3.60
3770 3842 2.052237 GCCAGCGTGTGTCGTTTG 60.052 61.111 0.00 0.00 42.13 2.93
3771 3843 2.052237 CCAGCGTGTGTCGTTTGC 60.052 61.111 0.00 0.00 42.13 3.68
3772 3844 2.534019 CCAGCGTGTGTCGTTTGCT 61.534 57.895 0.00 0.00 42.13 3.91
3773 3845 1.218875 CCAGCGTGTGTCGTTTGCTA 61.219 55.000 0.00 0.00 42.13 3.49
3774 3846 0.579630 CAGCGTGTGTCGTTTGCTAA 59.420 50.000 0.00 0.00 42.13 3.09
3775 3847 0.859232 AGCGTGTGTCGTTTGCTAAG 59.141 50.000 0.00 0.00 42.13 2.18
3776 3848 0.580104 GCGTGTGTCGTTTGCTAAGT 59.420 50.000 0.00 0.00 42.13 2.24
3777 3849 1.788308 GCGTGTGTCGTTTGCTAAGTA 59.212 47.619 0.00 0.00 42.13 2.24
3778 3850 2.160013 GCGTGTGTCGTTTGCTAAGTAG 60.160 50.000 0.00 0.00 42.13 2.57
3779 3851 3.047796 CGTGTGTCGTTTGCTAAGTAGT 58.952 45.455 0.00 0.00 34.52 2.73
3780 3852 3.488310 CGTGTGTCGTTTGCTAAGTAGTT 59.512 43.478 0.00 0.00 34.52 2.24
3781 3853 4.026310 CGTGTGTCGTTTGCTAAGTAGTTT 60.026 41.667 0.00 0.00 34.52 2.66
3782 3854 5.429615 GTGTGTCGTTTGCTAAGTAGTTTC 58.570 41.667 0.00 0.00 0.00 2.78
3783 3855 4.207635 TGTGTCGTTTGCTAAGTAGTTTCG 59.792 41.667 0.00 0.00 0.00 3.46
3784 3856 4.207841 GTGTCGTTTGCTAAGTAGTTTCGT 59.792 41.667 0.00 0.00 0.00 3.85
3785 3857 4.805192 TGTCGTTTGCTAAGTAGTTTCGTT 59.195 37.500 0.00 0.00 0.00 3.85
3786 3858 5.128468 GTCGTTTGCTAAGTAGTTTCGTTG 58.872 41.667 0.00 0.00 0.00 4.10
3787 3859 4.805192 TCGTTTGCTAAGTAGTTTCGTTGT 59.195 37.500 0.00 0.00 0.00 3.32
3788 3860 5.051508 TCGTTTGCTAAGTAGTTTCGTTGTC 60.052 40.000 0.00 0.00 0.00 3.18
3789 3861 5.051240 CGTTTGCTAAGTAGTTTCGTTGTCT 60.051 40.000 0.00 0.00 0.00 3.41
3790 3862 6.142798 CGTTTGCTAAGTAGTTTCGTTGTCTA 59.857 38.462 0.00 0.00 0.00 2.59
3791 3863 7.306167 CGTTTGCTAAGTAGTTTCGTTGTCTAA 60.306 37.037 0.00 0.00 0.00 2.10
3792 3864 8.330302 GTTTGCTAAGTAGTTTCGTTGTCTAAA 58.670 33.333 0.00 0.00 0.00 1.85
4028 4101 1.152673 GGATAGGCAAGCAAGGGGG 60.153 63.158 0.00 0.00 0.00 5.40
4030 4103 0.258774 GATAGGCAAGCAAGGGGGAA 59.741 55.000 0.00 0.00 0.00 3.97
4031 4104 0.936691 ATAGGCAAGCAAGGGGGAAT 59.063 50.000 0.00 0.00 0.00 3.01
4032 4105 1.602440 TAGGCAAGCAAGGGGGAATA 58.398 50.000 0.00 0.00 0.00 1.75
4035 4108 0.756815 GCAAGCAAGGGGGAATAGGG 60.757 60.000 0.00 0.00 0.00 3.53
4137 4212 6.174760 TGTCATCATCAGATCATTTCACACA 58.825 36.000 0.00 0.00 30.20 3.72
4227 4315 2.610479 GCCTTTGCTGAAAGTTTAGCCC 60.610 50.000 5.47 0.00 37.47 5.19
4334 4422 1.053424 GTGGGTGAGTGGTGGTTCTA 58.947 55.000 0.00 0.00 0.00 2.10
4365 4453 3.496160 GGCTCTGGTTCCTTGTCACTTTA 60.496 47.826 0.00 0.00 0.00 1.85
4467 4587 2.162754 GCCGCAGCATCAACATTGC 61.163 57.895 0.00 0.00 40.45 3.56
4468 4588 1.213275 CCGCAGCATCAACATTGCA 59.787 52.632 0.00 0.00 42.62 4.08
4469 4589 0.179121 CCGCAGCATCAACATTGCAT 60.179 50.000 0.00 0.00 42.62 3.96
4470 4590 1.635844 CGCAGCATCAACATTGCATT 58.364 45.000 0.00 0.00 42.62 3.56
4471 4591 1.323235 CGCAGCATCAACATTGCATTG 59.677 47.619 7.04 7.04 42.62 2.82
4488 4608 1.112315 TTGGACGCATGCAAAGGGTT 61.112 50.000 19.57 0.00 32.51 4.11
4489 4609 1.080569 GGACGCATGCAAAGGGTTG 60.081 57.895 19.57 0.50 37.83 3.77
4490 4610 1.659794 GACGCATGCAAAGGGTTGT 59.340 52.632 19.57 4.23 37.06 3.32
4491 4611 0.664166 GACGCATGCAAAGGGTTGTG 60.664 55.000 19.57 4.47 37.06 3.33
4494 4614 0.104671 GCATGCAAAGGGTTGTGTGT 59.895 50.000 14.21 0.00 37.06 3.72
4495 4615 1.855513 CATGCAAAGGGTTGTGTGTG 58.144 50.000 0.00 0.00 37.06 3.82
4496 4616 0.104671 ATGCAAAGGGTTGTGTGTGC 59.895 50.000 0.00 0.00 37.06 4.57
4497 4617 1.227234 GCAAAGGGTTGTGTGTGCC 60.227 57.895 0.00 0.00 37.06 5.01
4498 4618 1.954362 GCAAAGGGTTGTGTGTGCCA 61.954 55.000 0.00 0.00 37.06 4.92
4499 4619 0.102844 CAAAGGGTTGTGTGTGCCAG 59.897 55.000 0.00 0.00 0.00 4.85
4500 4620 1.042559 AAAGGGTTGTGTGTGCCAGG 61.043 55.000 0.00 0.00 0.00 4.45
4501 4621 3.605664 GGGTTGTGTGTGCCAGGC 61.606 66.667 3.66 3.66 0.00 4.85
4502 4622 2.832661 GGTTGTGTGTGCCAGGCA 60.833 61.111 11.22 11.22 35.60 4.75
4533 4653 5.475220 TGAAACAGAGAAGACCAACAAACAA 59.525 36.000 0.00 0.00 0.00 2.83
4545 4665 5.575019 ACCAACAAACAACGTCAAATAGAC 58.425 37.500 0.00 0.00 44.02 2.59
4546 4666 5.355910 ACCAACAAACAACGTCAAATAGACT 59.644 36.000 0.00 0.00 45.32 3.24
4559 4679 8.388103 ACGTCAAATAGACTATTATGCAACAAC 58.612 33.333 8.14 3.45 45.32 3.32
4576 4696 7.147312 TGCAACAACTGAATTTAGATTTGGAG 58.853 34.615 3.94 0.00 0.00 3.86
4644 4764 9.909644 TTCTTCTTCTATATATAAACTGCGACC 57.090 33.333 0.00 0.00 0.00 4.79
4645 4765 9.074576 TCTTCTTCTATATATAAACTGCGACCA 57.925 33.333 0.00 0.00 0.00 4.02
4646 4766 9.692749 CTTCTTCTATATATAAACTGCGACCAA 57.307 33.333 0.00 0.00 0.00 3.67
4647 4767 9.692749 TTCTTCTATATATAAACTGCGACCAAG 57.307 33.333 0.00 0.00 0.00 3.61
4648 4768 9.074576 TCTTCTATATATAAACTGCGACCAAGA 57.925 33.333 0.00 0.00 0.00 3.02
4649 4769 9.862371 CTTCTATATATAAACTGCGACCAAGAT 57.138 33.333 0.00 0.00 0.00 2.40
4650 4770 9.856488 TTCTATATATAAACTGCGACCAAGATC 57.144 33.333 0.00 0.00 0.00 2.75
4651 4771 9.020731 TCTATATATAAACTGCGACCAAGATCA 57.979 33.333 0.00 0.00 0.00 2.92
4652 4772 9.639601 CTATATATAAACTGCGACCAAGATCAA 57.360 33.333 0.00 0.00 0.00 2.57
4653 4773 6.851222 ATATAAACTGCGACCAAGATCAAG 57.149 37.500 0.00 0.00 0.00 3.02
4654 4774 1.160137 AACTGCGACCAAGATCAAGC 58.840 50.000 0.00 0.00 0.00 4.01
4655 4775 0.674895 ACTGCGACCAAGATCAAGCC 60.675 55.000 0.00 0.00 0.00 4.35
4656 4776 0.674581 CTGCGACCAAGATCAAGCCA 60.675 55.000 0.00 0.00 0.00 4.75
4657 4777 0.035152 TGCGACCAAGATCAAGCCAT 60.035 50.000 0.00 0.00 0.00 4.40
4658 4778 0.659957 GCGACCAAGATCAAGCCATC 59.340 55.000 0.00 0.00 0.00 3.51
4659 4779 1.303309 CGACCAAGATCAAGCCATCC 58.697 55.000 0.00 0.00 0.00 3.51
4660 4780 1.134280 CGACCAAGATCAAGCCATCCT 60.134 52.381 0.00 0.00 0.00 3.24
4661 4781 2.570135 GACCAAGATCAAGCCATCCTC 58.430 52.381 0.00 0.00 0.00 3.71
4662 4782 1.918262 ACCAAGATCAAGCCATCCTCA 59.082 47.619 0.00 0.00 0.00 3.86
4663 4783 2.512896 ACCAAGATCAAGCCATCCTCAT 59.487 45.455 0.00 0.00 0.00 2.90
4664 4784 3.147629 CCAAGATCAAGCCATCCTCATC 58.852 50.000 0.00 0.00 0.00 2.92
4665 4785 2.806818 CAAGATCAAGCCATCCTCATCG 59.193 50.000 0.00 0.00 0.00 3.84
4666 4786 2.045524 AGATCAAGCCATCCTCATCGT 58.954 47.619 0.00 0.00 0.00 3.73
4667 4787 3.234353 AGATCAAGCCATCCTCATCGTA 58.766 45.455 0.00 0.00 0.00 3.43
4668 4788 3.257873 AGATCAAGCCATCCTCATCGTAG 59.742 47.826 0.00 0.00 0.00 3.51
4669 4789 2.666317 TCAAGCCATCCTCATCGTAGA 58.334 47.619 0.00 0.00 45.75 2.59
4670 4790 2.625314 TCAAGCCATCCTCATCGTAGAG 59.375 50.000 0.79 0.79 43.63 2.43
4671 4791 2.363680 CAAGCCATCCTCATCGTAGAGT 59.636 50.000 6.23 0.00 43.63 3.24
4672 4792 3.510531 AGCCATCCTCATCGTAGAGTA 57.489 47.619 6.23 0.00 43.63 2.59
4673 4793 3.833732 AGCCATCCTCATCGTAGAGTAA 58.166 45.455 6.23 0.00 43.63 2.24
4674 4794 4.215908 AGCCATCCTCATCGTAGAGTAAA 58.784 43.478 6.23 0.00 43.63 2.01
4675 4795 4.835615 AGCCATCCTCATCGTAGAGTAAAT 59.164 41.667 6.23 0.00 43.63 1.40
4676 4796 4.926238 GCCATCCTCATCGTAGAGTAAATG 59.074 45.833 6.23 6.63 43.63 2.32
4677 4797 5.279006 GCCATCCTCATCGTAGAGTAAATGA 60.279 44.000 6.23 0.00 43.63 2.57
4678 4798 6.385843 CCATCCTCATCGTAGAGTAAATGAG 58.614 44.000 4.59 4.59 43.63 2.90
4679 4799 6.207614 CCATCCTCATCGTAGAGTAAATGAGA 59.792 42.308 11.69 0.98 45.09 3.27
4680 4800 7.255625 CCATCCTCATCGTAGAGTAAATGAGAA 60.256 40.741 11.69 0.00 45.09 2.87
4681 4801 7.265647 TCCTCATCGTAGAGTAAATGAGAAG 57.734 40.000 11.69 0.00 45.09 2.85
4682 4802 7.054751 TCCTCATCGTAGAGTAAATGAGAAGA 58.945 38.462 11.69 0.88 45.09 2.87
4683 4803 7.721842 TCCTCATCGTAGAGTAAATGAGAAGAT 59.278 37.037 11.69 0.00 45.09 2.40
4684 4804 8.020819 CCTCATCGTAGAGTAAATGAGAAGATC 58.979 40.741 11.69 0.00 45.09 2.75
4685 4805 8.684386 TCATCGTAGAGTAAATGAGAAGATCT 57.316 34.615 0.00 0.00 43.63 2.75
4686 4806 8.779303 TCATCGTAGAGTAAATGAGAAGATCTC 58.221 37.037 0.00 0.39 43.63 2.75
4687 4807 8.783093 CATCGTAGAGTAAATGAGAAGATCTCT 58.217 37.037 8.68 0.00 41.98 3.10
4688 4808 8.740123 TCGTAGAGTAAATGAGAAGATCTCTT 57.260 34.615 8.68 0.00 43.73 2.85
4689 4809 8.616942 TCGTAGAGTAAATGAGAAGATCTCTTG 58.383 37.037 8.68 0.00 43.73 3.02
4690 4810 8.402472 CGTAGAGTAAATGAGAAGATCTCTTGT 58.598 37.037 8.68 0.00 43.73 3.16
4693 4813 9.651913 AGAGTAAATGAGAAGATCTCTTGTTTC 57.348 33.333 8.68 0.00 43.73 2.78
4694 4814 9.429359 GAGTAAATGAGAAGATCTCTTGTTTCA 57.571 33.333 8.68 0.00 43.73 2.69
4695 4815 9.213799 AGTAAATGAGAAGATCTCTTGTTTCAC 57.786 33.333 8.68 0.00 43.73 3.18
4696 4816 6.718454 AATGAGAAGATCTCTTGTTTCACG 57.282 37.500 8.68 0.00 43.73 4.35
4697 4817 4.560128 TGAGAAGATCTCTTGTTTCACGG 58.440 43.478 8.68 0.00 43.73 4.94
4698 4818 4.280929 TGAGAAGATCTCTTGTTTCACGGA 59.719 41.667 8.68 0.00 43.73 4.69
4699 4819 5.047021 TGAGAAGATCTCTTGTTTCACGGAT 60.047 40.000 8.68 0.00 43.73 4.18
4700 4820 5.415221 AGAAGATCTCTTGTTTCACGGATC 58.585 41.667 0.00 0.00 36.11 3.36
4701 4821 4.130286 AGATCTCTTGTTTCACGGATCC 57.870 45.455 0.00 0.00 32.56 3.36
4702 4822 2.363788 TCTCTTGTTTCACGGATCCG 57.636 50.000 32.20 32.20 46.03 4.18
4703 4823 7.302725 AAGATCTCTTGTTTCACGGATCCGT 62.303 44.000 33.76 33.76 43.45 4.69
4704 4824 8.987253 AAGATCTCTTGTTTCACGGATCCGTC 62.987 46.154 36.27 24.66 41.95 4.79
4713 4833 3.509266 CGGATCCGTCGCATTTTTC 57.491 52.632 26.35 0.00 34.35 2.29
4714 4834 1.006832 CGGATCCGTCGCATTTTTCT 58.993 50.000 26.35 0.00 34.35 2.52
4715 4835 1.396996 CGGATCCGTCGCATTTTTCTT 59.603 47.619 26.35 0.00 34.35 2.52
4716 4836 2.159572 CGGATCCGTCGCATTTTTCTTT 60.160 45.455 26.35 0.00 34.35 2.52
4717 4837 3.669557 CGGATCCGTCGCATTTTTCTTTT 60.670 43.478 26.35 0.00 34.35 2.27
4718 4838 4.234574 GGATCCGTCGCATTTTTCTTTTT 58.765 39.130 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.590195 GACGGCAATGAGATGATGGC 59.410 55.000 0.00 0.00 36.39 4.40
1 2 0.863799 CGACGGCAATGAGATGATGG 59.136 55.000 0.00 0.00 0.00 3.51
2 3 0.863799 CCGACGGCAATGAGATGATG 59.136 55.000 0.00 0.00 0.00 3.07
3 4 0.465705 ACCGACGGCAATGAGATGAT 59.534 50.000 15.39 0.00 0.00 2.45
4 5 0.179111 GACCGACGGCAATGAGATGA 60.179 55.000 15.39 0.00 0.00 2.92
5 6 1.482621 CGACCGACGGCAATGAGATG 61.483 60.000 15.39 0.00 38.46 2.90
6 7 1.226974 CGACCGACGGCAATGAGAT 60.227 57.895 15.39 0.00 38.46 2.75
7 8 2.180769 CGACCGACGGCAATGAGA 59.819 61.111 15.39 0.00 38.46 3.27
21 22 0.893727 ACAATTCAGGGGTTGCCGAC 60.894 55.000 0.00 0.00 0.00 4.79
22 23 0.178975 AACAATTCAGGGGTTGCCGA 60.179 50.000 0.00 0.00 0.00 5.54
23 24 0.243636 GAACAATTCAGGGGTTGCCG 59.756 55.000 0.00 0.00 0.00 5.69
24 25 1.632589 AGAACAATTCAGGGGTTGCC 58.367 50.000 0.00 0.00 0.00 4.52
25 26 3.056821 GGTAAGAACAATTCAGGGGTTGC 60.057 47.826 0.00 0.00 0.00 4.17
26 27 4.407365 AGGTAAGAACAATTCAGGGGTTG 58.593 43.478 0.00 0.00 0.00 3.77
27 28 4.741928 AGGTAAGAACAATTCAGGGGTT 57.258 40.909 0.00 0.00 0.00 4.11
28 29 6.126565 GGTATAGGTAAGAACAATTCAGGGGT 60.127 42.308 0.00 0.00 0.00 4.95
29 30 6.126594 TGGTATAGGTAAGAACAATTCAGGGG 60.127 42.308 0.00 0.00 0.00 4.79
30 31 6.766467 GTGGTATAGGTAAGAACAATTCAGGG 59.234 42.308 0.00 0.00 0.00 4.45
31 32 7.565680 AGTGGTATAGGTAAGAACAATTCAGG 58.434 38.462 0.00 0.00 0.00 3.86
32 33 7.435488 CGAGTGGTATAGGTAAGAACAATTCAG 59.565 40.741 0.00 0.00 0.00 3.02
33 34 7.262772 CGAGTGGTATAGGTAAGAACAATTCA 58.737 38.462 0.00 0.00 0.00 2.57
34 35 6.200475 GCGAGTGGTATAGGTAAGAACAATTC 59.800 42.308 0.00 0.00 0.00 2.17
35 36 6.047231 GCGAGTGGTATAGGTAAGAACAATT 58.953 40.000 0.00 0.00 0.00 2.32
36 37 5.598769 GCGAGTGGTATAGGTAAGAACAAT 58.401 41.667 0.00 0.00 0.00 2.71
37 38 4.439153 CGCGAGTGGTATAGGTAAGAACAA 60.439 45.833 0.00 0.00 0.00 2.83
38 39 3.065786 CGCGAGTGGTATAGGTAAGAACA 59.934 47.826 0.00 0.00 0.00 3.18
39 40 3.549625 CCGCGAGTGGTATAGGTAAGAAC 60.550 52.174 8.23 0.00 0.00 3.01
40 41 2.620115 CCGCGAGTGGTATAGGTAAGAA 59.380 50.000 8.23 0.00 0.00 2.52
41 42 2.158769 TCCGCGAGTGGTATAGGTAAGA 60.159 50.000 8.23 0.00 0.00 2.10
42 43 2.031333 GTCCGCGAGTGGTATAGGTAAG 60.031 54.545 8.23 0.00 0.00 2.34
43 44 1.949525 GTCCGCGAGTGGTATAGGTAA 59.050 52.381 8.23 0.00 0.00 2.85
44 45 1.597742 GTCCGCGAGTGGTATAGGTA 58.402 55.000 8.23 0.00 0.00 3.08
45 46 1.105759 GGTCCGCGAGTGGTATAGGT 61.106 60.000 8.23 0.00 0.00 3.08
46 47 1.105167 TGGTCCGCGAGTGGTATAGG 61.105 60.000 8.23 0.00 0.00 2.57
47 48 0.742505 TTGGTCCGCGAGTGGTATAG 59.257 55.000 8.23 0.00 0.00 1.31
48 49 1.135527 CTTTGGTCCGCGAGTGGTATA 59.864 52.381 8.23 0.00 0.00 1.47
49 50 0.108329 CTTTGGTCCGCGAGTGGTAT 60.108 55.000 8.23 0.00 0.00 2.73
50 51 1.290955 CTTTGGTCCGCGAGTGGTA 59.709 57.895 8.23 0.00 0.00 3.25
51 52 2.030562 CTTTGGTCCGCGAGTGGT 59.969 61.111 8.23 0.00 0.00 4.16
52 53 3.423154 GCTTTGGTCCGCGAGTGG 61.423 66.667 8.23 0.00 0.00 4.00
53 54 3.423154 GGCTTTGGTCCGCGAGTG 61.423 66.667 8.23 0.00 0.00 3.51
54 55 3.178540 AAGGCTTTGGTCCGCGAGT 62.179 57.895 8.23 0.00 0.00 4.18
55 56 2.358737 AAGGCTTTGGTCCGCGAG 60.359 61.111 8.23 0.00 0.00 5.03
56 57 2.668212 CAAGGCTTTGGTCCGCGA 60.668 61.111 8.23 0.00 0.00 5.87
64 65 3.373565 GCGGACCCCAAGGCTTTG 61.374 66.667 0.68 0.68 36.11 2.77
65 66 3.224007 ATGCGGACCCCAAGGCTTT 62.224 57.895 0.00 0.00 36.11 3.51
66 67 3.645268 GATGCGGACCCCAAGGCTT 62.645 63.158 0.00 0.00 36.11 4.35
67 68 4.115199 GATGCGGACCCCAAGGCT 62.115 66.667 0.00 0.00 36.11 4.58
68 69 4.115199 AGATGCGGACCCCAAGGC 62.115 66.667 0.00 0.00 36.11 4.35
69 70 2.190578 GAGATGCGGACCCCAAGG 59.809 66.667 0.00 0.00 40.04 3.61
70 71 2.190578 GGAGATGCGGACCCCAAG 59.809 66.667 0.00 0.00 0.00 3.61
71 72 2.285368 AGGAGATGCGGACCCCAA 60.285 61.111 0.00 0.00 0.00 4.12
72 73 2.764128 GAGGAGATGCGGACCCCA 60.764 66.667 0.00 0.00 0.00 4.96
73 74 3.551407 GGAGGAGATGCGGACCCC 61.551 72.222 0.00 0.00 0.00 4.95
74 75 3.551407 GGGAGGAGATGCGGACCC 61.551 72.222 0.00 0.00 0.00 4.46
75 76 3.917760 CGGGAGGAGATGCGGACC 61.918 72.222 0.00 0.00 0.00 4.46
76 77 3.140225 GACGGGAGGAGATGCGGAC 62.140 68.421 0.00 0.00 0.00 4.79
80 81 1.945354 TTGACGACGGGAGGAGATGC 61.945 60.000 0.00 0.00 0.00 3.91
85 86 2.654877 GCTTTGACGACGGGAGGA 59.345 61.111 0.00 0.00 0.00 3.71
86 87 2.809601 CGCTTTGACGACGGGAGG 60.810 66.667 0.00 0.00 34.06 4.30
92 93 2.070783 TCCATTTACCGCTTTGACGAC 58.929 47.619 0.00 0.00 34.06 4.34
98 99 3.610911 CTCTCCTTCCATTTACCGCTTT 58.389 45.455 0.00 0.00 0.00 3.51
111 112 3.803162 GCAGGCCCCCTCTCCTTC 61.803 72.222 0.00 0.00 0.00 3.46
134 135 4.408921 TCAATCTACCCACTTCCACCATAG 59.591 45.833 0.00 0.00 0.00 2.23
136 137 3.054361 GTCAATCTACCCACTTCCACCAT 60.054 47.826 0.00 0.00 0.00 3.55
138 139 2.355818 GGTCAATCTACCCACTTCCACC 60.356 54.545 0.00 0.00 33.02 4.61
144 145 0.902531 CGGTGGTCAATCTACCCACT 59.097 55.000 7.86 0.00 46.30 4.00
155 156 2.494530 GCAAAAAGGGCGGTGGTCA 61.495 57.895 0.00 0.00 0.00 4.02
157 158 3.230990 GGCAAAAAGGGCGGTGGT 61.231 61.111 0.00 0.00 0.00 4.16
163 164 3.418047 TCACTACTAAGGCAAAAAGGGC 58.582 45.455 0.00 0.00 0.00 5.19
165 166 7.711339 CCTACTATCACTACTAAGGCAAAAAGG 59.289 40.741 0.00 0.00 0.00 3.11
166 167 7.711339 CCCTACTATCACTACTAAGGCAAAAAG 59.289 40.741 0.00 0.00 0.00 2.27
177 181 5.043582 TCCTTTCCACCCTACTATCACTACT 60.044 44.000 0.00 0.00 0.00 2.57
182 186 3.381335 GGTCCTTTCCACCCTACTATCA 58.619 50.000 0.00 0.00 0.00 2.15
193 197 2.505819 GAGCTATGAAGGGTCCTTTCCA 59.494 50.000 11.02 3.38 36.26 3.53
253 257 6.195983 CGTTGGACGTACTTAGACATTATGAC 59.804 42.308 0.00 0.00 36.74 3.06
262 266 5.237815 TCTTACTCGTTGGACGTACTTAGA 58.762 41.667 0.00 0.00 43.14 2.10
263 267 5.536554 TCTTACTCGTTGGACGTACTTAG 57.463 43.478 0.00 0.00 43.14 2.18
267 271 4.560427 GGAATTCTTACTCGTTGGACGTAC 59.440 45.833 5.23 0.00 43.14 3.67
272 276 4.019681 ACCATGGAATTCTTACTCGTTGGA 60.020 41.667 21.47 0.00 0.00 3.53
275 279 7.989416 TTTTACCATGGAATTCTTACTCGTT 57.011 32.000 21.47 0.00 0.00 3.85
284 288 8.770438 TGCTTTACATTTTTACCATGGAATTC 57.230 30.769 21.47 0.00 0.00 2.17
299 303 3.613494 TGCATGGCATTGCTTTACATT 57.387 38.095 18.20 0.00 43.18 2.71
361 374 9.118236 GTCTTGCAACTGTATTCAAATTACTTC 57.882 33.333 0.00 0.00 0.00 3.01
362 375 8.629158 TGTCTTGCAACTGTATTCAAATTACTT 58.371 29.630 0.00 0.00 0.00 2.24
378 391 4.083537 TGTCGGAATTATGTGTCTTGCAAC 60.084 41.667 0.00 0.00 0.00 4.17
381 394 4.678509 TTGTCGGAATTATGTGTCTTGC 57.321 40.909 0.00 0.00 0.00 4.01
384 397 9.778741 ATACATTATTGTCGGAATTATGTGTCT 57.221 29.630 16.40 5.35 37.28 3.41
428 441 8.792830 TTGAGAGTTCACTTTTATAGATTGGG 57.207 34.615 0.00 0.00 31.71 4.12
460 473 4.513442 TGGATGCTTACACATAGGTTGTC 58.487 43.478 0.00 0.00 36.00 3.18
471 484 5.589855 CACAACTAATGGATGGATGCTTACA 59.410 40.000 0.00 0.00 0.00 2.41
488 501 4.825085 GGTTCATGGACCTTTTCACAACTA 59.175 41.667 16.69 0.00 36.73 2.24
493 506 2.955660 TGTGGTTCATGGACCTTTTCAC 59.044 45.455 24.02 13.53 40.47 3.18
501 514 3.071874 TGGAGATTGTGGTTCATGGAC 57.928 47.619 0.00 0.00 0.00 4.02
548 562 6.279882 TGGAATTTGCCTAGTTCACAAAAAG 58.720 36.000 0.00 0.00 36.90 2.27
553 567 4.892934 AGTTTGGAATTTGCCTAGTTCACA 59.107 37.500 0.00 0.00 0.00 3.58
554 568 5.453567 AGTTTGGAATTTGCCTAGTTCAC 57.546 39.130 0.00 0.00 0.00 3.18
555 569 7.589958 TTTAGTTTGGAATTTGCCTAGTTCA 57.410 32.000 0.00 0.00 0.00 3.18
556 570 8.357402 TCTTTTAGTTTGGAATTTGCCTAGTTC 58.643 33.333 0.00 0.00 0.00 3.01
559 573 8.141268 TGTTCTTTTAGTTTGGAATTTGCCTAG 58.859 33.333 0.00 0.00 0.00 3.02
560 574 8.012957 TGTTCTTTTAGTTTGGAATTTGCCTA 57.987 30.769 0.00 0.00 0.00 3.93
561 575 6.883744 TGTTCTTTTAGTTTGGAATTTGCCT 58.116 32.000 0.00 0.00 0.00 4.75
562 576 7.546778 TTGTTCTTTTAGTTTGGAATTTGCC 57.453 32.000 0.00 0.00 0.00 4.52
563 577 7.011389 AGCTTGTTCTTTTAGTTTGGAATTTGC 59.989 33.333 0.00 0.00 0.00 3.68
564 578 8.424274 AGCTTGTTCTTTTAGTTTGGAATTTG 57.576 30.769 0.00 0.00 0.00 2.32
565 579 8.882736 CAAGCTTGTTCTTTTAGTTTGGAATTT 58.117 29.630 18.65 0.00 0.00 1.82
566 580 7.011389 GCAAGCTTGTTCTTTTAGTTTGGAATT 59.989 33.333 26.55 0.00 32.74 2.17
799 816 1.890510 GGTCCCGCGTTTGAACTGT 60.891 57.895 4.92 0.00 0.00 3.55
1058 1075 0.689412 CAACCTCCTCCTCCTCCTCC 60.689 65.000 0.00 0.00 0.00 4.30
1083 1103 1.003003 GAAGCTTCCTCTCAACAGCCT 59.997 52.381 15.97 0.00 32.25 4.58
1126 1146 3.310860 GATGGACACCGACCCGCTT 62.311 63.158 0.00 0.00 0.00 4.68
1230 1254 3.978193 ACAAGAATGCCCCCGCCA 61.978 61.111 0.00 0.00 0.00 5.69
1247 1271 3.053693 CCTACACAAATCAATCCTCCCCA 60.054 47.826 0.00 0.00 0.00 4.96
1287 1311 2.357637 CCAAACAAGAAGAGCAAACGGA 59.642 45.455 0.00 0.00 0.00 4.69
1300 1324 2.884639 CCACCCTAACAGACCAAACAAG 59.115 50.000 0.00 0.00 0.00 3.16
1328 1352 1.277557 TCAGCAAGAAGAAGCTCCTCC 59.722 52.381 0.00 0.00 39.50 4.30
1338 1366 1.475682 GGGGCAGAAATCAGCAAGAAG 59.524 52.381 0.20 0.00 0.00 2.85
1425 1456 1.495579 CCCCCATGGAGGAGGCATAG 61.496 65.000 15.22 0.00 41.22 2.23
1507 1538 7.771927 AGAATTTCATTTGGTCTGACAGAAT 57.228 32.000 6.76 6.15 0.00 2.40
1606 1637 9.347934 CCGTTGCAACTATACATTTAAAATGAA 57.652 29.630 26.09 0.00 0.00 2.57
1607 1638 7.486551 GCCGTTGCAACTATACATTTAAAATGA 59.513 33.333 26.09 0.00 37.47 2.57
1737 1769 5.394883 CCCAATTGACCAGATTCCAGAAATG 60.395 44.000 7.12 0.00 0.00 2.32
1747 1779 1.932338 ACCATCCCCAATTGACCAGAT 59.068 47.619 7.12 0.57 0.00 2.90
1775 1807 5.852282 AACAGCTGTAAACAAACCATTCT 57.148 34.783 22.01 0.00 0.00 2.40
1780 1812 9.524106 AAATTTAGTAACAGCTGTAAACAAACC 57.476 29.630 22.01 2.08 0.00 3.27
1862 1894 5.038683 CGCCGTATACAGAAACAGATACAA 58.961 41.667 3.32 0.00 0.00 2.41
1869 1901 3.786516 TCATCGCCGTATACAGAAACA 57.213 42.857 3.32 0.00 0.00 2.83
1872 1904 3.379057 TGTCTTCATCGCCGTATACAGAA 59.621 43.478 3.32 0.00 0.00 3.02
1875 1907 3.702330 CTTGTCTTCATCGCCGTATACA 58.298 45.455 3.32 0.00 0.00 2.29
1878 1910 1.571919 GCTTGTCTTCATCGCCGTAT 58.428 50.000 0.00 0.00 0.00 3.06
1917 1949 5.276584 GCACTCACAATTTAGAGCTACATCG 60.277 44.000 4.26 0.00 35.28 3.84
2060 2092 0.179234 TTGTGAAGCAACAGGGACGA 59.821 50.000 0.00 0.00 31.07 4.20
2137 2169 7.120873 AGCAGATGATCATGTAAAATATGGAGC 59.879 37.037 14.30 4.72 0.00 4.70
2192 2232 1.404391 GACAGCAGATGCCATGAAAGG 59.596 52.381 0.14 0.00 43.38 3.11
2338 2378 4.712051 TTAGGCACCAGCAGAATATGAT 57.288 40.909 0.00 0.00 44.61 2.45
2341 2381 3.459598 TCCTTTAGGCACCAGCAGAATAT 59.540 43.478 0.00 0.00 44.61 1.28
2349 2390 1.208293 GAGGACTCCTTTAGGCACCAG 59.792 57.143 0.00 0.00 33.25 4.00
2401 2442 1.033746 CCATGCACATCACAGACCCC 61.034 60.000 0.00 0.00 0.00 4.95
2458 2501 3.425758 GGCTAATCGTGCAAACACTTACC 60.426 47.826 0.00 0.00 45.10 2.85
2479 2523 8.445493 CAAAATCAAATAGCAAGCTTTAAAGGG 58.555 33.333 16.78 0.00 0.00 3.95
3149 3219 1.168714 GGTTGATGAACTGGGTGAGC 58.831 55.000 0.00 0.00 32.15 4.26
3173 3245 9.072375 CAGTTAAGTCATGTCTCCTGATAGATA 57.928 37.037 7.84 0.00 0.00 1.98
3303 3375 0.731417 GTACCTCGACTAGAGCGCAA 59.269 55.000 11.47 0.00 45.54 4.85
3432 3504 2.685017 TGGCTGCTCCTCGGTGAT 60.685 61.111 0.00 0.00 35.26 3.06
3452 3524 0.820482 CCATCGGGATCAGCATTGCA 60.820 55.000 11.91 0.00 35.59 4.08
3530 3602 1.228154 GAACGGGTTCAGGGTGCTT 60.228 57.895 6.68 0.00 39.31 3.91
3634 3706 0.241213 TCGTCTGTGTAGCAGCACTC 59.759 55.000 11.09 0.00 44.66 3.51
3635 3707 0.039074 GTCGTCTGTGTAGCAGCACT 60.039 55.000 11.09 0.00 44.66 4.40
3636 3708 1.337817 CGTCGTCTGTGTAGCAGCAC 61.338 60.000 0.00 4.04 44.66 4.40
3637 3709 1.081442 CGTCGTCTGTGTAGCAGCA 60.081 57.895 0.00 0.00 44.66 4.41
3638 3710 2.437343 GCGTCGTCTGTGTAGCAGC 61.437 63.158 0.00 0.00 44.66 5.25
3639 3711 1.067743 CAGCGTCGTCTGTGTAGCAG 61.068 60.000 8.07 0.00 46.34 4.24
3640 3712 1.081442 CAGCGTCGTCTGTGTAGCA 60.081 57.895 8.07 0.00 0.00 3.49
3641 3713 2.437343 GCAGCGTCGTCTGTGTAGC 61.437 63.158 15.01 1.16 36.49 3.58
3642 3714 0.456824 ATGCAGCGTCGTCTGTGTAG 60.457 55.000 15.01 0.00 36.49 2.74
3643 3715 0.806241 TATGCAGCGTCGTCTGTGTA 59.194 50.000 15.01 8.04 36.49 2.90
3644 3716 0.456824 CTATGCAGCGTCGTCTGTGT 60.457 55.000 15.01 8.75 36.49 3.72
3645 3717 1.746727 GCTATGCAGCGTCGTCTGTG 61.747 60.000 15.01 1.44 38.22 3.66
3646 3718 1.517257 GCTATGCAGCGTCGTCTGT 60.517 57.895 15.01 3.10 38.22 3.41
3647 3719 3.303605 GCTATGCAGCGTCGTCTG 58.696 61.111 10.96 10.96 38.22 3.51
3656 3728 1.334869 GTCCCAAAATCGGCTATGCAG 59.665 52.381 0.00 0.00 0.00 4.41
3657 3729 1.388547 GTCCCAAAATCGGCTATGCA 58.611 50.000 0.00 0.00 0.00 3.96
3658 3730 0.307760 CGTCCCAAAATCGGCTATGC 59.692 55.000 0.00 0.00 0.00 3.14
3659 3731 1.597663 GTCGTCCCAAAATCGGCTATG 59.402 52.381 0.00 0.00 0.00 2.23
3660 3732 1.208535 TGTCGTCCCAAAATCGGCTAT 59.791 47.619 0.00 0.00 0.00 2.97
3661 3733 0.609151 TGTCGTCCCAAAATCGGCTA 59.391 50.000 0.00 0.00 0.00 3.93
3662 3734 0.953960 GTGTCGTCCCAAAATCGGCT 60.954 55.000 0.00 0.00 0.00 5.52
3663 3735 0.953960 AGTGTCGTCCCAAAATCGGC 60.954 55.000 0.00 0.00 0.00 5.54
3664 3736 2.373540 TAGTGTCGTCCCAAAATCGG 57.626 50.000 0.00 0.00 0.00 4.18
3665 3737 3.517602 TGATAGTGTCGTCCCAAAATCG 58.482 45.455 0.00 0.00 0.00 3.34
3666 3738 5.584649 TGATTGATAGTGTCGTCCCAAAATC 59.415 40.000 0.00 0.00 0.00 2.17
3667 3739 5.496556 TGATTGATAGTGTCGTCCCAAAAT 58.503 37.500 0.00 0.00 0.00 1.82
3668 3740 4.900684 TGATTGATAGTGTCGTCCCAAAA 58.099 39.130 0.00 0.00 0.00 2.44
3669 3741 4.545208 TGATTGATAGTGTCGTCCCAAA 57.455 40.909 0.00 0.00 0.00 3.28
3670 3742 4.545208 TTGATTGATAGTGTCGTCCCAA 57.455 40.909 0.00 0.00 0.00 4.12
3671 3743 4.250464 GTTTGATTGATAGTGTCGTCCCA 58.750 43.478 0.00 0.00 0.00 4.37
3672 3744 3.621715 GGTTTGATTGATAGTGTCGTCCC 59.378 47.826 0.00 0.00 0.00 4.46
3673 3745 4.250464 TGGTTTGATTGATAGTGTCGTCC 58.750 43.478 0.00 0.00 0.00 4.79
3674 3746 5.006746 GGATGGTTTGATTGATAGTGTCGTC 59.993 44.000 0.00 0.00 0.00 4.20
3675 3747 4.876107 GGATGGTTTGATTGATAGTGTCGT 59.124 41.667 0.00 0.00 0.00 4.34
3676 3748 4.875536 TGGATGGTTTGATTGATAGTGTCG 59.124 41.667 0.00 0.00 0.00 4.35
3677 3749 6.732154 CATGGATGGTTTGATTGATAGTGTC 58.268 40.000 0.00 0.00 0.00 3.67
3678 3750 5.068198 GCATGGATGGTTTGATTGATAGTGT 59.932 40.000 0.00 0.00 0.00 3.55
3679 3751 5.068067 TGCATGGATGGTTTGATTGATAGTG 59.932 40.000 0.00 0.00 0.00 2.74
3680 3752 5.202765 TGCATGGATGGTTTGATTGATAGT 58.797 37.500 0.00 0.00 0.00 2.12
3681 3753 5.533528 TCTGCATGGATGGTTTGATTGATAG 59.466 40.000 0.00 0.00 0.00 2.08
3682 3754 5.447757 TCTGCATGGATGGTTTGATTGATA 58.552 37.500 0.00 0.00 0.00 2.15
3683 3755 4.283337 TCTGCATGGATGGTTTGATTGAT 58.717 39.130 0.00 0.00 0.00 2.57
3684 3756 3.697542 CTCTGCATGGATGGTTTGATTGA 59.302 43.478 0.00 0.00 0.00 2.57
3685 3757 3.181479 CCTCTGCATGGATGGTTTGATTG 60.181 47.826 0.00 0.00 0.00 2.67
3686 3758 3.028850 CCTCTGCATGGATGGTTTGATT 58.971 45.455 0.00 0.00 0.00 2.57
3687 3759 2.242965 TCCTCTGCATGGATGGTTTGAT 59.757 45.455 4.66 0.00 0.00 2.57
3688 3760 1.634973 TCCTCTGCATGGATGGTTTGA 59.365 47.619 4.66 0.00 0.00 2.69
3689 3761 2.133281 TCCTCTGCATGGATGGTTTG 57.867 50.000 4.66 0.00 0.00 2.93
3690 3762 4.524802 TTATCCTCTGCATGGATGGTTT 57.475 40.909 23.67 7.57 43.48 3.27
3691 3763 4.079558 AGTTTATCCTCTGCATGGATGGTT 60.080 41.667 23.67 7.86 43.48 3.67
3692 3764 3.461085 AGTTTATCCTCTGCATGGATGGT 59.539 43.478 23.67 8.14 43.48 3.55
3693 3765 3.819337 CAGTTTATCCTCTGCATGGATGG 59.181 47.826 23.67 7.65 43.48 3.51
3694 3766 4.458397 ACAGTTTATCCTCTGCATGGATG 58.542 43.478 23.67 14.55 43.48 3.51
3695 3767 4.785346 ACAGTTTATCCTCTGCATGGAT 57.215 40.909 20.53 20.53 45.37 3.41
3696 3768 4.443457 GCTACAGTTTATCCTCTGCATGGA 60.443 45.833 10.46 10.46 38.06 3.41
3697 3769 3.812053 GCTACAGTTTATCCTCTGCATGG 59.188 47.826 0.00 0.00 35.37 3.66
3698 3770 4.272018 GTGCTACAGTTTATCCTCTGCATG 59.728 45.833 0.00 0.00 35.37 4.06
3699 3771 4.080919 TGTGCTACAGTTTATCCTCTGCAT 60.081 41.667 0.00 0.00 35.37 3.96
3700 3772 3.260632 TGTGCTACAGTTTATCCTCTGCA 59.739 43.478 0.00 0.00 35.37 4.41
3701 3773 3.861840 TGTGCTACAGTTTATCCTCTGC 58.138 45.455 0.00 0.00 35.37 4.26
3702 3774 4.631813 GGTTGTGCTACAGTTTATCCTCTG 59.368 45.833 0.00 0.00 37.65 3.35
3703 3775 4.286032 TGGTTGTGCTACAGTTTATCCTCT 59.714 41.667 0.00 0.00 0.00 3.69
3704 3776 4.575885 TGGTTGTGCTACAGTTTATCCTC 58.424 43.478 0.00 0.00 0.00 3.71
3705 3777 4.634012 TGGTTGTGCTACAGTTTATCCT 57.366 40.909 0.00 0.00 0.00 3.24
3706 3778 5.393027 CCAATGGTTGTGCTACAGTTTATCC 60.393 44.000 0.00 0.00 0.00 2.59
3707 3779 5.414454 TCCAATGGTTGTGCTACAGTTTATC 59.586 40.000 0.00 0.00 0.00 1.75
3708 3780 5.321102 TCCAATGGTTGTGCTACAGTTTAT 58.679 37.500 0.00 0.00 0.00 1.40
3709 3781 4.720046 TCCAATGGTTGTGCTACAGTTTA 58.280 39.130 0.00 0.00 0.00 2.01
3710 3782 3.561143 TCCAATGGTTGTGCTACAGTTT 58.439 40.909 0.00 0.00 0.00 2.66
3711 3783 3.222173 TCCAATGGTTGTGCTACAGTT 57.778 42.857 0.00 0.00 0.00 3.16
3712 3784 2.949177 TCCAATGGTTGTGCTACAGT 57.051 45.000 0.00 0.00 0.00 3.55
3713 3785 3.084039 ACATCCAATGGTTGTGCTACAG 58.916 45.455 14.61 0.00 34.73 2.74
3714 3786 3.153369 ACATCCAATGGTTGTGCTACA 57.847 42.857 14.61 0.00 34.73 2.74
3715 3787 4.094887 CACTACATCCAATGGTTGTGCTAC 59.905 45.833 22.43 0.00 36.45 3.58
3716 3788 4.260985 CACTACATCCAATGGTTGTGCTA 58.739 43.478 22.43 5.46 36.45 3.49
3717 3789 3.084039 CACTACATCCAATGGTTGTGCT 58.916 45.455 22.43 7.39 36.45 4.40
3718 3790 2.819608 ACACTACATCCAATGGTTGTGC 59.180 45.455 22.43 0.00 36.45 4.57
3719 3791 3.125146 CGACACTACATCCAATGGTTGTG 59.875 47.826 22.43 15.35 36.45 3.33
3720 3792 3.244422 ACGACACTACATCCAATGGTTGT 60.244 43.478 18.68 18.68 38.85 3.32
3721 3793 3.334691 ACGACACTACATCCAATGGTTG 58.665 45.455 8.70 8.70 33.60 3.77
3722 3794 3.260884 AGACGACACTACATCCAATGGTT 59.739 43.478 0.00 0.00 33.60 3.67
3723 3795 2.832129 AGACGACACTACATCCAATGGT 59.168 45.455 0.00 0.00 33.60 3.55
3724 3796 3.448686 GAGACGACACTACATCCAATGG 58.551 50.000 0.00 0.00 33.60 3.16
3725 3797 3.119137 TGGAGACGACACTACATCCAATG 60.119 47.826 0.00 0.00 34.02 2.82
3726 3798 3.096852 TGGAGACGACACTACATCCAAT 58.903 45.455 0.00 0.00 34.02 3.16
3727 3799 2.521126 TGGAGACGACACTACATCCAA 58.479 47.619 0.00 0.00 34.02 3.53
3728 3800 2.209690 TGGAGACGACACTACATCCA 57.790 50.000 0.00 0.00 34.54 3.41
3729 3801 3.587797 TTTGGAGACGACACTACATCC 57.412 47.619 0.00 0.00 30.29 3.51
3730 3802 3.791887 CGATTTGGAGACGACACTACATC 59.208 47.826 0.00 0.00 30.29 3.06
3731 3803 3.428999 CCGATTTGGAGACGACACTACAT 60.429 47.826 0.00 0.00 42.00 2.29
3732 3804 2.094906 CCGATTTGGAGACGACACTACA 60.095 50.000 0.00 0.00 42.00 2.74
3733 3805 2.527100 CCGATTTGGAGACGACACTAC 58.473 52.381 0.00 0.00 42.00 2.73
3734 3806 1.135199 GCCGATTTGGAGACGACACTA 60.135 52.381 0.00 0.00 42.00 2.74
3735 3807 0.389948 GCCGATTTGGAGACGACACT 60.390 55.000 0.00 0.00 42.00 3.55
3736 3808 1.359459 GGCCGATTTGGAGACGACAC 61.359 60.000 0.00 0.00 42.00 3.67
3737 3809 1.079405 GGCCGATTTGGAGACGACA 60.079 57.895 0.00 0.00 42.00 4.35
3738 3810 1.079405 TGGCCGATTTGGAGACGAC 60.079 57.895 0.00 0.00 42.00 4.34
3739 3811 1.218047 CTGGCCGATTTGGAGACGA 59.782 57.895 0.00 0.00 42.00 4.20
3740 3812 2.464459 GCTGGCCGATTTGGAGACG 61.464 63.158 0.00 0.00 42.00 4.18
3741 3813 2.464459 CGCTGGCCGATTTGGAGAC 61.464 63.158 0.00 0.00 42.00 3.36
3742 3814 2.125147 CGCTGGCCGATTTGGAGA 60.125 61.111 0.00 0.00 42.00 3.71
3743 3815 2.436646 ACGCTGGCCGATTTGGAG 60.437 61.111 0.00 0.00 42.00 3.86
3744 3816 2.745884 CACGCTGGCCGATTTGGA 60.746 61.111 0.00 0.00 42.00 3.53
3745 3817 3.055719 ACACGCTGGCCGATTTGG 61.056 61.111 0.00 0.00 41.02 3.28
3746 3818 2.176546 CACACGCTGGCCGATTTG 59.823 61.111 0.00 0.00 41.02 2.32
3747 3819 2.281484 ACACACGCTGGCCGATTT 60.281 55.556 0.00 0.00 41.02 2.17
3748 3820 2.742372 GACACACGCTGGCCGATT 60.742 61.111 0.00 0.00 41.02 3.34
3752 3824 3.276846 AAACGACACACGCTGGCC 61.277 61.111 0.00 0.00 46.94 5.36
3753 3825 2.052237 CAAACGACACACGCTGGC 60.052 61.111 0.00 0.00 46.94 4.85
3754 3826 1.218875 TAGCAAACGACACACGCTGG 61.219 55.000 0.00 0.00 46.94 4.85
3755 3827 0.579630 TTAGCAAACGACACACGCTG 59.420 50.000 0.00 0.00 46.94 5.18
3756 3828 0.859232 CTTAGCAAACGACACACGCT 59.141 50.000 0.00 0.00 46.94 5.07
3757 3829 0.580104 ACTTAGCAAACGACACACGC 59.420 50.000 0.00 0.00 46.94 5.34
3759 3831 5.399604 AAACTACTTAGCAAACGACACAC 57.600 39.130 0.00 0.00 0.00 3.82
3760 3832 4.207635 CGAAACTACTTAGCAAACGACACA 59.792 41.667 0.00 0.00 0.00 3.72
3761 3833 4.207841 ACGAAACTACTTAGCAAACGACAC 59.792 41.667 0.00 0.00 0.00 3.67
3762 3834 4.362279 ACGAAACTACTTAGCAAACGACA 58.638 39.130 0.00 0.00 0.00 4.35
3763 3835 4.961433 ACGAAACTACTTAGCAAACGAC 57.039 40.909 0.00 0.00 0.00 4.34
3764 3836 4.805192 ACAACGAAACTACTTAGCAAACGA 59.195 37.500 0.00 0.00 0.00 3.85
3765 3837 5.051240 AGACAACGAAACTACTTAGCAAACG 60.051 40.000 0.00 0.00 0.00 3.60
3766 3838 6.283161 AGACAACGAAACTACTTAGCAAAC 57.717 37.500 0.00 0.00 0.00 2.93
3767 3839 8.330302 GTTTAGACAACGAAACTACTTAGCAAA 58.670 33.333 0.00 0.00 38.15 3.68
3768 3840 7.492020 TGTTTAGACAACGAAACTACTTAGCAA 59.508 33.333 0.00 0.00 40.47 3.91
3769 3841 6.979817 TGTTTAGACAACGAAACTACTTAGCA 59.020 34.615 0.00 0.00 40.47 3.49
3770 3842 7.398834 TGTTTAGACAACGAAACTACTTAGC 57.601 36.000 0.00 0.00 40.47 3.09
3784 3856 3.226777 CCCCCACATGTTGTTTAGACAA 58.773 45.455 0.00 0.00 43.23 3.18
3785 3857 2.870175 CCCCCACATGTTGTTTAGACA 58.130 47.619 0.00 0.00 0.00 3.41
4028 4101 2.438392 CCCCTACAACCTCACCCTATTC 59.562 54.545 0.00 0.00 0.00 1.75
4030 4103 1.654997 TCCCCTACAACCTCACCCTAT 59.345 52.381 0.00 0.00 0.00 2.57
4031 4104 1.007963 CTCCCCTACAACCTCACCCTA 59.992 57.143 0.00 0.00 0.00 3.53
4032 4105 0.252742 CTCCCCTACAACCTCACCCT 60.253 60.000 0.00 0.00 0.00 4.34
4035 4108 1.652947 TTCCTCCCCTACAACCTCAC 58.347 55.000 0.00 0.00 0.00 3.51
4227 4315 3.171987 GCACATCACAGCCAGTCG 58.828 61.111 0.00 0.00 0.00 4.18
4467 4587 0.458889 CCCTTTGCATGCGTCCAATG 60.459 55.000 14.09 3.97 0.00 2.82
4468 4588 0.899717 ACCCTTTGCATGCGTCCAAT 60.900 50.000 14.09 0.00 0.00 3.16
4469 4589 1.112315 AACCCTTTGCATGCGTCCAA 61.112 50.000 14.09 0.00 0.00 3.53
4470 4590 1.530419 AACCCTTTGCATGCGTCCA 60.530 52.632 14.09 0.00 0.00 4.02
4471 4591 1.080569 CAACCCTTTGCATGCGTCC 60.081 57.895 14.09 0.00 0.00 4.79
4488 4608 0.106967 TAAGTTGCCTGGCACACACA 60.107 50.000 23.30 2.76 38.71 3.72
4489 4609 0.593128 CTAAGTTGCCTGGCACACAC 59.407 55.000 23.30 17.34 38.71 3.82
4490 4610 0.182537 ACTAAGTTGCCTGGCACACA 59.817 50.000 23.30 3.67 38.71 3.72
4491 4611 0.593128 CACTAAGTTGCCTGGCACAC 59.407 55.000 23.30 20.96 38.71 3.82
4494 4614 1.953686 GTTTCACTAAGTTGCCTGGCA 59.046 47.619 19.30 19.30 36.47 4.92
4495 4615 1.953686 TGTTTCACTAAGTTGCCTGGC 59.046 47.619 12.87 12.87 0.00 4.85
4496 4616 3.476552 TCTGTTTCACTAAGTTGCCTGG 58.523 45.455 0.00 0.00 0.00 4.45
4497 4617 4.380531 TCTCTGTTTCACTAAGTTGCCTG 58.619 43.478 0.00 0.00 0.00 4.85
4498 4618 4.689612 TCTCTGTTTCACTAAGTTGCCT 57.310 40.909 0.00 0.00 0.00 4.75
4499 4619 5.050023 GTCTTCTCTGTTTCACTAAGTTGCC 60.050 44.000 0.00 0.00 0.00 4.52
4500 4620 5.050023 GGTCTTCTCTGTTTCACTAAGTTGC 60.050 44.000 0.00 0.00 0.00 4.17
4501 4621 6.049149 TGGTCTTCTCTGTTTCACTAAGTTG 58.951 40.000 0.00 0.00 0.00 3.16
4502 4622 6.235231 TGGTCTTCTCTGTTTCACTAAGTT 57.765 37.500 0.00 0.00 0.00 2.66
4511 4631 5.619086 CGTTGTTTGTTGGTCTTCTCTGTTT 60.619 40.000 0.00 0.00 0.00 2.83
4559 4679 9.075678 AGATTATGCCTCCAAATCTAAATTCAG 57.924 33.333 0.00 0.00 38.01 3.02
4618 4738 9.909644 GGTCGCAGTTTATATATAGAAGAAGAA 57.090 33.333 0.00 0.00 0.00 2.52
4619 4739 9.074576 TGGTCGCAGTTTATATATAGAAGAAGA 57.925 33.333 0.00 0.00 0.00 2.87
4620 4740 9.692749 TTGGTCGCAGTTTATATATAGAAGAAG 57.307 33.333 0.00 0.00 0.00 2.85
4621 4741 9.692749 CTTGGTCGCAGTTTATATATAGAAGAA 57.307 33.333 0.00 0.00 0.00 2.52
4622 4742 9.074576 TCTTGGTCGCAGTTTATATATAGAAGA 57.925 33.333 0.00 0.00 0.00 2.87
4623 4743 9.862371 ATCTTGGTCGCAGTTTATATATAGAAG 57.138 33.333 0.00 0.00 0.00 2.85
4624 4744 9.856488 GATCTTGGTCGCAGTTTATATATAGAA 57.144 33.333 0.00 0.00 0.00 2.10
4625 4745 9.020731 TGATCTTGGTCGCAGTTTATATATAGA 57.979 33.333 0.00 0.00 0.00 1.98
4626 4746 9.639601 TTGATCTTGGTCGCAGTTTATATATAG 57.360 33.333 0.00 0.00 0.00 1.31
4627 4747 9.639601 CTTGATCTTGGTCGCAGTTTATATATA 57.360 33.333 0.00 0.00 0.00 0.86
4628 4748 7.118390 GCTTGATCTTGGTCGCAGTTTATATAT 59.882 37.037 0.00 0.00 0.00 0.86
4629 4749 6.423905 GCTTGATCTTGGTCGCAGTTTATATA 59.576 38.462 0.00 0.00 0.00 0.86
4630 4750 5.237344 GCTTGATCTTGGTCGCAGTTTATAT 59.763 40.000 0.00 0.00 0.00 0.86
4631 4751 4.570772 GCTTGATCTTGGTCGCAGTTTATA 59.429 41.667 0.00 0.00 0.00 0.98
4632 4752 3.375299 GCTTGATCTTGGTCGCAGTTTAT 59.625 43.478 0.00 0.00 0.00 1.40
4633 4753 2.742053 GCTTGATCTTGGTCGCAGTTTA 59.258 45.455 0.00 0.00 0.00 2.01
4634 4754 1.537202 GCTTGATCTTGGTCGCAGTTT 59.463 47.619 0.00 0.00 0.00 2.66
4635 4755 1.160137 GCTTGATCTTGGTCGCAGTT 58.840 50.000 0.00 0.00 0.00 3.16
4636 4756 0.674895 GGCTTGATCTTGGTCGCAGT 60.675 55.000 0.00 0.00 0.00 4.40
4637 4757 0.674581 TGGCTTGATCTTGGTCGCAG 60.675 55.000 0.00 0.00 0.00 5.18
4638 4758 0.035152 ATGGCTTGATCTTGGTCGCA 60.035 50.000 0.00 0.00 0.00 5.10
4639 4759 0.659957 GATGGCTTGATCTTGGTCGC 59.340 55.000 0.00 0.00 0.00 5.19
4640 4760 1.134280 AGGATGGCTTGATCTTGGTCG 60.134 52.381 0.00 0.00 0.00 4.79
4641 4761 2.092753 TGAGGATGGCTTGATCTTGGTC 60.093 50.000 0.00 0.00 0.00 4.02
4642 4762 1.918262 TGAGGATGGCTTGATCTTGGT 59.082 47.619 0.00 0.00 0.00 3.67
4643 4763 2.723322 TGAGGATGGCTTGATCTTGG 57.277 50.000 0.00 0.00 0.00 3.61
4644 4764 2.806818 CGATGAGGATGGCTTGATCTTG 59.193 50.000 0.00 0.00 0.00 3.02
4645 4765 2.437281 ACGATGAGGATGGCTTGATCTT 59.563 45.455 0.00 0.00 0.00 2.40
4646 4766 2.045524 ACGATGAGGATGGCTTGATCT 58.954 47.619 0.00 0.00 0.00 2.75
4647 4767 2.540265 ACGATGAGGATGGCTTGATC 57.460 50.000 0.00 0.00 0.00 2.92
4648 4768 3.234353 TCTACGATGAGGATGGCTTGAT 58.766 45.455 0.00 0.00 0.00 2.57
4649 4769 2.625314 CTCTACGATGAGGATGGCTTGA 59.375 50.000 0.00 0.00 0.00 3.02
4650 4770 2.363680 ACTCTACGATGAGGATGGCTTG 59.636 50.000 12.37 0.00 38.32 4.01
4651 4771 2.672098 ACTCTACGATGAGGATGGCTT 58.328 47.619 12.37 0.00 38.32 4.35
4652 4772 2.373335 ACTCTACGATGAGGATGGCT 57.627 50.000 12.37 0.00 38.32 4.75
4653 4773 4.585955 TTTACTCTACGATGAGGATGGC 57.414 45.455 12.37 0.00 38.32 4.40
4654 4774 6.207614 TCTCATTTACTCTACGATGAGGATGG 59.792 42.308 11.08 8.32 43.47 3.51
4655 4775 7.208225 TCTCATTTACTCTACGATGAGGATG 57.792 40.000 11.08 12.04 43.47 3.51
4656 4776 7.721842 TCTTCTCATTTACTCTACGATGAGGAT 59.278 37.037 11.08 3.33 43.47 3.24
4657 4777 7.054751 TCTTCTCATTTACTCTACGATGAGGA 58.945 38.462 11.08 3.33 43.47 3.71
4658 4778 7.265647 TCTTCTCATTTACTCTACGATGAGG 57.734 40.000 11.08 0.00 43.47 3.86
4659 4779 8.783093 AGATCTTCTCATTTACTCTACGATGAG 58.217 37.037 5.98 5.98 44.23 2.90
4660 4780 8.684386 AGATCTTCTCATTTACTCTACGATGA 57.316 34.615 0.00 0.00 0.00 2.92
4661 4781 8.783093 AGAGATCTTCTCATTTACTCTACGATG 58.217 37.037 0.00 0.00 45.73 3.84
4662 4782 8.918202 AGAGATCTTCTCATTTACTCTACGAT 57.082 34.615 0.00 0.00 45.73 3.73
4663 4783 8.616942 CAAGAGATCTTCTCATTTACTCTACGA 58.383 37.037 0.00 0.00 45.73 3.43
4664 4784 8.402472 ACAAGAGATCTTCTCATTTACTCTACG 58.598 37.037 0.00 0.00 45.73 3.51
4667 4787 9.651913 GAAACAAGAGATCTTCTCATTTACTCT 57.348 33.333 0.00 0.00 45.73 3.24
4668 4788 9.429359 TGAAACAAGAGATCTTCTCATTTACTC 57.571 33.333 0.00 0.00 45.73 2.59
4669 4789 9.213799 GTGAAACAAGAGATCTTCTCATTTACT 57.786 33.333 0.00 0.00 40.80 2.24
4670 4790 8.165428 CGTGAAACAAGAGATCTTCTCATTTAC 58.835 37.037 0.00 0.00 41.04 2.01
4671 4791 7.331934 CCGTGAAACAAGAGATCTTCTCATTTA 59.668 37.037 0.00 0.00 41.04 1.40
4672 4792 6.148480 CCGTGAAACAAGAGATCTTCTCATTT 59.852 38.462 0.00 4.73 41.04 2.32
4673 4793 5.641209 CCGTGAAACAAGAGATCTTCTCATT 59.359 40.000 0.00 0.00 41.04 2.57
4674 4794 5.047021 TCCGTGAAACAAGAGATCTTCTCAT 60.047 40.000 0.00 0.00 41.04 2.90
4675 4795 4.280929 TCCGTGAAACAAGAGATCTTCTCA 59.719 41.667 0.00 0.00 41.04 3.27
4676 4796 4.810790 TCCGTGAAACAAGAGATCTTCTC 58.189 43.478 0.00 0.00 39.56 2.87
4677 4797 4.873746 TCCGTGAAACAAGAGATCTTCT 57.126 40.909 0.00 0.00 35.74 2.85
4678 4798 4.568760 GGATCCGTGAAACAAGAGATCTTC 59.431 45.833 0.00 0.00 35.74 2.87
4679 4799 4.508662 GGATCCGTGAAACAAGAGATCTT 58.491 43.478 0.00 0.00 35.74 2.40
4680 4800 3.429547 CGGATCCGTGAAACAAGAGATCT 60.430 47.826 26.35 0.00 35.74 2.75
4681 4801 2.860735 CGGATCCGTGAAACAAGAGATC 59.139 50.000 26.35 0.00 35.74 2.75
4682 4802 2.893637 CGGATCCGTGAAACAAGAGAT 58.106 47.619 26.35 0.00 35.74 2.75
4683 4803 2.363788 CGGATCCGTGAAACAAGAGA 57.636 50.000 26.35 0.00 35.74 3.10
4695 4815 1.006832 AGAAAAATGCGACGGATCCG 58.993 50.000 32.20 32.20 46.03 4.18
4696 4816 3.487563 AAAGAAAAATGCGACGGATCC 57.512 42.857 1.16 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.