Multiple sequence alignment - TraesCS3B01G124400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G124400 chr3B 100.000 6020 0 0 1 6020 97753217 97759236 0.000000e+00 11117
1 TraesCS3B01G124400 chr3D 95.817 3419 89 19 445 3814 61591736 61595149 0.000000e+00 5472
2 TraesCS3B01G124400 chr3D 94.039 2030 85 21 3808 5818 61595392 61597404 0.000000e+00 3046
3 TraesCS3B01G124400 chr3A 93.183 2714 117 33 1912 4594 69661767 69664443 0.000000e+00 3925
4 TraesCS3B01G124400 chr3A 90.681 1631 93 33 314 1921 69660148 69661742 0.000000e+00 2115
5 TraesCS3B01G124400 chr3A 92.483 745 52 3 4645 5385 69664452 69665196 0.000000e+00 1062
6 TraesCS3B01G124400 chr3A 80.274 583 63 25 5421 5986 69665195 69665742 5.660000e-105 392
7 TraesCS3B01G124400 chr3A 89.011 273 25 2 2659 2926 388358275 388358547 3.480000e-87 333
8 TraesCS3B01G124400 chr3A 88.889 270 26 1 2662 2927 706867796 706868065 4.500000e-86 329
9 TraesCS3B01G124400 chr2B 92.812 320 16 3 1 314 643124793 643124475 1.980000e-124 457
10 TraesCS3B01G124400 chr2B 91.562 320 19 3 1 314 451897047 451897364 9.270000e-118 435
11 TraesCS3B01G124400 chr2B 90.076 262 20 2 2669 2926 19081507 19081766 9.670000e-88 335
12 TraesCS3B01G124400 chr2B 89.394 264 24 3 2666 2926 19099196 19099458 4.500000e-86 329
13 TraesCS3B01G124400 chr5D 92.500 320 18 2 1 314 391994558 391994239 2.560000e-123 453
14 TraesCS3B01G124400 chr4A 92.260 323 18 3 1 316 669350377 669350699 9.200000e-123 451
15 TraesCS3B01G124400 chr4A 88.645 273 26 2 2659 2926 165816556 165816284 1.620000e-85 327
16 TraesCS3B01G124400 chr4A 88.686 274 24 4 2659 2926 480001628 480001356 1.620000e-85 327
17 TraesCS3B01G124400 chr7B 91.900 321 20 2 1 315 603838265 603837945 1.540000e-120 444
18 TraesCS3B01G124400 chr1D 91.692 325 20 4 1 319 369900251 369899928 1.540000e-120 444
19 TraesCS3B01G124400 chr5B 91.589 321 21 2 1 315 680629243 680629563 7.160000e-119 438
20 TraesCS3B01G124400 chr1B 91.562 320 21 2 2 315 21280670 21280351 2.580000e-118 436
21 TraesCS3B01G124400 chr6B 91.277 321 22 2 1 315 41898828 41899148 3.330000e-117 433
22 TraesCS3B01G124400 chrUn 89.513 267 24 1 2665 2927 87229953 87229687 9.670000e-88 335


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G124400 chr3B 97753217 97759236 6019 False 11117.0 11117 100.00000 1 6020 1 chr3B.!!$F1 6019
1 TraesCS3B01G124400 chr3D 61591736 61597404 5668 False 4259.0 5472 94.92800 445 5818 2 chr3D.!!$F1 5373
2 TraesCS3B01G124400 chr3A 69660148 69665742 5594 False 1873.5 3925 89.15525 314 5986 4 chr3A.!!$F3 5672

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
240 241 0.029834 GTGCGATGCAAGCCCAATAG 59.970 55.000 13.83 0.00 41.47 1.73 F
242 243 0.029834 GCGATGCAAGCCCAATAGTG 59.970 55.000 6.28 0.00 0.00 2.74 F
570 597 0.042581 TATGGGCTGTGACAGGGAGA 59.957 55.000 15.24 0.00 31.21 3.71 F
581 608 0.327000 ACAGGGAGATCAAGAGGGGG 60.327 60.000 0.00 0.00 0.00 5.40 F
1851 1908 1.168407 GCTTTCTGCACAGTGAGCCA 61.168 55.000 10.18 0.00 42.31 4.75 F
2569 2681 0.550147 ACTGGAAGGTATGGTGGCCT 60.550 55.000 3.32 0.00 39.30 5.19 F
3861 4230 2.813754 GGTTGCACATTTACTCAGCTGA 59.186 45.455 17.19 17.19 0.00 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1809 1866 1.068748 GTCTCGACGTGAAGCACCTTA 60.069 52.381 0.00 0.0 0.00 2.69 R
1836 1893 2.031616 GCTGGCTCACTGTGCAGA 59.968 61.111 15.23 0.0 0.00 4.26 R
2296 2392 3.537795 ACTACACCAGACCTCTACCAA 57.462 47.619 0.00 0.0 0.00 3.67 R
2569 2681 6.310941 TCAAGTGGGGAAAAACAATCAGATA 58.689 36.000 0.00 0.0 0.00 1.98 R
3579 3695 3.780294 AGGTATATTCTTGCTCACCCACA 59.220 43.478 0.00 0.0 0.00 4.17 R
4145 4515 4.393062 GCTGTTGCTAACTTGCTATCTCAA 59.607 41.667 0.00 0.0 36.03 3.02 R
5486 5860 0.394216 TATCGCCTGCCTGCAACAAT 60.394 50.000 0.00 0.0 0.00 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.827898 GCCGGTGAGAGTCGGGAG 61.828 72.222 1.90 0.00 45.75 4.30
21 22 2.045242 CCGGTGAGAGTCGGGAGA 60.045 66.667 0.00 0.00 42.32 3.71
22 23 2.115911 CCGGTGAGAGTCGGGAGAG 61.116 68.421 0.00 0.00 42.32 3.20
24 25 1.649390 CGGTGAGAGTCGGGAGAGTG 61.649 65.000 0.00 0.00 43.98 3.51
25 26 1.316706 GGTGAGAGTCGGGAGAGTGG 61.317 65.000 0.00 0.00 43.98 4.00
26 27 1.000771 TGAGAGTCGGGAGAGTGGG 60.001 63.158 0.00 0.00 43.98 4.61
27 28 1.755008 GAGAGTCGGGAGAGTGGGG 60.755 68.421 0.00 0.00 43.98 4.96
28 29 2.212794 GAGAGTCGGGAGAGTGGGGA 62.213 65.000 0.00 0.00 43.98 4.81
29 30 1.305046 GAGTCGGGAGAGTGGGGAA 60.305 63.158 0.00 0.00 43.98 3.97
30 31 1.305381 AGTCGGGAGAGTGGGGAAG 60.305 63.158 0.00 0.00 41.95 3.46
31 32 1.305046 GTCGGGAGAGTGGGGAAGA 60.305 63.158 0.00 0.00 41.26 2.87
32 33 1.000486 TCGGGAGAGTGGGGAAGAG 60.000 63.158 0.00 0.00 0.00 2.85
33 34 1.305381 CGGGAGAGTGGGGAAGAGT 60.305 63.158 0.00 0.00 0.00 3.24
34 35 1.608717 CGGGAGAGTGGGGAAGAGTG 61.609 65.000 0.00 0.00 0.00 3.51
35 36 1.268283 GGGAGAGTGGGGAAGAGTGG 61.268 65.000 0.00 0.00 0.00 4.00
36 37 1.268283 GGAGAGTGGGGAAGAGTGGG 61.268 65.000 0.00 0.00 0.00 4.61
37 38 1.229658 AGAGTGGGGAAGAGTGGGG 60.230 63.158 0.00 0.00 0.00 4.96
38 39 1.229529 GAGTGGGGAAGAGTGGGGA 60.230 63.158 0.00 0.00 0.00 4.81
39 40 0.840722 GAGTGGGGAAGAGTGGGGAA 60.841 60.000 0.00 0.00 0.00 3.97
40 41 0.842467 AGTGGGGAAGAGTGGGGAAG 60.842 60.000 0.00 0.00 0.00 3.46
41 42 1.541368 TGGGGAAGAGTGGGGAAGG 60.541 63.158 0.00 0.00 0.00 3.46
42 43 2.309504 GGGGAAGAGTGGGGAAGGG 61.310 68.421 0.00 0.00 0.00 3.95
43 44 1.229853 GGGAAGAGTGGGGAAGGGA 60.230 63.158 0.00 0.00 0.00 4.20
44 45 1.275421 GGGAAGAGTGGGGAAGGGAG 61.275 65.000 0.00 0.00 0.00 4.30
45 46 1.604915 GAAGAGTGGGGAAGGGAGC 59.395 63.158 0.00 0.00 0.00 4.70
46 47 2.245438 GAAGAGTGGGGAAGGGAGCG 62.245 65.000 0.00 0.00 0.00 5.03
47 48 3.787001 GAGTGGGGAAGGGAGCGG 61.787 72.222 0.00 0.00 0.00 5.52
48 49 4.658786 AGTGGGGAAGGGAGCGGT 62.659 66.667 0.00 0.00 0.00 5.68
49 50 4.410400 GTGGGGAAGGGAGCGGTG 62.410 72.222 0.00 0.00 0.00 4.94
50 51 4.649705 TGGGGAAGGGAGCGGTGA 62.650 66.667 0.00 0.00 0.00 4.02
51 52 3.787001 GGGGAAGGGAGCGGTGAG 61.787 72.222 0.00 0.00 0.00 3.51
52 53 3.787001 GGGAAGGGAGCGGTGAGG 61.787 72.222 0.00 0.00 0.00 3.86
53 54 3.787001 GGAAGGGAGCGGTGAGGG 61.787 72.222 0.00 0.00 0.00 4.30
54 55 3.787001 GAAGGGAGCGGTGAGGGG 61.787 72.222 0.00 0.00 0.00 4.79
65 66 4.392166 TGAGGGGCGGTGAGGCTA 62.392 66.667 0.00 0.00 45.89 3.93
66 67 3.081409 GAGGGGCGGTGAGGCTAA 61.081 66.667 0.00 0.00 45.89 3.09
67 68 2.366972 AGGGGCGGTGAGGCTAAT 60.367 61.111 0.00 0.00 45.89 1.73
68 69 1.074775 AGGGGCGGTGAGGCTAATA 60.075 57.895 0.00 0.00 45.89 0.98
69 70 0.693092 AGGGGCGGTGAGGCTAATAA 60.693 55.000 0.00 0.00 45.89 1.40
70 71 0.534427 GGGGCGGTGAGGCTAATAAC 60.534 60.000 0.00 0.00 45.89 1.89
71 72 0.468648 GGGCGGTGAGGCTAATAACT 59.531 55.000 0.00 0.00 45.89 2.24
72 73 1.134189 GGGCGGTGAGGCTAATAACTT 60.134 52.381 0.00 0.00 45.89 2.66
73 74 2.210961 GGCGGTGAGGCTAATAACTTC 58.789 52.381 0.00 0.00 42.90 3.01
74 75 2.210961 GCGGTGAGGCTAATAACTTCC 58.789 52.381 0.00 0.00 0.00 3.46
75 76 2.470821 CGGTGAGGCTAATAACTTCCG 58.529 52.381 0.00 0.00 0.00 4.30
76 77 2.802057 CGGTGAGGCTAATAACTTCCGG 60.802 54.545 0.00 0.00 33.87 5.14
77 78 2.169978 GGTGAGGCTAATAACTTCCGGT 59.830 50.000 0.00 0.00 0.00 5.28
78 79 3.195661 GTGAGGCTAATAACTTCCGGTG 58.804 50.000 0.00 0.00 0.00 4.94
79 80 2.210961 GAGGCTAATAACTTCCGGTGC 58.789 52.381 0.00 0.00 0.00 5.01
80 81 1.838077 AGGCTAATAACTTCCGGTGCT 59.162 47.619 0.00 0.00 0.00 4.40
81 82 2.238898 AGGCTAATAACTTCCGGTGCTT 59.761 45.455 0.00 0.00 0.00 3.91
82 83 2.612672 GGCTAATAACTTCCGGTGCTTC 59.387 50.000 0.00 0.00 0.00 3.86
83 84 2.284417 GCTAATAACTTCCGGTGCTTCG 59.716 50.000 0.00 0.00 0.00 3.79
96 97 3.788766 CTTCGGGAAGCAACGCGG 61.789 66.667 12.47 0.00 44.19 6.46
104 105 4.357947 AGCAACGCGGCTTCTCGA 62.358 61.111 12.47 0.00 42.71 4.04
105 106 3.843240 GCAACGCGGCTTCTCGAG 61.843 66.667 12.47 5.93 36.10 4.04
113 114 2.876645 GCTTCTCGAGCGTGTCCG 60.877 66.667 7.81 0.00 42.46 4.79
168 169 2.440599 GGCCTGGCCTTGGAGAAA 59.559 61.111 30.42 0.00 46.69 2.52
169 170 1.979155 GGCCTGGCCTTGGAGAAAC 60.979 63.158 30.42 0.00 46.69 2.78
170 171 1.075659 GCCTGGCCTTGGAGAAACT 59.924 57.895 17.65 0.00 0.00 2.66
171 172 1.246737 GCCTGGCCTTGGAGAAACTG 61.247 60.000 17.65 0.00 0.00 3.16
172 173 1.246737 CCTGGCCTTGGAGAAACTGC 61.247 60.000 3.32 0.00 0.00 4.40
173 174 1.228552 TGGCCTTGGAGAAACTGCC 60.229 57.895 3.32 0.00 39.33 4.85
174 175 1.228552 GGCCTTGGAGAAACTGCCA 60.229 57.895 0.00 0.00 38.73 4.92
175 176 0.827507 GGCCTTGGAGAAACTGCCAA 60.828 55.000 0.00 0.00 41.61 4.52
176 177 1.260544 GCCTTGGAGAAACTGCCAAT 58.739 50.000 0.00 0.00 42.79 3.16
177 178 1.620323 GCCTTGGAGAAACTGCCAATT 59.380 47.619 0.00 0.00 42.79 2.32
178 179 2.353109 GCCTTGGAGAAACTGCCAATTC 60.353 50.000 0.00 0.00 42.79 2.17
179 180 2.095059 CCTTGGAGAAACTGCCAATTCG 60.095 50.000 0.00 0.00 42.79 3.34
180 181 2.270352 TGGAGAAACTGCCAATTCGT 57.730 45.000 0.00 0.00 0.00 3.85
181 182 1.879380 TGGAGAAACTGCCAATTCGTG 59.121 47.619 0.00 0.00 0.00 4.35
182 183 1.401539 GGAGAAACTGCCAATTCGTGC 60.402 52.381 0.00 0.00 0.00 5.34
183 184 0.238289 AGAAACTGCCAATTCGTGCG 59.762 50.000 0.00 0.00 0.00 5.34
184 185 0.040425 GAAACTGCCAATTCGTGCGT 60.040 50.000 0.00 0.00 0.00 5.24
185 186 0.383949 AAACTGCCAATTCGTGCGTT 59.616 45.000 0.00 0.00 0.00 4.84
186 187 0.040425 AACTGCCAATTCGTGCGTTC 60.040 50.000 0.00 0.00 0.00 3.95
187 188 1.154225 CTGCCAATTCGTGCGTTCC 60.154 57.895 0.00 0.00 0.00 3.62
188 189 1.577328 CTGCCAATTCGTGCGTTCCT 61.577 55.000 0.00 0.00 0.00 3.36
189 190 0.320858 TGCCAATTCGTGCGTTCCTA 60.321 50.000 0.00 0.00 0.00 2.94
190 191 0.373716 GCCAATTCGTGCGTTCCTAG 59.626 55.000 0.00 0.00 0.00 3.02
191 192 1.722011 CCAATTCGTGCGTTCCTAGT 58.278 50.000 0.00 0.00 0.00 2.57
192 193 1.393539 CCAATTCGTGCGTTCCTAGTG 59.606 52.381 0.00 0.00 0.00 2.74
193 194 2.333926 CAATTCGTGCGTTCCTAGTGA 58.666 47.619 0.00 0.00 0.00 3.41
194 195 2.279582 ATTCGTGCGTTCCTAGTGAG 57.720 50.000 0.00 0.00 0.00 3.51
195 196 0.388134 TTCGTGCGTTCCTAGTGAGC 60.388 55.000 0.00 0.00 0.00 4.26
196 197 1.805945 CGTGCGTTCCTAGTGAGCC 60.806 63.158 0.00 0.00 0.00 4.70
197 198 1.292223 GTGCGTTCCTAGTGAGCCA 59.708 57.895 0.00 0.00 0.00 4.75
198 199 0.737715 GTGCGTTCCTAGTGAGCCAG 60.738 60.000 0.00 0.00 0.00 4.85
199 200 1.153549 GCGTTCCTAGTGAGCCAGG 60.154 63.158 0.00 0.00 0.00 4.45
200 201 1.153549 CGTTCCTAGTGAGCCAGGC 60.154 63.158 1.84 1.84 0.00 4.85
201 202 1.222113 GTTCCTAGTGAGCCAGGCC 59.778 63.158 8.22 0.00 0.00 5.19
202 203 1.995626 TTCCTAGTGAGCCAGGCCC 60.996 63.158 8.22 0.00 0.00 5.80
203 204 2.688666 CCTAGTGAGCCAGGCCCA 60.689 66.667 8.22 0.00 0.00 5.36
204 205 2.074948 CCTAGTGAGCCAGGCCCAT 61.075 63.158 8.22 0.00 0.00 4.00
205 206 0.764369 CCTAGTGAGCCAGGCCCATA 60.764 60.000 8.22 0.00 0.00 2.74
206 207 0.683973 CTAGTGAGCCAGGCCCATAG 59.316 60.000 8.22 3.09 0.00 2.23
207 208 0.764369 TAGTGAGCCAGGCCCATAGG 60.764 60.000 8.22 0.00 0.00 2.57
208 209 2.042762 TGAGCCAGGCCCATAGGT 59.957 61.111 8.22 0.00 34.57 3.08
209 210 2.377810 TGAGCCAGGCCCATAGGTG 61.378 63.158 8.22 0.00 34.57 4.00
210 211 3.781605 GAGCCAGGCCCATAGGTGC 62.782 68.421 8.22 0.00 34.57 5.01
211 212 3.813724 GCCAGGCCCATAGGTGCT 61.814 66.667 0.00 0.00 34.57 4.40
212 213 3.010144 CCAGGCCCATAGGTGCTT 58.990 61.111 0.00 0.00 34.57 3.91
213 214 1.307647 CCAGGCCCATAGGTGCTTT 59.692 57.895 0.00 0.00 34.57 3.51
214 215 0.550914 CCAGGCCCATAGGTGCTTTA 59.449 55.000 0.00 0.00 34.57 1.85
215 216 1.064017 CCAGGCCCATAGGTGCTTTAA 60.064 52.381 0.00 0.00 34.57 1.52
216 217 2.301346 CAGGCCCATAGGTGCTTTAAG 58.699 52.381 0.00 0.00 34.57 1.85
217 218 2.092429 CAGGCCCATAGGTGCTTTAAGA 60.092 50.000 0.00 0.00 34.57 2.10
218 219 2.580783 AGGCCCATAGGTGCTTTAAGAA 59.419 45.455 0.00 0.00 34.57 2.52
219 220 2.952310 GGCCCATAGGTGCTTTAAGAAG 59.048 50.000 0.00 0.00 33.84 2.85
229 230 1.802839 CTTTAAGAAGCGTGCGATGC 58.197 50.000 0.00 0.00 0.00 3.91
230 231 1.128507 CTTTAAGAAGCGTGCGATGCA 59.871 47.619 0.00 0.00 35.60 3.96
231 232 1.152510 TTAAGAAGCGTGCGATGCAA 58.847 45.000 0.00 0.00 41.47 4.08
232 233 0.721154 TAAGAAGCGTGCGATGCAAG 59.279 50.000 0.00 0.24 41.47 4.01
237 238 3.736100 CGTGCGATGCAAGCCCAA 61.736 61.111 13.83 0.00 41.47 4.12
238 239 2.887360 GTGCGATGCAAGCCCAAT 59.113 55.556 13.83 0.00 41.47 3.16
239 240 1.713937 CGTGCGATGCAAGCCCAATA 61.714 55.000 13.83 0.00 41.47 1.90
240 241 0.029834 GTGCGATGCAAGCCCAATAG 59.970 55.000 13.83 0.00 41.47 1.73
241 242 0.394216 TGCGATGCAAGCCCAATAGT 60.394 50.000 13.83 0.00 34.76 2.12
242 243 0.029834 GCGATGCAAGCCCAATAGTG 59.970 55.000 6.28 0.00 0.00 2.74
243 244 1.382522 CGATGCAAGCCCAATAGTGT 58.617 50.000 0.00 0.00 0.00 3.55
244 245 2.560504 CGATGCAAGCCCAATAGTGTA 58.439 47.619 0.00 0.00 0.00 2.90
245 246 3.141398 CGATGCAAGCCCAATAGTGTAT 58.859 45.455 0.00 0.00 0.00 2.29
246 247 3.058708 CGATGCAAGCCCAATAGTGTATG 60.059 47.826 0.00 0.00 0.00 2.39
247 248 2.023673 TGCAAGCCCAATAGTGTATGC 58.976 47.619 0.00 0.00 0.00 3.14
248 249 1.002468 GCAAGCCCAATAGTGTATGCG 60.002 52.381 0.00 0.00 0.00 4.73
249 250 1.603802 CAAGCCCAATAGTGTATGCGG 59.396 52.381 0.00 0.00 0.00 5.69
250 251 0.108585 AGCCCAATAGTGTATGCGGG 59.891 55.000 0.00 0.00 35.69 6.13
251 252 1.515521 GCCCAATAGTGTATGCGGGC 61.516 60.000 0.78 0.78 45.18 6.13
252 253 0.108585 CCCAATAGTGTATGCGGGCT 59.891 55.000 0.00 0.00 0.00 5.19
253 254 1.346395 CCCAATAGTGTATGCGGGCTA 59.654 52.381 0.00 0.00 0.00 3.93
254 255 2.413837 CCAATAGTGTATGCGGGCTAC 58.586 52.381 0.00 0.00 0.00 3.58
255 256 2.413837 CAATAGTGTATGCGGGCTACC 58.586 52.381 0.00 0.00 0.00 3.18
256 257 1.712056 ATAGTGTATGCGGGCTACCA 58.288 50.000 0.00 0.00 36.13 3.25
257 258 1.487300 TAGTGTATGCGGGCTACCAA 58.513 50.000 0.00 0.00 36.13 3.67
258 259 0.616371 AGTGTATGCGGGCTACCAAA 59.384 50.000 0.00 0.00 36.13 3.28
259 260 0.730840 GTGTATGCGGGCTACCAAAC 59.269 55.000 0.00 0.00 36.13 2.93
260 261 0.325272 TGTATGCGGGCTACCAAACA 59.675 50.000 0.00 0.00 36.13 2.83
261 262 1.014352 GTATGCGGGCTACCAAACAG 58.986 55.000 0.00 0.00 36.13 3.16
262 263 0.107410 TATGCGGGCTACCAAACAGG 60.107 55.000 0.00 0.00 45.67 4.00
263 264 3.440415 GCGGGCTACCAAACAGGC 61.440 66.667 0.00 0.00 43.14 4.85
266 267 2.349755 GGCTACCAAACAGGCCGA 59.650 61.111 0.00 0.00 43.14 5.54
267 268 1.302993 GGCTACCAAACAGGCCGAA 60.303 57.895 0.00 0.00 43.14 4.30
268 269 0.679960 GGCTACCAAACAGGCCGAAT 60.680 55.000 0.00 0.00 43.14 3.34
269 270 0.733150 GCTACCAAACAGGCCGAATC 59.267 55.000 0.00 0.00 43.14 2.52
270 271 1.379527 CTACCAAACAGGCCGAATCC 58.620 55.000 0.00 0.00 43.14 3.01
271 272 0.988832 TACCAAACAGGCCGAATCCT 59.011 50.000 0.00 0.00 43.14 3.24
272 273 0.112412 ACCAAACAGGCCGAATCCTT 59.888 50.000 0.00 0.00 43.14 3.36
273 274 0.811281 CCAAACAGGCCGAATCCTTC 59.189 55.000 0.00 0.00 33.25 3.46
274 275 0.811281 CAAACAGGCCGAATCCTTCC 59.189 55.000 0.00 0.00 33.25 3.46
275 276 0.323451 AAACAGGCCGAATCCTTCCC 60.323 55.000 0.00 0.00 33.25 3.97
276 277 2.203070 CAGGCCGAATCCTTCCCG 60.203 66.667 0.00 0.00 33.25 5.14
277 278 4.176752 AGGCCGAATCCTTCCCGC 62.177 66.667 0.00 0.00 30.82 6.13
281 282 4.865761 CGAATCCTTCCCGCGCGA 62.866 66.667 34.63 9.90 0.00 5.87
282 283 2.962253 GAATCCTTCCCGCGCGAG 60.962 66.667 34.63 20.97 0.00 5.03
295 296 1.062525 CGCGAGCCTGGTTTTATGC 59.937 57.895 0.00 0.00 0.00 3.14
296 297 1.062525 GCGAGCCTGGTTTTATGCG 59.937 57.895 0.00 0.00 0.00 4.73
297 298 1.721487 CGAGCCTGGTTTTATGCGG 59.279 57.895 0.00 0.00 0.00 5.69
298 299 1.714899 CGAGCCTGGTTTTATGCGGG 61.715 60.000 0.00 0.00 0.00 6.13
299 300 2.004808 GAGCCTGGTTTTATGCGGGC 62.005 60.000 0.00 0.00 39.82 6.13
300 301 2.347322 GCCTGGTTTTATGCGGGCA 61.347 57.895 0.00 0.00 39.38 5.36
301 302 1.882989 GCCTGGTTTTATGCGGGCAA 61.883 55.000 0.00 0.00 39.38 4.52
302 303 0.108851 CCTGGTTTTATGCGGGCAAC 60.109 55.000 0.00 0.00 0.00 4.17
327 328 1.043673 ACGCCCTATGTGGAGGAGAC 61.044 60.000 0.00 0.00 39.15 3.36
338 339 1.145819 GAGGAGACTGAGGCATGCC 59.854 63.158 30.12 30.12 44.43 4.40
340 341 2.673200 GGAGACTGAGGCATGCCCA 61.673 63.158 33.14 26.59 36.58 5.36
342 343 2.124403 GACTGAGGCATGCCCAGG 60.124 66.667 37.11 27.93 38.13 4.45
343 344 3.711059 GACTGAGGCATGCCCAGGG 62.711 68.421 37.11 26.60 38.13 4.45
344 345 4.517934 CTGAGGCATGCCCAGGGG 62.518 72.222 31.88 18.11 36.58 4.79
360 361 2.203771 GGGCCTCTCGACCGATCAT 61.204 63.158 0.84 0.00 0.00 2.45
364 365 1.880675 GCCTCTCGACCGATCATTAGA 59.119 52.381 0.00 0.00 0.00 2.10
374 375 4.991776 ACCGATCATTAGAGAGAGATGGA 58.008 43.478 0.00 0.00 0.00 3.41
376 377 4.398988 CCGATCATTAGAGAGAGATGGAGG 59.601 50.000 0.00 0.00 0.00 4.30
378 379 5.579047 GATCATTAGAGAGAGATGGAGGGA 58.421 45.833 0.00 0.00 0.00 4.20
386 387 1.630333 AGATGGAGGGAGGGAGGGA 60.630 63.158 0.00 0.00 0.00 4.20
389 390 4.179599 GGAGGGAGGGAGGGAGGG 62.180 77.778 0.00 0.00 0.00 4.30
390 391 3.036959 GAGGGAGGGAGGGAGGGA 61.037 72.222 0.00 0.00 0.00 4.20
393 394 4.179599 GGAGGGAGGGAGGGAGGG 62.180 77.778 0.00 0.00 0.00 4.30
394 395 3.036959 GAGGGAGGGAGGGAGGGA 61.037 72.222 0.00 0.00 0.00 4.20
396 397 3.036959 GGGAGGGAGGGAGGGAGA 61.037 72.222 0.00 0.00 0.00 3.71
397 398 2.612251 GGAGGGAGGGAGGGAGAG 59.388 72.222 0.00 0.00 0.00 3.20
398 399 2.015726 GGAGGGAGGGAGGGAGAGA 61.016 68.421 0.00 0.00 0.00 3.10
399 400 1.541672 GAGGGAGGGAGGGAGAGAG 59.458 68.421 0.00 0.00 0.00 3.20
400 401 0.996762 GAGGGAGGGAGGGAGAGAGA 60.997 65.000 0.00 0.00 0.00 3.10
401 402 0.998945 AGGGAGGGAGGGAGAGAGAG 60.999 65.000 0.00 0.00 0.00 3.20
402 403 0.996762 GGGAGGGAGGGAGAGAGAGA 60.997 65.000 0.00 0.00 0.00 3.10
403 404 0.478507 GGAGGGAGGGAGAGAGAGAG 59.521 65.000 0.00 0.00 0.00 3.20
404 405 1.518367 GAGGGAGGGAGAGAGAGAGA 58.482 60.000 0.00 0.00 0.00 3.10
405 406 1.421646 GAGGGAGGGAGAGAGAGAGAG 59.578 61.905 0.00 0.00 0.00 3.20
406 407 1.010793 AGGGAGGGAGAGAGAGAGAGA 59.989 57.143 0.00 0.00 0.00 3.10
407 408 1.421646 GGGAGGGAGAGAGAGAGAGAG 59.578 61.905 0.00 0.00 0.00 3.20
408 409 2.127708 GGAGGGAGAGAGAGAGAGAGT 58.872 57.143 0.00 0.00 0.00 3.24
409 410 2.509964 GGAGGGAGAGAGAGAGAGAGTT 59.490 54.545 0.00 0.00 0.00 3.01
410 411 3.545703 GAGGGAGAGAGAGAGAGAGTTG 58.454 54.545 0.00 0.00 0.00 3.16
411 412 2.242196 AGGGAGAGAGAGAGAGAGTTGG 59.758 54.545 0.00 0.00 0.00 3.77
412 413 2.654863 GGAGAGAGAGAGAGAGTTGGG 58.345 57.143 0.00 0.00 0.00 4.12
413 414 2.025321 GGAGAGAGAGAGAGAGTTGGGT 60.025 54.545 0.00 0.00 0.00 4.51
414 415 3.563479 GGAGAGAGAGAGAGAGTTGGGTT 60.563 52.174 0.00 0.00 0.00 4.11
415 416 4.086457 GAGAGAGAGAGAGAGTTGGGTTT 58.914 47.826 0.00 0.00 0.00 3.27
416 417 4.488770 AGAGAGAGAGAGAGTTGGGTTTT 58.511 43.478 0.00 0.00 0.00 2.43
417 418 4.526650 AGAGAGAGAGAGAGTTGGGTTTTC 59.473 45.833 0.00 0.00 0.00 2.29
418 419 4.488770 AGAGAGAGAGAGTTGGGTTTTCT 58.511 43.478 0.00 0.00 0.00 2.52
419 420 4.526650 AGAGAGAGAGAGTTGGGTTTTCTC 59.473 45.833 0.00 0.00 38.06 2.87
420 421 4.227197 AGAGAGAGAGTTGGGTTTTCTCA 58.773 43.478 3.85 0.00 39.79 3.27
421 422 4.039852 AGAGAGAGAGTTGGGTTTTCTCAC 59.960 45.833 3.85 0.00 39.79 3.51
422 423 3.071747 AGAGAGAGTTGGGTTTTCTCACC 59.928 47.826 3.85 0.00 39.79 4.02
428 429 0.107831 TGGGTTTTCTCACCGACCTG 59.892 55.000 0.00 0.00 37.76 4.00
430 431 1.509703 GGTTTTCTCACCGACCTGTC 58.490 55.000 0.00 0.00 0.00 3.51
449 450 2.093447 GTCGAGATGTGGATTGTTCCCT 60.093 50.000 0.00 0.00 41.83 4.20
464 465 1.890041 CCCTCGCGGAAACAACACA 60.890 57.895 6.13 0.00 0.00 3.72
501 510 2.350192 CACTATGCGACCAAATGCGTTA 59.650 45.455 0.00 0.00 0.00 3.18
531 545 1.688197 CCTGGGTGCATTTGACACTTT 59.312 47.619 0.00 0.00 38.14 2.66
532 546 2.546373 CCTGGGTGCATTTGACACTTTG 60.546 50.000 0.00 0.00 38.14 2.77
557 571 4.476752 TGGGTTCGGCGTATGGGC 62.477 66.667 6.85 0.00 37.98 5.36
564 591 2.267642 GGCGTATGGGCTGTGACA 59.732 61.111 0.00 0.00 38.40 3.58
570 597 0.042581 TATGGGCTGTGACAGGGAGA 59.957 55.000 15.24 0.00 31.21 3.71
571 598 0.622738 ATGGGCTGTGACAGGGAGAT 60.623 55.000 15.24 0.00 31.21 2.75
572 599 1.267574 TGGGCTGTGACAGGGAGATC 61.268 60.000 15.24 0.00 31.21 2.75
573 600 1.267574 GGGCTGTGACAGGGAGATCA 61.268 60.000 15.24 0.00 31.21 2.92
574 601 0.615331 GGCTGTGACAGGGAGATCAA 59.385 55.000 15.24 0.00 31.21 2.57
575 602 1.406614 GGCTGTGACAGGGAGATCAAG 60.407 57.143 15.24 0.00 31.21 3.02
576 603 1.552337 GCTGTGACAGGGAGATCAAGA 59.448 52.381 15.24 0.00 31.21 3.02
577 604 2.418471 GCTGTGACAGGGAGATCAAGAG 60.418 54.545 15.24 0.00 31.21 2.85
578 605 2.168106 CTGTGACAGGGAGATCAAGAGG 59.832 54.545 4.28 0.00 0.00 3.69
579 606 1.484240 GTGACAGGGAGATCAAGAGGG 59.516 57.143 0.00 0.00 0.00 4.30
580 607 1.127343 GACAGGGAGATCAAGAGGGG 58.873 60.000 0.00 0.00 0.00 4.79
581 608 0.327000 ACAGGGAGATCAAGAGGGGG 60.327 60.000 0.00 0.00 0.00 5.40
618 659 1.675720 CCAAGCGGGCCTTAATTGGG 61.676 60.000 16.87 2.80 37.37 4.12
628 669 3.090790 GCCTTAATTGGGTTCGGGTTTA 58.909 45.455 0.00 0.00 0.00 2.01
647 688 6.140786 GGTTTACAAATCCGTCTCAACTTTC 58.859 40.000 0.00 0.00 0.00 2.62
664 706 3.784202 ACTTTCCCCGTATCTTATTGGGT 59.216 43.478 0.00 0.00 40.20 4.51
733 777 8.782339 ATTCAAAAAGCAAATCCATCTTTAGG 57.218 30.769 0.00 0.00 30.66 2.69
761 806 8.729756 TGCAATTACTGGATCATATTAATTCGG 58.270 33.333 0.00 0.00 0.00 4.30
791 836 2.248280 ATGCAACCCGCGATTACATA 57.752 45.000 8.23 0.00 46.97 2.29
801 847 2.729882 CGCGATTACATAGCTTGGGTAC 59.270 50.000 0.00 0.00 0.00 3.34
808 854 2.009774 CATAGCTTGGGTACTGCACAC 58.990 52.381 0.00 0.00 0.00 3.82
818 864 1.798813 GTACTGCACACTTTAGCGCTT 59.201 47.619 18.68 0.00 0.00 4.68
855 901 1.371558 GCAGTTCAGAAGGGTCCGT 59.628 57.895 0.00 0.00 0.00 4.69
878 924 1.664333 CAAATTGCCACCGGTGTGC 60.664 57.895 31.80 30.75 41.35 4.57
975 1021 4.143333 CCGTCCGCCGTCAATCCT 62.143 66.667 0.00 0.00 33.66 3.24
1065 1111 3.941188 CGCCGCATACCCCTCCAT 61.941 66.667 0.00 0.00 0.00 3.41
1085 1131 1.756950 ATCACCGCCGCTTCCTCTA 60.757 57.895 0.00 0.00 0.00 2.43
1440 1489 1.376942 CTGCAAGAGCCAGTCCCTG 60.377 63.158 0.00 0.00 41.13 4.45
1512 1561 5.461032 TGGTAAATTTCGGCAAGTTTGAT 57.539 34.783 0.00 0.00 0.00 2.57
1664 1721 1.314534 TGGGAGGTGATGCATTTGCG 61.315 55.000 0.00 0.00 45.83 4.85
1809 1866 2.173519 CATGCACCAGGGTTCTTTGAT 58.826 47.619 0.00 0.00 0.00 2.57
1851 1908 1.168407 GCTTTCTGCACAGTGAGCCA 61.168 55.000 10.18 0.00 42.31 4.75
2042 2135 7.624549 AGCTATGACTTTTAATCCTCTGAACA 58.375 34.615 0.00 0.00 0.00 3.18
2078 2171 4.082625 TGCCATATCAGACAAAACAAGCAG 60.083 41.667 0.00 0.00 0.00 4.24
2082 2175 6.094464 CCATATCAGACAAAACAAGCAGATGA 59.906 38.462 0.00 0.00 0.00 2.92
2280 2376 2.656947 TGGCTATATTTCTGGCACCC 57.343 50.000 0.00 0.00 0.00 4.61
2296 2392 2.650322 CACCCTTGTGTTAACTGGTGT 58.350 47.619 7.22 2.65 36.87 4.16
2569 2681 0.550147 ACTGGAAGGTATGGTGGCCT 60.550 55.000 3.32 0.00 39.30 5.19
2632 2745 6.369059 GCTGATGCTGTGTATATCACTTTT 57.631 37.500 6.79 0.00 46.27 2.27
2890 3005 5.761818 AGTTTGCAAAGTTTGACTTTTCG 57.238 34.783 19.82 0.00 45.38 3.46
3261 3377 9.213799 TGTTACTTTTTGAGCAATCTTTTTGTT 57.786 25.926 0.00 0.00 0.00 2.83
3284 3400 3.621268 TGATGGACGCTTTAAAGATTCCG 59.379 43.478 19.48 14.23 33.44 4.30
3435 3551 8.004087 ACATAATTGAATCTTTCCTGACATGG 57.996 34.615 0.00 0.00 0.00 3.66
3450 3566 8.141298 TCCTGACATGGTGTTTAATCTACTTA 57.859 34.615 0.00 0.00 0.00 2.24
3579 3695 7.012704 GTGAATACATCTGTTGGCAATACATCT 59.987 37.037 1.92 0.00 0.00 2.90
3847 4216 4.013267 AGCATATATGAGGAGGTTGCAC 57.987 45.455 17.10 0.00 0.00 4.57
3861 4230 2.813754 GGTTGCACATTTACTCAGCTGA 59.186 45.455 17.19 17.19 0.00 4.26
4145 4515 3.618997 CGTCCTTGTGGTGGTAGCTATTT 60.619 47.826 0.00 0.00 34.23 1.40
4672 5042 6.285990 TCCAGTCTGTTTTGTTAAGACCTAC 58.714 40.000 0.00 0.00 41.02 3.18
4907 5277 2.234414 TGCTTCTCCAATGAATTTGCCC 59.766 45.455 0.00 0.00 33.73 5.36
4929 5299 1.223211 GGAGGAGAAAGGCCTGAGC 59.777 63.158 5.69 0.00 35.44 4.26
5030 5400 2.555757 AGCTGTGCTGATTTTCAGTTCC 59.444 45.455 6.40 0.00 45.94 3.62
5075 5445 5.779771 AGGTTTTCATTTGCTTCCTTATCCA 59.220 36.000 0.00 0.00 0.00 3.41
5118 5488 8.540507 TCTGCTCTTATAAGTTCTAACCATCT 57.459 34.615 12.19 0.00 0.00 2.90
5120 5490 9.255304 CTGCTCTTATAAGTTCTAACCATCTTC 57.745 37.037 12.19 0.00 0.00 2.87
5128 5498 5.735766 AGTTCTAACCATCTTCCTACTTGC 58.264 41.667 0.00 0.00 0.00 4.01
5235 5609 8.612619 ACATTTCAATATCGTTTCATCTGGTAC 58.387 33.333 0.00 0.00 0.00 3.34
5245 5619 1.275010 TCATCTGGTACGTGTGCATGT 59.725 47.619 0.00 2.46 0.00 3.21
5246 5620 1.394572 CATCTGGTACGTGTGCATGTG 59.605 52.381 0.00 0.00 0.00 3.21
5264 5638 5.278463 GCATGTGTAACTGAGGAACATGTTT 60.278 40.000 13.36 0.00 46.25 2.83
5266 5640 6.371809 TGTGTAACTGAGGAACATGTTTTC 57.628 37.500 13.36 13.74 38.04 2.29
5271 5645 7.556275 TGTAACTGAGGAACATGTTTTCTTTCT 59.444 33.333 13.36 4.19 0.00 2.52
5294 5668 5.710409 ATGGATGATCAGGCATATCATGA 57.290 39.130 16.41 0.00 42.68 3.07
5323 5697 4.686091 GGTTTACTGAAGCCATTTTGAAGC 59.314 41.667 0.00 0.00 36.02 3.86
5333 5707 3.507622 GCCATTTTGAAGCTAACCAGACT 59.492 43.478 0.00 0.00 0.00 3.24
5365 5739 4.320667 TGAATGTATTGTTCAGTTCGCG 57.679 40.909 0.00 0.00 32.23 5.87
5376 5750 1.472878 TCAGTTCGCGTATCTCAAGCT 59.527 47.619 5.77 0.00 0.00 3.74
5432 5806 1.613520 GGGTTGAAGCCCTGGAACTAC 60.614 57.143 1.04 0.00 45.22 2.73
5436 5810 2.054799 TGAAGCCCTGGAACTACAAGT 58.945 47.619 0.00 0.00 0.00 3.16
5475 5849 5.364778 TCTGGAAAAATCTTCGACAGTTGA 58.635 37.500 0.00 0.00 0.00 3.18
5476 5850 5.820423 TCTGGAAAAATCTTCGACAGTTGAA 59.180 36.000 3.06 3.06 0.00 2.69
5478 5852 5.588648 TGGAAAAATCTTCGACAGTTGAAGT 59.411 36.000 24.45 12.89 42.68 3.01
5479 5853 6.094881 TGGAAAAATCTTCGACAGTTGAAGTT 59.905 34.615 24.45 16.51 42.68 2.66
5480 5854 6.633234 GGAAAAATCTTCGACAGTTGAAGTTC 59.367 38.462 24.45 20.12 42.68 3.01
5485 5859 8.433421 AATCTTCGACAGTTGAAGTTCTTTTA 57.567 30.769 24.45 8.80 42.68 1.52
5486 5860 7.837202 TCTTCGACAGTTGAAGTTCTTTTAA 57.163 32.000 24.45 5.56 42.68 1.52
5488 5862 8.889717 TCTTCGACAGTTGAAGTTCTTTTAATT 58.110 29.630 24.45 0.00 42.68 1.40
5489 5863 8.835467 TTCGACAGTTGAAGTTCTTTTAATTG 57.165 30.769 4.17 0.11 31.16 2.32
5514 5892 1.210478 AGGCAGGCGATACATTCTGTT 59.790 47.619 0.00 0.00 0.00 3.16
5521 5899 4.870426 AGGCGATACATTCTGTTAACAGTG 59.130 41.667 29.83 24.30 44.12 3.66
5531 5910 8.956426 ACATTCTGTTAACAGTGAGAAAAGAAA 58.044 29.630 29.83 15.94 44.12 2.52
5532 5911 9.787532 CATTCTGTTAACAGTGAGAAAAGAAAA 57.212 29.630 29.83 15.50 44.12 2.29
5538 5917 6.396829 AACAGTGAGAAAAGAAAAGGATGG 57.603 37.500 0.00 0.00 0.00 3.51
5573 5952 2.724977 TCACGATGGTGTCTCAGAAC 57.275 50.000 7.79 0.00 44.68 3.01
5620 5999 0.324285 CTCCTCCCATAGCTGATGCC 59.676 60.000 0.00 0.00 40.80 4.40
5675 6055 0.519961 GTTCGTGGTTGGCATGTACC 59.480 55.000 0.00 0.00 34.93 3.34
5681 6061 1.279558 TGGTTGGCATGTACCGTGTAT 59.720 47.619 2.59 0.00 37.23 2.29
5682 6062 1.668751 GGTTGGCATGTACCGTGTATG 59.331 52.381 0.00 0.00 0.00 2.39
5732 6113 5.182001 CCGTCATTGAGAACTTTCAAGGAAT 59.818 40.000 4.89 0.00 45.80 3.01
5733 6114 6.082338 CGTCATTGAGAACTTTCAAGGAATG 58.918 40.000 4.89 0.00 45.80 2.67
5735 6116 7.095229 CGTCATTGAGAACTTTCAAGGAATGTA 60.095 37.037 4.89 0.00 45.80 2.29
5769 6150 4.192429 AGTTAGAAATGCAAATGGTGGC 57.808 40.909 0.00 0.00 0.00 5.01
5803 6193 0.248621 GCCTTTTCGAATCATGGGCG 60.249 55.000 0.00 0.00 0.00 6.13
5818 6208 0.542805 GGGCGGTACCTGTATTTCCA 59.457 55.000 10.90 0.00 39.10 3.53
5821 6211 2.093341 GGCGGTACCTGTATTTCCAAGA 60.093 50.000 10.90 0.00 34.51 3.02
5822 6212 3.195661 GCGGTACCTGTATTTCCAAGAG 58.804 50.000 10.90 0.00 0.00 2.85
5823 6213 3.118884 GCGGTACCTGTATTTCCAAGAGA 60.119 47.826 10.90 0.00 0.00 3.10
5824 6214 4.683832 CGGTACCTGTATTTCCAAGAGAG 58.316 47.826 10.90 0.00 0.00 3.20
5825 6215 4.401519 CGGTACCTGTATTTCCAAGAGAGA 59.598 45.833 10.90 0.00 0.00 3.10
5826 6216 5.105473 CGGTACCTGTATTTCCAAGAGAGAA 60.105 44.000 10.90 0.00 0.00 2.87
5827 6217 6.573680 CGGTACCTGTATTTCCAAGAGAGAAA 60.574 42.308 10.90 0.00 37.61 2.52
5828 6218 7.166167 GGTACCTGTATTTCCAAGAGAGAAAA 58.834 38.462 4.06 0.00 36.83 2.29
5829 6219 7.829706 GGTACCTGTATTTCCAAGAGAGAAAAT 59.170 37.037 4.06 0.00 36.83 1.82
5830 6220 9.886132 GTACCTGTATTTCCAAGAGAGAAAATA 57.114 33.333 0.00 0.00 36.83 1.40
5832 6222 9.454859 ACCTGTATTTCCAAGAGAGAAAATAAG 57.545 33.333 0.00 0.00 36.83 1.73
5833 6223 9.672673 CCTGTATTTCCAAGAGAGAAAATAAGA 57.327 33.333 0.00 0.00 36.83 2.10
5876 6308 1.920574 CTGAAGCGTCTTGACATACGG 59.079 52.381 11.45 0.00 39.46 4.02
5887 6319 0.802494 GACATACGGGGTGCACAAAG 59.198 55.000 20.43 11.00 0.00 2.77
5895 6327 2.514803 GGGGTGCACAAAGTAGACAAT 58.485 47.619 20.43 0.00 0.00 2.71
5930 6362 4.875544 TTTTTCTGAGACAAGACAACGG 57.124 40.909 0.00 0.00 0.00 4.44
5931 6363 3.812156 TTTCTGAGACAAGACAACGGA 57.188 42.857 0.00 0.00 0.00 4.69
5932 6364 3.812156 TTCTGAGACAAGACAACGGAA 57.188 42.857 0.00 0.00 0.00 4.30
5933 6365 4.336889 TTCTGAGACAAGACAACGGAAT 57.663 40.909 0.00 0.00 0.00 3.01
5934 6366 4.336889 TCTGAGACAAGACAACGGAATT 57.663 40.909 0.00 0.00 0.00 2.17
5935 6367 4.058124 TCTGAGACAAGACAACGGAATTG 58.942 43.478 0.00 0.00 44.60 2.32
5936 6368 2.548057 TGAGACAAGACAACGGAATTGC 59.452 45.455 0.00 0.00 42.62 3.56
5937 6369 2.808543 GAGACAAGACAACGGAATTGCT 59.191 45.455 0.00 0.00 42.62 3.91
5938 6370 3.994392 GAGACAAGACAACGGAATTGCTA 59.006 43.478 0.00 0.00 42.62 3.49
5939 6371 4.385825 AGACAAGACAACGGAATTGCTAA 58.614 39.130 0.00 0.00 42.62 3.09
5940 6372 5.003804 AGACAAGACAACGGAATTGCTAAT 58.996 37.500 0.00 0.00 42.62 1.73
5941 6373 5.473504 AGACAAGACAACGGAATTGCTAATT 59.526 36.000 0.00 0.00 42.62 1.40
5942 6374 5.699839 ACAAGACAACGGAATTGCTAATTC 58.300 37.500 11.08 11.08 45.12 2.17
5943 6375 5.473504 ACAAGACAACGGAATTGCTAATTCT 59.526 36.000 16.14 2.62 45.17 2.40
5986 6418 0.452184 TCTCAGGCGACGTGAGATTC 59.548 55.000 20.57 0.00 44.43 2.52
5987 6419 0.863538 CTCAGGCGACGTGAGATTCG 60.864 60.000 18.47 0.00 43.65 3.34
5988 6420 1.154016 CAGGCGACGTGAGATTCGT 60.154 57.895 0.00 0.00 44.27 3.85
5989 6421 0.732880 CAGGCGACGTGAGATTCGTT 60.733 55.000 0.00 0.00 41.64 3.85
5990 6422 0.456312 AGGCGACGTGAGATTCGTTC 60.456 55.000 0.00 0.00 41.64 3.95
5991 6423 1.619207 GCGACGTGAGATTCGTTCG 59.381 57.895 0.00 0.00 41.64 3.95
5992 6424 0.791983 GCGACGTGAGATTCGTTCGA 60.792 55.000 0.00 0.00 41.64 3.71
5993 6425 1.811428 CGACGTGAGATTCGTTCGAT 58.189 50.000 0.00 0.00 41.64 3.59
5994 6426 2.174764 CGACGTGAGATTCGTTCGATT 58.825 47.619 0.00 0.00 41.64 3.34
5995 6427 2.036496 CGACGTGAGATTCGTTCGATTG 60.036 50.000 0.00 0.00 41.64 2.67
5996 6428 2.915463 GACGTGAGATTCGTTCGATTGT 59.085 45.455 0.00 0.00 41.64 2.71
5997 6429 4.087510 ACGTGAGATTCGTTCGATTGTA 57.912 40.909 0.00 0.00 38.38 2.41
5998 6430 4.669318 ACGTGAGATTCGTTCGATTGTAT 58.331 39.130 0.00 0.00 38.38 2.29
5999 6431 4.499399 ACGTGAGATTCGTTCGATTGTATG 59.501 41.667 0.00 0.00 38.38 2.39
6000 6432 4.604043 CGTGAGATTCGTTCGATTGTATGC 60.604 45.833 0.00 0.00 0.00 3.14
6001 6433 4.267690 GTGAGATTCGTTCGATTGTATGCA 59.732 41.667 0.00 0.00 0.00 3.96
6002 6434 4.504097 TGAGATTCGTTCGATTGTATGCAG 59.496 41.667 0.00 0.00 0.00 4.41
6003 6435 4.682787 AGATTCGTTCGATTGTATGCAGA 58.317 39.130 0.00 0.00 0.00 4.26
6004 6436 5.292765 AGATTCGTTCGATTGTATGCAGAT 58.707 37.500 0.00 0.00 0.00 2.90
6005 6437 5.755375 AGATTCGTTCGATTGTATGCAGATT 59.245 36.000 0.00 0.00 0.00 2.40
6006 6438 6.923508 AGATTCGTTCGATTGTATGCAGATTA 59.076 34.615 0.00 0.00 0.00 1.75
6007 6439 6.510746 TTCGTTCGATTGTATGCAGATTAG 57.489 37.500 0.00 0.00 0.00 1.73
6008 6440 5.588240 TCGTTCGATTGTATGCAGATTAGT 58.412 37.500 0.00 0.00 0.00 2.24
6009 6441 6.040247 TCGTTCGATTGTATGCAGATTAGTT 58.960 36.000 0.00 0.00 0.00 2.24
6010 6442 6.533723 TCGTTCGATTGTATGCAGATTAGTTT 59.466 34.615 0.00 0.00 0.00 2.66
6011 6443 6.624917 CGTTCGATTGTATGCAGATTAGTTTG 59.375 38.462 0.00 0.00 0.00 2.93
6012 6444 7.464358 GTTCGATTGTATGCAGATTAGTTTGT 58.536 34.615 0.00 0.00 0.00 2.83
6013 6445 7.003939 TCGATTGTATGCAGATTAGTTTGTG 57.996 36.000 0.00 0.00 0.00 3.33
6014 6446 6.037062 TCGATTGTATGCAGATTAGTTTGTGG 59.963 38.462 0.00 0.00 0.00 4.17
6015 6447 5.895636 TTGTATGCAGATTAGTTTGTGGG 57.104 39.130 0.00 0.00 0.00 4.61
6016 6448 3.694072 TGTATGCAGATTAGTTTGTGGGC 59.306 43.478 0.00 0.00 0.00 5.36
6017 6449 2.584835 TGCAGATTAGTTTGTGGGCT 57.415 45.000 0.00 0.00 0.00 5.19
6018 6450 2.875296 TGCAGATTAGTTTGTGGGCTT 58.125 42.857 0.00 0.00 0.00 4.35
6019 6451 2.557924 TGCAGATTAGTTTGTGGGCTTG 59.442 45.455 0.00 0.00 0.00 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 3.827898 CTCCCGACTCTCACCGGC 61.828 72.222 0.00 0.00 44.07 6.13
4 5 2.045242 TCTCCCGACTCTCACCGG 60.045 66.667 0.00 0.00 44.94 5.28
5 6 1.377463 ACTCTCCCGACTCTCACCG 60.377 63.158 0.00 0.00 0.00 4.94
6 7 1.316706 CCACTCTCCCGACTCTCACC 61.317 65.000 0.00 0.00 0.00 4.02
7 8 1.316706 CCCACTCTCCCGACTCTCAC 61.317 65.000 0.00 0.00 0.00 3.51
8 9 1.000771 CCCACTCTCCCGACTCTCA 60.001 63.158 0.00 0.00 0.00 3.27
9 10 1.755008 CCCCACTCTCCCGACTCTC 60.755 68.421 0.00 0.00 0.00 3.20
10 11 1.801302 TTCCCCACTCTCCCGACTCT 61.801 60.000 0.00 0.00 0.00 3.24
11 12 1.305046 TTCCCCACTCTCCCGACTC 60.305 63.158 0.00 0.00 0.00 3.36
12 13 1.305381 CTTCCCCACTCTCCCGACT 60.305 63.158 0.00 0.00 0.00 4.18
13 14 1.305046 TCTTCCCCACTCTCCCGAC 60.305 63.158 0.00 0.00 0.00 4.79
14 15 1.000486 CTCTTCCCCACTCTCCCGA 60.000 63.158 0.00 0.00 0.00 5.14
15 16 1.305381 ACTCTTCCCCACTCTCCCG 60.305 63.158 0.00 0.00 0.00 5.14
16 17 1.268283 CCACTCTTCCCCACTCTCCC 61.268 65.000 0.00 0.00 0.00 4.30
17 18 1.268283 CCCACTCTTCCCCACTCTCC 61.268 65.000 0.00 0.00 0.00 3.71
18 19 1.268283 CCCCACTCTTCCCCACTCTC 61.268 65.000 0.00 0.00 0.00 3.20
19 20 1.229658 CCCCACTCTTCCCCACTCT 60.230 63.158 0.00 0.00 0.00 3.24
20 21 0.840722 TTCCCCACTCTTCCCCACTC 60.841 60.000 0.00 0.00 0.00 3.51
21 22 0.842467 CTTCCCCACTCTTCCCCACT 60.842 60.000 0.00 0.00 0.00 4.00
22 23 1.685820 CTTCCCCACTCTTCCCCAC 59.314 63.158 0.00 0.00 0.00 4.61
23 24 1.541368 CCTTCCCCACTCTTCCCCA 60.541 63.158 0.00 0.00 0.00 4.96
24 25 2.309504 CCCTTCCCCACTCTTCCCC 61.310 68.421 0.00 0.00 0.00 4.81
25 26 1.229853 TCCCTTCCCCACTCTTCCC 60.230 63.158 0.00 0.00 0.00 3.97
26 27 1.916206 GCTCCCTTCCCCACTCTTCC 61.916 65.000 0.00 0.00 0.00 3.46
27 28 1.604915 GCTCCCTTCCCCACTCTTC 59.395 63.158 0.00 0.00 0.00 2.87
28 29 2.294078 CGCTCCCTTCCCCACTCTT 61.294 63.158 0.00 0.00 0.00 2.85
29 30 2.685380 CGCTCCCTTCCCCACTCT 60.685 66.667 0.00 0.00 0.00 3.24
30 31 3.787001 CCGCTCCCTTCCCCACTC 61.787 72.222 0.00 0.00 0.00 3.51
31 32 4.658786 ACCGCTCCCTTCCCCACT 62.659 66.667 0.00 0.00 0.00 4.00
32 33 4.410400 CACCGCTCCCTTCCCCAC 62.410 72.222 0.00 0.00 0.00 4.61
33 34 4.649705 TCACCGCTCCCTTCCCCA 62.650 66.667 0.00 0.00 0.00 4.96
34 35 3.787001 CTCACCGCTCCCTTCCCC 61.787 72.222 0.00 0.00 0.00 4.81
35 36 3.787001 CCTCACCGCTCCCTTCCC 61.787 72.222 0.00 0.00 0.00 3.97
36 37 3.787001 CCCTCACCGCTCCCTTCC 61.787 72.222 0.00 0.00 0.00 3.46
37 38 3.787001 CCCCTCACCGCTCCCTTC 61.787 72.222 0.00 0.00 0.00 3.46
48 49 3.787803 TATTAGCCTCACCGCCCCTCA 62.788 57.143 0.00 0.00 0.00 3.86
49 50 1.119574 TATTAGCCTCACCGCCCCTC 61.120 60.000 0.00 0.00 0.00 4.30
50 51 0.693092 TTATTAGCCTCACCGCCCCT 60.693 55.000 0.00 0.00 0.00 4.79
51 52 0.534427 GTTATTAGCCTCACCGCCCC 60.534 60.000 0.00 0.00 0.00 5.80
52 53 0.468648 AGTTATTAGCCTCACCGCCC 59.531 55.000 0.00 0.00 0.00 6.13
53 54 2.210961 GAAGTTATTAGCCTCACCGCC 58.789 52.381 0.00 0.00 0.00 6.13
54 55 2.210961 GGAAGTTATTAGCCTCACCGC 58.789 52.381 0.00 0.00 0.00 5.68
55 56 2.470821 CGGAAGTTATTAGCCTCACCG 58.529 52.381 0.00 0.00 0.00 4.94
56 57 2.169978 ACCGGAAGTTATTAGCCTCACC 59.830 50.000 9.46 0.00 0.00 4.02
57 58 3.195661 CACCGGAAGTTATTAGCCTCAC 58.804 50.000 9.46 0.00 0.00 3.51
58 59 2.419574 GCACCGGAAGTTATTAGCCTCA 60.420 50.000 9.46 0.00 0.00 3.86
59 60 2.158943 AGCACCGGAAGTTATTAGCCTC 60.159 50.000 9.46 0.00 0.00 4.70
60 61 1.838077 AGCACCGGAAGTTATTAGCCT 59.162 47.619 9.46 0.00 0.00 4.58
61 62 2.327200 AGCACCGGAAGTTATTAGCC 57.673 50.000 9.46 0.00 0.00 3.93
62 63 2.284417 CGAAGCACCGGAAGTTATTAGC 59.716 50.000 9.46 0.00 0.00 3.09
79 80 3.788766 CCGCGTTGCTTCCCGAAG 61.789 66.667 4.92 0.00 41.24 3.79
87 88 4.357947 TCGAGAAGCCGCGTTGCT 62.358 61.111 4.92 4.34 45.43 3.91
88 89 3.843240 CTCGAGAAGCCGCGTTGC 61.843 66.667 6.58 1.35 36.92 4.17
89 90 3.843240 GCTCGAGAAGCCGCGTTG 61.843 66.667 18.75 0.00 45.92 4.10
152 153 1.075659 AGTTTCTCCAAGGCCAGGC 59.924 57.895 5.01 1.26 0.00 4.85
153 154 1.246737 GCAGTTTCTCCAAGGCCAGG 61.247 60.000 5.01 6.73 0.00 4.45
154 155 1.246737 GGCAGTTTCTCCAAGGCCAG 61.247 60.000 5.01 0.00 41.02 4.85
155 156 1.228552 GGCAGTTTCTCCAAGGCCA 60.229 57.895 5.01 0.00 41.02 5.36
156 157 0.827507 TTGGCAGTTTCTCCAAGGCC 60.828 55.000 0.00 0.00 37.43 5.19
157 158 1.260544 ATTGGCAGTTTCTCCAAGGC 58.739 50.000 0.00 0.00 44.59 4.35
158 159 2.095059 CGAATTGGCAGTTTCTCCAAGG 60.095 50.000 0.00 0.00 44.59 3.61
159 160 2.554032 ACGAATTGGCAGTTTCTCCAAG 59.446 45.455 0.00 0.00 44.59 3.61
160 161 2.293122 CACGAATTGGCAGTTTCTCCAA 59.707 45.455 0.00 0.00 45.35 3.53
161 162 1.879380 CACGAATTGGCAGTTTCTCCA 59.121 47.619 0.00 0.00 0.00 3.86
162 163 1.401539 GCACGAATTGGCAGTTTCTCC 60.402 52.381 0.00 0.00 0.00 3.71
163 164 1.725931 CGCACGAATTGGCAGTTTCTC 60.726 52.381 0.00 0.00 0.00 2.87
164 165 0.238289 CGCACGAATTGGCAGTTTCT 59.762 50.000 0.00 0.00 0.00 2.52
165 166 0.040425 ACGCACGAATTGGCAGTTTC 60.040 50.000 0.00 0.00 0.00 2.78
166 167 0.383949 AACGCACGAATTGGCAGTTT 59.616 45.000 0.00 0.00 0.00 2.66
167 168 0.040425 GAACGCACGAATTGGCAGTT 60.040 50.000 0.00 0.00 32.47 3.16
168 169 1.574428 GAACGCACGAATTGGCAGT 59.426 52.632 0.00 0.00 0.00 4.40
169 170 1.154225 GGAACGCACGAATTGGCAG 60.154 57.895 0.00 0.00 0.00 4.85
170 171 0.320858 TAGGAACGCACGAATTGGCA 60.321 50.000 0.00 0.00 0.00 4.92
171 172 0.373716 CTAGGAACGCACGAATTGGC 59.626 55.000 0.00 0.00 0.00 4.52
172 173 1.393539 CACTAGGAACGCACGAATTGG 59.606 52.381 0.00 0.00 0.00 3.16
173 174 2.333926 TCACTAGGAACGCACGAATTG 58.666 47.619 0.00 0.00 0.00 2.32
174 175 2.607187 CTCACTAGGAACGCACGAATT 58.393 47.619 0.00 0.00 0.00 2.17
175 176 1.736032 GCTCACTAGGAACGCACGAAT 60.736 52.381 0.00 0.00 0.00 3.34
176 177 0.388134 GCTCACTAGGAACGCACGAA 60.388 55.000 0.00 0.00 0.00 3.85
177 178 1.211969 GCTCACTAGGAACGCACGA 59.788 57.895 0.00 0.00 0.00 4.35
178 179 1.805945 GGCTCACTAGGAACGCACG 60.806 63.158 0.00 0.00 0.00 5.34
179 180 0.737715 CTGGCTCACTAGGAACGCAC 60.738 60.000 0.00 0.00 0.00 5.34
180 181 1.591703 CTGGCTCACTAGGAACGCA 59.408 57.895 0.00 0.00 0.00 5.24
181 182 1.153549 CCTGGCTCACTAGGAACGC 60.154 63.158 0.00 0.00 36.11 4.84
182 183 1.153549 GCCTGGCTCACTAGGAACG 60.154 63.158 12.43 0.00 36.11 3.95
183 184 1.222113 GGCCTGGCTCACTAGGAAC 59.778 63.158 19.68 0.00 36.11 3.62
184 185 1.995626 GGGCCTGGCTCACTAGGAA 60.996 63.158 19.68 0.00 36.11 3.36
185 186 2.365635 GGGCCTGGCTCACTAGGA 60.366 66.667 19.68 0.00 36.11 2.94
186 187 0.764369 TATGGGCCTGGCTCACTAGG 60.764 60.000 26.18 0.00 43.92 3.02
187 188 0.683973 CTATGGGCCTGGCTCACTAG 59.316 60.000 26.18 20.70 43.92 2.57
188 189 0.764369 CCTATGGGCCTGGCTCACTA 60.764 60.000 26.18 15.74 43.92 2.74
189 190 2.074948 CCTATGGGCCTGGCTCACT 61.075 63.158 26.18 15.44 43.92 3.41
190 191 2.378634 ACCTATGGGCCTGGCTCAC 61.379 63.158 26.18 12.36 43.92 3.51
191 192 2.042762 ACCTATGGGCCTGGCTCA 59.957 61.111 25.82 25.82 45.75 4.26
192 193 2.512896 CACCTATGGGCCTGGCTC 59.487 66.667 19.68 16.49 35.63 4.70
193 194 3.813724 GCACCTATGGGCCTGGCT 61.814 66.667 19.68 0.70 35.63 4.75
194 195 2.861271 AAAGCACCTATGGGCCTGGC 62.861 60.000 11.05 11.05 35.63 4.85
195 196 0.550914 TAAAGCACCTATGGGCCTGG 59.449 55.000 4.53 7.19 35.63 4.45
196 197 2.092429 TCTTAAAGCACCTATGGGCCTG 60.092 50.000 4.53 0.00 35.63 4.85
197 198 2.205342 TCTTAAAGCACCTATGGGCCT 58.795 47.619 4.53 0.00 35.63 5.19
198 199 2.729028 TCTTAAAGCACCTATGGGCC 57.271 50.000 0.00 0.00 35.63 5.80
209 210 4.616192 TGCATCGCACGCTTCTTAAAGC 62.616 50.000 0.05 0.05 43.39 3.51
210 211 1.128507 TGCATCGCACGCTTCTTAAAG 59.871 47.619 0.00 0.00 31.71 1.85
211 212 1.152510 TGCATCGCACGCTTCTTAAA 58.847 45.000 0.00 0.00 31.71 1.52
212 213 1.128507 CTTGCATCGCACGCTTCTTAA 59.871 47.619 0.00 0.00 38.71 1.85
213 214 0.721154 CTTGCATCGCACGCTTCTTA 59.279 50.000 0.00 0.00 38.71 2.10
214 215 1.499056 CTTGCATCGCACGCTTCTT 59.501 52.632 0.00 0.00 38.71 2.52
215 216 3.171987 CTTGCATCGCACGCTTCT 58.828 55.556 0.00 0.00 38.71 2.85
220 221 1.713937 TATTGGGCTTGCATCGCACG 61.714 55.000 10.21 0.00 38.71 5.34
221 222 0.029834 CTATTGGGCTTGCATCGCAC 59.970 55.000 10.21 7.25 38.71 5.34
222 223 0.394216 ACTATTGGGCTTGCATCGCA 60.394 50.000 10.21 6.50 36.47 5.10
223 224 0.029834 CACTATTGGGCTTGCATCGC 59.970 55.000 0.00 0.00 0.00 4.58
224 225 1.382522 ACACTATTGGGCTTGCATCG 58.617 50.000 0.00 0.00 0.00 3.84
225 226 3.304928 GCATACACTATTGGGCTTGCATC 60.305 47.826 0.00 0.00 0.00 3.91
226 227 2.624838 GCATACACTATTGGGCTTGCAT 59.375 45.455 0.00 0.00 0.00 3.96
227 228 2.023673 GCATACACTATTGGGCTTGCA 58.976 47.619 0.44 0.00 0.00 4.08
228 229 1.002468 CGCATACACTATTGGGCTTGC 60.002 52.381 0.00 0.00 0.00 4.01
229 230 1.603802 CCGCATACACTATTGGGCTTG 59.396 52.381 0.00 0.00 0.00 4.01
230 231 1.476833 CCCGCATACACTATTGGGCTT 60.477 52.381 0.00 0.00 0.00 4.35
231 232 0.108585 CCCGCATACACTATTGGGCT 59.891 55.000 0.00 0.00 0.00 5.19
232 233 2.629002 CCCGCATACACTATTGGGC 58.371 57.895 0.00 0.00 0.00 5.36
233 234 0.108585 AGCCCGCATACACTATTGGG 59.891 55.000 0.00 0.00 39.72 4.12
234 235 2.413837 GTAGCCCGCATACACTATTGG 58.586 52.381 0.00 0.00 0.00 3.16
235 236 2.224185 TGGTAGCCCGCATACACTATTG 60.224 50.000 0.00 0.00 0.00 1.90
236 237 2.043992 TGGTAGCCCGCATACACTATT 58.956 47.619 0.00 0.00 0.00 1.73
237 238 1.712056 TGGTAGCCCGCATACACTAT 58.288 50.000 0.00 0.00 0.00 2.12
238 239 1.487300 TTGGTAGCCCGCATACACTA 58.513 50.000 0.00 0.00 0.00 2.74
239 240 0.616371 TTTGGTAGCCCGCATACACT 59.384 50.000 0.00 0.00 0.00 3.55
240 241 0.730840 GTTTGGTAGCCCGCATACAC 59.269 55.000 0.00 0.00 0.00 2.90
241 242 0.325272 TGTTTGGTAGCCCGCATACA 59.675 50.000 0.00 0.00 0.00 2.29
242 243 1.014352 CTGTTTGGTAGCCCGCATAC 58.986 55.000 0.00 0.00 0.00 2.39
243 244 0.107410 CCTGTTTGGTAGCCCGCATA 60.107 55.000 0.00 0.00 0.00 3.14
244 245 1.378514 CCTGTTTGGTAGCCCGCAT 60.379 57.895 0.00 0.00 0.00 4.73
245 246 2.033448 CCTGTTTGGTAGCCCGCA 59.967 61.111 0.00 0.00 0.00 5.69
246 247 3.440415 GCCTGTTTGGTAGCCCGC 61.440 66.667 0.00 0.00 38.35 6.13
247 248 2.750237 GGCCTGTTTGGTAGCCCG 60.750 66.667 0.00 0.00 39.60 6.13
248 249 2.750237 CGGCCTGTTTGGTAGCCC 60.750 66.667 0.00 0.00 42.66 5.19
249 250 0.679960 ATTCGGCCTGTTTGGTAGCC 60.680 55.000 0.00 0.00 42.18 3.93
250 251 0.733150 GATTCGGCCTGTTTGGTAGC 59.267 55.000 0.00 0.00 38.35 3.58
251 252 1.065418 AGGATTCGGCCTGTTTGGTAG 60.065 52.381 0.00 0.00 36.76 3.18
252 253 0.988832 AGGATTCGGCCTGTTTGGTA 59.011 50.000 0.00 0.00 36.76 3.25
253 254 0.112412 AAGGATTCGGCCTGTTTGGT 59.888 50.000 0.00 0.00 38.58 3.67
254 255 0.811281 GAAGGATTCGGCCTGTTTGG 59.189 55.000 0.00 0.00 38.58 3.28
265 266 2.962253 CTCGCGCGGGAAGGATTC 60.962 66.667 29.20 0.00 46.67 2.52
275 276 2.461110 ATAAAACCAGGCTCGCGCG 61.461 57.895 26.76 26.76 36.88 6.86
276 277 1.062525 CATAAAACCAGGCTCGCGC 59.937 57.895 0.00 0.00 0.00 6.86
277 278 1.062525 GCATAAAACCAGGCTCGCG 59.937 57.895 0.00 0.00 0.00 5.87
278 279 1.062525 CGCATAAAACCAGGCTCGC 59.937 57.895 0.00 0.00 0.00 5.03
279 280 1.714899 CCCGCATAAAACCAGGCTCG 61.715 60.000 0.00 0.00 0.00 5.03
280 281 2.004808 GCCCGCATAAAACCAGGCTC 62.005 60.000 0.00 0.00 37.42 4.70
281 282 2.052104 GCCCGCATAAAACCAGGCT 61.052 57.895 0.00 0.00 37.42 4.58
282 283 1.882989 TTGCCCGCATAAAACCAGGC 61.883 55.000 0.00 0.00 40.87 4.85
283 284 0.108851 GTTGCCCGCATAAAACCAGG 60.109 55.000 0.00 0.00 0.00 4.45
284 285 0.108851 GGTTGCCCGCATAAAACCAG 60.109 55.000 3.86 0.00 41.44 4.00
285 286 1.968310 GGTTGCCCGCATAAAACCA 59.032 52.632 3.86 0.00 41.44 3.67
286 287 0.318762 TTGGTTGCCCGCATAAAACC 59.681 50.000 1.99 1.99 42.03 3.27
287 288 1.795872 GTTTGGTTGCCCGCATAAAAC 59.204 47.619 0.00 0.00 0.00 2.43
288 289 1.412710 TGTTTGGTTGCCCGCATAAAA 59.587 42.857 0.00 0.00 0.00 1.52
289 290 1.040646 TGTTTGGTTGCCCGCATAAA 58.959 45.000 0.00 0.00 0.00 1.40
290 291 0.315568 GTGTTTGGTTGCCCGCATAA 59.684 50.000 0.00 0.00 0.00 1.90
291 292 1.857318 CGTGTTTGGTTGCCCGCATA 61.857 55.000 0.00 0.00 0.00 3.14
292 293 2.733945 GTGTTTGGTTGCCCGCAT 59.266 55.556 0.00 0.00 0.00 4.73
293 294 3.893763 CGTGTTTGGTTGCCCGCA 61.894 61.111 0.00 0.00 0.00 5.69
295 296 4.639171 GGCGTGTTTGGTTGCCCG 62.639 66.667 0.00 0.00 41.70 6.13
297 298 1.248101 ATAGGGCGTGTTTGGTTGCC 61.248 55.000 0.00 0.00 46.82 4.52
298 299 0.109319 CATAGGGCGTGTTTGGTTGC 60.109 55.000 0.00 0.00 0.00 4.17
299 300 1.068610 CACATAGGGCGTGTTTGGTTG 60.069 52.381 0.00 0.00 0.00 3.77
300 301 1.243902 CACATAGGGCGTGTTTGGTT 58.756 50.000 0.00 0.00 0.00 3.67
301 302 0.608035 CCACATAGGGCGTGTTTGGT 60.608 55.000 1.48 0.00 32.26 3.67
302 303 0.322098 TCCACATAGGGCGTGTTTGG 60.322 55.000 3.08 3.08 38.24 3.28
303 304 1.086696 CTCCACATAGGGCGTGTTTG 58.913 55.000 0.00 0.00 38.24 2.93
304 305 0.035439 CCTCCACATAGGGCGTGTTT 60.035 55.000 0.00 0.00 38.24 2.83
305 306 0.907704 TCCTCCACATAGGGCGTGTT 60.908 55.000 0.00 0.00 37.24 3.32
306 307 1.305802 TCCTCCACATAGGGCGTGT 60.306 57.895 0.00 0.00 37.24 4.49
307 308 1.043116 TCTCCTCCACATAGGGCGTG 61.043 60.000 0.00 0.00 37.24 5.34
308 309 1.043673 GTCTCCTCCACATAGGGCGT 61.044 60.000 0.00 0.00 37.24 5.68
309 310 0.757188 AGTCTCCTCCACATAGGGCG 60.757 60.000 0.00 0.00 37.24 6.13
310 311 0.755686 CAGTCTCCTCCACATAGGGC 59.244 60.000 0.00 0.00 37.24 5.19
311 312 2.315176 CTCAGTCTCCTCCACATAGGG 58.685 57.143 0.00 0.00 37.24 3.53
312 313 2.315176 CCTCAGTCTCCTCCACATAGG 58.685 57.143 0.00 0.00 38.06 2.57
327 328 4.517934 CCCCTGGGCATGCCTCAG 62.518 72.222 32.26 32.26 35.54 3.35
344 345 1.880675 TCTAATGATCGGTCGAGAGGC 59.119 52.381 0.00 0.00 0.00 4.70
353 354 4.398988 CCTCCATCTCTCTCTAATGATCGG 59.601 50.000 0.00 0.00 0.00 4.18
354 355 4.398988 CCCTCCATCTCTCTCTAATGATCG 59.601 50.000 0.00 0.00 0.00 3.69
360 361 2.448961 CCCTCCCTCCATCTCTCTCTAA 59.551 54.545 0.00 0.00 0.00 2.10
364 365 0.859760 CTCCCTCCCTCCATCTCTCT 59.140 60.000 0.00 0.00 0.00 3.10
374 375 3.039526 CTCCCTCCCTCCCTCCCT 61.040 72.222 0.00 0.00 0.00 4.20
376 377 4.179599 CCCTCCCTCCCTCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
378 379 3.039526 CTCCCTCCCTCCCTCCCT 61.040 72.222 0.00 0.00 0.00 4.20
386 387 1.010793 TCTCTCTCTCTCTCCCTCCCT 59.989 57.143 0.00 0.00 0.00 4.20
389 390 3.545703 CAACTCTCTCTCTCTCTCCCTC 58.454 54.545 0.00 0.00 0.00 4.30
390 391 2.242196 CCAACTCTCTCTCTCTCTCCCT 59.758 54.545 0.00 0.00 0.00 4.20
393 394 3.366052 ACCCAACTCTCTCTCTCTCTC 57.634 52.381 0.00 0.00 0.00 3.20
394 395 3.825908 AACCCAACTCTCTCTCTCTCT 57.174 47.619 0.00 0.00 0.00 3.10
396 397 4.488770 AGAAAACCCAACTCTCTCTCTCT 58.511 43.478 0.00 0.00 0.00 3.10
397 398 4.282195 TGAGAAAACCCAACTCTCTCTCTC 59.718 45.833 0.00 0.00 37.17 3.20
398 399 4.039852 GTGAGAAAACCCAACTCTCTCTCT 59.960 45.833 0.00 0.00 37.17 3.10
399 400 4.311606 GTGAGAAAACCCAACTCTCTCTC 58.688 47.826 0.00 0.00 37.17 3.20
400 401 3.071747 GGTGAGAAAACCCAACTCTCTCT 59.928 47.826 0.00 0.00 37.17 3.10
401 402 3.403968 GGTGAGAAAACCCAACTCTCTC 58.596 50.000 0.00 0.00 37.17 3.20
402 403 2.224305 CGGTGAGAAAACCCAACTCTCT 60.224 50.000 0.00 0.00 37.17 3.10
403 404 2.143925 CGGTGAGAAAACCCAACTCTC 58.856 52.381 0.00 0.00 36.84 3.20
404 405 1.766496 TCGGTGAGAAAACCCAACTCT 59.234 47.619 0.00 0.00 36.84 3.24
405 406 1.871676 GTCGGTGAGAAAACCCAACTC 59.128 52.381 0.00 0.00 36.84 3.01
406 407 1.476291 GGTCGGTGAGAAAACCCAACT 60.476 52.381 0.00 0.00 36.84 3.16
407 408 0.949397 GGTCGGTGAGAAAACCCAAC 59.051 55.000 0.00 0.00 36.84 3.77
408 409 0.841289 AGGTCGGTGAGAAAACCCAA 59.159 50.000 0.00 0.00 36.84 4.12
409 410 0.107831 CAGGTCGGTGAGAAAACCCA 59.892 55.000 0.00 0.00 36.84 4.51
410 411 0.108019 ACAGGTCGGTGAGAAAACCC 59.892 55.000 0.00 0.00 36.84 4.11
411 412 1.509703 GACAGGTCGGTGAGAAAACC 58.490 55.000 0.00 0.00 36.82 3.27
449 450 0.584396 GATGTGTGTTGTTTCCGCGA 59.416 50.000 8.23 0.00 0.00 5.87
476 477 1.095228 ATTTGGTCGCATAGTGGCCG 61.095 55.000 0.00 0.00 41.20 6.13
477 478 0.381801 CATTTGGTCGCATAGTGGCC 59.618 55.000 0.00 0.00 38.44 5.36
531 545 2.879233 GCCGAACCCAGGAGTCACA 61.879 63.158 0.00 0.00 0.00 3.58
532 546 2.047179 GCCGAACCCAGGAGTCAC 60.047 66.667 0.00 0.00 0.00 3.67
557 571 2.168106 CCTCTTGATCTCCCTGTCACAG 59.832 54.545 0.00 0.00 0.00 3.66
580 607 3.406113 TAGCCCAGTAGCCCCTCCC 62.406 68.421 0.00 0.00 0.00 4.30
581 608 2.141448 GTAGCCCAGTAGCCCCTCC 61.141 68.421 0.00 0.00 0.00 4.30
582 609 2.141448 GGTAGCCCAGTAGCCCCTC 61.141 68.421 0.00 0.00 0.00 4.30
583 610 2.040779 GGTAGCCCAGTAGCCCCT 60.041 66.667 0.00 0.00 0.00 4.79
618 659 3.069289 AGACGGATTTGTAAACCCGAAC 58.931 45.455 16.60 9.78 42.68 3.95
628 669 3.146847 GGGAAAGTTGAGACGGATTTGT 58.853 45.455 0.00 0.00 0.00 2.83
647 688 5.300411 AGTAAACCCAATAAGATACGGGG 57.700 43.478 0.00 0.00 43.52 5.73
761 806 4.449743 TCGCGGGTTGCATTAATATTCTAC 59.550 41.667 6.13 0.00 46.97 2.59
791 836 0.474184 AAGTGTGCAGTACCCAAGCT 59.526 50.000 0.00 0.00 0.00 3.74
801 847 0.867746 TGAAGCGCTAAAGTGTGCAG 59.132 50.000 12.05 0.00 44.96 4.41
808 854 6.317088 TCTGATCATTTTTGAAGCGCTAAAG 58.683 36.000 12.05 0.00 0.00 1.85
818 864 8.741841 TGAACTGCAATATCTGATCATTTTTGA 58.258 29.630 0.00 0.00 0.00 2.69
878 924 3.003689 CCACTGTTCAGTTAGCAAACCAG 59.996 47.826 2.47 0.00 36.15 4.00
1026 1072 3.663815 GAGGAGGGTGCCGGAGAGA 62.664 68.421 5.05 0.00 0.00 3.10
1065 1111 3.371097 GAGGAAGCGGCGGTGATGA 62.371 63.158 14.17 0.00 0.00 2.92
1440 1489 2.440247 ATTTGCGCAGGGTAGGCC 60.440 61.111 11.31 0.00 0.00 5.19
1447 1496 1.804396 TTGTGGTGGATTTGCGCAGG 61.804 55.000 11.31 0.00 0.00 4.85
1664 1721 3.004752 ACTCCATCTACAAACATGGCC 57.995 47.619 0.00 0.00 39.69 5.36
1809 1866 1.068748 GTCTCGACGTGAAGCACCTTA 60.069 52.381 0.00 0.00 0.00 2.69
1836 1893 2.031616 GCTGGCTCACTGTGCAGA 59.968 61.111 15.23 0.00 0.00 4.26
1851 1908 7.168219 TCAACAAGTTCATTACCTTATCTGCT 58.832 34.615 0.00 0.00 0.00 4.24
2042 2135 7.506599 TGTCTGATATGGCAATACATTTCCAAT 59.493 33.333 0.00 0.00 36.69 3.16
2078 2171 8.644318 AAGCAAAATCATCTTAGCAATTCATC 57.356 30.769 0.00 0.00 0.00 2.92
2172 2267 7.334171 TGACACAATCACCAGATTACATAGTTG 59.666 37.037 0.00 0.00 42.46 3.16
2280 2376 5.120399 TCTACCAACACCAGTTAACACAAG 58.880 41.667 8.61 0.00 35.85 3.16
2296 2392 3.537795 ACTACACCAGACCTCTACCAA 57.462 47.619 0.00 0.00 0.00 3.67
2348 2448 7.222000 TGATAGTACAGTAACATCACACACA 57.778 36.000 0.00 0.00 0.00 3.72
2350 2450 8.527810 TCAATGATAGTACAGTAACATCACACA 58.472 33.333 7.28 0.00 0.00 3.72
2351 2451 8.926715 TCAATGATAGTACAGTAACATCACAC 57.073 34.615 7.28 0.00 0.00 3.82
2354 2454 9.045223 GCATTCAATGATAGTACAGTAACATCA 57.955 33.333 0.00 7.49 0.00 3.07
2355 2455 9.045223 TGCATTCAATGATAGTACAGTAACATC 57.955 33.333 0.00 0.00 0.00 3.06
2569 2681 6.310941 TCAAGTGGGGAAAAACAATCAGATA 58.689 36.000 0.00 0.00 0.00 1.98
2632 2745 2.696989 ACGCACATCCAGATTCATGA 57.303 45.000 0.00 0.00 0.00 3.07
2890 3005 7.744715 CGTTCCATAATGGCGTATAGATTTTTC 59.255 37.037 0.00 0.00 37.47 2.29
3004 3119 5.817296 GCATTGTATCAGTACCATTCTGTCA 59.183 40.000 0.00 0.00 34.86 3.58
3060 3175 9.191995 ACGGAAAATTTCACACTTTATCAATTC 57.808 29.630 8.09 0.00 0.00 2.17
3261 3377 4.094294 CGGAATCTTTAAAGCGTCCATCAA 59.906 41.667 24.90 4.51 31.75 2.57
3450 3566 6.732862 AGTTCTACTGGGATATATGATTGGCT 59.267 38.462 0.00 0.00 0.00 4.75
3579 3695 3.780294 AGGTATATTCTTGCTCACCCACA 59.220 43.478 0.00 0.00 0.00 4.17
3767 3887 9.700831 ATTAAACAGCCTAAAAACATAGGAGAT 57.299 29.630 4.58 0.00 44.46 2.75
3847 4216 8.226448 CAGTAGTTTCTTTCAGCTGAGTAAATG 58.774 37.037 17.43 9.60 0.00 2.32
4145 4515 4.393062 GCTGTTGCTAACTTGCTATCTCAA 59.607 41.667 0.00 0.00 36.03 3.02
4907 5277 2.124942 GGCCTTTCTCCTCCTGCG 60.125 66.667 0.00 0.00 0.00 5.18
4929 5299 1.517257 CTTCAGCTCGTAGCACCCG 60.517 63.158 9.09 0.00 45.56 5.28
5030 5400 0.459237 CTGGTGGCTCTAGCTGAACG 60.459 60.000 0.00 0.00 41.70 3.95
5091 5461 9.771534 GATGGTTAGAACTTATAAGAGCAGAAT 57.228 33.333 19.38 3.36 0.00 2.40
5107 5477 4.382685 CCGCAAGTAGGAAGATGGTTAGAA 60.383 45.833 0.00 0.00 0.00 2.10
5109 5479 3.118738 ACCGCAAGTAGGAAGATGGTTAG 60.119 47.826 0.00 0.00 0.00 2.34
5118 5488 2.244695 TCTCTGAACCGCAAGTAGGAA 58.755 47.619 0.00 0.00 0.00 3.36
5120 5490 2.969628 ATCTCTGAACCGCAAGTAGG 57.030 50.000 0.00 0.00 0.00 3.18
5153 5523 4.266714 ACATCAAAAATAGGTGTACCCCG 58.733 43.478 0.00 0.00 36.42 5.73
5184 5554 2.109739 AAACAACTCACCGCGTGCA 61.110 52.632 4.92 0.00 32.98 4.57
5185 5555 1.654137 CAAACAACTCACCGCGTGC 60.654 57.895 4.92 0.00 32.98 5.34
5226 5600 1.394572 CACATGCACACGTACCAGATG 59.605 52.381 0.00 0.00 0.00 2.90
5235 5609 1.460743 CCTCAGTTACACATGCACACG 59.539 52.381 0.00 0.00 0.00 4.49
5245 5619 7.556275 AGAAAGAAAACATGTTCCTCAGTTACA 59.444 33.333 12.39 0.00 0.00 2.41
5246 5620 7.931275 AGAAAGAAAACATGTTCCTCAGTTAC 58.069 34.615 12.39 4.14 0.00 2.50
5264 5638 5.635278 TGCCTGATCATCCATAGAAAGAA 57.365 39.130 0.00 0.00 0.00 2.52
5266 5640 7.336396 TGATATGCCTGATCATCCATAGAAAG 58.664 38.462 16.07 0.00 0.00 2.62
5271 5645 6.818281 TCATGATATGCCTGATCATCCATA 57.182 37.500 14.28 14.28 41.16 2.74
5294 5668 1.134037 TGGCTTCAGTAAACCACCGTT 60.134 47.619 0.00 0.00 0.00 4.44
5323 5697 1.929836 GCAATCAGCGAGTCTGGTTAG 59.070 52.381 0.00 0.00 44.00 2.34
5362 5736 2.115595 CTCTTCAGCTTGAGATACGCG 58.884 52.381 3.53 3.53 32.44 6.01
5365 5739 3.194062 GTGCCTCTTCAGCTTGAGATAC 58.806 50.000 9.08 5.04 32.44 2.24
5376 5750 2.243957 CGCGTTGTGTGCCTCTTCA 61.244 57.895 0.00 0.00 0.00 3.02
5432 5806 5.303971 CAGAATCCTTCTATAGGGCACTTG 58.696 45.833 0.00 0.00 44.86 3.16
5436 5810 4.213531 TCCAGAATCCTTCTATAGGGCA 57.786 45.455 0.00 0.00 44.86 5.36
5451 5825 5.820423 TCAACTGTCGAAGATTTTTCCAGAA 59.180 36.000 1.45 0.00 40.67 3.02
5457 5831 7.321745 AGAACTTCAACTGTCGAAGATTTTT 57.678 32.000 14.98 0.00 42.05 1.94
5475 5849 5.669477 TGCCTGCAACAATTAAAAGAACTT 58.331 33.333 0.00 0.00 0.00 2.66
5476 5850 5.275067 TGCCTGCAACAATTAAAAGAACT 57.725 34.783 0.00 0.00 0.00 3.01
5478 5852 4.630111 CCTGCCTGCAACAATTAAAAGAA 58.370 39.130 0.00 0.00 0.00 2.52
5479 5853 3.554752 GCCTGCCTGCAACAATTAAAAGA 60.555 43.478 0.00 0.00 0.00 2.52
5480 5854 2.738314 GCCTGCCTGCAACAATTAAAAG 59.262 45.455 0.00 0.00 0.00 2.27
5485 5859 1.252904 ATCGCCTGCCTGCAACAATT 61.253 50.000 0.00 0.00 0.00 2.32
5486 5860 0.394216 TATCGCCTGCCTGCAACAAT 60.394 50.000 0.00 0.00 0.00 2.71
5488 5862 1.745115 GTATCGCCTGCCTGCAACA 60.745 57.895 0.00 0.00 0.00 3.33
5489 5863 1.097547 ATGTATCGCCTGCCTGCAAC 61.098 55.000 0.00 0.00 0.00 4.17
5514 5892 7.287061 TCCATCCTTTTCTTTTCTCACTGTTA 58.713 34.615 0.00 0.00 0.00 2.41
5521 5899 7.811713 CAGACAAATCCATCCTTTTCTTTTCTC 59.188 37.037 0.00 0.00 0.00 2.87
5531 5910 5.972327 AGAGATCAGACAAATCCATCCTT 57.028 39.130 0.00 0.00 0.00 3.36
5532 5911 5.427806 TGAAGAGATCAGACAAATCCATCCT 59.572 40.000 0.00 0.00 33.04 3.24
5538 5917 5.233902 CCATCGTGAAGAGATCAGACAAATC 59.766 44.000 0.00 0.00 39.19 2.17
5573 5952 4.440112 GGATGTCCCGGAAGCAAATTTAAG 60.440 45.833 0.73 0.00 0.00 1.85
5620 5999 2.724690 ACAAAGAACGAGTCACGATTCG 59.275 45.455 10.01 10.01 45.77 3.34
5707 6088 4.065088 CCTTGAAAGTTCTCAATGACGGA 58.935 43.478 0.00 0.00 34.86 4.69
5708 6089 4.065088 TCCTTGAAAGTTCTCAATGACGG 58.935 43.478 0.00 1.64 34.86 4.79
5709 6090 5.673337 TTCCTTGAAAGTTCTCAATGACG 57.327 39.130 5.76 0.00 34.86 4.35
5732 6113 7.707624 TTTCTAACTTCTCGGGTCTTATACA 57.292 36.000 0.00 0.00 0.00 2.29
5733 6114 7.169476 GCATTTCTAACTTCTCGGGTCTTATAC 59.831 40.741 0.00 0.00 0.00 1.47
5735 6116 6.049790 GCATTTCTAACTTCTCGGGTCTTAT 58.950 40.000 0.00 0.00 0.00 1.73
5797 6187 1.142262 GGAAATACAGGTACCGCCCAT 59.858 52.381 6.18 0.00 38.26 4.00
5803 6193 5.934402 TCTCTCTTGGAAATACAGGTACC 57.066 43.478 2.73 2.73 0.00 3.34
5847 6237 7.485418 TGTCAAGACGCTTCAGTTTTATTTA 57.515 32.000 0.00 0.00 0.00 1.40
5849 6239 6.560253 ATGTCAAGACGCTTCAGTTTTATT 57.440 33.333 0.00 0.00 0.00 1.40
5851 6241 5.118050 CGTATGTCAAGACGCTTCAGTTTTA 59.882 40.000 0.00 0.00 33.77 1.52
5854 6244 2.987149 CGTATGTCAAGACGCTTCAGTT 59.013 45.455 0.00 0.00 33.77 3.16
5855 6245 2.596452 CGTATGTCAAGACGCTTCAGT 58.404 47.619 0.00 0.00 33.77 3.41
5856 6246 1.920574 CCGTATGTCAAGACGCTTCAG 59.079 52.381 5.37 0.00 39.67 3.02
5858 6248 1.278238 CCCGTATGTCAAGACGCTTC 58.722 55.000 5.37 0.00 39.67 3.86
5876 6308 2.228822 CCATTGTCTACTTTGTGCACCC 59.771 50.000 15.69 0.00 0.00 4.61
5909 6341 4.509616 TCCGTTGTCTTGTCTCAGAAAAA 58.490 39.130 0.00 0.00 0.00 1.94
5910 6342 4.131649 TCCGTTGTCTTGTCTCAGAAAA 57.868 40.909 0.00 0.00 0.00 2.29
5911 6343 3.812156 TCCGTTGTCTTGTCTCAGAAA 57.188 42.857 0.00 0.00 0.00 2.52
5912 6344 3.812156 TTCCGTTGTCTTGTCTCAGAA 57.188 42.857 0.00 0.00 0.00 3.02
5913 6345 4.058124 CAATTCCGTTGTCTTGTCTCAGA 58.942 43.478 0.00 0.00 33.01 3.27
5914 6346 3.364366 GCAATTCCGTTGTCTTGTCTCAG 60.364 47.826 0.00 0.00 40.07 3.35
5915 6347 2.548057 GCAATTCCGTTGTCTTGTCTCA 59.452 45.455 0.00 0.00 40.07 3.27
5916 6348 2.808543 AGCAATTCCGTTGTCTTGTCTC 59.191 45.455 0.00 0.00 40.07 3.36
5917 6349 2.851195 AGCAATTCCGTTGTCTTGTCT 58.149 42.857 0.00 0.00 40.07 3.41
5918 6350 4.742438 TTAGCAATTCCGTTGTCTTGTC 57.258 40.909 0.00 0.00 40.07 3.18
5919 6351 5.473504 AGAATTAGCAATTCCGTTGTCTTGT 59.526 36.000 14.21 0.00 46.65 3.16
5920 6352 5.796935 CAGAATTAGCAATTCCGTTGTCTTG 59.203 40.000 14.21 4.55 46.65 3.02
5921 6353 5.705441 TCAGAATTAGCAATTCCGTTGTCTT 59.295 36.000 14.21 0.00 46.65 3.01
5922 6354 5.245531 TCAGAATTAGCAATTCCGTTGTCT 58.754 37.500 14.21 0.00 46.65 3.41
5923 6355 5.122396 ACTCAGAATTAGCAATTCCGTTGTC 59.878 40.000 14.21 0.00 46.65 3.18
5924 6356 5.003804 ACTCAGAATTAGCAATTCCGTTGT 58.996 37.500 14.21 8.45 46.65 3.32
5925 6357 5.551760 ACTCAGAATTAGCAATTCCGTTG 57.448 39.130 14.21 9.06 46.65 4.10
5926 6358 5.619981 GCAACTCAGAATTAGCAATTCCGTT 60.620 40.000 14.21 12.57 46.65 4.44
5927 6359 4.142600 GCAACTCAGAATTAGCAATTCCGT 60.143 41.667 14.21 9.00 46.65 4.69
5928 6360 4.346129 GCAACTCAGAATTAGCAATTCCG 58.654 43.478 14.21 7.73 46.65 4.30
5929 6361 4.676546 GGCAACTCAGAATTAGCAATTCC 58.323 43.478 14.21 2.67 46.65 3.01
5941 6373 7.667219 AATTAAGAAATTCTCAGGCAACTCAGA 59.333 33.333 0.00 0.00 44.90 3.27
5942 6374 7.824672 AATTAAGAAATTCTCAGGCAACTCAG 58.175 34.615 0.00 0.00 35.92 3.35
5943 6375 7.765695 AATTAAGAAATTCTCAGGCAACTCA 57.234 32.000 0.00 0.00 35.92 3.41
5986 6418 5.890110 ACTAATCTGCATACAATCGAACG 57.110 39.130 0.00 0.00 0.00 3.95
5987 6419 7.426456 CACAAACTAATCTGCATACAATCGAAC 59.574 37.037 0.00 0.00 0.00 3.95
5988 6420 7.413988 CCACAAACTAATCTGCATACAATCGAA 60.414 37.037 0.00 0.00 0.00 3.71
5989 6421 6.037062 CCACAAACTAATCTGCATACAATCGA 59.963 38.462 0.00 0.00 0.00 3.59
5990 6422 6.194463 CCACAAACTAATCTGCATACAATCG 58.806 40.000 0.00 0.00 0.00 3.34
5991 6423 6.498304 CCCACAAACTAATCTGCATACAATC 58.502 40.000 0.00 0.00 0.00 2.67
5992 6424 5.163519 GCCCACAAACTAATCTGCATACAAT 60.164 40.000 0.00 0.00 0.00 2.71
5993 6425 4.157656 GCCCACAAACTAATCTGCATACAA 59.842 41.667 0.00 0.00 0.00 2.41
5994 6426 3.694072 GCCCACAAACTAATCTGCATACA 59.306 43.478 0.00 0.00 0.00 2.29
5995 6427 3.947834 AGCCCACAAACTAATCTGCATAC 59.052 43.478 0.00 0.00 0.00 2.39
5996 6428 4.235079 AGCCCACAAACTAATCTGCATA 57.765 40.909 0.00 0.00 0.00 3.14
5997 6429 3.091633 AGCCCACAAACTAATCTGCAT 57.908 42.857 0.00 0.00 0.00 3.96
5998 6430 2.557924 CAAGCCCACAAACTAATCTGCA 59.442 45.455 0.00 0.00 0.00 4.41
5999 6431 3.221964 CAAGCCCACAAACTAATCTGC 57.778 47.619 0.00 0.00 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.