Multiple sequence alignment - TraesCS3B01G123600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G123600 chr3B 100.000 3726 0 0 1 3726 95462962 95459237 0.000000e+00 6881.0
1 TraesCS3B01G123600 chr3D 92.209 3183 104 38 81 3185 59857663 59854547 0.000000e+00 4372.0
2 TraesCS3B01G123600 chr3A 94.109 1986 69 26 932 2897 68869742 68867785 0.000000e+00 2976.0
3 TraesCS3B01G123600 chr3A 89.099 899 35 29 83 928 68870676 68869788 0.000000e+00 1059.0
4 TraesCS3B01G123600 chr3A 90.909 77 4 2 3110 3183 68867331 68867255 2.370000e-17 100.0
5 TraesCS3B01G123600 chr2A 89.356 404 41 2 1267 1669 657813642 657813240 1.190000e-139 507.0
6 TraesCS3B01G123600 chr2D 89.109 404 42 2 1267 1669 513765035 513764633 5.560000e-138 501.0
7 TraesCS3B01G123600 chr6D 88.780 410 42 4 1267 1674 332499023 332499430 2.000000e-137 499.0
8 TraesCS3B01G123600 chr6D 93.182 44 3 0 2259 2302 332504167 332504210 8.640000e-07 65.8
9 TraesCS3B01G123600 chr6B 88.780 410 42 4 1267 1674 487835471 487835064 2.000000e-137 499.0
10 TraesCS3B01G123600 chr6B 95.122 41 2 0 2262 2302 487830043 487830003 8.640000e-07 65.8
11 TraesCS3B01G123600 chr4A 89.250 400 38 3 1267 1665 34787856 34787461 2.580000e-136 496.0
12 TraesCS3B01G123600 chr6A 88.778 401 43 2 1267 1666 471800554 471800953 1.200000e-134 490.0
13 TraesCS3B01G123600 chr6A 93.182 44 3 0 2259 2302 471806072 471806115 8.640000e-07 65.8
14 TraesCS3B01G123600 chr4B 87.799 418 46 3 1267 1683 531580983 531580570 5.600000e-133 484.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G123600 chr3B 95459237 95462962 3725 True 6881.000000 6881 100.000000 1 3726 1 chr3B.!!$R1 3725
1 TraesCS3B01G123600 chr3D 59854547 59857663 3116 True 4372.000000 4372 92.209000 81 3185 1 chr3D.!!$R1 3104
2 TraesCS3B01G123600 chr3A 68867255 68870676 3421 True 1378.333333 2976 91.372333 83 3183 3 chr3A.!!$R1 3100

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
701 780 0.034059 ACCTCGGTTCTTGCTCACAG 59.966 55.0 0.0 0.0 0.00 3.66 F
930 1055 0.102481 GATCCGTGTGCGTATGTCCT 59.898 55.0 0.0 0.0 36.15 3.85 F
2003 2147 0.107017 CCACGGGCTGATCCAAGAAT 60.107 55.0 0.0 0.0 36.21 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2497 2668 0.381801 CATTACGATTGGCACTGGGC 59.618 55.0 0.00 0.00 43.74 5.36 R
2634 2805 0.883814 CATGCAGGGATCGAAGCCTC 60.884 60.0 7.51 0.00 0.00 4.70 R
3388 3842 0.244450 CACCATGGAGTGCGCATTTT 59.756 50.0 21.47 1.72 0.00 1.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.508526 CCATACAGAAATAGCAGCCCC 58.491 52.381 0.00 0.00 0.00 5.80
21 22 2.107204 CCATACAGAAATAGCAGCCCCT 59.893 50.000 0.00 0.00 0.00 4.79
22 23 3.144506 CATACAGAAATAGCAGCCCCTG 58.855 50.000 0.00 0.00 34.12 4.45
23 24 1.289160 ACAGAAATAGCAGCCCCTGA 58.711 50.000 0.00 0.00 32.44 3.86
24 25 1.635487 ACAGAAATAGCAGCCCCTGAA 59.365 47.619 0.00 0.00 32.44 3.02
25 26 2.243221 ACAGAAATAGCAGCCCCTGAAT 59.757 45.455 0.00 0.00 32.44 2.57
26 27 3.459598 ACAGAAATAGCAGCCCCTGAATA 59.540 43.478 0.00 0.00 32.44 1.75
27 28 3.817647 CAGAAATAGCAGCCCCTGAATAC 59.182 47.826 0.00 0.00 32.44 1.89
28 29 3.718956 AGAAATAGCAGCCCCTGAATACT 59.281 43.478 0.00 0.00 32.44 2.12
29 30 3.498774 AATAGCAGCCCCTGAATACTG 57.501 47.619 0.00 0.00 32.44 2.74
30 31 1.879575 TAGCAGCCCCTGAATACTGT 58.120 50.000 0.00 0.00 32.44 3.55
31 32 0.254178 AGCAGCCCCTGAATACTGTG 59.746 55.000 0.00 0.00 32.44 3.66
32 33 0.253044 GCAGCCCCTGAATACTGTGA 59.747 55.000 0.00 0.00 32.44 3.58
33 34 1.340017 GCAGCCCCTGAATACTGTGAA 60.340 52.381 0.00 0.00 32.44 3.18
34 35 2.879756 GCAGCCCCTGAATACTGTGAAA 60.880 50.000 0.00 0.00 32.44 2.69
35 36 3.624777 CAGCCCCTGAATACTGTGAAAT 58.375 45.455 0.00 0.00 32.44 2.17
36 37 4.780815 CAGCCCCTGAATACTGTGAAATA 58.219 43.478 0.00 0.00 32.44 1.40
37 38 5.192927 CAGCCCCTGAATACTGTGAAATAA 58.807 41.667 0.00 0.00 32.44 1.40
38 39 5.652014 CAGCCCCTGAATACTGTGAAATAAA 59.348 40.000 0.00 0.00 32.44 1.40
39 40 5.888161 AGCCCCTGAATACTGTGAAATAAAG 59.112 40.000 0.00 0.00 0.00 1.85
40 41 5.885912 GCCCCTGAATACTGTGAAATAAAGA 59.114 40.000 0.00 0.00 0.00 2.52
41 42 6.547510 GCCCCTGAATACTGTGAAATAAAGAT 59.452 38.462 0.00 0.00 0.00 2.40
42 43 7.719633 GCCCCTGAATACTGTGAAATAAAGATA 59.280 37.037 0.00 0.00 0.00 1.98
43 44 9.799106 CCCCTGAATACTGTGAAATAAAGATAT 57.201 33.333 0.00 0.00 0.00 1.63
61 62 7.521509 AAGATATAACTTTCTGTTTCGACGG 57.478 36.000 0.00 0.00 39.89 4.79
62 63 6.628185 AGATATAACTTTCTGTTTCGACGGT 58.372 36.000 0.00 0.00 39.89 4.83
63 64 7.765307 AGATATAACTTTCTGTTTCGACGGTA 58.235 34.615 0.00 0.00 39.89 4.02
64 65 7.699812 AGATATAACTTTCTGTTTCGACGGTAC 59.300 37.037 0.00 0.00 39.89 3.34
65 66 2.747436 ACTTTCTGTTTCGACGGTACC 58.253 47.619 0.16 0.16 0.00 3.34
66 67 2.363359 ACTTTCTGTTTCGACGGTACCT 59.637 45.455 10.90 0.00 0.00 3.08
67 68 3.569701 ACTTTCTGTTTCGACGGTACCTA 59.430 43.478 10.90 0.00 0.00 3.08
68 69 4.037923 ACTTTCTGTTTCGACGGTACCTAA 59.962 41.667 10.90 0.00 0.00 2.69
69 70 4.582701 TTCTGTTTCGACGGTACCTAAA 57.417 40.909 10.90 2.65 0.00 1.85
70 71 4.789012 TCTGTTTCGACGGTACCTAAAT 57.211 40.909 10.90 0.00 0.00 1.40
71 72 5.895636 TCTGTTTCGACGGTACCTAAATA 57.104 39.130 10.90 3.28 0.00 1.40
72 73 6.266168 TCTGTTTCGACGGTACCTAAATAA 57.734 37.500 10.90 0.00 0.00 1.40
73 74 6.866480 TCTGTTTCGACGGTACCTAAATAAT 58.134 36.000 10.90 0.00 0.00 1.28
74 75 7.322664 TCTGTTTCGACGGTACCTAAATAATT 58.677 34.615 10.90 0.00 0.00 1.40
75 76 7.818930 TCTGTTTCGACGGTACCTAAATAATTT 59.181 33.333 10.90 0.00 0.00 1.82
76 77 7.741198 TGTTTCGACGGTACCTAAATAATTTG 58.259 34.615 10.90 0.00 0.00 2.32
77 78 5.971895 TCGACGGTACCTAAATAATTTGC 57.028 39.130 10.90 0.00 0.00 3.68
78 79 5.663456 TCGACGGTACCTAAATAATTTGCT 58.337 37.500 10.90 0.00 0.00 3.91
79 80 5.750067 TCGACGGTACCTAAATAATTTGCTC 59.250 40.000 10.90 0.00 0.00 4.26
89 90 5.528043 AAATAATTTGCTCCACACACACA 57.472 34.783 0.00 0.00 0.00 3.72
95 97 0.179045 GCTCCACACACACACTCCTT 60.179 55.000 0.00 0.00 0.00 3.36
233 249 7.062322 AGCAAGATCACCACCATTCATTATTA 58.938 34.615 0.00 0.00 0.00 0.98
247 263 7.616935 CCATTCATTATTAGTAATCCCCTGCAT 59.383 37.037 0.00 0.00 0.00 3.96
342 359 3.428725 GCATCAGAAGTCACACGAGAGAT 60.429 47.826 0.00 0.00 0.00 2.75
344 361 5.507149 GCATCAGAAGTCACACGAGAGATAT 60.507 44.000 0.00 0.00 0.00 1.63
350 367 6.929049 AGAAGTCACACGAGAGATATAGAGAG 59.071 42.308 0.00 0.00 0.00 3.20
353 370 5.120208 GTCACACGAGAGATATAGAGAGAGC 59.880 48.000 0.00 0.00 0.00 4.09
433 473 6.884295 TGTTTTTAGAGAGAGAGAGAGAGAGG 59.116 42.308 0.00 0.00 0.00 3.69
435 475 3.421394 AGAGAGAGAGAGAGAGAGGGA 57.579 52.381 0.00 0.00 0.00 4.20
436 476 3.312890 AGAGAGAGAGAGAGAGAGGGAG 58.687 54.545 0.00 0.00 0.00 4.30
437 477 3.051803 AGAGAGAGAGAGAGAGAGGGAGA 60.052 52.174 0.00 0.00 0.00 3.71
438 478 3.312890 AGAGAGAGAGAGAGAGGGAGAG 58.687 54.545 0.00 0.00 0.00 3.20
439 479 3.041946 GAGAGAGAGAGAGAGGGAGAGT 58.958 54.545 0.00 0.00 0.00 3.24
440 480 4.078571 AGAGAGAGAGAGAGAGGGAGAGTA 60.079 50.000 0.00 0.00 0.00 2.59
598 663 4.718961 ACCTGGTTGGCATAGCTTATTAG 58.281 43.478 0.00 0.00 40.22 1.73
599 664 4.988364 ACCTGGTTGGCATAGCTTATTAGC 60.988 45.833 0.00 0.00 43.24 3.09
679 758 3.666784 CGATAGCTCAGTCGATCGG 57.333 57.895 16.41 0.00 40.11 4.18
701 780 0.034059 ACCTCGGTTCTTGCTCACAG 59.966 55.000 0.00 0.00 0.00 3.66
766 845 2.042026 TGTGGTGCTACTACTAGTCCCA 59.958 50.000 0.00 0.00 30.28 4.37
769 849 2.376109 GTGCTACTACTAGTCCCAGCA 58.624 52.381 16.87 16.87 35.61 4.41
780 860 1.489649 AGTCCCAGCATCAGGATTCAG 59.510 52.381 0.00 0.00 33.88 3.02
889 972 1.208776 CAGGTCAGGCTCACATGATCA 59.791 52.381 0.00 0.00 0.00 2.92
921 1046 1.211818 GCGAGATCTGATCCGTGTGC 61.212 60.000 21.21 12.80 0.00 4.57
924 1049 1.333931 GAGATCTGATCCGTGTGCGTA 59.666 52.381 13.83 0.00 36.15 4.42
928 1053 1.200483 CTGATCCGTGTGCGTATGTC 58.800 55.000 0.00 0.00 36.15 3.06
929 1054 0.179121 TGATCCGTGTGCGTATGTCC 60.179 55.000 0.00 0.00 36.15 4.02
930 1055 0.102481 GATCCGTGTGCGTATGTCCT 59.898 55.000 0.00 0.00 36.15 3.85
1195 1327 5.067936 GGTGAATTCTCCTTCTGATCGACTA 59.932 44.000 17.49 0.00 0.00 2.59
1217 1352 9.109393 GACTATATGCTGTTCTTGGTTATTTGA 57.891 33.333 0.00 0.00 0.00 2.69
1614 1749 2.286523 CGACTGGAAGGCCCACTCT 61.287 63.158 0.00 0.00 40.92 3.24
1673 1808 1.373497 CGCTCTTCTCAAGGCACGT 60.373 57.895 0.00 0.00 0.00 4.49
1706 1841 0.174617 CCGGCCTCACTCTTCTTCTC 59.825 60.000 0.00 0.00 0.00 2.87
1714 1849 2.040545 TCACTCTTCTTCTCCTCCGTCT 59.959 50.000 0.00 0.00 0.00 4.18
1716 1851 3.086282 ACTCTTCTTCTCCTCCGTCTTC 58.914 50.000 0.00 0.00 0.00 2.87
1921 2065 1.433879 GATGCTCTACTCGCACGGT 59.566 57.895 0.00 0.00 40.65 4.83
2003 2147 0.107017 CCACGGGCTGATCCAAGAAT 60.107 55.000 0.00 0.00 36.21 2.40
2082 2226 2.639883 CTATCGGAGCAGCAGCAGCA 62.640 60.000 12.92 0.00 45.49 4.41
2083 2227 2.639883 TATCGGAGCAGCAGCAGCAG 62.640 60.000 12.92 3.23 45.49 4.24
2097 2241 3.210528 GCAGCAGCTGGAGATGGC 61.211 66.667 24.13 3.55 37.91 4.40
2200 2344 4.428845 CCTGTGGGCATGAGCTTT 57.571 55.556 0.00 0.00 41.70 3.51
2221 2380 0.170561 CGTCATTTCCCTCGTCGTCT 59.829 55.000 0.00 0.00 0.00 4.18
2222 2381 1.630148 GTCATTTCCCTCGTCGTCTG 58.370 55.000 0.00 0.00 0.00 3.51
2223 2382 0.108804 TCATTTCCCTCGTCGTCTGC 60.109 55.000 0.00 0.00 0.00 4.26
2224 2383 1.153823 ATTTCCCTCGTCGTCTGCG 60.154 57.895 0.00 0.00 39.92 5.18
2225 2384 2.558554 ATTTCCCTCGTCGTCTGCGG 62.559 60.000 0.00 0.00 38.89 5.69
2356 2524 3.797546 GCAGCGAGCACCTTCAGC 61.798 66.667 0.00 0.00 44.79 4.26
2357 2525 2.357881 CAGCGAGCACCTTCAGCA 60.358 61.111 0.00 0.00 0.00 4.41
2358 2526 2.047465 AGCGAGCACCTTCAGCAG 60.047 61.111 0.00 0.00 0.00 4.24
2359 2527 2.358003 GCGAGCACCTTCAGCAGT 60.358 61.111 0.00 0.00 0.00 4.40
2497 2668 0.900647 ACTTCGGAGTGGACCAGAGG 60.901 60.000 0.00 0.00 33.99 3.69
2515 2686 2.793831 GCCCAGTGCCAATCGTAAT 58.206 52.632 0.00 0.00 0.00 1.89
2698 2869 1.883084 GTACGATCAGCAAGGGCCG 60.883 63.158 0.00 0.00 42.56 6.13
2742 2913 3.877508 GGCTAGTAATCAACCTCGCAATT 59.122 43.478 0.00 0.00 0.00 2.32
2782 2953 4.495690 TTGATGAACCGAACCATATCCA 57.504 40.909 0.00 0.00 0.00 3.41
2785 2956 3.992943 TGAACCGAACCATATCCAAGT 57.007 42.857 0.00 0.00 0.00 3.16
2797 2968 6.576185 ACCATATCCAAGTTTGATGATTTGC 58.424 36.000 0.00 0.00 0.00 3.68
2819 2990 1.135141 GCGGCATGCAATGGACTAAAA 60.135 47.619 21.36 0.00 46.86 1.52
2902 3073 3.691609 CAGTAAGTTGGATTCAGCCTTCC 59.308 47.826 0.00 0.00 0.00 3.46
2930 3101 7.410835 GCCGATAAAGCAAAATCAAGTTCTTTC 60.411 37.037 0.00 0.00 0.00 2.62
2942 3113 4.810491 TCAAGTTCTTTCATTTTGCTTGCC 59.190 37.500 0.00 0.00 33.88 4.52
2948 3119 4.039488 TCTTTCATTTTGCTTGCCACTCAT 59.961 37.500 0.00 0.00 0.00 2.90
2957 3128 5.314923 TGCTTGCCACTCATTTTATCTTC 57.685 39.130 0.00 0.00 0.00 2.87
2962 3133 7.148689 GCTTGCCACTCATTTTATCTTCTTTTG 60.149 37.037 0.00 0.00 0.00 2.44
2963 3134 6.690530 TGCCACTCATTTTATCTTCTTTTGG 58.309 36.000 0.00 0.00 0.00 3.28
2973 3149 4.953781 ATCTTCTTTTGGGGAGGAATGA 57.046 40.909 0.00 0.00 0.00 2.57
2982 3424 1.561542 GGGGAGGAATGAGCTCTTCAA 59.438 52.381 16.19 0.00 39.77 2.69
3052 3503 8.331730 TCATAATTAATCCATGCATGTCTCTG 57.668 34.615 24.58 9.57 0.00 3.35
3053 3504 7.940688 TCATAATTAATCCATGCATGTCTCTGT 59.059 33.333 24.58 7.42 0.00 3.41
3057 3508 3.979101 TCCATGCATGTCTCTGTTGTA 57.021 42.857 24.58 0.00 0.00 2.41
3058 3509 4.284829 TCCATGCATGTCTCTGTTGTAA 57.715 40.909 24.58 0.00 0.00 2.41
3093 3544 9.772973 ATGATTTAGCCGTTCTTTACATACATA 57.227 29.630 0.00 0.00 0.00 2.29
3108 3559 9.537192 TTTACATACATATGTTACTACCAGTGC 57.463 33.333 14.77 0.00 43.99 4.40
3122 3573 3.674997 ACCAGTGCTCATGTCGTTTATT 58.325 40.909 0.00 0.00 0.00 1.40
3165 3619 9.661563 TTATGAGATGAATTAACGTTTACCACT 57.338 29.630 5.91 0.00 0.00 4.00
3180 3634 6.346359 CGTTTACCACTGTTCTGTTTACTAGC 60.346 42.308 0.00 0.00 0.00 3.42
3185 3639 5.163953 CCACTGTTCTGTTTACTAGCGAATG 60.164 44.000 0.00 0.00 0.00 2.67
3186 3640 5.633601 CACTGTTCTGTTTACTAGCGAATGA 59.366 40.000 0.00 0.00 0.00 2.57
3187 3641 6.311445 CACTGTTCTGTTTACTAGCGAATGAT 59.689 38.462 0.00 0.00 0.00 2.45
3188 3642 6.874134 ACTGTTCTGTTTACTAGCGAATGATT 59.126 34.615 0.00 0.00 0.00 2.57
3189 3643 7.063544 ACTGTTCTGTTTACTAGCGAATGATTC 59.936 37.037 0.00 0.00 0.00 2.52
3190 3644 7.097192 TGTTCTGTTTACTAGCGAATGATTCT 58.903 34.615 3.43 0.00 0.00 2.40
3191 3645 7.063426 TGTTCTGTTTACTAGCGAATGATTCTG 59.937 37.037 3.43 0.00 0.00 3.02
3192 3646 6.863275 TCTGTTTACTAGCGAATGATTCTGA 58.137 36.000 3.43 0.00 0.00 3.27
3193 3647 7.320399 TCTGTTTACTAGCGAATGATTCTGAA 58.680 34.615 3.43 0.00 0.00 3.02
3194 3648 7.981789 TCTGTTTACTAGCGAATGATTCTGAAT 59.018 33.333 1.81 1.81 0.00 2.57
3195 3649 7.909267 TGTTTACTAGCGAATGATTCTGAATG 58.091 34.615 7.78 0.00 0.00 2.67
3196 3650 6.530913 TTACTAGCGAATGATTCTGAATGC 57.469 37.500 7.78 4.66 0.00 3.56
3197 3651 4.701765 ACTAGCGAATGATTCTGAATGCT 58.298 39.130 7.78 11.76 35.34 3.79
3198 3652 3.965292 AGCGAATGATTCTGAATGCTG 57.035 42.857 7.78 0.00 0.00 4.41
3199 3653 3.538591 AGCGAATGATTCTGAATGCTGA 58.461 40.909 7.78 0.00 0.00 4.26
3200 3654 4.135306 AGCGAATGATTCTGAATGCTGAT 58.865 39.130 7.78 0.00 0.00 2.90
3201 3655 5.303165 AGCGAATGATTCTGAATGCTGATA 58.697 37.500 7.78 0.00 0.00 2.15
3202 3656 5.938710 AGCGAATGATTCTGAATGCTGATAT 59.061 36.000 7.78 0.00 0.00 1.63
3203 3657 7.101700 AGCGAATGATTCTGAATGCTGATATA 58.898 34.615 7.78 0.00 0.00 0.86
3204 3658 7.064371 AGCGAATGATTCTGAATGCTGATATAC 59.936 37.037 7.78 0.00 0.00 1.47
3205 3659 7.064371 GCGAATGATTCTGAATGCTGATATACT 59.936 37.037 7.78 0.00 0.00 2.12
3206 3660 8.381387 CGAATGATTCTGAATGCTGATATACTG 58.619 37.037 7.78 0.00 0.00 2.74
3207 3661 9.217278 GAATGATTCTGAATGCTGATATACTGT 57.783 33.333 7.78 0.00 0.00 3.55
3208 3662 9.570468 AATGATTCTGAATGCTGATATACTGTT 57.430 29.630 7.78 0.00 0.00 3.16
3209 3663 8.374327 TGATTCTGAATGCTGATATACTGTTG 57.626 34.615 7.78 0.00 0.00 3.33
3210 3664 7.989170 TGATTCTGAATGCTGATATACTGTTGT 59.011 33.333 7.78 0.00 0.00 3.32
3211 3665 9.481340 GATTCTGAATGCTGATATACTGTTGTA 57.519 33.333 7.78 0.00 0.00 2.41
3212 3666 8.648557 TTCTGAATGCTGATATACTGTTGTAC 57.351 34.615 0.00 0.00 0.00 2.90
3213 3667 6.918022 TCTGAATGCTGATATACTGTTGTACG 59.082 38.462 0.00 0.00 0.00 3.67
3214 3668 6.801575 TGAATGCTGATATACTGTTGTACGA 58.198 36.000 0.00 0.00 0.00 3.43
3215 3669 6.695713 TGAATGCTGATATACTGTTGTACGAC 59.304 38.462 6.27 6.27 0.00 4.34
3216 3670 4.594136 TGCTGATATACTGTTGTACGACG 58.406 43.478 8.73 6.21 0.00 5.12
3217 3671 4.095334 TGCTGATATACTGTTGTACGACGT 59.905 41.667 5.52 5.52 0.00 4.34
3218 3672 4.669728 GCTGATATACTGTTGTACGACGTC 59.330 45.833 2.43 5.18 0.00 4.34
3219 3673 5.728621 GCTGATATACTGTTGTACGACGTCA 60.729 44.000 17.16 0.00 0.00 4.35
3220 3674 5.803118 TGATATACTGTTGTACGACGTCAG 58.197 41.667 17.16 8.38 0.00 3.51
3221 3675 5.581874 TGATATACTGTTGTACGACGTCAGA 59.418 40.000 17.16 0.00 0.00 3.27
3222 3676 2.396160 ACTGTTGTACGACGTCAGAC 57.604 50.000 17.16 12.77 0.00 3.51
3223 3677 1.945394 ACTGTTGTACGACGTCAGACT 59.055 47.619 17.16 0.00 0.00 3.24
3224 3678 2.357009 ACTGTTGTACGACGTCAGACTT 59.643 45.455 17.16 0.00 0.00 3.01
3225 3679 3.561310 ACTGTTGTACGACGTCAGACTTA 59.439 43.478 17.16 2.75 0.00 2.24
3226 3680 3.877064 TGTTGTACGACGTCAGACTTAC 58.123 45.455 17.16 13.78 0.00 2.34
3227 3681 3.312146 TGTTGTACGACGTCAGACTTACA 59.688 43.478 17.16 15.81 0.00 2.41
3228 3682 3.800929 TGTACGACGTCAGACTTACAG 57.199 47.619 17.16 0.00 0.00 2.74
3229 3683 3.133691 TGTACGACGTCAGACTTACAGT 58.866 45.455 17.16 4.31 0.00 3.55
3230 3684 3.561310 TGTACGACGTCAGACTTACAGTT 59.439 43.478 17.16 0.00 0.00 3.16
3231 3685 4.749598 TGTACGACGTCAGACTTACAGTTA 59.250 41.667 17.16 0.00 0.00 2.24
3232 3686 4.401525 ACGACGTCAGACTTACAGTTAG 57.598 45.455 17.16 0.00 0.00 2.34
3233 3687 4.060900 ACGACGTCAGACTTACAGTTAGA 58.939 43.478 17.16 0.00 0.00 2.10
3234 3688 4.084118 ACGACGTCAGACTTACAGTTAGAC 60.084 45.833 17.16 0.00 32.51 2.59
3235 3689 4.152045 CGACGTCAGACTTACAGTTAGACT 59.848 45.833 17.16 0.00 33.19 3.24
3236 3690 5.347093 CGACGTCAGACTTACAGTTAGACTA 59.653 44.000 17.16 0.00 33.19 2.59
3237 3691 6.035866 CGACGTCAGACTTACAGTTAGACTAT 59.964 42.308 17.16 0.00 33.19 2.12
3238 3692 7.412781 CGACGTCAGACTTACAGTTAGACTATT 60.413 40.741 17.16 0.00 33.19 1.73
3239 3693 7.750769 ACGTCAGACTTACAGTTAGACTATTC 58.249 38.462 0.00 0.00 33.19 1.75
3240 3694 7.389884 ACGTCAGACTTACAGTTAGACTATTCA 59.610 37.037 0.00 0.00 33.19 2.57
3241 3695 8.235226 CGTCAGACTTACAGTTAGACTATTCAA 58.765 37.037 0.00 0.00 33.19 2.69
3242 3696 9.562583 GTCAGACTTACAGTTAGACTATTCAAG 57.437 37.037 0.00 0.00 32.85 3.02
3243 3697 9.516546 TCAGACTTACAGTTAGACTATTCAAGA 57.483 33.333 0.00 0.00 0.00 3.02
3244 3698 9.781834 CAGACTTACAGTTAGACTATTCAAGAG 57.218 37.037 0.00 0.00 0.00 2.85
3245 3699 9.523168 AGACTTACAGTTAGACTATTCAAGAGT 57.477 33.333 0.00 0.00 0.00 3.24
3251 3705 9.482175 ACAGTTAGACTATTCAAGAGTAATCCT 57.518 33.333 0.00 0.00 0.00 3.24
3263 3717 8.561738 TCAAGAGTAATCCTATTTCAAACACC 57.438 34.615 0.00 0.00 0.00 4.16
3264 3718 8.160765 TCAAGAGTAATCCTATTTCAAACACCA 58.839 33.333 0.00 0.00 0.00 4.17
3265 3719 8.960591 CAAGAGTAATCCTATTTCAAACACCAT 58.039 33.333 0.00 0.00 0.00 3.55
3266 3720 8.511604 AGAGTAATCCTATTTCAAACACCATG 57.488 34.615 0.00 0.00 0.00 3.66
3267 3721 8.109634 AGAGTAATCCTATTTCAAACACCATGT 58.890 33.333 0.00 0.00 0.00 3.21
3268 3722 8.055279 AGTAATCCTATTTCAAACACCATGTG 57.945 34.615 0.00 0.00 39.75 3.21
3270 3724 8.952278 GTAATCCTATTTCAAACACCATGTGTA 58.048 33.333 0.00 0.00 46.79 2.90
3271 3725 6.811253 TCCTATTTCAAACACCATGTGTAC 57.189 37.500 0.00 0.00 46.79 2.90
3272 3726 6.539173 TCCTATTTCAAACACCATGTGTACT 58.461 36.000 0.00 0.00 46.79 2.73
3273 3727 6.429692 TCCTATTTCAAACACCATGTGTACTG 59.570 38.462 0.00 2.25 46.79 2.74
3274 3728 6.206634 CCTATTTCAAACACCATGTGTACTGT 59.793 38.462 0.00 0.00 46.79 3.55
3275 3729 5.906113 TTTCAAACACCATGTGTACTGTT 57.094 34.783 0.00 0.00 46.79 3.16
3276 3730 7.575414 ATTTCAAACACCATGTGTACTGTTA 57.425 32.000 0.00 0.00 46.79 2.41
3277 3731 7.392494 TTTCAAACACCATGTGTACTGTTAA 57.608 32.000 0.00 0.11 46.79 2.01
3278 3732 7.575414 TTCAAACACCATGTGTACTGTTAAT 57.425 32.000 0.00 0.00 46.79 1.40
3279 3733 6.964908 TCAAACACCATGTGTACTGTTAATG 58.035 36.000 0.00 0.00 46.79 1.90
3280 3734 5.371115 AACACCATGTGTACTGTTAATGC 57.629 39.130 0.00 0.00 46.79 3.56
3281 3735 4.393834 ACACCATGTGTACTGTTAATGCA 58.606 39.130 0.00 0.00 45.56 3.96
3282 3736 5.009631 ACACCATGTGTACTGTTAATGCAT 58.990 37.500 0.00 0.00 45.56 3.96
3283 3737 5.106197 ACACCATGTGTACTGTTAATGCATG 60.106 40.000 0.00 0.00 45.56 4.06
3284 3738 5.009631 ACCATGTGTACTGTTAATGCATGT 58.990 37.500 0.00 0.00 32.77 3.21
3285 3739 5.123820 ACCATGTGTACTGTTAATGCATGTC 59.876 40.000 0.00 0.00 32.77 3.06
3286 3740 5.123661 CCATGTGTACTGTTAATGCATGTCA 59.876 40.000 0.00 0.00 32.77 3.58
3287 3741 6.183360 CCATGTGTACTGTTAATGCATGTCAT 60.183 38.462 0.00 0.00 36.87 3.06
3288 3742 7.012232 CCATGTGTACTGTTAATGCATGTCATA 59.988 37.037 0.00 0.00 34.33 2.15
3289 3743 7.913674 TGTGTACTGTTAATGCATGTCATAA 57.086 32.000 0.00 0.00 34.33 1.90
3290 3744 8.329203 TGTGTACTGTTAATGCATGTCATAAA 57.671 30.769 0.00 0.00 34.33 1.40
3291 3745 8.787852 TGTGTACTGTTAATGCATGTCATAAAA 58.212 29.630 0.00 0.00 34.33 1.52
3292 3746 9.619316 GTGTACTGTTAATGCATGTCATAAAAA 57.381 29.630 0.00 0.00 34.33 1.94
3315 3769 8.776376 AAAAATACTACATTTGGGAGCATTTG 57.224 30.769 0.00 0.00 0.00 2.32
3316 3770 7.480760 AAATACTACATTTGGGAGCATTTGT 57.519 32.000 0.00 0.00 0.00 2.83
3317 3771 6.699575 ATACTACATTTGGGAGCATTTGTC 57.300 37.500 0.00 0.00 0.00 3.18
3318 3772 4.406456 ACTACATTTGGGAGCATTTGTCA 58.594 39.130 0.00 0.00 0.00 3.58
3319 3773 4.832266 ACTACATTTGGGAGCATTTGTCAA 59.168 37.500 0.00 0.00 0.00 3.18
3320 3774 3.993920 ACATTTGGGAGCATTTGTCAAC 58.006 40.909 0.00 0.00 0.00 3.18
3321 3775 3.244181 ACATTTGGGAGCATTTGTCAACC 60.244 43.478 0.00 0.00 0.00 3.77
3322 3776 2.079170 TTGGGAGCATTTGTCAACCA 57.921 45.000 0.00 0.00 0.00 3.67
3323 3777 2.079170 TGGGAGCATTTGTCAACCAA 57.921 45.000 0.00 0.00 0.00 3.67
3324 3778 1.962807 TGGGAGCATTTGTCAACCAAG 59.037 47.619 0.00 0.00 33.75 3.61
3325 3779 1.963515 GGGAGCATTTGTCAACCAAGT 59.036 47.619 0.00 0.00 33.75 3.16
3326 3780 3.153919 GGGAGCATTTGTCAACCAAGTA 58.846 45.455 0.00 0.00 33.75 2.24
3327 3781 3.057526 GGGAGCATTTGTCAACCAAGTAC 60.058 47.826 0.00 0.00 33.75 2.73
3328 3782 3.821033 GGAGCATTTGTCAACCAAGTACT 59.179 43.478 0.00 0.00 33.75 2.73
3329 3783 4.083271 GGAGCATTTGTCAACCAAGTACTC 60.083 45.833 0.00 0.00 33.75 2.59
3330 3784 4.718961 AGCATTTGTCAACCAAGTACTCT 58.281 39.130 0.00 0.00 33.75 3.24
3331 3785 5.865085 AGCATTTGTCAACCAAGTACTCTA 58.135 37.500 0.00 0.00 33.75 2.43
3332 3786 6.296026 AGCATTTGTCAACCAAGTACTCTAA 58.704 36.000 0.00 0.00 33.75 2.10
3333 3787 6.770785 AGCATTTGTCAACCAAGTACTCTAAA 59.229 34.615 0.00 0.00 33.75 1.85
3334 3788 7.284489 AGCATTTGTCAACCAAGTACTCTAAAA 59.716 33.333 0.00 0.00 33.75 1.52
3335 3789 7.918562 GCATTTGTCAACCAAGTACTCTAAAAA 59.081 33.333 0.00 0.00 33.75 1.94
3336 3790 9.965824 CATTTGTCAACCAAGTACTCTAAAAAT 57.034 29.630 0.00 0.00 33.75 1.82
3337 3791 9.965824 ATTTGTCAACCAAGTACTCTAAAAATG 57.034 29.630 0.00 0.00 33.75 2.32
3338 3792 8.740123 TTGTCAACCAAGTACTCTAAAAATGA 57.260 30.769 0.00 0.00 0.00 2.57
3339 3793 8.740123 TGTCAACCAAGTACTCTAAAAATGAA 57.260 30.769 0.00 0.00 0.00 2.57
3340 3794 8.617809 TGTCAACCAAGTACTCTAAAAATGAAC 58.382 33.333 0.00 0.00 0.00 3.18
3341 3795 8.837389 GTCAACCAAGTACTCTAAAAATGAACT 58.163 33.333 0.00 0.00 0.00 3.01
3342 3796 9.052759 TCAACCAAGTACTCTAAAAATGAACTC 57.947 33.333 0.00 0.00 0.00 3.01
3343 3797 8.836413 CAACCAAGTACTCTAAAAATGAACTCA 58.164 33.333 0.00 0.00 0.00 3.41
3344 3798 8.379457 ACCAAGTACTCTAAAAATGAACTCAC 57.621 34.615 0.00 0.00 0.00 3.51
3345 3799 7.990886 ACCAAGTACTCTAAAAATGAACTCACA 59.009 33.333 0.00 0.00 0.00 3.58
3346 3800 9.003658 CCAAGTACTCTAAAAATGAACTCACAT 57.996 33.333 0.00 0.00 0.00 3.21
3349 3803 9.429359 AGTACTCTAAAAATGAACTCACATCTG 57.571 33.333 0.00 0.00 0.00 2.90
3350 3804 7.138692 ACTCTAAAAATGAACTCACATCTGC 57.861 36.000 0.00 0.00 0.00 4.26
3351 3805 6.712095 ACTCTAAAAATGAACTCACATCTGCA 59.288 34.615 0.00 0.00 0.00 4.41
3352 3806 7.392673 ACTCTAAAAATGAACTCACATCTGCAT 59.607 33.333 0.00 0.00 0.00 3.96
3353 3807 8.791327 TCTAAAAATGAACTCACATCTGCATA 57.209 30.769 0.00 0.00 0.00 3.14
3354 3808 9.399797 TCTAAAAATGAACTCACATCTGCATAT 57.600 29.630 0.00 0.00 0.00 1.78
3357 3811 9.793252 AAAAATGAACTCACATCTGCATATTAC 57.207 29.630 0.00 0.00 0.00 1.89
3358 3812 8.510243 AAATGAACTCACATCTGCATATTACA 57.490 30.769 0.00 0.00 0.00 2.41
3359 3813 7.725818 ATGAACTCACATCTGCATATTACAG 57.274 36.000 0.00 0.00 36.44 2.74
3360 3814 6.643388 TGAACTCACATCTGCATATTACAGT 58.357 36.000 0.00 0.00 36.50 3.55
3361 3815 7.105588 TGAACTCACATCTGCATATTACAGTT 58.894 34.615 0.00 0.00 36.50 3.16
3362 3816 8.257306 TGAACTCACATCTGCATATTACAGTTA 58.743 33.333 0.00 0.00 36.50 2.24
3363 3817 9.098355 GAACTCACATCTGCATATTACAGTTAA 57.902 33.333 0.00 0.00 36.50 2.01
3364 3818 9.448438 AACTCACATCTGCATATTACAGTTAAA 57.552 29.630 0.00 0.00 36.50 1.52
3365 3819 9.102757 ACTCACATCTGCATATTACAGTTAAAG 57.897 33.333 0.00 0.56 36.50 1.85
3366 3820 9.317936 CTCACATCTGCATATTACAGTTAAAGA 57.682 33.333 0.00 0.00 36.50 2.52
3367 3821 9.665719 TCACATCTGCATATTACAGTTAAAGAA 57.334 29.630 0.00 0.00 36.50 2.52
3375 3829 9.556030 GCATATTACAGTTAAAGAAAACACTCC 57.444 33.333 0.00 0.00 0.00 3.85
3377 3831 6.607735 TTACAGTTAAAGAAAACACTCCCG 57.392 37.500 0.00 0.00 0.00 5.14
3378 3832 4.520179 ACAGTTAAAGAAAACACTCCCGT 58.480 39.130 0.00 0.00 0.00 5.28
3379 3833 4.945543 ACAGTTAAAGAAAACACTCCCGTT 59.054 37.500 0.00 0.00 0.00 4.44
3380 3834 5.163693 ACAGTTAAAGAAAACACTCCCGTTG 60.164 40.000 0.00 0.00 0.00 4.10
3381 3835 5.065474 CAGTTAAAGAAAACACTCCCGTTGA 59.935 40.000 0.00 0.00 0.00 3.18
3382 3836 5.648960 AGTTAAAGAAAACACTCCCGTTGAA 59.351 36.000 0.00 0.00 0.00 2.69
3383 3837 6.320418 AGTTAAAGAAAACACTCCCGTTGAAT 59.680 34.615 0.00 0.00 0.00 2.57
3384 3838 4.568152 AAGAAAACACTCCCGTTGAATG 57.432 40.909 0.00 0.00 0.00 2.67
3385 3839 3.551846 AGAAAACACTCCCGTTGAATGT 58.448 40.909 0.00 0.00 0.00 2.71
3386 3840 3.315191 AGAAAACACTCCCGTTGAATGTG 59.685 43.478 0.00 0.00 35.09 3.21
3387 3841 2.341846 AACACTCCCGTTGAATGTGT 57.658 45.000 0.00 0.00 42.68 3.72
3388 3842 3.478857 AACACTCCCGTTGAATGTGTA 57.521 42.857 0.00 0.00 40.41 2.90
3389 3843 3.478857 ACACTCCCGTTGAATGTGTAA 57.521 42.857 0.00 0.00 39.65 2.41
3390 3844 3.811083 ACACTCCCGTTGAATGTGTAAA 58.189 40.909 0.00 0.00 39.65 2.01
3391 3845 4.200874 ACACTCCCGTTGAATGTGTAAAA 58.799 39.130 0.00 0.00 39.65 1.52
3392 3846 4.825085 ACACTCCCGTTGAATGTGTAAAAT 59.175 37.500 0.00 0.00 39.65 1.82
3393 3847 5.153513 CACTCCCGTTGAATGTGTAAAATG 58.846 41.667 0.00 0.00 0.00 2.32
3394 3848 4.165779 CTCCCGTTGAATGTGTAAAATGC 58.834 43.478 0.00 0.00 0.00 3.56
3395 3849 2.914214 CCCGTTGAATGTGTAAAATGCG 59.086 45.455 0.00 0.00 0.00 4.73
3396 3850 2.341168 CCGTTGAATGTGTAAAATGCGC 59.659 45.455 0.00 0.00 0.00 6.09
3397 3851 2.976509 CGTTGAATGTGTAAAATGCGCA 59.023 40.909 14.96 14.96 0.00 6.09
3398 3852 3.181554 CGTTGAATGTGTAAAATGCGCAC 60.182 43.478 14.90 0.00 0.00 5.34
3399 3853 3.913548 TGAATGTGTAAAATGCGCACT 57.086 38.095 14.90 0.00 34.52 4.40
3400 3854 3.820689 TGAATGTGTAAAATGCGCACTC 58.179 40.909 14.90 0.38 34.52 3.51
3401 3855 2.919666 ATGTGTAAAATGCGCACTCC 57.080 45.000 14.90 0.00 34.52 3.85
3402 3856 1.598882 TGTGTAAAATGCGCACTCCA 58.401 45.000 14.90 2.10 34.52 3.86
3403 3857 2.158559 TGTGTAAAATGCGCACTCCAT 58.841 42.857 14.90 0.00 34.52 3.41
3404 3858 2.095314 TGTGTAAAATGCGCACTCCATG 60.095 45.455 14.90 0.00 34.52 3.66
3405 3859 1.472082 TGTAAAATGCGCACTCCATGG 59.528 47.619 14.90 4.97 0.00 3.66
3406 3860 1.472480 GTAAAATGCGCACTCCATGGT 59.528 47.619 14.90 0.00 0.00 3.55
3407 3861 0.244450 AAAATGCGCACTCCATGGTG 59.756 50.000 14.90 12.42 39.91 4.17
3413 3867 2.759114 CACTCCATGGTGCCCTGT 59.241 61.111 12.58 0.00 0.00 4.00
3414 3868 1.075482 CACTCCATGGTGCCCTGTT 59.925 57.895 12.58 0.00 0.00 3.16
3415 3869 1.075482 ACTCCATGGTGCCCTGTTG 59.925 57.895 12.58 0.00 0.00 3.33
3416 3870 2.283101 TCCATGGTGCCCTGTTGC 60.283 61.111 12.58 0.00 0.00 4.17
3417 3871 3.384532 CCATGGTGCCCTGTTGCC 61.385 66.667 2.57 0.00 0.00 4.52
3418 3872 2.601067 CATGGTGCCCTGTTGCCA 60.601 61.111 0.00 0.00 35.28 4.92
3419 3873 1.985662 CATGGTGCCCTGTTGCCAT 60.986 57.895 0.00 0.00 41.92 4.40
3420 3874 1.229272 ATGGTGCCCTGTTGCCATT 60.229 52.632 0.00 0.00 38.45 3.16
3421 3875 0.837260 ATGGTGCCCTGTTGCCATTT 60.837 50.000 0.00 0.00 38.45 2.32
3422 3876 1.053264 TGGTGCCCTGTTGCCATTTT 61.053 50.000 0.00 0.00 0.00 1.82
3423 3877 0.108396 GGTGCCCTGTTGCCATTTTT 59.892 50.000 0.00 0.00 0.00 1.94
3499 3953 8.795786 TTTAAGATTGTAAGACACATGTTTGC 57.204 30.769 0.00 0.00 36.90 3.68
3500 3954 6.389830 AAGATTGTAAGACACATGTTTGCA 57.610 33.333 0.00 0.00 36.90 4.08
3501 3955 6.579666 AGATTGTAAGACACATGTTTGCAT 57.420 33.333 0.00 0.00 36.90 3.96
3502 3956 7.686438 AGATTGTAAGACACATGTTTGCATA 57.314 32.000 0.00 0.00 36.90 3.14
3503 3957 8.284945 AGATTGTAAGACACATGTTTGCATAT 57.715 30.769 0.00 0.00 36.90 1.78
3504 3958 8.742777 AGATTGTAAGACACATGTTTGCATATT 58.257 29.630 0.00 0.00 36.90 1.28
3505 3959 8.915871 ATTGTAAGACACATGTTTGCATATTC 57.084 30.769 0.00 0.00 36.90 1.75
3506 3960 6.541969 TGTAAGACACATGTTTGCATATTCG 58.458 36.000 0.00 0.00 33.30 3.34
3507 3961 5.878332 AAGACACATGTTTGCATATTCGA 57.122 34.783 0.00 0.00 33.30 3.71
3508 3962 6.441093 AAGACACATGTTTGCATATTCGAT 57.559 33.333 0.00 0.00 33.30 3.59
3509 3963 6.441093 AGACACATGTTTGCATATTCGATT 57.559 33.333 0.00 0.00 33.30 3.34
3510 3964 6.260377 AGACACATGTTTGCATATTCGATTG 58.740 36.000 0.00 0.00 33.30 2.67
3511 3965 5.342433 ACACATGTTTGCATATTCGATTGG 58.658 37.500 0.00 0.00 33.30 3.16
3512 3966 5.125257 ACACATGTTTGCATATTCGATTGGA 59.875 36.000 0.00 0.00 33.30 3.53
3513 3967 6.035217 CACATGTTTGCATATTCGATTGGAA 58.965 36.000 0.00 0.00 34.22 3.53
3514 3968 6.197655 CACATGTTTGCATATTCGATTGGAAG 59.802 38.462 0.00 0.00 33.58 3.46
3515 3969 4.671377 TGTTTGCATATTCGATTGGAAGC 58.329 39.130 0.00 0.00 38.24 3.86
3516 3970 4.157472 TGTTTGCATATTCGATTGGAAGCA 59.843 37.500 9.07 9.07 38.24 3.91
3517 3971 4.556942 TTGCATATTCGATTGGAAGCAG 57.443 40.909 0.00 0.00 38.24 4.24
3518 3972 3.807553 TGCATATTCGATTGGAAGCAGA 58.192 40.909 0.00 0.00 38.24 4.26
3519 3973 3.811497 TGCATATTCGATTGGAAGCAGAG 59.189 43.478 0.00 0.00 38.24 3.35
3520 3974 3.364764 GCATATTCGATTGGAAGCAGAGC 60.365 47.826 0.00 0.00 38.24 4.09
3521 3975 2.706339 ATTCGATTGGAAGCAGAGCT 57.294 45.000 0.00 0.00 42.56 4.09
3522 3976 1.730501 TTCGATTGGAAGCAGAGCTG 58.269 50.000 0.00 0.00 39.62 4.24
3523 3977 0.897621 TCGATTGGAAGCAGAGCTGA 59.102 50.000 0.85 0.00 39.62 4.26
3524 3978 1.276138 TCGATTGGAAGCAGAGCTGAA 59.724 47.619 0.85 0.00 39.62 3.02
3525 3979 2.079158 CGATTGGAAGCAGAGCTGAAA 58.921 47.619 0.85 0.00 39.62 2.69
3526 3980 2.485426 CGATTGGAAGCAGAGCTGAAAA 59.515 45.455 0.85 0.00 39.62 2.29
3527 3981 3.128242 CGATTGGAAGCAGAGCTGAAAAT 59.872 43.478 0.85 0.00 39.62 1.82
3528 3982 4.333649 CGATTGGAAGCAGAGCTGAAAATA 59.666 41.667 0.85 0.00 39.62 1.40
3529 3983 5.008415 CGATTGGAAGCAGAGCTGAAAATAT 59.992 40.000 0.85 0.00 39.62 1.28
3530 3984 6.203530 CGATTGGAAGCAGAGCTGAAAATATA 59.796 38.462 0.85 0.00 39.62 0.86
3531 3985 6.932356 TTGGAAGCAGAGCTGAAAATATAG 57.068 37.500 0.85 0.00 39.62 1.31
3532 3986 5.371526 TGGAAGCAGAGCTGAAAATATAGG 58.628 41.667 0.85 0.00 39.62 2.57
3533 3987 5.104360 TGGAAGCAGAGCTGAAAATATAGGT 60.104 40.000 0.85 0.00 39.62 3.08
3534 3988 5.825151 GGAAGCAGAGCTGAAAATATAGGTT 59.175 40.000 0.85 0.00 39.62 3.50
3535 3989 6.238593 GGAAGCAGAGCTGAAAATATAGGTTG 60.239 42.308 0.85 0.00 39.62 3.77
3536 3990 4.578105 AGCAGAGCTGAAAATATAGGTTGC 59.422 41.667 0.85 0.00 37.57 4.17
3537 3991 4.578105 GCAGAGCTGAAAATATAGGTTGCT 59.422 41.667 0.85 0.00 31.80 3.91
3538 3992 5.277731 GCAGAGCTGAAAATATAGGTTGCTC 60.278 44.000 0.85 0.00 43.94 4.26
3539 3993 5.238214 CAGAGCTGAAAATATAGGTTGCTCC 59.762 44.000 0.00 0.00 44.46 4.70
3540 3994 4.464947 AGCTGAAAATATAGGTTGCTCCC 58.535 43.478 0.00 0.00 36.75 4.30
3541 3995 3.570125 GCTGAAAATATAGGTTGCTCCCC 59.430 47.826 0.00 0.00 36.75 4.81
3542 3996 4.792068 CTGAAAATATAGGTTGCTCCCCA 58.208 43.478 0.00 0.00 36.75 4.96
3543 3997 4.792068 TGAAAATATAGGTTGCTCCCCAG 58.208 43.478 0.00 0.00 36.75 4.45
3544 3998 4.229582 TGAAAATATAGGTTGCTCCCCAGT 59.770 41.667 0.00 0.00 36.75 4.00
3545 3999 4.439253 AAATATAGGTTGCTCCCCAGTC 57.561 45.455 0.00 0.00 36.75 3.51
3546 4000 1.802553 TATAGGTTGCTCCCCAGTCC 58.197 55.000 0.00 0.00 36.75 3.85
3547 4001 0.988678 ATAGGTTGCTCCCCAGTCCC 60.989 60.000 0.00 0.00 36.75 4.46
3548 4002 4.048470 GGTTGCTCCCCAGTCCCC 62.048 72.222 0.00 0.00 0.00 4.81
3549 4003 3.256960 GTTGCTCCCCAGTCCCCA 61.257 66.667 0.00 0.00 0.00 4.96
3550 4004 2.204291 TTGCTCCCCAGTCCCCAT 60.204 61.111 0.00 0.00 0.00 4.00
3551 4005 1.083895 TTGCTCCCCAGTCCCCATA 59.916 57.895 0.00 0.00 0.00 2.74
3552 4006 0.328450 TTGCTCCCCAGTCCCCATAT 60.328 55.000 0.00 0.00 0.00 1.78
3553 4007 0.768221 TGCTCCCCAGTCCCCATATC 60.768 60.000 0.00 0.00 0.00 1.63
3554 4008 0.768221 GCTCCCCAGTCCCCATATCA 60.768 60.000 0.00 0.00 0.00 2.15
3555 4009 1.819753 CTCCCCAGTCCCCATATCAA 58.180 55.000 0.00 0.00 0.00 2.57
3556 4010 1.421646 CTCCCCAGTCCCCATATCAAC 59.578 57.143 0.00 0.00 0.00 3.18
3557 4011 1.221635 CCCCAGTCCCCATATCAACA 58.778 55.000 0.00 0.00 0.00 3.33
3558 4012 1.782752 CCCCAGTCCCCATATCAACAT 59.217 52.381 0.00 0.00 0.00 2.71
3559 4013 2.177669 CCCCAGTCCCCATATCAACATT 59.822 50.000 0.00 0.00 0.00 2.71
3560 4014 3.374098 CCCCAGTCCCCATATCAACATTT 60.374 47.826 0.00 0.00 0.00 2.32
3561 4015 4.141041 CCCCAGTCCCCATATCAACATTTA 60.141 45.833 0.00 0.00 0.00 1.40
3562 4016 5.454062 CCCAGTCCCCATATCAACATTTAA 58.546 41.667 0.00 0.00 0.00 1.52
3563 4017 6.077322 CCCAGTCCCCATATCAACATTTAAT 58.923 40.000 0.00 0.00 0.00 1.40
3564 4018 6.209391 CCCAGTCCCCATATCAACATTTAATC 59.791 42.308 0.00 0.00 0.00 1.75
3565 4019 7.006509 CCAGTCCCCATATCAACATTTAATCT 58.993 38.462 0.00 0.00 0.00 2.40
3566 4020 7.175641 CCAGTCCCCATATCAACATTTAATCTC 59.824 40.741 0.00 0.00 0.00 2.75
3567 4021 7.720957 CAGTCCCCATATCAACATTTAATCTCA 59.279 37.037 0.00 0.00 0.00 3.27
3568 4022 8.281531 AGTCCCCATATCAACATTTAATCTCAA 58.718 33.333 0.00 0.00 0.00 3.02
3569 4023 8.912988 GTCCCCATATCAACATTTAATCTCAAA 58.087 33.333 0.00 0.00 0.00 2.69
3570 4024 9.659135 TCCCCATATCAACATTTAATCTCAAAT 57.341 29.630 0.00 0.00 0.00 2.32
3582 4036 9.817365 CATTTAATCTCAAATATTGCCTACTCG 57.183 33.333 0.00 0.00 0.00 4.18
3583 4037 9.778741 ATTTAATCTCAAATATTGCCTACTCGA 57.221 29.630 0.00 0.00 0.00 4.04
3584 4038 8.589335 TTAATCTCAAATATTGCCTACTCGAC 57.411 34.615 0.00 0.00 0.00 4.20
3585 4039 5.854010 TCTCAAATATTGCCTACTCGACT 57.146 39.130 0.00 0.00 0.00 4.18
3586 4040 6.954487 TCTCAAATATTGCCTACTCGACTA 57.046 37.500 0.00 0.00 0.00 2.59
3587 4041 6.736123 TCTCAAATATTGCCTACTCGACTAC 58.264 40.000 0.00 0.00 0.00 2.73
3588 4042 6.320418 TCTCAAATATTGCCTACTCGACTACA 59.680 38.462 0.00 0.00 0.00 2.74
3589 4043 7.014326 TCTCAAATATTGCCTACTCGACTACAT 59.986 37.037 0.00 0.00 0.00 2.29
3590 4044 7.497595 TCAAATATTGCCTACTCGACTACATT 58.502 34.615 0.00 0.00 0.00 2.71
3591 4045 8.635328 TCAAATATTGCCTACTCGACTACATTA 58.365 33.333 0.00 0.00 0.00 1.90
3592 4046 9.256477 CAAATATTGCCTACTCGACTACATTAA 57.744 33.333 0.00 0.00 0.00 1.40
3593 4047 9.998106 AAATATTGCCTACTCGACTACATTAAT 57.002 29.630 0.00 0.00 0.00 1.40
3594 4048 9.998106 AATATTGCCTACTCGACTACATTAATT 57.002 29.630 0.00 0.00 0.00 1.40
3595 4049 7.715265 ATTGCCTACTCGACTACATTAATTG 57.285 36.000 0.00 0.00 0.00 2.32
3596 4050 6.459670 TGCCTACTCGACTACATTAATTGA 57.540 37.500 0.00 0.00 0.00 2.57
3597 4051 7.050970 TGCCTACTCGACTACATTAATTGAT 57.949 36.000 0.00 0.00 0.00 2.57
3598 4052 8.173542 TGCCTACTCGACTACATTAATTGATA 57.826 34.615 0.00 0.00 0.00 2.15
3599 4053 8.635328 TGCCTACTCGACTACATTAATTGATAA 58.365 33.333 0.00 0.00 0.00 1.75
3600 4054 9.472361 GCCTACTCGACTACATTAATTGATAAA 57.528 33.333 0.00 0.00 0.00 1.40
3618 4072 9.851686 ATTGATAAATATACAAGAGTCAAGGCA 57.148 29.630 0.00 0.00 0.00 4.75
3619 4073 9.851686 TTGATAAATATACAAGAGTCAAGGCAT 57.148 29.630 0.00 0.00 0.00 4.40
3620 4074 9.494271 TGATAAATATACAAGAGTCAAGGCATC 57.506 33.333 0.00 0.00 0.00 3.91
3621 4075 8.854614 ATAAATATACAAGAGTCAAGGCATCC 57.145 34.615 0.00 0.00 0.00 3.51
3622 4076 6.506538 AATATACAAGAGTCAAGGCATCCT 57.493 37.500 0.00 0.00 33.87 3.24
3623 4077 7.618019 AATATACAAGAGTCAAGGCATCCTA 57.382 36.000 0.00 0.00 31.13 2.94
3624 4078 5.957771 ATACAAGAGTCAAGGCATCCTAA 57.042 39.130 0.00 0.00 31.13 2.69
3625 4079 4.640771 ACAAGAGTCAAGGCATCCTAAA 57.359 40.909 0.00 0.00 31.13 1.85
3626 4080 4.327680 ACAAGAGTCAAGGCATCCTAAAC 58.672 43.478 0.00 0.00 31.13 2.01
3627 4081 4.042187 ACAAGAGTCAAGGCATCCTAAACT 59.958 41.667 0.00 1.20 33.19 2.66
3628 4082 5.248477 ACAAGAGTCAAGGCATCCTAAACTA 59.752 40.000 0.00 0.00 31.47 2.24
3629 4083 6.069963 ACAAGAGTCAAGGCATCCTAAACTAT 60.070 38.462 0.00 0.00 31.47 2.12
3630 4084 5.923204 AGAGTCAAGGCATCCTAAACTATG 58.077 41.667 0.00 0.00 31.47 2.23
3631 4085 4.455606 AGTCAAGGCATCCTAAACTATGC 58.544 43.478 0.00 0.00 46.20 3.14
3664 4118 8.792830 TTATTTTATATAGGAGCATGCTCACC 57.207 34.615 40.37 28.87 44.40 4.02
3665 4119 6.439636 TTTTATATAGGAGCATGCTCACCT 57.560 37.500 40.37 33.10 44.40 4.00
3666 4120 6.439636 TTTATATAGGAGCATGCTCACCTT 57.560 37.500 40.37 26.75 44.40 3.50
3667 4121 7.553504 TTTATATAGGAGCATGCTCACCTTA 57.446 36.000 40.37 27.74 44.40 2.69
3668 4122 7.739995 TTATATAGGAGCATGCTCACCTTAT 57.260 36.000 40.37 30.82 44.40 1.73
3669 4123 8.838649 TTATATAGGAGCATGCTCACCTTATA 57.161 34.615 40.37 31.60 44.40 0.98
3670 4124 7.927683 ATATAGGAGCATGCTCACCTTATAT 57.072 36.000 40.37 32.10 44.40 0.86
3672 4126 5.674052 AGGAGCATGCTCACCTTATATAG 57.326 43.478 40.37 0.00 44.40 1.31
3673 4127 4.081198 AGGAGCATGCTCACCTTATATAGC 60.081 45.833 40.37 22.63 44.40 2.97
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.107204 AGGGGCTGCTATTTCTGTATGG 59.893 50.000 0.00 0.00 0.00 2.74
1 2 3.144506 CAGGGGCTGCTATTTCTGTATG 58.855 50.000 0.00 0.00 0.00 2.39
2 3 3.048600 TCAGGGGCTGCTATTTCTGTAT 58.951 45.455 0.00 0.00 0.00 2.29
3 4 2.477245 TCAGGGGCTGCTATTTCTGTA 58.523 47.619 0.00 0.00 0.00 2.74
4 5 1.289160 TCAGGGGCTGCTATTTCTGT 58.711 50.000 0.00 0.00 0.00 3.41
5 6 2.425143 TTCAGGGGCTGCTATTTCTG 57.575 50.000 0.00 1.27 0.00 3.02
6 7 3.718956 AGTATTCAGGGGCTGCTATTTCT 59.281 43.478 0.00 0.00 0.00 2.52
7 8 3.817647 CAGTATTCAGGGGCTGCTATTTC 59.182 47.826 0.00 0.00 0.00 2.17
8 9 3.203040 ACAGTATTCAGGGGCTGCTATTT 59.797 43.478 0.00 0.00 32.65 1.40
9 10 2.780010 ACAGTATTCAGGGGCTGCTATT 59.220 45.455 0.00 0.00 32.65 1.73
10 11 2.105477 CACAGTATTCAGGGGCTGCTAT 59.895 50.000 0.00 0.00 32.65 2.97
11 12 1.486310 CACAGTATTCAGGGGCTGCTA 59.514 52.381 0.00 0.00 32.65 3.49
12 13 0.254178 CACAGTATTCAGGGGCTGCT 59.746 55.000 0.00 0.00 32.65 4.24
13 14 0.253044 TCACAGTATTCAGGGGCTGC 59.747 55.000 0.00 0.00 32.65 5.25
14 15 2.787473 TTCACAGTATTCAGGGGCTG 57.213 50.000 0.00 0.00 35.31 4.85
15 16 5.450818 TTATTTCACAGTATTCAGGGGCT 57.549 39.130 0.00 0.00 0.00 5.19
16 17 5.885912 TCTTTATTTCACAGTATTCAGGGGC 59.114 40.000 0.00 0.00 0.00 5.80
17 18 9.799106 ATATCTTTATTTCACAGTATTCAGGGG 57.201 33.333 0.00 0.00 0.00 4.79
35 36 9.079833 CCGTCGAAACAGAAAGTTATATCTTTA 57.920 33.333 8.45 0.00 40.26 1.85
36 37 7.601508 ACCGTCGAAACAGAAAGTTATATCTTT 59.398 33.333 8.25 8.25 40.26 2.52
37 38 7.095270 ACCGTCGAAACAGAAAGTTATATCTT 58.905 34.615 0.00 0.00 40.26 2.40
38 39 6.628185 ACCGTCGAAACAGAAAGTTATATCT 58.372 36.000 0.00 0.00 40.26 1.98
39 40 6.882458 ACCGTCGAAACAGAAAGTTATATC 57.118 37.500 0.00 0.00 40.26 1.63
40 41 6.753744 GGTACCGTCGAAACAGAAAGTTATAT 59.246 38.462 0.00 0.00 40.26 0.86
41 42 6.071952 AGGTACCGTCGAAACAGAAAGTTATA 60.072 38.462 6.18 0.00 40.26 0.98
42 43 4.925646 GGTACCGTCGAAACAGAAAGTTAT 59.074 41.667 0.00 0.00 40.26 1.89
43 44 4.037923 AGGTACCGTCGAAACAGAAAGTTA 59.962 41.667 6.18 0.00 40.26 2.24
44 45 3.126073 GGTACCGTCGAAACAGAAAGTT 58.874 45.455 0.00 0.00 43.89 2.66
45 46 2.363359 AGGTACCGTCGAAACAGAAAGT 59.637 45.455 6.18 0.00 0.00 2.66
46 47 3.022607 AGGTACCGTCGAAACAGAAAG 57.977 47.619 6.18 0.00 0.00 2.62
47 48 4.582701 TTAGGTACCGTCGAAACAGAAA 57.417 40.909 6.18 0.00 0.00 2.52
48 49 4.582701 TTTAGGTACCGTCGAAACAGAA 57.417 40.909 6.18 0.00 0.00 3.02
49 50 4.789012 ATTTAGGTACCGTCGAAACAGA 57.211 40.909 6.18 0.00 0.00 3.41
50 51 7.529880 AATTATTTAGGTACCGTCGAAACAG 57.470 36.000 6.18 0.00 0.00 3.16
51 52 7.623925 GCAAATTATTTAGGTACCGTCGAAACA 60.624 37.037 6.18 0.00 0.00 2.83
52 53 6.684131 GCAAATTATTTAGGTACCGTCGAAAC 59.316 38.462 6.18 0.00 0.00 2.78
53 54 6.594937 AGCAAATTATTTAGGTACCGTCGAAA 59.405 34.615 6.18 6.53 0.00 3.46
54 55 6.108015 AGCAAATTATTTAGGTACCGTCGAA 58.892 36.000 6.18 0.53 0.00 3.71
55 56 5.663456 AGCAAATTATTTAGGTACCGTCGA 58.337 37.500 6.18 0.00 0.00 4.20
56 57 5.050567 GGAGCAAATTATTTAGGTACCGTCG 60.051 44.000 6.18 0.00 0.00 5.12
57 58 5.818857 TGGAGCAAATTATTTAGGTACCGTC 59.181 40.000 6.18 0.00 0.00 4.79
58 59 5.587443 GTGGAGCAAATTATTTAGGTACCGT 59.413 40.000 6.18 0.00 0.00 4.83
59 60 5.587043 TGTGGAGCAAATTATTTAGGTACCG 59.413 40.000 6.18 0.00 0.00 4.02
60 61 6.376018 TGTGTGGAGCAAATTATTTAGGTACC 59.624 38.462 2.73 2.73 0.00 3.34
61 62 7.094549 TGTGTGTGGAGCAAATTATTTAGGTAC 60.095 37.037 0.00 0.00 0.00 3.34
62 63 6.943146 TGTGTGTGGAGCAAATTATTTAGGTA 59.057 34.615 0.00 0.00 0.00 3.08
63 64 5.772672 TGTGTGTGGAGCAAATTATTTAGGT 59.227 36.000 0.00 0.00 0.00 3.08
64 65 6.092748 GTGTGTGTGGAGCAAATTATTTAGG 58.907 40.000 0.00 0.00 0.00 2.69
65 66 6.582295 GTGTGTGTGTGGAGCAAATTATTTAG 59.418 38.462 0.00 0.00 0.00 1.85
66 67 6.264292 AGTGTGTGTGTGGAGCAAATTATTTA 59.736 34.615 0.00 0.00 0.00 1.40
67 68 5.068987 AGTGTGTGTGTGGAGCAAATTATTT 59.931 36.000 0.00 0.00 0.00 1.40
68 69 4.584325 AGTGTGTGTGTGGAGCAAATTATT 59.416 37.500 0.00 0.00 0.00 1.40
69 70 4.144297 AGTGTGTGTGTGGAGCAAATTAT 58.856 39.130 0.00 0.00 0.00 1.28
70 71 3.550820 AGTGTGTGTGTGGAGCAAATTA 58.449 40.909 0.00 0.00 0.00 1.40
71 72 2.358898 GAGTGTGTGTGTGGAGCAAATT 59.641 45.455 0.00 0.00 0.00 1.82
72 73 1.949525 GAGTGTGTGTGTGGAGCAAAT 59.050 47.619 0.00 0.00 0.00 2.32
73 74 1.378531 GAGTGTGTGTGTGGAGCAAA 58.621 50.000 0.00 0.00 0.00 3.68
74 75 0.463654 GGAGTGTGTGTGTGGAGCAA 60.464 55.000 0.00 0.00 0.00 3.91
75 76 1.146041 GGAGTGTGTGTGTGGAGCA 59.854 57.895 0.00 0.00 0.00 4.26
76 77 0.179045 AAGGAGTGTGTGTGTGGAGC 60.179 55.000 0.00 0.00 0.00 4.70
77 78 1.942657 CAAAGGAGTGTGTGTGTGGAG 59.057 52.381 0.00 0.00 0.00 3.86
78 79 1.557371 TCAAAGGAGTGTGTGTGTGGA 59.443 47.619 0.00 0.00 0.00 4.02
79 80 1.942657 CTCAAAGGAGTGTGTGTGTGG 59.057 52.381 0.00 0.00 36.36 4.17
95 97 0.306533 GTGCGACGCCTTTTTCTCAA 59.693 50.000 18.69 0.00 0.00 3.02
184 197 2.282110 CATGCCGTGGTGGGTTCA 60.282 61.111 0.00 0.00 38.63 3.18
205 218 0.994247 ATGGTGGTGATCTTGCTCCA 59.006 50.000 0.00 0.00 0.00 3.86
247 263 2.448582 ATTCCCATTCCGCGCCCTA 61.449 57.895 0.00 0.00 0.00 3.53
342 359 2.231529 GTTGGCCTCGCTCTCTCTATA 58.768 52.381 3.32 0.00 0.00 1.31
344 361 1.377366 CGTTGGCCTCGCTCTCTCTA 61.377 60.000 3.32 0.00 0.00 2.43
350 367 1.912371 CTTTTCCGTTGGCCTCGCTC 61.912 60.000 3.32 0.00 0.00 5.03
353 370 0.882927 TGTCTTTTCCGTTGGCCTCG 60.883 55.000 3.32 9.21 0.00 4.63
433 473 3.018149 CTGTACTCCCACACTACTCTCC 58.982 54.545 0.00 0.00 0.00 3.71
435 475 3.181431 ACACTGTACTCCCACACTACTCT 60.181 47.826 0.00 0.00 0.00 3.24
436 476 3.057456 CACACTGTACTCCCACACTACTC 60.057 52.174 0.00 0.00 0.00 2.59
437 477 2.891580 CACACTGTACTCCCACACTACT 59.108 50.000 0.00 0.00 0.00 2.57
438 478 2.889045 TCACACTGTACTCCCACACTAC 59.111 50.000 0.00 0.00 0.00 2.73
439 479 3.232720 TCACACTGTACTCCCACACTA 57.767 47.619 0.00 0.00 0.00 2.74
440 480 2.082140 TCACACTGTACTCCCACACT 57.918 50.000 0.00 0.00 0.00 3.55
598 663 2.273776 GGGGCTGAAGGAAGGAGC 59.726 66.667 0.00 0.00 0.00 4.70
599 664 1.204113 AGTGGGGCTGAAGGAAGGAG 61.204 60.000 0.00 0.00 0.00 3.69
600 665 1.151810 AGTGGGGCTGAAGGAAGGA 60.152 57.895 0.00 0.00 0.00 3.36
601 666 1.204113 AGAGTGGGGCTGAAGGAAGG 61.204 60.000 0.00 0.00 0.00 3.46
679 758 0.246635 TGAGCAAGAACCGAGGTAGC 59.753 55.000 0.00 0.00 0.00 3.58
701 780 1.523938 GAACCATGGAGGCGGCTAC 60.524 63.158 21.47 15.70 43.14 3.58
748 827 1.682323 GCTGGGACTAGTAGTAGCACC 59.318 57.143 15.65 10.76 29.97 5.01
749 828 2.376109 TGCTGGGACTAGTAGTAGCAC 58.624 52.381 18.25 3.67 33.73 4.40
751 830 3.223435 TGATGCTGGGACTAGTAGTAGC 58.777 50.000 14.23 14.23 30.16 3.58
766 845 2.048601 CTCTCCCTGAATCCTGATGCT 58.951 52.381 0.00 0.00 0.00 3.79
769 849 2.975075 CCTCTCTCCCTGAATCCTGAT 58.025 52.381 0.00 0.00 0.00 2.90
780 860 4.779733 TGGGGACGCCTCTCTCCC 62.780 72.222 10.28 0.00 45.17 4.30
929 1054 0.942962 GCCGAATTCCTGATCAGCAG 59.057 55.000 17.76 4.89 44.49 4.24
930 1055 0.252761 TGCCGAATTCCTGATCAGCA 59.747 50.000 17.76 7.55 0.00 4.41
960 1089 0.387202 CCTCGATCGATCAACCAGCT 59.613 55.000 24.40 0.00 0.00 4.24
1195 1327 9.193806 AGAATCAAATAACCAAGAACAGCATAT 57.806 29.630 0.00 0.00 0.00 1.78
1614 1749 4.077184 CGGGTGCCGCAGACCTTA 62.077 66.667 11.22 0.00 41.17 2.69
1706 1841 4.856607 GAGCGCGGAAGACGGAGG 62.857 72.222 8.83 0.00 44.51 4.30
1714 1849 4.393155 AGTGGCATGAGCGCGGAA 62.393 61.111 8.83 0.00 43.41 4.30
1939 2083 3.469970 ATCACGGCCGGCATCTGA 61.470 61.111 31.76 23.45 0.00 3.27
2003 2147 1.376466 GCTCCCTCTTGAGGCACAA 59.624 57.895 11.01 0.00 36.97 3.33
2082 2226 4.172512 CGGCCATCTCCAGCTGCT 62.173 66.667 8.66 0.00 0.00 4.24
2087 2231 4.598894 CTCGCCGGCCATCTCCAG 62.599 72.222 23.46 3.72 0.00 3.86
2122 2266 4.731853 TCCATCCTGGCCGTCCCA 62.732 66.667 0.00 0.00 42.79 4.37
2140 2284 1.664965 GCTCGCGTTGAACTCCTGT 60.665 57.895 5.77 0.00 0.00 4.00
2200 2344 1.445410 CGACGAGGGAAATGACGCA 60.445 57.895 0.00 0.00 0.00 5.24
2254 2413 2.272146 GTGGCCGACATGTGGGAT 59.728 61.111 29.04 0.00 0.00 3.85
2341 2500 1.536073 TACTGCTGAAGGTGCTCGCT 61.536 55.000 0.00 0.00 0.00 4.93
2497 2668 0.381801 CATTACGATTGGCACTGGGC 59.618 55.000 0.00 0.00 43.74 5.36
2587 2758 4.344865 GCCCGCAGACCCAGGAAA 62.345 66.667 0.00 0.00 0.00 3.13
2634 2805 0.883814 CATGCAGGGATCGAAGCCTC 60.884 60.000 7.51 0.00 0.00 4.70
2698 2869 2.707849 CCATGGGTTGCTGCTCTGC 61.708 63.158 2.85 0.00 0.00 4.26
2782 2953 2.927871 GCCGCAGCAAATCATCAAACTT 60.928 45.455 0.00 0.00 39.53 2.66
2785 2956 3.422122 GCCGCAGCAAATCATCAAA 57.578 47.368 0.00 0.00 39.53 2.69
2819 2990 1.369091 GCCGGACGCTTGATGATGTT 61.369 55.000 5.05 0.00 0.00 2.71
2873 3044 5.681437 GCTGAATCCAACTTACTGATCGGTA 60.681 44.000 10.47 10.47 0.00 4.02
2876 3047 3.557595 GGCTGAATCCAACTTACTGATCG 59.442 47.826 0.00 0.00 0.00 3.69
2902 3073 2.842208 TGATTTTGCTTTATCGGCCG 57.158 45.000 22.12 22.12 0.00 6.13
2905 3076 7.594758 TGAAAGAACTTGATTTTGCTTTATCGG 59.405 33.333 0.00 0.00 0.00 4.18
2930 3101 6.592607 AGATAAAATGAGTGGCAAGCAAAATG 59.407 34.615 0.00 0.00 0.00 2.32
2942 3113 7.363268 CCTCCCCAAAAGAAGATAAAATGAGTG 60.363 40.741 0.00 0.00 0.00 3.51
2948 3119 7.245292 TCATTCCTCCCCAAAAGAAGATAAAA 58.755 34.615 0.00 0.00 0.00 1.52
2957 3128 2.025510 AGAGCTCATTCCTCCCCAAAAG 60.026 50.000 17.77 0.00 0.00 2.27
2962 3133 1.207791 TGAAGAGCTCATTCCTCCCC 58.792 55.000 17.77 0.00 0.00 4.81
2963 3134 3.574354 ATTGAAGAGCTCATTCCTCCC 57.426 47.619 17.77 0.00 32.78 4.30
3093 3544 4.678044 CGACATGAGCACTGGTAGTAACAT 60.678 45.833 0.00 0.00 0.00 2.71
3108 3559 8.657074 TTATCTACCCAAATAAACGACATGAG 57.343 34.615 0.00 0.00 0.00 2.90
3122 3573 7.432148 TCTCATAAACTGCTTATCTACCCAA 57.568 36.000 0.00 0.00 0.00 4.12
3165 3619 7.063426 CAGAATCATTCGCTAGTAAACAGAACA 59.937 37.037 0.00 0.00 34.02 3.18
3180 3634 8.381387 CAGTATATCAGCATTCAGAATCATTCG 58.619 37.037 0.00 0.00 34.02 3.34
3185 3639 8.375608 ACAACAGTATATCAGCATTCAGAATC 57.624 34.615 0.00 0.00 0.00 2.52
3186 3640 9.265901 GTACAACAGTATATCAGCATTCAGAAT 57.734 33.333 0.00 0.00 0.00 2.40
3187 3641 7.435192 CGTACAACAGTATATCAGCATTCAGAA 59.565 37.037 0.00 0.00 0.00 3.02
3188 3642 6.918022 CGTACAACAGTATATCAGCATTCAGA 59.082 38.462 0.00 0.00 0.00 3.27
3189 3643 6.918022 TCGTACAACAGTATATCAGCATTCAG 59.082 38.462 0.00 0.00 0.00 3.02
3190 3644 6.695713 GTCGTACAACAGTATATCAGCATTCA 59.304 38.462 0.00 0.00 0.00 2.57
3191 3645 6.129431 CGTCGTACAACAGTATATCAGCATTC 60.129 42.308 0.00 0.00 0.00 2.67
3192 3646 5.685954 CGTCGTACAACAGTATATCAGCATT 59.314 40.000 0.00 0.00 0.00 3.56
3193 3647 5.212934 CGTCGTACAACAGTATATCAGCAT 58.787 41.667 0.00 0.00 0.00 3.79
3194 3648 4.095334 ACGTCGTACAACAGTATATCAGCA 59.905 41.667 0.00 0.00 0.00 4.41
3195 3649 4.595116 ACGTCGTACAACAGTATATCAGC 58.405 43.478 0.00 0.00 0.00 4.26
3196 3650 5.803118 TGACGTCGTACAACAGTATATCAG 58.197 41.667 11.62 0.00 0.00 2.90
3197 3651 5.581874 TCTGACGTCGTACAACAGTATATCA 59.418 40.000 11.62 0.00 0.00 2.15
3198 3652 5.900789 GTCTGACGTCGTACAACAGTATATC 59.099 44.000 11.62 0.00 0.00 1.63
3199 3653 5.583854 AGTCTGACGTCGTACAACAGTATAT 59.416 40.000 18.76 0.00 0.00 0.86
3200 3654 4.931601 AGTCTGACGTCGTACAACAGTATA 59.068 41.667 18.76 0.00 0.00 1.47
3201 3655 3.750130 AGTCTGACGTCGTACAACAGTAT 59.250 43.478 18.76 0.00 0.00 2.12
3202 3656 3.133691 AGTCTGACGTCGTACAACAGTA 58.866 45.455 18.76 0.00 0.00 2.74
3203 3657 1.945394 AGTCTGACGTCGTACAACAGT 59.055 47.619 18.76 0.00 0.00 3.55
3204 3658 2.682952 AGTCTGACGTCGTACAACAG 57.317 50.000 18.76 1.28 0.00 3.16
3205 3659 3.312146 TGTAAGTCTGACGTCGTACAACA 59.688 43.478 18.76 17.77 0.00 3.33
3206 3660 3.877064 TGTAAGTCTGACGTCGTACAAC 58.123 45.455 18.76 16.01 0.00 3.32
3207 3661 4.137849 CTGTAAGTCTGACGTCGTACAA 57.862 45.455 18.76 6.88 30.99 2.41
3208 3662 3.800929 CTGTAAGTCTGACGTCGTACA 57.199 47.619 18.76 15.27 0.00 2.90
3225 3679 9.482175 AGGATTACTCTTGAATAGTCTAACTGT 57.518 33.333 0.00 0.00 0.00 3.55
3237 3691 9.010029 GGTGTTTGAAATAGGATTACTCTTGAA 57.990 33.333 0.00 0.00 0.00 2.69
3238 3692 8.160765 TGGTGTTTGAAATAGGATTACTCTTGA 58.839 33.333 0.00 0.00 0.00 3.02
3239 3693 8.335532 TGGTGTTTGAAATAGGATTACTCTTG 57.664 34.615 0.00 0.00 0.00 3.02
3240 3694 8.960591 CATGGTGTTTGAAATAGGATTACTCTT 58.039 33.333 0.00 0.00 0.00 2.85
3241 3695 8.109634 ACATGGTGTTTGAAATAGGATTACTCT 58.890 33.333 0.00 0.00 0.00 3.24
3242 3696 8.184192 CACATGGTGTTTGAAATAGGATTACTC 58.816 37.037 0.00 0.00 0.00 2.59
3243 3697 7.669722 ACACATGGTGTTTGAAATAGGATTACT 59.330 33.333 0.00 0.00 45.08 2.24
3244 3698 7.826690 ACACATGGTGTTTGAAATAGGATTAC 58.173 34.615 0.00 0.00 45.08 1.89
3245 3699 8.952278 GTACACATGGTGTTTGAAATAGGATTA 58.048 33.333 7.37 0.00 45.08 1.75
3246 3700 6.916360 ACACATGGTGTTTGAAATAGGATT 57.084 33.333 0.00 0.00 45.08 3.01
3247 3701 7.121168 CAGTACACATGGTGTTTGAAATAGGAT 59.879 37.037 7.37 0.00 45.08 3.24
3248 3702 6.429692 CAGTACACATGGTGTTTGAAATAGGA 59.570 38.462 7.37 0.00 45.08 2.94
3249 3703 6.206634 ACAGTACACATGGTGTTTGAAATAGG 59.793 38.462 7.37 0.00 45.08 2.57
3250 3704 7.202016 ACAGTACACATGGTGTTTGAAATAG 57.798 36.000 7.37 0.00 45.08 1.73
3251 3705 7.575414 AACAGTACACATGGTGTTTGAAATA 57.425 32.000 7.37 0.00 45.08 1.40
3252 3706 6.463995 AACAGTACACATGGTGTTTGAAAT 57.536 33.333 7.37 0.00 45.08 2.17
3253 3707 5.906113 AACAGTACACATGGTGTTTGAAA 57.094 34.783 7.37 0.00 45.08 2.69
3254 3708 7.421599 CATTAACAGTACACATGGTGTTTGAA 58.578 34.615 7.37 0.41 45.08 2.69
3255 3709 6.514212 GCATTAACAGTACACATGGTGTTTGA 60.514 38.462 7.37 0.00 45.08 2.69
3256 3710 5.629020 GCATTAACAGTACACATGGTGTTTG 59.371 40.000 7.37 9.18 45.08 2.93
3257 3711 5.300539 TGCATTAACAGTACACATGGTGTTT 59.699 36.000 7.37 0.00 45.08 2.83
3258 3712 4.824537 TGCATTAACAGTACACATGGTGTT 59.175 37.500 7.37 0.00 45.08 3.32
3260 3714 5.106197 ACATGCATTAACAGTACACATGGTG 60.106 40.000 0.00 0.00 38.14 4.17
3261 3715 5.009631 ACATGCATTAACAGTACACATGGT 58.990 37.500 0.00 0.00 38.14 3.55
3262 3716 5.123661 TGACATGCATTAACAGTACACATGG 59.876 40.000 0.00 0.00 38.14 3.66
3263 3717 6.180771 TGACATGCATTAACAGTACACATG 57.819 37.500 0.00 0.00 39.38 3.21
3264 3718 8.504812 TTATGACATGCATTAACAGTACACAT 57.495 30.769 0.00 0.00 38.44 3.21
3265 3719 7.913674 TTATGACATGCATTAACAGTACACA 57.086 32.000 0.00 0.00 38.44 3.72
3266 3720 9.619316 TTTTTATGACATGCATTAACAGTACAC 57.381 29.630 0.00 0.00 38.44 2.90
3290 3744 8.374743 ACAAATGCTCCCAAATGTAGTATTTTT 58.625 29.630 0.00 0.00 34.60 1.94
3291 3745 7.906327 ACAAATGCTCCCAAATGTAGTATTTT 58.094 30.769 0.00 0.00 34.60 1.82
3292 3746 7.178274 TGACAAATGCTCCCAAATGTAGTATTT 59.822 33.333 0.00 0.00 36.41 1.40
3293 3747 6.663093 TGACAAATGCTCCCAAATGTAGTATT 59.337 34.615 0.00 0.00 0.00 1.89
3294 3748 6.186957 TGACAAATGCTCCCAAATGTAGTAT 58.813 36.000 0.00 0.00 0.00 2.12
3295 3749 5.565509 TGACAAATGCTCCCAAATGTAGTA 58.434 37.500 0.00 0.00 0.00 1.82
3296 3750 4.406456 TGACAAATGCTCCCAAATGTAGT 58.594 39.130 0.00 0.00 0.00 2.73
3297 3751 5.163513 GTTGACAAATGCTCCCAAATGTAG 58.836 41.667 0.00 0.00 0.00 2.74
3298 3752 4.021544 GGTTGACAAATGCTCCCAAATGTA 60.022 41.667 0.00 0.00 0.00 2.29
3299 3753 3.244181 GGTTGACAAATGCTCCCAAATGT 60.244 43.478 0.00 0.00 0.00 2.71
3300 3754 3.244146 TGGTTGACAAATGCTCCCAAATG 60.244 43.478 0.00 0.00 0.00 2.32
3301 3755 2.971330 TGGTTGACAAATGCTCCCAAAT 59.029 40.909 0.00 0.00 0.00 2.32
3302 3756 2.392662 TGGTTGACAAATGCTCCCAAA 58.607 42.857 0.00 0.00 0.00 3.28
3303 3757 2.079170 TGGTTGACAAATGCTCCCAA 57.921 45.000 0.00 0.00 0.00 4.12
3304 3758 1.962807 CTTGGTTGACAAATGCTCCCA 59.037 47.619 0.00 0.00 38.91 4.37
3305 3759 1.963515 ACTTGGTTGACAAATGCTCCC 59.036 47.619 0.00 0.00 38.91 4.30
3306 3760 3.821033 AGTACTTGGTTGACAAATGCTCC 59.179 43.478 0.00 0.00 38.91 4.70
3307 3761 4.757149 AGAGTACTTGGTTGACAAATGCTC 59.243 41.667 0.00 0.00 44.77 4.26
3308 3762 4.718961 AGAGTACTTGGTTGACAAATGCT 58.281 39.130 0.00 0.00 38.91 3.79
3309 3763 6.554334 TTAGAGTACTTGGTTGACAAATGC 57.446 37.500 0.00 0.00 38.91 3.56
3310 3764 9.965824 ATTTTTAGAGTACTTGGTTGACAAATG 57.034 29.630 0.00 0.00 38.91 2.32
3311 3765 9.965824 CATTTTTAGAGTACTTGGTTGACAAAT 57.034 29.630 0.00 0.00 38.91 2.32
3312 3766 9.179909 TCATTTTTAGAGTACTTGGTTGACAAA 57.820 29.630 0.00 0.00 38.91 2.83
3313 3767 8.740123 TCATTTTTAGAGTACTTGGTTGACAA 57.260 30.769 0.00 0.00 37.55 3.18
3314 3768 8.617809 GTTCATTTTTAGAGTACTTGGTTGACA 58.382 33.333 0.00 0.00 0.00 3.58
3315 3769 8.837389 AGTTCATTTTTAGAGTACTTGGTTGAC 58.163 33.333 0.00 0.00 0.00 3.18
3316 3770 8.974060 AGTTCATTTTTAGAGTACTTGGTTGA 57.026 30.769 0.00 0.00 0.00 3.18
3317 3771 8.836413 TGAGTTCATTTTTAGAGTACTTGGTTG 58.164 33.333 0.00 0.00 0.00 3.77
3318 3772 8.837389 GTGAGTTCATTTTTAGAGTACTTGGTT 58.163 33.333 0.00 0.00 0.00 3.67
3319 3773 7.990886 TGTGAGTTCATTTTTAGAGTACTTGGT 59.009 33.333 0.00 0.00 0.00 3.67
3320 3774 8.378172 TGTGAGTTCATTTTTAGAGTACTTGG 57.622 34.615 0.00 0.00 0.00 3.61
3323 3777 9.429359 CAGATGTGAGTTCATTTTTAGAGTACT 57.571 33.333 0.00 0.00 0.00 2.73
3324 3778 8.171840 GCAGATGTGAGTTCATTTTTAGAGTAC 58.828 37.037 0.00 0.00 0.00 2.73
3325 3779 7.877612 TGCAGATGTGAGTTCATTTTTAGAGTA 59.122 33.333 0.00 0.00 0.00 2.59
3326 3780 6.712095 TGCAGATGTGAGTTCATTTTTAGAGT 59.288 34.615 0.00 0.00 0.00 3.24
3327 3781 7.137490 TGCAGATGTGAGTTCATTTTTAGAG 57.863 36.000 0.00 0.00 0.00 2.43
3328 3782 7.692460 ATGCAGATGTGAGTTCATTTTTAGA 57.308 32.000 0.00 0.00 0.00 2.10
3331 3785 9.793252 GTAATATGCAGATGTGAGTTCATTTTT 57.207 29.630 0.00 0.00 0.00 1.94
3332 3786 8.959548 TGTAATATGCAGATGTGAGTTCATTTT 58.040 29.630 0.00 0.00 0.00 1.82
3333 3787 8.510243 TGTAATATGCAGATGTGAGTTCATTT 57.490 30.769 0.00 0.00 0.00 2.32
3334 3788 7.772292 ACTGTAATATGCAGATGTGAGTTCATT 59.228 33.333 12.74 0.00 37.40 2.57
3335 3789 7.278135 ACTGTAATATGCAGATGTGAGTTCAT 58.722 34.615 12.74 0.00 37.40 2.57
3336 3790 6.643388 ACTGTAATATGCAGATGTGAGTTCA 58.357 36.000 12.74 0.00 37.40 3.18
3337 3791 7.545362 AACTGTAATATGCAGATGTGAGTTC 57.455 36.000 12.74 0.00 37.40 3.01
3338 3792 9.448438 TTTAACTGTAATATGCAGATGTGAGTT 57.552 29.630 12.74 13.49 37.40 3.01
3339 3793 9.102757 CTTTAACTGTAATATGCAGATGTGAGT 57.897 33.333 12.74 0.00 37.40 3.41
3340 3794 9.317936 TCTTTAACTGTAATATGCAGATGTGAG 57.682 33.333 12.74 0.00 37.40 3.51
3341 3795 9.665719 TTCTTTAACTGTAATATGCAGATGTGA 57.334 29.630 12.74 4.06 37.40 3.58
3349 3803 9.556030 GGAGTGTTTTCTTTAACTGTAATATGC 57.444 33.333 0.00 0.00 0.00 3.14
3351 3805 8.943002 CGGGAGTGTTTTCTTTAACTGTAATAT 58.057 33.333 0.00 0.00 0.00 1.28
3352 3806 7.933033 ACGGGAGTGTTTTCTTTAACTGTAATA 59.067 33.333 0.00 0.00 44.82 0.98
3353 3807 6.769341 ACGGGAGTGTTTTCTTTAACTGTAAT 59.231 34.615 0.00 0.00 44.82 1.89
3354 3808 6.114767 ACGGGAGTGTTTTCTTTAACTGTAA 58.885 36.000 0.00 0.00 44.82 2.41
3355 3809 5.673514 ACGGGAGTGTTTTCTTTAACTGTA 58.326 37.500 0.00 0.00 44.82 2.74
3356 3810 4.520179 ACGGGAGTGTTTTCTTTAACTGT 58.480 39.130 0.00 0.00 44.82 3.55
3357 3811 5.065474 TCAACGGGAGTGTTTTCTTTAACTG 59.935 40.000 0.00 0.00 46.69 3.16
3358 3812 5.187687 TCAACGGGAGTGTTTTCTTTAACT 58.812 37.500 0.00 0.00 46.69 2.24
3359 3813 5.488645 TCAACGGGAGTGTTTTCTTTAAC 57.511 39.130 0.00 0.00 46.69 2.01
3360 3814 6.095720 ACATTCAACGGGAGTGTTTTCTTTAA 59.904 34.615 2.40 0.00 43.15 1.52
3361 3815 5.591067 ACATTCAACGGGAGTGTTTTCTTTA 59.409 36.000 2.40 0.00 43.15 1.85
3362 3816 4.401202 ACATTCAACGGGAGTGTTTTCTTT 59.599 37.500 2.40 0.00 43.15 2.52
3363 3817 3.951680 ACATTCAACGGGAGTGTTTTCTT 59.048 39.130 2.40 0.00 43.15 2.52
3364 3818 3.315191 CACATTCAACGGGAGTGTTTTCT 59.685 43.478 5.05 0.00 43.15 2.52
3365 3819 3.066203 ACACATTCAACGGGAGTGTTTTC 59.934 43.478 5.05 0.00 43.15 2.29
3366 3820 3.020984 ACACATTCAACGGGAGTGTTTT 58.979 40.909 5.05 0.00 43.15 2.43
3367 3821 2.650322 ACACATTCAACGGGAGTGTTT 58.350 42.857 5.05 0.00 43.15 2.83
3368 3822 2.341846 ACACATTCAACGGGAGTGTT 57.658 45.000 5.05 0.00 43.15 3.32
3369 3823 3.478857 TTACACATTCAACGGGAGTGT 57.521 42.857 0.00 0.00 46.21 3.55
3370 3824 4.822036 TTTTACACATTCAACGGGAGTG 57.178 40.909 0.00 0.00 46.69 3.51
3372 3826 4.165779 GCATTTTACACATTCAACGGGAG 58.834 43.478 0.00 0.00 0.00 4.30
3373 3827 3.365465 CGCATTTTACACATTCAACGGGA 60.365 43.478 0.00 0.00 0.00 5.14
3374 3828 2.914214 CGCATTTTACACATTCAACGGG 59.086 45.455 0.00 0.00 0.00 5.28
3375 3829 2.341168 GCGCATTTTACACATTCAACGG 59.659 45.455 0.30 0.00 0.00 4.44
3376 3830 2.976509 TGCGCATTTTACACATTCAACG 59.023 40.909 5.66 0.00 0.00 4.10
3377 3831 3.980775 AGTGCGCATTTTACACATTCAAC 59.019 39.130 15.91 0.00 36.76 3.18
3378 3832 4.225984 GAGTGCGCATTTTACACATTCAA 58.774 39.130 15.91 0.00 36.76 2.69
3379 3833 3.365868 GGAGTGCGCATTTTACACATTCA 60.366 43.478 15.91 0.00 36.76 2.57
3380 3834 3.171277 GGAGTGCGCATTTTACACATTC 58.829 45.455 15.91 0.00 36.76 2.67
3381 3835 2.556189 TGGAGTGCGCATTTTACACATT 59.444 40.909 15.91 0.00 36.76 2.71
3382 3836 2.158559 TGGAGTGCGCATTTTACACAT 58.841 42.857 15.91 0.00 36.76 3.21
3383 3837 1.598882 TGGAGTGCGCATTTTACACA 58.401 45.000 15.91 3.45 36.76 3.72
3384 3838 2.518949 CATGGAGTGCGCATTTTACAC 58.481 47.619 15.91 0.00 34.48 2.90
3385 3839 1.472082 CCATGGAGTGCGCATTTTACA 59.528 47.619 15.91 10.35 0.00 2.41
3386 3840 1.472480 ACCATGGAGTGCGCATTTTAC 59.528 47.619 21.47 3.79 0.00 2.01
3387 3841 1.472082 CACCATGGAGTGCGCATTTTA 59.528 47.619 21.47 2.49 0.00 1.52
3388 3842 0.244450 CACCATGGAGTGCGCATTTT 59.756 50.000 21.47 1.72 0.00 1.82
3389 3843 1.885157 CACCATGGAGTGCGCATTT 59.115 52.632 21.47 4.92 0.00 2.32
3390 3844 3.594568 CACCATGGAGTGCGCATT 58.405 55.556 21.47 10.23 0.00 3.56
3421 3875 9.725019 TTTAGATGCTCTGATGAACTCTAAAAA 57.275 29.630 0.00 0.00 33.28 1.94
3422 3876 9.155975 GTTTAGATGCTCTGATGAACTCTAAAA 57.844 33.333 0.00 0.00 36.22 1.52
3423 3877 8.535335 AGTTTAGATGCTCTGATGAACTCTAAA 58.465 33.333 0.00 0.00 33.61 1.85
3424 3878 8.072321 AGTTTAGATGCTCTGATGAACTCTAA 57.928 34.615 0.00 0.00 0.00 2.10
3425 3879 7.652524 AGTTTAGATGCTCTGATGAACTCTA 57.347 36.000 0.00 0.00 0.00 2.43
3426 3880 6.543430 AGTTTAGATGCTCTGATGAACTCT 57.457 37.500 0.00 0.00 0.00 3.24
3427 3881 7.608308 AAAGTTTAGATGCTCTGATGAACTC 57.392 36.000 0.00 0.00 0.00 3.01
3428 3882 7.992754 AAAAGTTTAGATGCTCTGATGAACT 57.007 32.000 0.00 0.00 0.00 3.01
3473 3927 9.410556 GCAAACATGTGTCTTACAATCTTAAAT 57.589 29.630 0.00 0.00 43.77 1.40
3474 3928 8.409371 TGCAAACATGTGTCTTACAATCTTAAA 58.591 29.630 0.00 0.00 43.77 1.52
3475 3929 7.935520 TGCAAACATGTGTCTTACAATCTTAA 58.064 30.769 0.00 0.00 43.77 1.85
3476 3930 7.503521 TGCAAACATGTGTCTTACAATCTTA 57.496 32.000 0.00 0.00 43.77 2.10
3477 3931 6.389830 TGCAAACATGTGTCTTACAATCTT 57.610 33.333 0.00 0.00 43.77 2.40
3478 3932 6.579666 ATGCAAACATGTGTCTTACAATCT 57.420 33.333 0.00 0.00 43.77 2.40
3479 3933 8.915871 AATATGCAAACATGTGTCTTACAATC 57.084 30.769 0.00 0.00 43.77 2.67
3480 3934 7.697710 CGAATATGCAAACATGTGTCTTACAAT 59.302 33.333 0.00 0.00 43.77 2.71
3481 3935 7.020602 CGAATATGCAAACATGTGTCTTACAA 58.979 34.615 0.00 0.00 43.77 2.41
3482 3936 6.370166 TCGAATATGCAAACATGTGTCTTACA 59.630 34.615 0.00 0.00 44.87 2.41
3483 3937 6.771076 TCGAATATGCAAACATGTGTCTTAC 58.229 36.000 0.00 0.00 37.04 2.34
3484 3938 6.976636 TCGAATATGCAAACATGTGTCTTA 57.023 33.333 0.00 0.00 37.04 2.10
3485 3939 5.878332 TCGAATATGCAAACATGTGTCTT 57.122 34.783 0.00 0.00 37.04 3.01
3486 3940 6.260377 CAATCGAATATGCAAACATGTGTCT 58.740 36.000 0.00 0.00 37.04 3.41
3487 3941 5.456497 CCAATCGAATATGCAAACATGTGTC 59.544 40.000 0.00 0.00 37.04 3.67
3488 3942 5.125257 TCCAATCGAATATGCAAACATGTGT 59.875 36.000 0.00 0.00 37.04 3.72
3489 3943 5.580661 TCCAATCGAATATGCAAACATGTG 58.419 37.500 0.00 0.00 37.04 3.21
3490 3944 5.833406 TCCAATCGAATATGCAAACATGT 57.167 34.783 0.00 0.00 37.04 3.21
3491 3945 5.174398 GCTTCCAATCGAATATGCAAACATG 59.826 40.000 0.00 0.00 37.04 3.21
3492 3946 5.163530 TGCTTCCAATCGAATATGCAAACAT 60.164 36.000 0.00 0.00 40.49 2.71
3493 3947 4.157472 TGCTTCCAATCGAATATGCAAACA 59.843 37.500 0.00 0.00 29.10 2.83
3494 3948 4.671377 TGCTTCCAATCGAATATGCAAAC 58.329 39.130 0.00 0.00 29.10 2.93
3495 3949 4.639755 TCTGCTTCCAATCGAATATGCAAA 59.360 37.500 0.00 0.00 31.12 3.68
3496 3950 4.198530 TCTGCTTCCAATCGAATATGCAA 58.801 39.130 0.00 0.00 31.12 4.08
3497 3951 3.807553 TCTGCTTCCAATCGAATATGCA 58.192 40.909 0.00 0.00 30.82 3.96
3498 3952 3.364764 GCTCTGCTTCCAATCGAATATGC 60.365 47.826 0.00 0.00 0.00 3.14
3499 3953 4.063689 AGCTCTGCTTCCAATCGAATATG 58.936 43.478 0.00 0.00 33.89 1.78
3500 3954 4.063689 CAGCTCTGCTTCCAATCGAATAT 58.936 43.478 0.00 0.00 36.40 1.28
3501 3955 3.132824 TCAGCTCTGCTTCCAATCGAATA 59.867 43.478 0.00 0.00 36.40 1.75
3502 3956 2.093288 TCAGCTCTGCTTCCAATCGAAT 60.093 45.455 0.00 0.00 36.40 3.34
3503 3957 1.276138 TCAGCTCTGCTTCCAATCGAA 59.724 47.619 0.00 0.00 36.40 3.71
3504 3958 0.897621 TCAGCTCTGCTTCCAATCGA 59.102 50.000 0.00 0.00 36.40 3.59
3505 3959 1.730501 TTCAGCTCTGCTTCCAATCG 58.269 50.000 0.00 0.00 36.40 3.34
3506 3960 4.715527 ATTTTCAGCTCTGCTTCCAATC 57.284 40.909 0.00 0.00 36.40 2.67
3507 3961 6.489361 CCTATATTTTCAGCTCTGCTTCCAAT 59.511 38.462 0.00 0.00 36.40 3.16
3508 3962 5.824624 CCTATATTTTCAGCTCTGCTTCCAA 59.175 40.000 0.00 0.00 36.40 3.53
3509 3963 5.104360 ACCTATATTTTCAGCTCTGCTTCCA 60.104 40.000 0.00 0.00 36.40 3.53
3510 3964 5.372373 ACCTATATTTTCAGCTCTGCTTCC 58.628 41.667 0.00 0.00 36.40 3.46
3511 3965 6.723282 CAACCTATATTTTCAGCTCTGCTTC 58.277 40.000 0.00 0.00 36.40 3.86
3512 3966 5.067023 GCAACCTATATTTTCAGCTCTGCTT 59.933 40.000 0.00 0.00 36.40 3.91
3513 3967 4.578105 GCAACCTATATTTTCAGCTCTGCT 59.422 41.667 0.00 0.00 40.77 4.24
3514 3968 4.578105 AGCAACCTATATTTTCAGCTCTGC 59.422 41.667 0.00 0.00 0.00 4.26
3515 3969 5.238214 GGAGCAACCTATATTTTCAGCTCTG 59.762 44.000 10.41 0.00 44.77 3.35
3516 3970 5.372373 GGAGCAACCTATATTTTCAGCTCT 58.628 41.667 10.41 0.00 44.77 4.09
3517 3971 4.517075 GGGAGCAACCTATATTTTCAGCTC 59.483 45.833 0.00 0.00 44.69 4.09
3518 3972 4.464947 GGGAGCAACCTATATTTTCAGCT 58.535 43.478 0.00 0.00 38.98 4.24
3519 3973 3.570125 GGGGAGCAACCTATATTTTCAGC 59.430 47.826 0.29 0.00 38.98 4.26
3520 3974 4.792068 TGGGGAGCAACCTATATTTTCAG 58.208 43.478 0.29 0.00 38.98 3.02
3521 3975 4.229582 ACTGGGGAGCAACCTATATTTTCA 59.770 41.667 0.29 0.00 38.98 2.69
3522 3976 4.793201 ACTGGGGAGCAACCTATATTTTC 58.207 43.478 0.29 0.00 38.98 2.29
3523 3977 4.386424 GGACTGGGGAGCAACCTATATTTT 60.386 45.833 0.29 0.00 38.98 1.82
3524 3978 3.138468 GGACTGGGGAGCAACCTATATTT 59.862 47.826 0.29 0.00 38.98 1.40
3525 3979 2.711547 GGACTGGGGAGCAACCTATATT 59.288 50.000 0.29 0.00 38.98 1.28
3526 3980 2.339769 GGACTGGGGAGCAACCTATAT 58.660 52.381 0.29 0.00 38.98 0.86
3527 3981 1.694693 GGGACTGGGGAGCAACCTATA 60.695 57.143 0.29 0.00 38.98 1.31
3528 3982 0.988678 GGGACTGGGGAGCAACCTAT 60.989 60.000 0.29 0.00 38.98 2.57
3529 3983 1.615424 GGGACTGGGGAGCAACCTA 60.615 63.158 0.29 0.00 38.98 3.08
3530 3984 2.936032 GGGACTGGGGAGCAACCT 60.936 66.667 0.29 0.00 38.98 3.50
3531 3985 4.048470 GGGGACTGGGGAGCAACC 62.048 72.222 0.00 0.00 38.08 3.77
3532 3986 1.279025 TATGGGGACTGGGGAGCAAC 61.279 60.000 0.00 0.00 0.00 4.17
3533 3987 0.328450 ATATGGGGACTGGGGAGCAA 60.328 55.000 0.00 0.00 0.00 3.91
3534 3988 0.768221 GATATGGGGACTGGGGAGCA 60.768 60.000 0.00 0.00 0.00 4.26
3535 3989 0.768221 TGATATGGGGACTGGGGAGC 60.768 60.000 0.00 0.00 0.00 4.70
3536 3990 1.421646 GTTGATATGGGGACTGGGGAG 59.578 57.143 0.00 0.00 0.00 4.30
3537 3991 1.274708 TGTTGATATGGGGACTGGGGA 60.275 52.381 0.00 0.00 0.00 4.81
3538 3992 1.221635 TGTTGATATGGGGACTGGGG 58.778 55.000 0.00 0.00 0.00 4.96
3539 3993 3.600448 AATGTTGATATGGGGACTGGG 57.400 47.619 0.00 0.00 0.00 4.45
3540 3994 7.006509 AGATTAAATGTTGATATGGGGACTGG 58.993 38.462 0.00 0.00 0.00 4.00
3541 3995 7.720957 TGAGATTAAATGTTGATATGGGGACTG 59.279 37.037 0.00 0.00 0.00 3.51
3542 3996 7.815383 TGAGATTAAATGTTGATATGGGGACT 58.185 34.615 0.00 0.00 0.00 3.85
3543 3997 8.463930 TTGAGATTAAATGTTGATATGGGGAC 57.536 34.615 0.00 0.00 0.00 4.46
3544 3998 9.659135 ATTTGAGATTAAATGTTGATATGGGGA 57.341 29.630 0.00 0.00 0.00 4.81
3556 4010 9.817365 CGAGTAGGCAATATTTGAGATTAAATG 57.183 33.333 0.00 0.00 32.79 2.32
3557 4011 9.778741 TCGAGTAGGCAATATTTGAGATTAAAT 57.221 29.630 0.00 0.00 34.78 1.40
3558 4012 9.042008 GTCGAGTAGGCAATATTTGAGATTAAA 57.958 33.333 0.00 0.00 0.00 1.52
3559 4013 8.421784 AGTCGAGTAGGCAATATTTGAGATTAA 58.578 33.333 0.00 0.00 0.00 1.40
3560 4014 7.952671 AGTCGAGTAGGCAATATTTGAGATTA 58.047 34.615 0.00 0.00 0.00 1.75
3561 4015 6.821388 AGTCGAGTAGGCAATATTTGAGATT 58.179 36.000 0.00 0.00 0.00 2.40
3562 4016 6.412362 AGTCGAGTAGGCAATATTTGAGAT 57.588 37.500 0.00 0.00 0.00 2.75
3563 4017 5.854010 AGTCGAGTAGGCAATATTTGAGA 57.146 39.130 0.00 0.00 0.00 3.27
3564 4018 6.504398 TGTAGTCGAGTAGGCAATATTTGAG 58.496 40.000 0.00 0.00 0.00 3.02
3565 4019 6.459670 TGTAGTCGAGTAGGCAATATTTGA 57.540 37.500 0.00 0.00 0.00 2.69
3566 4020 7.715265 AATGTAGTCGAGTAGGCAATATTTG 57.285 36.000 0.00 0.00 0.00 2.32
3567 4021 9.998106 ATTAATGTAGTCGAGTAGGCAATATTT 57.002 29.630 0.00 0.00 0.00 1.40
3568 4022 9.998106 AATTAATGTAGTCGAGTAGGCAATATT 57.002 29.630 0.00 0.00 0.00 1.28
3569 4023 9.424319 CAATTAATGTAGTCGAGTAGGCAATAT 57.576 33.333 0.00 0.00 0.00 1.28
3570 4024 8.635328 TCAATTAATGTAGTCGAGTAGGCAATA 58.365 33.333 0.00 0.00 0.00 1.90
3571 4025 7.497595 TCAATTAATGTAGTCGAGTAGGCAAT 58.502 34.615 0.00 0.00 0.00 3.56
3572 4026 6.869695 TCAATTAATGTAGTCGAGTAGGCAA 58.130 36.000 0.00 0.00 0.00 4.52
3573 4027 6.459670 TCAATTAATGTAGTCGAGTAGGCA 57.540 37.500 0.00 0.00 0.00 4.75
3574 4028 9.472361 TTTATCAATTAATGTAGTCGAGTAGGC 57.528 33.333 0.00 0.00 0.00 3.93
3592 4046 9.851686 TGCCTTGACTCTTGTATATTTATCAAT 57.148 29.630 0.00 0.00 0.00 2.57
3593 4047 9.851686 ATGCCTTGACTCTTGTATATTTATCAA 57.148 29.630 0.00 0.00 0.00 2.57
3594 4048 9.494271 GATGCCTTGACTCTTGTATATTTATCA 57.506 33.333 0.00 0.00 0.00 2.15
3595 4049 8.940952 GGATGCCTTGACTCTTGTATATTTATC 58.059 37.037 0.00 0.00 0.00 1.75
3596 4050 8.664079 AGGATGCCTTGACTCTTGTATATTTAT 58.336 33.333 0.00 0.00 0.00 1.40
3597 4051 8.034313 AGGATGCCTTGACTCTTGTATATTTA 57.966 34.615 0.00 0.00 0.00 1.40
3598 4052 6.904626 AGGATGCCTTGACTCTTGTATATTT 58.095 36.000 0.00 0.00 0.00 1.40
3599 4053 6.506538 AGGATGCCTTGACTCTTGTATATT 57.493 37.500 0.00 0.00 0.00 1.28
3600 4054 7.618019 TTAGGATGCCTTGACTCTTGTATAT 57.382 36.000 0.00 0.00 34.61 0.86
3601 4055 7.125811 AGTTTAGGATGCCTTGACTCTTGTATA 59.874 37.037 0.00 0.00 34.61 1.47
3602 4056 5.957771 TTAGGATGCCTTGACTCTTGTAT 57.042 39.130 0.00 0.00 34.61 2.29
3603 4057 5.248477 AGTTTAGGATGCCTTGACTCTTGTA 59.752 40.000 0.00 0.00 34.61 2.41
3604 4058 4.042187 AGTTTAGGATGCCTTGACTCTTGT 59.958 41.667 0.00 0.00 34.61 3.16
3605 4059 4.583871 AGTTTAGGATGCCTTGACTCTTG 58.416 43.478 0.00 0.00 34.61 3.02
3606 4060 4.917906 AGTTTAGGATGCCTTGACTCTT 57.082 40.909 0.00 0.00 34.61 2.85
3607 4061 5.686124 GCATAGTTTAGGATGCCTTGACTCT 60.686 44.000 0.00 0.00 42.18 3.24
3608 4062 4.513318 GCATAGTTTAGGATGCCTTGACTC 59.487 45.833 0.00 0.00 42.18 3.36
3609 4063 4.080356 TGCATAGTTTAGGATGCCTTGACT 60.080 41.667 4.53 0.00 46.45 3.41
3610 4064 4.199310 TGCATAGTTTAGGATGCCTTGAC 58.801 43.478 4.53 0.00 46.45 3.18
3611 4065 4.502105 TGCATAGTTTAGGATGCCTTGA 57.498 40.909 4.53 0.00 46.45 3.02
3612 4066 5.068636 AGATGCATAGTTTAGGATGCCTTG 58.931 41.667 0.00 0.00 46.45 3.61
3613 4067 5.316158 AGATGCATAGTTTAGGATGCCTT 57.684 39.130 0.00 0.00 46.45 4.35
3614 4068 4.989875 AGATGCATAGTTTAGGATGCCT 57.010 40.909 0.00 0.00 46.45 4.75
3615 4069 6.396829 AAAAGATGCATAGTTTAGGATGCC 57.603 37.500 0.00 0.00 46.45 4.40
3638 4092 9.231297 GGTGAGCATGCTCCTATATAAAATAAA 57.769 33.333 37.92 16.39 42.09 1.40
3639 4093 8.605947 AGGTGAGCATGCTCCTATATAAAATAA 58.394 33.333 37.92 16.81 42.09 1.40
3640 4094 8.150827 AGGTGAGCATGCTCCTATATAAAATA 57.849 34.615 37.92 17.00 42.09 1.40
3641 4095 7.025520 AGGTGAGCATGCTCCTATATAAAAT 57.974 36.000 37.92 13.95 42.09 1.82
3642 4096 6.439636 AGGTGAGCATGCTCCTATATAAAA 57.560 37.500 37.92 18.19 42.09 1.52
3643 4097 6.439636 AAGGTGAGCATGCTCCTATATAAA 57.560 37.500 37.92 18.88 42.09 1.40
3644 4098 7.739995 ATAAGGTGAGCATGCTCCTATATAA 57.260 36.000 37.92 19.59 42.09 0.98
3646 4100 7.927683 ATATAAGGTGAGCATGCTCCTATAT 57.072 36.000 37.92 30.02 42.09 0.86
3647 4101 7.014711 GCTATATAAGGTGAGCATGCTCCTATA 59.985 40.741 37.92 29.42 42.09 1.31
3648 4102 6.183360 GCTATATAAGGTGAGCATGCTCCTAT 60.183 42.308 37.92 28.56 42.09 2.57
3649 4103 5.127845 GCTATATAAGGTGAGCATGCTCCTA 59.872 44.000 37.92 25.13 42.09 2.94
3650 4104 4.081198 GCTATATAAGGTGAGCATGCTCCT 60.081 45.833 37.92 28.98 42.09 3.69
3651 4105 4.187694 GCTATATAAGGTGAGCATGCTCC 58.812 47.826 37.92 29.00 42.09 4.70
3652 4106 4.825422 TGCTATATAAGGTGAGCATGCTC 58.175 43.478 35.76 35.76 39.93 4.26
3653 4107 4.285517 ACTGCTATATAAGGTGAGCATGCT 59.714 41.667 22.92 22.92 43.61 3.79
3654 4108 4.573900 ACTGCTATATAAGGTGAGCATGC 58.426 43.478 10.51 10.51 43.61 4.06
3655 4109 9.875691 TTAATACTGCTATATAAGGTGAGCATG 57.124 33.333 0.00 0.00 43.61 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.