Multiple sequence alignment - TraesCS3B01G122800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G122800 chr3B 100.000 4820 0 0 1 4820 93894742 93889923 0.000000e+00 8901.0
1 TraesCS3B01G122800 chr3B 95.109 3844 120 35 663 4485 94493745 94489949 0.000000e+00 5995.0
2 TraesCS3B01G122800 chr3B 89.836 1338 70 32 2260 3579 93361967 93360678 0.000000e+00 1657.0
3 TraesCS3B01G122800 chr3B 90.244 1107 58 26 2486 3579 93461389 93460320 0.000000e+00 1400.0
4 TraesCS3B01G122800 chr3B 93.239 917 46 6 3572 4485 93460294 93459391 0.000000e+00 1336.0
5 TraesCS3B01G122800 chr3B 93.021 917 47 8 3572 4485 93360652 93359750 0.000000e+00 1323.0
6 TraesCS3B01G122800 chr3B 92.084 619 36 8 3868 4485 93320487 93319881 0.000000e+00 859.0
7 TraesCS3B01G122800 chr3B 91.909 618 37 4 3868 4485 93419875 93419271 0.000000e+00 852.0
8 TraesCS3B01G122800 chr3B 85.932 853 39 24 2132 2934 94447589 94446768 0.000000e+00 835.0
9 TraesCS3B01G122800 chr3B 98.026 304 6 0 4499 4802 94489965 94489662 3.300000e-146 529.0
10 TraesCS3B01G122800 chr3B 97.970 197 4 0 2074 2270 93362626 93362430 4.620000e-90 342.0
11 TraesCS3B01G122800 chr3B 97.970 197 4 0 2074 2270 93472084 93471888 4.620000e-90 342.0
12 TraesCS3B01G122800 chr3B 94.416 197 11 0 4499 4695 93319897 93319701 2.180000e-78 303.0
13 TraesCS3B01G122800 chr3B 93.909 197 12 0 4499 4695 93359766 93359570 1.010000e-76 298.0
14 TraesCS3B01G122800 chr3B 93.909 197 12 0 4499 4695 93419287 93419091 1.010000e-76 298.0
15 TraesCS3B01G122800 chr3B 93.909 197 12 0 4499 4695 93459407 93459211 1.010000e-76 298.0
16 TraesCS3B01G122800 chr3B 95.890 73 2 1 589 660 94493865 94493793 3.050000e-22 117.0
17 TraesCS3B01G122800 chr3B 96.875 64 2 0 2074 2137 94449142 94449079 1.830000e-19 108.0
18 TraesCS3B01G122800 chr3A 89.912 2954 168 63 666 3579 67788321 67785458 0.000000e+00 3685.0
19 TraesCS3B01G122800 chr3A 86.090 1294 118 26 3572 4820 67785432 67784156 0.000000e+00 1336.0
20 TraesCS3B01G122800 chr3A 90.385 624 35 17 2960 3579 67581406 67580804 0.000000e+00 797.0
21 TraesCS3B01G122800 chr3A 90.760 487 30 9 2483 2964 67581960 67581484 1.890000e-178 636.0
22 TraesCS3B01G122800 chr3A 81.654 387 40 15 3572 3942 67580778 67580407 4.720000e-75 292.0
23 TraesCS3B01G122800 chr3A 94.667 75 3 1 589 662 67788449 67788375 1.100000e-21 115.0
24 TraesCS3B01G122800 chr3A 97.436 39 1 0 3337 3375 67578063 67578025 3.110000e-07 67.6
25 TraesCS3B01G122800 chr3D 89.571 2167 104 66 1447 3579 58595166 58593088 0.000000e+00 2638.0
26 TraesCS3B01G122800 chr3D 90.612 948 51 11 3572 4485 58527370 58526427 0.000000e+00 1223.0
27 TraesCS3B01G122800 chr3D 89.895 762 47 18 663 1405 58595919 58595169 0.000000e+00 953.0
28 TraesCS3B01G122800 chr3D 84.699 549 49 14 1022 1566 58539759 58539242 2.570000e-142 516.0
29 TraesCS3B01G122800 chr3D 94.357 319 18 0 4502 4820 58526440 58526122 1.560000e-134 490.0
30 TraesCS3B01G122800 chr3D 86.293 321 41 2 4120 4438 58575175 58574856 3.570000e-91 346.0
31 TraesCS3B01G122800 chr3D 92.398 171 11 2 3409 3579 58527564 58527396 4.820000e-60 243.0
32 TraesCS3B01G122800 chr3D 84.756 164 6 3 3572 3716 58593062 58592899 3.890000e-31 147.0
33 TraesCS3B01G122800 chr3D 85.870 92 11 2 3363 3453 58562420 58562330 3.970000e-16 97.1
34 TraesCS3B01G122800 chr3D 92.982 57 4 0 1672 1728 58527648 58527592 3.090000e-12 84.2
35 TraesCS3B01G122800 chr5A 78.221 551 86 14 9 531 547554247 547554791 6.020000e-84 322.0
36 TraesCS3B01G122800 chr7D 76.134 507 86 14 1 480 605484918 605485416 2.900000e-57 233.0
37 TraesCS3B01G122800 chr5B 90.741 54 5 0 1318 1371 60794187 60794240 6.690000e-09 73.1
38 TraesCS3B01G122800 chr6A 85.294 68 10 0 4630 4697 144724069 144724136 2.410000e-08 71.3
39 TraesCS3B01G122800 chr4B 89.286 56 4 2 1317 1372 168992574 168992627 8.660000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G122800 chr3B 93889923 93894742 4819 True 8901.000000 8901 100.000000 1 4820 1 chr3B.!!$R2 4819
1 TraesCS3B01G122800 chr3B 94489662 94493865 4203 True 2213.666667 5995 96.341667 589 4802 3 chr3B.!!$R8 4213
2 TraesCS3B01G122800 chr3B 93459211 93461389 2178 True 1011.333333 1400 92.464000 2486 4695 3 chr3B.!!$R6 2209
3 TraesCS3B01G122800 chr3B 93359570 93362626 3056 True 905.000000 1657 93.684000 2074 4695 4 chr3B.!!$R4 2621
4 TraesCS3B01G122800 chr3B 93319701 93320487 786 True 581.000000 859 93.250000 3868 4695 2 chr3B.!!$R3 827
5 TraesCS3B01G122800 chr3B 93419091 93419875 784 True 575.000000 852 92.909000 3868 4695 2 chr3B.!!$R5 827
6 TraesCS3B01G122800 chr3B 94446768 94449142 2374 True 471.500000 835 91.403500 2074 2934 2 chr3B.!!$R7 860
7 TraesCS3B01G122800 chr3A 67784156 67788449 4293 True 1712.000000 3685 90.223000 589 4820 3 chr3A.!!$R2 4231
8 TraesCS3B01G122800 chr3A 67578025 67581960 3935 True 448.150000 797 90.058750 2483 3942 4 chr3A.!!$R1 1459
9 TraesCS3B01G122800 chr3D 58592899 58595919 3020 True 1246.000000 2638 88.074000 663 3716 3 chr3D.!!$R5 3053
10 TraesCS3B01G122800 chr3D 58539242 58539759 517 True 516.000000 516 84.699000 1022 1566 1 chr3D.!!$R1 544
11 TraesCS3B01G122800 chr3D 58526122 58527648 1526 True 510.050000 1223 92.587250 1672 4820 4 chr3D.!!$R4 3148
12 TraesCS3B01G122800 chr5A 547554247 547554791 544 False 322.000000 322 78.221000 9 531 1 chr5A.!!$F1 522

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
74 75 0.035598 TATTGGTGTGGGTGTCGTGG 59.964 55.0 0.00 0.00 0.00 4.94 F
377 378 0.108207 TTTTTACTCCCGCCACCGAA 59.892 50.0 0.00 0.00 36.29 4.30 F
467 468 0.174162 GTTCGGCTAGCTTCCGGTTA 59.826 55.0 21.84 9.27 46.43 2.85 F
750 809 0.394899 CCCAAAGTCCTCCATCAGCC 60.395 60.0 0.00 0.00 0.00 4.85 F
1332 1424 0.606130 TTGATGGCTGTGTGCATCGT 60.606 50.0 0.00 0.00 45.15 3.73 F
2378 4468 0.394488 TCTCCGAGAGCAGTGGTAGG 60.394 60.0 0.00 0.00 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1239 1327 0.250295 GAGGTAGGGCGCATAATGCA 60.250 55.000 10.83 0.0 45.36 3.96 R
1241 1329 0.317160 TCGAGGTAGGGCGCATAATG 59.683 55.000 10.83 0.0 0.00 1.90 R
1575 1680 0.325933 TGAGGTGGTGCTGAATCTGG 59.674 55.000 0.00 0.0 0.00 3.86 R
1828 1938 1.075896 GGAGGAGGTGGAGGACGAT 60.076 63.158 0.00 0.0 0.00 3.73 R
3017 5254 1.525077 GACACGTCCACTGGCCAAA 60.525 57.895 7.01 0.0 0.00 3.28 R
3961 6702 1.600957 GTAGCTCGTGTACGCTATGGA 59.399 52.381 4.67 0.0 40.47 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.189188 CCGTACTCGAGGGCGGTG 62.189 72.222 29.57 14.06 39.41 4.94
55 56 2.665603 GAAGGAGCCGAGCCACTT 59.334 61.111 0.00 0.00 0.00 3.16
56 57 1.614241 GGAAGGAGCCGAGCCACTTA 61.614 60.000 0.00 0.00 0.00 2.24
57 58 0.466124 GAAGGAGCCGAGCCACTTAT 59.534 55.000 0.00 0.00 0.00 1.73
58 59 0.912486 AAGGAGCCGAGCCACTTATT 59.088 50.000 0.00 0.00 0.00 1.40
59 60 0.179000 AGGAGCCGAGCCACTTATTG 59.821 55.000 0.00 0.00 0.00 1.90
71 72 1.804151 CACTTATTGGTGTGGGTGTCG 59.196 52.381 0.00 0.00 33.04 4.35
72 73 1.418637 ACTTATTGGTGTGGGTGTCGT 59.581 47.619 0.00 0.00 0.00 4.34
73 74 1.804151 CTTATTGGTGTGGGTGTCGTG 59.196 52.381 0.00 0.00 0.00 4.35
74 75 0.035598 TATTGGTGTGGGTGTCGTGG 59.964 55.000 0.00 0.00 0.00 4.94
75 76 1.990160 ATTGGTGTGGGTGTCGTGGT 61.990 55.000 0.00 0.00 0.00 4.16
76 77 2.280592 GGTGTGGGTGTCGTGGTC 60.281 66.667 0.00 0.00 0.00 4.02
77 78 2.660552 GTGTGGGTGTCGTGGTCG 60.661 66.667 0.00 0.00 38.55 4.79
78 79 3.918977 TGTGGGTGTCGTGGTCGG 61.919 66.667 0.00 0.00 37.69 4.79
79 80 3.920196 GTGGGTGTCGTGGTCGGT 61.920 66.667 0.00 0.00 37.69 4.69
80 81 3.155861 TGGGTGTCGTGGTCGGTT 61.156 61.111 0.00 0.00 37.69 4.44
81 82 1.831726 TGGGTGTCGTGGTCGGTTA 60.832 57.895 0.00 0.00 37.69 2.85
82 83 1.186917 TGGGTGTCGTGGTCGGTTAT 61.187 55.000 0.00 0.00 37.69 1.89
83 84 0.459063 GGGTGTCGTGGTCGGTTATC 60.459 60.000 0.00 0.00 37.69 1.75
84 85 0.529378 GGTGTCGTGGTCGGTTATCT 59.471 55.000 0.00 0.00 37.69 1.98
85 86 1.468736 GGTGTCGTGGTCGGTTATCTC 60.469 57.143 0.00 0.00 37.69 2.75
86 87 0.813184 TGTCGTGGTCGGTTATCTCC 59.187 55.000 0.00 0.00 37.69 3.71
87 88 1.101331 GTCGTGGTCGGTTATCTCCT 58.899 55.000 0.00 0.00 37.69 3.69
88 89 1.065251 GTCGTGGTCGGTTATCTCCTC 59.935 57.143 0.00 0.00 37.69 3.71
89 90 0.384669 CGTGGTCGGTTATCTCCTCC 59.615 60.000 0.00 0.00 0.00 4.30
90 91 1.481871 GTGGTCGGTTATCTCCTCCA 58.518 55.000 0.00 0.00 0.00 3.86
91 92 1.136500 GTGGTCGGTTATCTCCTCCAC 59.864 57.143 0.00 0.00 40.09 4.02
92 93 1.006758 TGGTCGGTTATCTCCTCCACT 59.993 52.381 0.00 0.00 0.00 4.00
93 94 1.682323 GGTCGGTTATCTCCTCCACTC 59.318 57.143 0.00 0.00 0.00 3.51
94 95 2.376109 GTCGGTTATCTCCTCCACTCA 58.624 52.381 0.00 0.00 0.00 3.41
95 96 2.099427 GTCGGTTATCTCCTCCACTCAC 59.901 54.545 0.00 0.00 0.00 3.51
96 97 1.065701 CGGTTATCTCCTCCACTCACG 59.934 57.143 0.00 0.00 0.00 4.35
97 98 2.100989 GGTTATCTCCTCCACTCACGT 58.899 52.381 0.00 0.00 0.00 4.49
98 99 2.099427 GGTTATCTCCTCCACTCACGTC 59.901 54.545 0.00 0.00 0.00 4.34
99 100 2.054232 TATCTCCTCCACTCACGTCC 57.946 55.000 0.00 0.00 0.00 4.79
100 101 0.684805 ATCTCCTCCACTCACGTCCC 60.685 60.000 0.00 0.00 0.00 4.46
101 102 2.283676 TCCTCCACTCACGTCCCC 60.284 66.667 0.00 0.00 0.00 4.81
102 103 3.391382 CCTCCACTCACGTCCCCC 61.391 72.222 0.00 0.00 0.00 5.40
103 104 2.603473 CTCCACTCACGTCCCCCA 60.603 66.667 0.00 0.00 0.00 4.96
104 105 2.920912 TCCACTCACGTCCCCCAC 60.921 66.667 0.00 0.00 0.00 4.61
112 113 4.143333 CGTCCCCCACGGCTACTG 62.143 72.222 0.00 0.00 45.46 2.74
113 114 3.782443 GTCCCCCACGGCTACTGG 61.782 72.222 0.00 0.00 0.00 4.00
131 132 4.821589 CGGACGCCCAGGCTCTTC 62.822 72.222 7.17 0.41 39.32 2.87
132 133 4.475135 GGACGCCCAGGCTCTTCC 62.475 72.222 7.17 6.13 39.32 3.46
134 135 3.378399 GACGCCCAGGCTCTTCCTC 62.378 68.421 7.17 0.00 45.52 3.71
135 136 3.080121 CGCCCAGGCTCTTCCTCT 61.080 66.667 7.17 0.00 45.52 3.69
136 137 2.588989 GCCCAGGCTCTTCCTCTG 59.411 66.667 0.08 0.00 45.52 3.35
137 138 2.588989 CCCAGGCTCTTCCTCTGC 59.411 66.667 0.00 0.00 45.52 4.26
138 139 2.186384 CCAGGCTCTTCCTCTGCG 59.814 66.667 0.00 0.00 45.52 5.18
139 140 2.186384 CAGGCTCTTCCTCTGCGG 59.814 66.667 0.00 0.00 45.52 5.69
140 141 3.780173 AGGCTCTTCCTCTGCGGC 61.780 66.667 0.00 0.00 43.20 6.53
141 142 3.780173 GGCTCTTCCTCTGCGGCT 61.780 66.667 0.00 0.00 0.00 5.52
142 143 2.511145 GCTCTTCCTCTGCGGCTG 60.511 66.667 0.00 0.00 0.00 4.85
143 144 2.977178 CTCTTCCTCTGCGGCTGT 59.023 61.111 0.00 0.00 0.00 4.40
144 145 1.153667 CTCTTCCTCTGCGGCTGTC 60.154 63.158 0.00 0.00 0.00 3.51
145 146 2.507992 CTTCCTCTGCGGCTGTCG 60.508 66.667 0.00 0.00 42.76 4.35
157 158 4.504916 CTGTCGCGGCAGAGGGAG 62.505 72.222 36.17 8.13 38.70 4.30
165 166 4.779733 GCAGAGGGAGGACGGGGA 62.780 72.222 0.00 0.00 0.00 4.81
166 167 2.038975 CAGAGGGAGGACGGGGAA 59.961 66.667 0.00 0.00 0.00 3.97
167 168 2.060980 CAGAGGGAGGACGGGGAAG 61.061 68.421 0.00 0.00 0.00 3.46
168 169 2.039137 GAGGGAGGACGGGGAAGT 59.961 66.667 0.00 0.00 0.00 3.01
169 170 2.039137 AGGGAGGACGGGGAAGTC 59.961 66.667 0.00 0.00 40.25 3.01
170 171 3.459063 GGGAGGACGGGGAAGTCG 61.459 72.222 0.00 0.00 41.81 4.18
171 172 3.459063 GGAGGACGGGGAAGTCGG 61.459 72.222 0.00 0.00 41.81 4.79
172 173 2.362120 GAGGACGGGGAAGTCGGA 60.362 66.667 0.00 0.00 41.81 4.55
173 174 2.362632 AGGACGGGGAAGTCGGAG 60.363 66.667 0.00 0.00 41.81 4.63
174 175 2.362120 GGACGGGGAAGTCGGAGA 60.362 66.667 0.00 0.00 41.81 3.71
175 176 2.416432 GGACGGGGAAGTCGGAGAG 61.416 68.421 0.00 0.00 41.81 3.20
176 177 3.066233 GACGGGGAAGTCGGAGAGC 62.066 68.421 0.00 0.00 36.95 4.09
177 178 3.839432 CGGGGAAGTCGGAGAGCC 61.839 72.222 0.00 0.00 36.95 4.70
222 223 3.960237 GGCGACGATTGTGGACAA 58.040 55.556 0.00 0.00 40.51 3.18
223 224 1.787847 GGCGACGATTGTGGACAAG 59.212 57.895 0.00 0.00 39.47 3.16
224 225 0.669318 GGCGACGATTGTGGACAAGA 60.669 55.000 0.00 0.00 39.47 3.02
225 226 1.144969 GCGACGATTGTGGACAAGAA 58.855 50.000 0.00 0.00 39.47 2.52
226 227 1.732259 GCGACGATTGTGGACAAGAAT 59.268 47.619 0.00 0.00 39.47 2.40
227 228 2.222819 GCGACGATTGTGGACAAGAATC 60.223 50.000 0.00 0.00 39.47 2.52
228 229 2.348666 CGACGATTGTGGACAAGAATCC 59.651 50.000 0.00 0.00 39.47 3.01
229 230 3.334691 GACGATTGTGGACAAGAATCCA 58.665 45.455 0.00 0.00 46.92 3.41
235 236 0.613260 TGGACAAGAATCCACCCTCG 59.387 55.000 0.00 0.00 44.14 4.63
236 237 0.613777 GGACAAGAATCCACCCTCGT 59.386 55.000 0.00 0.00 38.77 4.18
237 238 1.676014 GGACAAGAATCCACCCTCGTG 60.676 57.143 0.00 0.00 38.77 4.35
248 249 3.402681 CCTCGTGGTGCTGGGGAT 61.403 66.667 0.00 0.00 0.00 3.85
249 250 2.187946 CTCGTGGTGCTGGGGATC 59.812 66.667 0.00 0.00 0.00 3.36
250 251 3.391665 CTCGTGGTGCTGGGGATCC 62.392 68.421 1.92 1.92 0.00 3.36
251 252 4.838152 CGTGGTGCTGGGGATCCG 62.838 72.222 5.45 0.00 35.24 4.18
283 284 4.962836 GGCGGCCATGGGATCTGG 62.963 72.222 15.62 0.00 36.81 3.86
293 294 5.238624 CCATGGGATCTGGCCATATATAG 57.761 47.826 5.51 0.00 0.00 1.31
294 295 4.042560 CCATGGGATCTGGCCATATATAGG 59.957 50.000 5.51 0.00 0.00 2.57
295 296 3.668821 TGGGATCTGGCCATATATAGGG 58.331 50.000 5.51 9.14 0.00 3.53
296 297 2.982488 GGGATCTGGCCATATATAGGGG 59.018 54.545 15.00 7.15 0.00 4.79
301 302 3.386543 GCCATATATAGGGGCAGCG 57.613 57.895 15.00 0.00 46.92 5.18
302 303 0.179045 GCCATATATAGGGGCAGCGG 60.179 60.000 15.00 0.00 46.92 5.52
303 304 0.469917 CCATATATAGGGGCAGCGGG 59.530 60.000 5.48 0.00 0.00 6.13
304 305 1.496060 CATATATAGGGGCAGCGGGA 58.504 55.000 0.00 0.00 0.00 5.14
305 306 2.050144 CATATATAGGGGCAGCGGGAT 58.950 52.381 0.00 0.00 0.00 3.85
306 307 1.496060 TATATAGGGGCAGCGGGATG 58.504 55.000 0.00 0.00 0.00 3.51
307 308 1.915078 ATATAGGGGCAGCGGGATGC 61.915 60.000 0.00 0.00 45.74 3.91
328 329 4.464262 GCCAGAGGCGGGAATTAG 57.536 61.111 0.00 0.00 39.62 1.73
329 330 1.227973 GCCAGAGGCGGGAATTAGG 60.228 63.158 0.00 0.00 39.62 2.69
330 331 1.451936 CCAGAGGCGGGAATTAGGG 59.548 63.158 0.00 0.00 0.00 3.53
331 332 1.054406 CCAGAGGCGGGAATTAGGGA 61.054 60.000 0.00 0.00 0.00 4.20
332 333 0.394565 CAGAGGCGGGAATTAGGGAG 59.605 60.000 0.00 0.00 0.00 4.30
333 334 0.764752 AGAGGCGGGAATTAGGGAGG 60.765 60.000 0.00 0.00 0.00 4.30
334 335 0.763223 GAGGCGGGAATTAGGGAGGA 60.763 60.000 0.00 0.00 0.00 3.71
335 336 0.764752 AGGCGGGAATTAGGGAGGAG 60.765 60.000 0.00 0.00 0.00 3.69
336 337 1.755384 GCGGGAATTAGGGAGGAGG 59.245 63.158 0.00 0.00 0.00 4.30
337 338 0.763223 GCGGGAATTAGGGAGGAGGA 60.763 60.000 0.00 0.00 0.00 3.71
338 339 1.343069 CGGGAATTAGGGAGGAGGAG 58.657 60.000 0.00 0.00 0.00 3.69
339 340 1.133136 CGGGAATTAGGGAGGAGGAGA 60.133 57.143 0.00 0.00 0.00 3.71
340 341 2.615391 GGGAATTAGGGAGGAGGAGAG 58.385 57.143 0.00 0.00 0.00 3.20
341 342 2.615391 GGAATTAGGGAGGAGGAGAGG 58.385 57.143 0.00 0.00 0.00 3.69
342 343 1.974957 GAATTAGGGAGGAGGAGAGGC 59.025 57.143 0.00 0.00 0.00 4.70
343 344 0.944999 ATTAGGGAGGAGGAGAGGCA 59.055 55.000 0.00 0.00 0.00 4.75
344 345 0.716591 TTAGGGAGGAGGAGAGGCAA 59.283 55.000 0.00 0.00 0.00 4.52
345 346 0.716591 TAGGGAGGAGGAGAGGCAAA 59.283 55.000 0.00 0.00 0.00 3.68
346 347 0.620121 AGGGAGGAGGAGAGGCAAAG 60.620 60.000 0.00 0.00 0.00 2.77
347 348 1.631071 GGGAGGAGGAGAGGCAAAGG 61.631 65.000 0.00 0.00 0.00 3.11
348 349 0.618968 GGAGGAGGAGAGGCAAAGGA 60.619 60.000 0.00 0.00 0.00 3.36
349 350 0.829990 GAGGAGGAGAGGCAAAGGAG 59.170 60.000 0.00 0.00 0.00 3.69
350 351 0.620121 AGGAGGAGAGGCAAAGGAGG 60.620 60.000 0.00 0.00 0.00 4.30
351 352 1.631071 GGAGGAGAGGCAAAGGAGGG 61.631 65.000 0.00 0.00 0.00 4.30
352 353 2.264120 GAGGAGAGGCAAAGGAGGGC 62.264 65.000 0.00 0.00 0.00 5.19
353 354 2.124942 GAGAGGCAAAGGAGGGCG 60.125 66.667 0.00 0.00 35.71 6.13
354 355 2.607750 AGAGGCAAAGGAGGGCGA 60.608 61.111 0.00 0.00 35.71 5.54
355 356 2.124942 GAGGCAAAGGAGGGCGAG 60.125 66.667 0.00 0.00 35.71 5.03
356 357 2.607750 AGGCAAAGGAGGGCGAGA 60.608 61.111 0.00 0.00 35.71 4.04
357 358 1.977293 GAGGCAAAGGAGGGCGAGAT 61.977 60.000 0.00 0.00 35.71 2.75
358 359 1.077429 GGCAAAGGAGGGCGAGATT 60.077 57.895 0.00 0.00 0.00 2.40
359 360 0.681243 GGCAAAGGAGGGCGAGATTT 60.681 55.000 0.00 0.00 0.00 2.17
360 361 1.177401 GCAAAGGAGGGCGAGATTTT 58.823 50.000 0.00 0.00 0.00 1.82
361 362 1.546029 GCAAAGGAGGGCGAGATTTTT 59.454 47.619 0.00 0.00 0.00 1.94
375 376 4.382788 TTTTTACTCCCGCCACCG 57.617 55.556 0.00 0.00 0.00 4.94
376 377 1.753470 TTTTTACTCCCGCCACCGA 59.247 52.632 0.00 0.00 36.29 4.69
377 378 0.108207 TTTTTACTCCCGCCACCGAA 59.892 50.000 0.00 0.00 36.29 4.30
378 379 0.603439 TTTTACTCCCGCCACCGAAC 60.603 55.000 0.00 0.00 36.29 3.95
379 380 2.768503 TTTACTCCCGCCACCGAACG 62.769 60.000 0.00 0.00 36.29 3.95
395 396 4.553323 CCGAACGGTGGAGTAAATATAGG 58.447 47.826 4.99 0.00 0.00 2.57
396 397 3.985925 CGAACGGTGGAGTAAATATAGGC 59.014 47.826 0.00 0.00 0.00 3.93
397 398 3.655276 ACGGTGGAGTAAATATAGGCG 57.345 47.619 0.00 0.00 0.00 5.52
398 399 2.288640 ACGGTGGAGTAAATATAGGCGC 60.289 50.000 0.00 0.00 0.00 6.53
399 400 2.334838 GGTGGAGTAAATATAGGCGCG 58.665 52.381 0.00 0.00 0.00 6.86
400 401 2.334838 GTGGAGTAAATATAGGCGCGG 58.665 52.381 8.83 0.00 0.00 6.46
401 402 2.029649 GTGGAGTAAATATAGGCGCGGA 60.030 50.000 8.83 0.00 0.00 5.54
402 403 2.629137 TGGAGTAAATATAGGCGCGGAA 59.371 45.455 8.83 0.00 0.00 4.30
403 404 3.259876 TGGAGTAAATATAGGCGCGGAAT 59.740 43.478 8.83 0.00 0.00 3.01
404 405 4.463539 TGGAGTAAATATAGGCGCGGAATA 59.536 41.667 8.83 0.00 0.00 1.75
405 406 5.047164 TGGAGTAAATATAGGCGCGGAATAA 60.047 40.000 8.83 0.00 0.00 1.40
406 407 5.519206 GGAGTAAATATAGGCGCGGAATAAG 59.481 44.000 8.83 0.00 0.00 1.73
407 408 4.868734 AGTAAATATAGGCGCGGAATAAGC 59.131 41.667 8.83 0.00 0.00 3.09
414 415 3.719214 GCGGAATAAGCGGTGGAG 58.281 61.111 0.00 0.00 0.00 3.86
415 416 1.887707 GCGGAATAAGCGGTGGAGG 60.888 63.158 0.00 0.00 0.00 4.30
416 417 1.820581 CGGAATAAGCGGTGGAGGA 59.179 57.895 0.00 0.00 0.00 3.71
417 418 0.177141 CGGAATAAGCGGTGGAGGAA 59.823 55.000 0.00 0.00 0.00 3.36
418 419 1.202651 CGGAATAAGCGGTGGAGGAAT 60.203 52.381 0.00 0.00 0.00 3.01
419 420 2.745152 CGGAATAAGCGGTGGAGGAATT 60.745 50.000 0.00 0.00 0.00 2.17
420 421 3.288092 GGAATAAGCGGTGGAGGAATTT 58.712 45.455 0.00 0.00 0.00 1.82
421 422 3.699538 GGAATAAGCGGTGGAGGAATTTT 59.300 43.478 0.00 0.00 0.00 1.82
422 423 4.159693 GGAATAAGCGGTGGAGGAATTTTT 59.840 41.667 0.00 0.00 0.00 1.94
446 447 5.975693 TTTGCTCCACTATTGGTTTTAGG 57.024 39.130 0.00 0.00 44.35 2.69
447 448 3.963129 TGCTCCACTATTGGTTTTAGGG 58.037 45.455 0.00 0.00 44.35 3.53
448 449 3.288092 GCTCCACTATTGGTTTTAGGGG 58.712 50.000 0.00 0.00 44.35 4.79
449 450 3.308904 GCTCCACTATTGGTTTTAGGGGT 60.309 47.826 0.00 0.00 44.35 4.95
450 451 4.813133 GCTCCACTATTGGTTTTAGGGGTT 60.813 45.833 0.00 0.00 44.35 4.11
451 452 4.925836 TCCACTATTGGTTTTAGGGGTTC 58.074 43.478 0.00 0.00 44.35 3.62
452 453 3.692593 CCACTATTGGTTTTAGGGGTTCG 59.307 47.826 0.00 0.00 35.80 3.95
453 454 3.692593 CACTATTGGTTTTAGGGGTTCGG 59.307 47.826 0.00 0.00 0.00 4.30
454 455 1.552578 ATTGGTTTTAGGGGTTCGGC 58.447 50.000 0.00 0.00 0.00 5.54
455 456 0.479378 TTGGTTTTAGGGGTTCGGCT 59.521 50.000 0.00 0.00 0.00 5.52
456 457 1.360185 TGGTTTTAGGGGTTCGGCTA 58.640 50.000 0.00 0.00 0.00 3.93
457 458 1.279846 TGGTTTTAGGGGTTCGGCTAG 59.720 52.381 0.00 0.00 0.00 3.42
458 459 1.376543 GTTTTAGGGGTTCGGCTAGC 58.623 55.000 6.04 6.04 0.00 3.42
459 460 1.065636 GTTTTAGGGGTTCGGCTAGCT 60.066 52.381 15.72 0.00 0.00 3.32
460 461 1.282382 TTTAGGGGTTCGGCTAGCTT 58.718 50.000 15.72 0.00 0.00 3.74
461 462 0.828677 TTAGGGGTTCGGCTAGCTTC 59.171 55.000 15.72 0.00 0.00 3.86
462 463 1.047034 TAGGGGTTCGGCTAGCTTCC 61.047 60.000 15.72 11.37 0.00 3.46
464 465 2.202892 GGTTCGGCTAGCTTCCGG 60.203 66.667 21.84 0.00 46.43 5.14
465 466 2.577593 GTTCGGCTAGCTTCCGGT 59.422 61.111 21.84 0.00 46.43 5.28
466 467 1.079336 GTTCGGCTAGCTTCCGGTT 60.079 57.895 21.84 0.00 46.43 4.44
467 468 0.174162 GTTCGGCTAGCTTCCGGTTA 59.826 55.000 21.84 9.27 46.43 2.85
468 469 0.896923 TTCGGCTAGCTTCCGGTTAA 59.103 50.000 21.84 10.20 46.43 2.01
469 470 0.896923 TCGGCTAGCTTCCGGTTAAA 59.103 50.000 21.84 4.77 46.43 1.52
470 471 1.134907 TCGGCTAGCTTCCGGTTAAAG 60.135 52.381 21.84 0.00 46.43 1.85
471 472 1.134907 CGGCTAGCTTCCGGTTAAAGA 60.135 52.381 15.72 0.00 42.99 2.52
472 473 2.675889 CGGCTAGCTTCCGGTTAAAGAA 60.676 50.000 15.72 0.00 42.99 2.52
473 474 2.937149 GGCTAGCTTCCGGTTAAAGAAG 59.063 50.000 15.72 0.00 41.99 2.85
474 475 3.597255 GCTAGCTTCCGGTTAAAGAAGT 58.403 45.455 7.70 0.00 41.29 3.01
475 476 4.382362 GGCTAGCTTCCGGTTAAAGAAGTA 60.382 45.833 15.72 0.00 41.29 2.24
476 477 5.173664 GCTAGCTTCCGGTTAAAGAAGTAA 58.826 41.667 7.70 0.00 41.29 2.24
477 478 5.640783 GCTAGCTTCCGGTTAAAGAAGTAAA 59.359 40.000 7.70 0.00 41.29 2.01
478 479 6.148315 GCTAGCTTCCGGTTAAAGAAGTAAAA 59.852 38.462 7.70 0.00 41.29 1.52
479 480 6.309712 AGCTTCCGGTTAAAGAAGTAAAAC 57.690 37.500 0.00 0.00 41.29 2.43
480 481 5.240183 AGCTTCCGGTTAAAGAAGTAAAACC 59.760 40.000 0.00 0.00 41.29 3.27
489 490 9.518906 GGTTAAAGAAGTAAAACCGAATTTTCA 57.481 29.630 1.23 0.00 40.99 2.69
492 493 8.851960 AAAGAAGTAAAACCGAATTTTCACTC 57.148 30.769 1.23 0.00 40.99 3.51
493 494 6.967135 AGAAGTAAAACCGAATTTTCACTCC 58.033 36.000 1.23 0.00 40.99 3.85
494 495 6.771267 AGAAGTAAAACCGAATTTTCACTCCT 59.229 34.615 1.23 0.00 40.99 3.69
495 496 6.555812 AGTAAAACCGAATTTTCACTCCTC 57.444 37.500 1.23 0.00 40.99 3.71
496 497 6.296803 AGTAAAACCGAATTTTCACTCCTCT 58.703 36.000 1.23 0.00 40.99 3.69
497 498 7.447594 AGTAAAACCGAATTTTCACTCCTCTA 58.552 34.615 1.23 0.00 40.99 2.43
498 499 7.935210 AGTAAAACCGAATTTTCACTCCTCTAA 59.065 33.333 1.23 0.00 40.99 2.10
499 500 6.555812 AAACCGAATTTTCACTCCTCTAAC 57.444 37.500 0.00 0.00 0.00 2.34
500 501 5.223449 ACCGAATTTTCACTCCTCTAACA 57.777 39.130 0.00 0.00 0.00 2.41
501 502 5.238583 ACCGAATTTTCACTCCTCTAACAG 58.761 41.667 0.00 0.00 0.00 3.16
502 503 5.011738 ACCGAATTTTCACTCCTCTAACAGA 59.988 40.000 0.00 0.00 0.00 3.41
503 504 6.109359 CCGAATTTTCACTCCTCTAACAGAT 58.891 40.000 0.00 0.00 0.00 2.90
504 505 7.093465 ACCGAATTTTCACTCCTCTAACAGATA 60.093 37.037 0.00 0.00 0.00 1.98
505 506 7.928706 CCGAATTTTCACTCCTCTAACAGATAT 59.071 37.037 0.00 0.00 0.00 1.63
506 507 9.967346 CGAATTTTCACTCCTCTAACAGATATA 57.033 33.333 0.00 0.00 0.00 0.86
509 510 7.841282 TTTCACTCCTCTAACAGATATAGGG 57.159 40.000 0.00 0.00 30.57 3.53
510 511 5.893500 TCACTCCTCTAACAGATATAGGGG 58.106 45.833 0.00 0.00 41.62 4.79
511 512 5.020132 CACTCCTCTAACAGATATAGGGGG 58.980 50.000 0.00 0.00 40.78 5.40
512 513 4.675550 ACTCCTCTAACAGATATAGGGGGT 59.324 45.833 0.00 0.00 40.78 4.95
513 514 5.222379 ACTCCTCTAACAGATATAGGGGGTC 60.222 48.000 0.00 0.00 40.78 4.46
514 515 4.017808 CCTCTAACAGATATAGGGGGTCG 58.982 52.174 0.00 0.00 37.37 4.79
515 516 4.017808 CTCTAACAGATATAGGGGGTCGG 58.982 52.174 0.00 0.00 0.00 4.79
516 517 2.789323 AACAGATATAGGGGGTCGGT 57.211 50.000 0.00 0.00 0.00 4.69
517 518 2.789323 ACAGATATAGGGGGTCGGTT 57.211 50.000 0.00 0.00 0.00 4.44
518 519 3.909427 ACAGATATAGGGGGTCGGTTA 57.091 47.619 0.00 0.00 0.00 2.85
519 520 3.775910 ACAGATATAGGGGGTCGGTTAG 58.224 50.000 0.00 0.00 0.00 2.34
520 521 3.400322 ACAGATATAGGGGGTCGGTTAGA 59.600 47.826 0.00 0.00 0.00 2.10
521 522 4.017808 CAGATATAGGGGGTCGGTTAGAG 58.982 52.174 0.00 0.00 0.00 2.43
522 523 3.921486 AGATATAGGGGGTCGGTTAGAGA 59.079 47.826 0.00 0.00 0.00 3.10
523 524 4.544968 AGATATAGGGGGTCGGTTAGAGAT 59.455 45.833 0.00 0.00 0.00 2.75
524 525 2.376695 TAGGGGGTCGGTTAGAGATG 57.623 55.000 0.00 0.00 0.00 2.90
525 526 1.049289 AGGGGGTCGGTTAGAGATGC 61.049 60.000 0.00 0.00 0.00 3.91
526 527 1.446366 GGGGTCGGTTAGAGATGCC 59.554 63.158 0.00 0.00 0.00 4.40
527 528 1.049289 GGGGTCGGTTAGAGATGCCT 61.049 60.000 0.00 0.00 0.00 4.75
528 529 0.831307 GGGTCGGTTAGAGATGCCTT 59.169 55.000 0.00 0.00 0.00 4.35
529 530 2.037144 GGGTCGGTTAGAGATGCCTTA 58.963 52.381 0.00 0.00 0.00 2.69
530 531 2.433239 GGGTCGGTTAGAGATGCCTTAA 59.567 50.000 0.00 0.00 0.00 1.85
531 532 3.492829 GGGTCGGTTAGAGATGCCTTAAG 60.493 52.174 0.00 0.00 0.00 1.85
532 533 3.124560 GTCGGTTAGAGATGCCTTAAGC 58.875 50.000 0.00 0.00 44.14 3.09
533 534 3.031736 TCGGTTAGAGATGCCTTAAGCT 58.968 45.455 0.00 0.00 44.23 3.74
534 535 4.037684 GTCGGTTAGAGATGCCTTAAGCTA 59.962 45.833 0.00 0.00 44.23 3.32
535 536 4.278669 TCGGTTAGAGATGCCTTAAGCTAG 59.721 45.833 0.00 0.00 44.23 3.42
536 537 4.038162 CGGTTAGAGATGCCTTAAGCTAGT 59.962 45.833 0.00 0.00 44.23 2.57
537 538 5.534407 GGTTAGAGATGCCTTAAGCTAGTC 58.466 45.833 0.00 0.00 44.23 2.59
538 539 5.069251 GGTTAGAGATGCCTTAAGCTAGTCA 59.931 44.000 0.00 0.00 44.23 3.41
539 540 4.664150 AGAGATGCCTTAAGCTAGTCAC 57.336 45.455 0.00 0.00 44.23 3.67
540 541 4.026744 AGAGATGCCTTAAGCTAGTCACA 58.973 43.478 0.00 0.00 44.23 3.58
541 542 4.653341 AGAGATGCCTTAAGCTAGTCACAT 59.347 41.667 0.00 0.00 44.23 3.21
542 543 4.701765 AGATGCCTTAAGCTAGTCACATG 58.298 43.478 0.00 0.00 44.23 3.21
543 544 2.632377 TGCCTTAAGCTAGTCACATGC 58.368 47.619 0.00 0.00 44.23 4.06
544 545 2.027285 TGCCTTAAGCTAGTCACATGCA 60.027 45.455 0.00 0.00 44.23 3.96
545 546 3.209410 GCCTTAAGCTAGTCACATGCAT 58.791 45.455 0.00 0.00 38.99 3.96
546 547 4.141733 TGCCTTAAGCTAGTCACATGCATA 60.142 41.667 0.00 0.00 44.23 3.14
547 548 4.212214 GCCTTAAGCTAGTCACATGCATAC 59.788 45.833 0.00 0.00 38.99 2.39
548 549 5.359756 CCTTAAGCTAGTCACATGCATACA 58.640 41.667 0.00 0.00 0.00 2.29
549 550 5.817296 CCTTAAGCTAGTCACATGCATACAA 59.183 40.000 0.00 0.00 0.00 2.41
550 551 6.238211 CCTTAAGCTAGTCACATGCATACAAC 60.238 42.308 0.00 0.00 0.00 3.32
551 552 3.535561 AGCTAGTCACATGCATACAACC 58.464 45.455 0.00 0.00 0.00 3.77
552 553 3.055167 AGCTAGTCACATGCATACAACCA 60.055 43.478 0.00 0.00 0.00 3.67
553 554 3.879295 GCTAGTCACATGCATACAACCAT 59.121 43.478 0.00 0.00 0.00 3.55
554 555 4.260907 GCTAGTCACATGCATACAACCATG 60.261 45.833 0.00 0.00 43.34 3.66
556 557 3.691118 AGTCACATGCATACAACCATGTC 59.309 43.478 0.00 0.00 46.56 3.06
557 558 3.691118 GTCACATGCATACAACCATGTCT 59.309 43.478 0.00 0.00 46.56 3.41
558 559 4.156556 GTCACATGCATACAACCATGTCTT 59.843 41.667 0.00 0.00 46.56 3.01
559 560 4.766373 TCACATGCATACAACCATGTCTTT 59.234 37.500 0.00 0.00 46.56 2.52
560 561 5.097529 CACATGCATACAACCATGTCTTTC 58.902 41.667 0.00 0.00 46.56 2.62
561 562 4.158394 ACATGCATACAACCATGTCTTTCC 59.842 41.667 0.00 0.00 46.56 3.13
562 563 3.088532 TGCATACAACCATGTCTTTCCC 58.911 45.455 0.00 0.00 41.05 3.97
563 564 3.245229 TGCATACAACCATGTCTTTCCCT 60.245 43.478 0.00 0.00 41.05 4.20
564 565 3.378427 GCATACAACCATGTCTTTCCCTC 59.622 47.826 0.00 0.00 41.05 4.30
565 566 4.848357 CATACAACCATGTCTTTCCCTCT 58.152 43.478 0.00 0.00 41.05 3.69
566 567 3.884037 ACAACCATGTCTTTCCCTCTT 57.116 42.857 0.00 0.00 33.41 2.85
567 568 4.184649 ACAACCATGTCTTTCCCTCTTT 57.815 40.909 0.00 0.00 33.41 2.52
568 569 4.546674 ACAACCATGTCTTTCCCTCTTTT 58.453 39.130 0.00 0.00 33.41 2.27
569 570 4.584743 ACAACCATGTCTTTCCCTCTTTTC 59.415 41.667 0.00 0.00 33.41 2.29
570 571 4.731313 ACCATGTCTTTCCCTCTTTTCT 57.269 40.909 0.00 0.00 0.00 2.52
571 572 4.657013 ACCATGTCTTTCCCTCTTTTCTC 58.343 43.478 0.00 0.00 0.00 2.87
572 573 4.352298 ACCATGTCTTTCCCTCTTTTCTCT 59.648 41.667 0.00 0.00 0.00 3.10
573 574 4.699257 CCATGTCTTTCCCTCTTTTCTCTG 59.301 45.833 0.00 0.00 0.00 3.35
574 575 5.513788 CCATGTCTTTCCCTCTTTTCTCTGA 60.514 44.000 0.00 0.00 0.00 3.27
575 576 5.630415 TGTCTTTCCCTCTTTTCTCTGAA 57.370 39.130 0.00 0.00 0.00 3.02
576 577 5.615289 TGTCTTTCCCTCTTTTCTCTGAAG 58.385 41.667 0.00 0.00 0.00 3.02
577 578 5.366768 TGTCTTTCCCTCTTTTCTCTGAAGA 59.633 40.000 0.00 0.00 0.00 2.87
578 579 5.699001 GTCTTTCCCTCTTTTCTCTGAAGAC 59.301 44.000 0.00 0.00 0.00 3.01
579 580 5.604650 TCTTTCCCTCTTTTCTCTGAAGACT 59.395 40.000 0.00 0.00 0.00 3.24
580 581 6.782988 TCTTTCCCTCTTTTCTCTGAAGACTA 59.217 38.462 0.00 0.00 0.00 2.59
581 582 7.456269 TCTTTCCCTCTTTTCTCTGAAGACTAT 59.544 37.037 0.00 0.00 0.00 2.12
582 583 8.666129 TTTCCCTCTTTTCTCTGAAGACTATA 57.334 34.615 0.00 0.00 0.00 1.31
583 584 7.648039 TCCCTCTTTTCTCTGAAGACTATAC 57.352 40.000 0.00 0.00 0.00 1.47
584 585 7.182760 TCCCTCTTTTCTCTGAAGACTATACA 58.817 38.462 0.00 0.00 0.00 2.29
585 586 7.122948 TCCCTCTTTTCTCTGAAGACTATACAC 59.877 40.741 0.00 0.00 0.00 2.90
586 587 7.093727 CCCTCTTTTCTCTGAAGACTATACACA 60.094 40.741 0.00 0.00 0.00 3.72
587 588 7.973388 CCTCTTTTCTCTGAAGACTATACACAG 59.027 40.741 0.00 0.00 0.00 3.66
610 611 4.333926 GCCATGCTGAAGTAACTAAGAAGG 59.666 45.833 0.00 0.00 0.00 3.46
612 613 5.352569 CCATGCTGAAGTAACTAAGAAGGTG 59.647 44.000 0.00 0.00 0.00 4.00
713 769 2.807247 GCCATATTTCCGGCCAACT 58.193 52.632 2.24 0.00 42.82 3.16
750 809 0.394899 CCCAAAGTCCTCCATCAGCC 60.395 60.000 0.00 0.00 0.00 4.85
776 837 4.336993 GTCTCTCTCACCATCGTGTAGATT 59.663 45.833 0.00 0.00 41.09 2.40
800 868 2.607187 AGTTCGTCGACATCATCAACC 58.393 47.619 17.16 0.00 0.00 3.77
848 918 9.755804 AAGAAAAGAAAAGAAAAGAAGGCTATG 57.244 29.630 0.00 0.00 0.00 2.23
862 932 1.221414 GCTATGGCTAGCTTCGGTTG 58.779 55.000 15.72 0.39 45.78 3.77
954 1031 1.555075 CCCCCAGCTATATATGCACGT 59.445 52.381 0.00 0.00 0.00 4.49
971 1048 1.829533 GTTCGCATGCATCCCCCAT 60.830 57.895 19.57 0.00 0.00 4.00
977 1054 1.151450 ATGCATCCCCCATCGGAAC 59.849 57.895 0.00 0.00 34.93 3.62
1052 1133 1.724623 GTGCACATATATACGCACGGG 59.275 52.381 13.17 0.00 44.54 5.28
1070 1151 1.413812 GGGCCCATTTCCATTGATGAC 59.586 52.381 19.95 0.00 0.00 3.06
1111 1196 3.614092 ACCTACGGTGTCTAGATCGAAA 58.386 45.455 16.27 6.48 32.98 3.46
1239 1327 1.890625 TTACGCCGCCAGGTATGTGT 61.891 55.000 0.00 0.00 40.50 3.72
1240 1328 2.566057 TACGCCGCCAGGTATGTGTG 62.566 60.000 0.00 0.00 40.50 3.82
1241 1329 3.508840 GCCGCCAGGTATGTGTGC 61.509 66.667 0.00 0.00 40.50 4.57
1242 1330 2.046411 CCGCCAGGTATGTGTGCA 60.046 61.111 0.00 0.00 0.00 4.57
1243 1331 1.451927 CCGCCAGGTATGTGTGCAT 60.452 57.895 0.00 0.00 39.03 3.96
1245 1333 1.662517 CGCCAGGTATGTGTGCATTA 58.337 50.000 0.00 0.00 36.58 1.90
1246 1334 2.221169 CGCCAGGTATGTGTGCATTAT 58.779 47.619 0.00 0.00 36.58 1.28
1290 1378 1.123217 GTTCATCGCGCACAGATATCG 59.877 52.381 8.75 0.00 0.00 2.92
1304 1396 4.250116 AGATATCGATCTGCCAGTTGAC 57.750 45.455 0.00 0.00 41.12 3.18
1332 1424 0.606130 TTGATGGCTGTGTGCATCGT 60.606 50.000 0.00 0.00 45.15 3.73
1471 1570 3.656559 TCGGTTCAAGTTACTTAGGTGC 58.343 45.455 0.00 0.00 0.00 5.01
1519 1618 7.256619 GGGATATCTGTCTGATGGATCTCTTTT 60.257 40.741 2.05 0.00 36.65 2.27
1567 1672 3.768922 AGAGCAGCACGGAGGAGC 61.769 66.667 0.00 0.00 0.00 4.70
1720 1830 4.828925 GAGGACGAGCCAGCTGCC 62.829 72.222 8.66 2.53 42.71 4.85
1730 1840 1.589993 CCAGCTGCCTACATCGTCG 60.590 63.158 8.66 0.00 0.00 5.12
1828 1938 4.039092 GGCTGCAGCTTCCCCTCA 62.039 66.667 35.82 0.00 41.70 3.86
2374 4464 2.393271 AATTTCTCCGAGAGCAGTGG 57.607 50.000 0.00 0.00 0.00 4.00
2375 4465 1.270907 ATTTCTCCGAGAGCAGTGGT 58.729 50.000 0.00 0.00 0.00 4.16
2376 4466 1.919240 TTTCTCCGAGAGCAGTGGTA 58.081 50.000 0.00 0.00 0.00 3.25
2377 4467 1.464734 TTCTCCGAGAGCAGTGGTAG 58.535 55.000 0.00 0.00 0.00 3.18
2378 4468 0.394488 TCTCCGAGAGCAGTGGTAGG 60.394 60.000 0.00 0.00 0.00 3.18
2379 4469 1.379977 TCCGAGAGCAGTGGTAGGG 60.380 63.158 0.00 0.00 0.00 3.53
2380 4470 1.682684 CCGAGAGCAGTGGTAGGGT 60.683 63.158 0.00 0.00 0.00 4.34
2416 4512 9.486497 TTCTTTGACTAGCTAATGATGATCATC 57.514 33.333 25.91 25.91 35.76 2.92
2461 4585 0.660595 CGTCGATACTGATCACCGCC 60.661 60.000 0.00 0.00 31.78 6.13
2610 4737 4.335594 GGTCGAAATCCAAATAACCAGAGG 59.664 45.833 0.00 0.00 0.00 3.69
2745 4880 0.929244 AATGACCAGATGGGGGAAGG 59.071 55.000 3.48 0.00 42.91 3.46
3017 5254 7.066887 TCACGTGTTGGCTTCATATATTTCAAT 59.933 33.333 16.51 0.00 0.00 2.57
3164 5417 4.649218 TCATATGGAATCTCTCGGTTGACA 59.351 41.667 2.13 0.00 0.00 3.58
3207 5460 6.038714 GCACCAGCAAGCTAGATTTTTACTAT 59.961 38.462 0.00 0.00 41.58 2.12
3208 5461 7.415653 GCACCAGCAAGCTAGATTTTTACTATT 60.416 37.037 0.00 0.00 41.58 1.73
3238 5494 8.978539 TGATGATGAAAAGTAGTAACGCATATC 58.021 33.333 0.00 0.00 0.00 1.63
3722 6320 7.489160 TGCACAGTGATTAATTAGTAGTCGAT 58.511 34.615 4.15 0.00 0.00 3.59
3755 6353 6.664428 TGAGCTTATATACATGTGTAGGCA 57.336 37.500 9.11 0.00 33.52 4.75
3844 6444 7.341769 AGTGCATTATTCTTAGTTTGCCCAATA 59.658 33.333 0.00 0.00 0.00 1.90
3892 6492 2.674852 CGCAATATCATCCATTCCCTCG 59.325 50.000 0.00 0.00 0.00 4.63
3961 6702 2.472029 CACTCCAACCCTATCTGGTCT 58.528 52.381 0.00 0.00 37.76 3.85
3986 6776 1.351012 CGTACACGAGCTACTCCCG 59.649 63.158 0.00 0.00 43.02 5.14
4103 6893 2.286184 GCGGCGTTGTGATAACCAATAG 60.286 50.000 9.37 0.00 0.00 1.73
4415 7216 2.066262 GCACGTTGCATGTAGTAGTGT 58.934 47.619 13.51 0.00 44.26 3.55
4457 7258 1.248785 ATGCAGCCTTTGAGCACTGG 61.249 55.000 0.00 0.00 41.60 4.00
4475 7288 4.228912 CTGGAGCCACAGTTAACAAAAG 57.771 45.455 8.61 0.00 33.81 2.27
4476 7289 2.955660 TGGAGCCACAGTTAACAAAAGG 59.044 45.455 8.61 5.31 0.00 3.11
4477 7290 3.219281 GGAGCCACAGTTAACAAAAGGA 58.781 45.455 8.61 0.00 0.00 3.36
4478 7291 3.826729 GGAGCCACAGTTAACAAAAGGAT 59.173 43.478 8.61 2.67 0.00 3.24
4479 7292 4.280929 GGAGCCACAGTTAACAAAAGGATT 59.719 41.667 8.61 0.00 0.00 3.01
4480 7293 5.200368 AGCCACAGTTAACAAAAGGATTG 57.800 39.130 8.61 0.00 0.00 2.67
4481 7294 4.039124 AGCCACAGTTAACAAAAGGATTGG 59.961 41.667 8.61 3.43 0.00 3.16
4482 7295 4.799255 GCCACAGTTAACAAAAGGATTGGG 60.799 45.833 8.61 0.00 0.00 4.12
4483 7296 4.306600 CACAGTTAACAAAAGGATTGGGC 58.693 43.478 8.61 0.00 0.00 5.36
4484 7297 3.323691 ACAGTTAACAAAAGGATTGGGCC 59.676 43.478 8.61 0.00 0.00 5.80
4485 7298 3.323403 CAGTTAACAAAAGGATTGGGCCA 59.677 43.478 0.00 0.00 0.00 5.36
4486 7299 3.970640 AGTTAACAAAAGGATTGGGCCAA 59.029 39.130 23.33 23.33 0.00 4.52
4487 7300 2.928801 AACAAAAGGATTGGGCCAAC 57.071 45.000 23.59 15.15 0.00 3.77
4488 7301 2.101640 ACAAAAGGATTGGGCCAACT 57.898 45.000 23.59 12.69 0.00 3.16
4489 7302 2.407562 ACAAAAGGATTGGGCCAACTT 58.592 42.857 23.59 18.25 0.00 2.66
4490 7303 2.368548 ACAAAAGGATTGGGCCAACTTC 59.631 45.455 23.59 16.28 0.00 3.01
4491 7304 2.368221 CAAAAGGATTGGGCCAACTTCA 59.632 45.455 23.59 0.00 0.00 3.02
4492 7305 2.397044 AAGGATTGGGCCAACTTCAA 57.603 45.000 23.59 0.00 0.00 2.69
4493 7306 2.397044 AGGATTGGGCCAACTTCAAA 57.603 45.000 23.59 0.00 0.00 2.69
4494 7307 2.688477 AGGATTGGGCCAACTTCAAAA 58.312 42.857 23.59 0.00 0.00 2.44
4495 7308 3.044894 AGGATTGGGCCAACTTCAAAAA 58.955 40.909 23.59 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.189188 CCTCGAGTACGGCCGGTG 62.189 72.222 31.76 13.88 40.21 4.94
7 8 3.109612 CTCACCGCCCTCGAGTACG 62.110 68.421 12.31 14.01 38.10 3.67
30 31 2.030562 CGGCTCCTTCCACACGTT 59.969 61.111 0.00 0.00 0.00 3.99
31 32 2.915659 TCGGCTCCTTCCACACGT 60.916 61.111 0.00 0.00 0.00 4.49
33 34 2.435059 GCTCGGCTCCTTCCACAC 60.435 66.667 0.00 0.00 0.00 3.82
36 37 3.706373 GTGGCTCGGCTCCTTCCA 61.706 66.667 0.00 0.00 0.00 3.53
55 56 0.035598 CCACGACACCCACACCAATA 59.964 55.000 0.00 0.00 0.00 1.90
56 57 1.228124 CCACGACACCCACACCAAT 60.228 57.895 0.00 0.00 0.00 3.16
57 58 2.190843 CCACGACACCCACACCAA 59.809 61.111 0.00 0.00 0.00 3.67
58 59 3.084646 ACCACGACACCCACACCA 61.085 61.111 0.00 0.00 0.00 4.17
59 60 2.280592 GACCACGACACCCACACC 60.281 66.667 0.00 0.00 0.00 4.16
60 61 2.660552 CGACCACGACACCCACAC 60.661 66.667 0.00 0.00 42.66 3.82
61 62 3.918977 CCGACCACGACACCCACA 61.919 66.667 0.00 0.00 42.66 4.17
62 63 2.086251 TAACCGACCACGACACCCAC 62.086 60.000 0.00 0.00 42.66 4.61
63 64 1.186917 ATAACCGACCACGACACCCA 61.187 55.000 0.00 0.00 42.66 4.51
64 65 0.459063 GATAACCGACCACGACACCC 60.459 60.000 0.00 0.00 42.66 4.61
65 66 0.529378 AGATAACCGACCACGACACC 59.471 55.000 0.00 0.00 42.66 4.16
66 67 1.468736 GGAGATAACCGACCACGACAC 60.469 57.143 0.00 0.00 42.66 3.67
67 68 0.813184 GGAGATAACCGACCACGACA 59.187 55.000 0.00 0.00 42.66 4.35
68 69 1.065251 GAGGAGATAACCGACCACGAC 59.935 57.143 0.00 0.00 42.66 4.34
69 70 1.386533 GAGGAGATAACCGACCACGA 58.613 55.000 0.00 0.00 42.66 4.35
70 71 0.384669 GGAGGAGATAACCGACCACG 59.615 60.000 0.00 0.00 39.43 4.94
71 72 1.136500 GTGGAGGAGATAACCGACCAC 59.864 57.143 15.80 15.80 45.61 4.16
72 73 1.006758 AGTGGAGGAGATAACCGACCA 59.993 52.381 0.00 0.00 38.24 4.02
73 74 1.682323 GAGTGGAGGAGATAACCGACC 59.318 57.143 0.00 0.00 34.73 4.79
74 75 2.099427 GTGAGTGGAGGAGATAACCGAC 59.901 54.545 0.00 0.00 34.73 4.79
75 76 2.376109 GTGAGTGGAGGAGATAACCGA 58.624 52.381 0.00 0.00 34.73 4.69
76 77 1.065701 CGTGAGTGGAGGAGATAACCG 59.934 57.143 0.00 0.00 34.73 4.44
77 78 2.100989 ACGTGAGTGGAGGAGATAACC 58.899 52.381 0.00 0.00 46.97 2.85
96 97 3.782443 CCAGTAGCCGTGGGGGAC 61.782 72.222 0.00 0.00 38.47 4.46
101 102 4.814294 GTCCGCCAGTAGCCGTGG 62.814 72.222 0.00 0.00 38.78 4.94
124 125 3.780173 AGCCGCAGAGGAAGAGCC 61.780 66.667 0.00 0.00 45.00 4.70
125 126 2.511145 CAGCCGCAGAGGAAGAGC 60.511 66.667 0.00 0.00 45.00 4.09
126 127 1.153667 GACAGCCGCAGAGGAAGAG 60.154 63.158 0.00 0.00 45.00 2.85
127 128 2.973899 GACAGCCGCAGAGGAAGA 59.026 61.111 0.00 0.00 45.00 2.87
128 129 2.507992 CGACAGCCGCAGAGGAAG 60.508 66.667 0.00 0.00 45.00 3.46
140 141 4.504916 CTCCCTCTGCCGCGACAG 62.505 72.222 17.01 17.01 39.12 3.51
148 149 4.779733 TCCCCGTCCTCCCTCTGC 62.780 72.222 0.00 0.00 0.00 4.26
149 150 2.038975 TTCCCCGTCCTCCCTCTG 59.961 66.667 0.00 0.00 0.00 3.35
150 151 2.364961 CTTCCCCGTCCTCCCTCT 59.635 66.667 0.00 0.00 0.00 3.69
151 152 2.039137 ACTTCCCCGTCCTCCCTC 59.961 66.667 0.00 0.00 0.00 4.30
152 153 2.039137 GACTTCCCCGTCCTCCCT 59.961 66.667 0.00 0.00 0.00 4.20
153 154 3.459063 CGACTTCCCCGTCCTCCC 61.459 72.222 0.00 0.00 0.00 4.30
154 155 3.459063 CCGACTTCCCCGTCCTCC 61.459 72.222 0.00 0.00 0.00 4.30
155 156 2.362120 TCCGACTTCCCCGTCCTC 60.362 66.667 0.00 0.00 0.00 3.71
156 157 2.362632 CTCCGACTTCCCCGTCCT 60.363 66.667 0.00 0.00 0.00 3.85
157 158 2.362120 TCTCCGACTTCCCCGTCC 60.362 66.667 0.00 0.00 0.00 4.79
158 159 3.066233 GCTCTCCGACTTCCCCGTC 62.066 68.421 0.00 0.00 0.00 4.79
159 160 3.069318 GCTCTCCGACTTCCCCGT 61.069 66.667 0.00 0.00 0.00 5.28
160 161 3.839432 GGCTCTCCGACTTCCCCG 61.839 72.222 0.00 0.00 0.00 5.73
203 204 3.849953 GTCCACAATCGTCGCCGC 61.850 66.667 0.00 0.00 0.00 6.53
204 205 1.955529 CTTGTCCACAATCGTCGCCG 61.956 60.000 0.00 0.00 35.02 6.46
205 206 0.669318 TCTTGTCCACAATCGTCGCC 60.669 55.000 0.00 0.00 35.02 5.54
206 207 1.144969 TTCTTGTCCACAATCGTCGC 58.855 50.000 0.00 0.00 35.02 5.19
207 208 2.348666 GGATTCTTGTCCACAATCGTCG 59.651 50.000 0.00 0.00 38.20 5.12
208 209 3.334691 TGGATTCTTGTCCACAATCGTC 58.665 45.455 0.00 0.00 43.20 4.20
209 210 3.417069 TGGATTCTTGTCCACAATCGT 57.583 42.857 0.00 0.00 43.20 3.73
216 217 0.613260 CGAGGGTGGATTCTTGTCCA 59.387 55.000 0.00 0.00 45.78 4.02
217 218 0.613777 ACGAGGGTGGATTCTTGTCC 59.386 55.000 0.00 0.00 38.81 4.02
218 219 1.726853 CACGAGGGTGGATTCTTGTC 58.273 55.000 0.00 0.00 40.58 3.18
219 220 3.935993 CACGAGGGTGGATTCTTGT 57.064 52.632 0.00 0.00 40.58 3.16
231 232 3.391665 GATCCCCAGCACCACGAGG 62.392 68.421 0.00 0.00 42.21 4.63
232 233 2.187946 GATCCCCAGCACCACGAG 59.812 66.667 0.00 0.00 0.00 4.18
233 234 3.399181 GGATCCCCAGCACCACGA 61.399 66.667 0.00 0.00 0.00 4.35
234 235 4.838152 CGGATCCCCAGCACCACG 62.838 72.222 6.06 0.00 0.00 4.94
266 267 4.962836 CCAGATCCCATGGCCGCC 62.963 72.222 6.09 1.04 0.00 6.13
271 272 4.042560 CCTATATATGGCCAGATCCCATGG 59.957 50.000 17.98 7.05 42.80 3.66
272 273 4.042560 CCCTATATATGGCCAGATCCCATG 59.957 50.000 17.98 3.11 42.80 3.66
273 274 4.246143 CCCTATATATGGCCAGATCCCAT 58.754 47.826 17.98 7.77 44.85 4.00
274 275 3.636060 CCCCTATATATGGCCAGATCCCA 60.636 52.174 17.98 0.00 36.66 4.37
275 276 2.982488 CCCCTATATATGGCCAGATCCC 59.018 54.545 17.98 0.00 0.00 3.85
276 277 2.373502 GCCCCTATATATGGCCAGATCC 59.626 54.545 17.98 0.00 39.30 3.36
277 278 3.048600 TGCCCCTATATATGGCCAGATC 58.951 50.000 17.98 0.65 44.72 2.75
278 279 3.051581 CTGCCCCTATATATGGCCAGAT 58.948 50.000 18.52 18.52 44.72 2.90
279 280 2.481441 CTGCCCCTATATATGGCCAGA 58.519 52.381 13.05 7.22 44.72 3.86
280 281 1.133976 GCTGCCCCTATATATGGCCAG 60.134 57.143 13.05 13.47 44.72 4.85
281 282 0.918983 GCTGCCCCTATATATGGCCA 59.081 55.000 8.56 8.56 44.72 5.36
282 283 0.179045 CGCTGCCCCTATATATGGCC 60.179 60.000 16.70 0.00 44.72 5.36
283 284 0.179045 CCGCTGCCCCTATATATGGC 60.179 60.000 13.86 13.86 45.56 4.40
284 285 0.469917 CCCGCTGCCCCTATATATGG 59.530 60.000 0.00 0.00 0.00 2.74
285 286 1.496060 TCCCGCTGCCCCTATATATG 58.504 55.000 0.00 0.00 0.00 1.78
286 287 2.050144 CATCCCGCTGCCCCTATATAT 58.950 52.381 0.00 0.00 0.00 0.86
287 288 1.496060 CATCCCGCTGCCCCTATATA 58.504 55.000 0.00 0.00 0.00 0.86
288 289 1.915078 GCATCCCGCTGCCCCTATAT 61.915 60.000 0.00 0.00 36.10 0.86
289 290 2.592993 GCATCCCGCTGCCCCTATA 61.593 63.158 0.00 0.00 36.10 1.31
290 291 3.958860 GCATCCCGCTGCCCCTAT 61.959 66.667 0.00 0.00 36.10 2.57
311 312 1.227973 CCTAATTCCCGCCTCTGGC 60.228 63.158 0.00 0.00 46.75 4.85
312 313 1.054406 TCCCTAATTCCCGCCTCTGG 61.054 60.000 0.00 0.00 0.00 3.86
313 314 0.394565 CTCCCTAATTCCCGCCTCTG 59.605 60.000 0.00 0.00 0.00 3.35
314 315 0.764752 CCTCCCTAATTCCCGCCTCT 60.765 60.000 0.00 0.00 0.00 3.69
315 316 0.763223 TCCTCCCTAATTCCCGCCTC 60.763 60.000 0.00 0.00 0.00 4.70
316 317 0.764752 CTCCTCCCTAATTCCCGCCT 60.765 60.000 0.00 0.00 0.00 5.52
317 318 1.755384 CTCCTCCCTAATTCCCGCC 59.245 63.158 0.00 0.00 0.00 6.13
318 319 0.763223 TCCTCCTCCCTAATTCCCGC 60.763 60.000 0.00 0.00 0.00 6.13
319 320 1.133136 TCTCCTCCTCCCTAATTCCCG 60.133 57.143 0.00 0.00 0.00 5.14
320 321 2.615391 CTCTCCTCCTCCCTAATTCCC 58.385 57.143 0.00 0.00 0.00 3.97
321 322 2.615391 CCTCTCCTCCTCCCTAATTCC 58.385 57.143 0.00 0.00 0.00 3.01
322 323 1.974957 GCCTCTCCTCCTCCCTAATTC 59.025 57.143 0.00 0.00 0.00 2.17
323 324 1.295292 TGCCTCTCCTCCTCCCTAATT 59.705 52.381 0.00 0.00 0.00 1.40
324 325 0.944999 TGCCTCTCCTCCTCCCTAAT 59.055 55.000 0.00 0.00 0.00 1.73
325 326 0.716591 TTGCCTCTCCTCCTCCCTAA 59.283 55.000 0.00 0.00 0.00 2.69
326 327 0.716591 TTTGCCTCTCCTCCTCCCTA 59.283 55.000 0.00 0.00 0.00 3.53
327 328 0.620121 CTTTGCCTCTCCTCCTCCCT 60.620 60.000 0.00 0.00 0.00 4.20
328 329 1.631071 CCTTTGCCTCTCCTCCTCCC 61.631 65.000 0.00 0.00 0.00 4.30
329 330 0.618968 TCCTTTGCCTCTCCTCCTCC 60.619 60.000 0.00 0.00 0.00 4.30
330 331 0.829990 CTCCTTTGCCTCTCCTCCTC 59.170 60.000 0.00 0.00 0.00 3.71
331 332 0.620121 CCTCCTTTGCCTCTCCTCCT 60.620 60.000 0.00 0.00 0.00 3.69
332 333 1.631071 CCCTCCTTTGCCTCTCCTCC 61.631 65.000 0.00 0.00 0.00 4.30
333 334 1.911471 CCCTCCTTTGCCTCTCCTC 59.089 63.158 0.00 0.00 0.00 3.71
334 335 2.304831 GCCCTCCTTTGCCTCTCCT 61.305 63.158 0.00 0.00 0.00 3.69
335 336 2.273776 GCCCTCCTTTGCCTCTCC 59.726 66.667 0.00 0.00 0.00 3.71
336 337 2.124942 CGCCCTCCTTTGCCTCTC 60.125 66.667 0.00 0.00 0.00 3.20
337 338 2.607750 TCGCCCTCCTTTGCCTCT 60.608 61.111 0.00 0.00 0.00 3.69
338 339 1.977293 ATCTCGCCCTCCTTTGCCTC 61.977 60.000 0.00 0.00 0.00 4.70
339 340 1.566298 AATCTCGCCCTCCTTTGCCT 61.566 55.000 0.00 0.00 0.00 4.75
340 341 0.681243 AAATCTCGCCCTCCTTTGCC 60.681 55.000 0.00 0.00 0.00 4.52
341 342 1.177401 AAAATCTCGCCCTCCTTTGC 58.823 50.000 0.00 0.00 0.00 3.68
358 359 0.108207 TTCGGTGGCGGGAGTAAAAA 59.892 50.000 0.00 0.00 0.00 1.94
359 360 0.603439 GTTCGGTGGCGGGAGTAAAA 60.603 55.000 0.00 0.00 0.00 1.52
360 361 1.004679 GTTCGGTGGCGGGAGTAAA 60.005 57.895 0.00 0.00 0.00 2.01
361 362 2.658422 GTTCGGTGGCGGGAGTAA 59.342 61.111 0.00 0.00 0.00 2.24
362 363 3.751246 CGTTCGGTGGCGGGAGTA 61.751 66.667 0.00 0.00 0.00 2.59
372 373 4.038402 CCTATATTTACTCCACCGTTCGGT 59.962 45.833 11.27 11.27 39.42 4.69
373 374 4.553323 CCTATATTTACTCCACCGTTCGG 58.447 47.826 9.81 9.81 0.00 4.30
374 375 3.985925 GCCTATATTTACTCCACCGTTCG 59.014 47.826 0.00 0.00 0.00 3.95
375 376 3.985925 CGCCTATATTTACTCCACCGTTC 59.014 47.826 0.00 0.00 0.00 3.95
376 377 3.801293 GCGCCTATATTTACTCCACCGTT 60.801 47.826 0.00 0.00 0.00 4.44
377 378 2.288640 GCGCCTATATTTACTCCACCGT 60.289 50.000 0.00 0.00 0.00 4.83
378 379 2.334838 GCGCCTATATTTACTCCACCG 58.665 52.381 0.00 0.00 0.00 4.94
379 380 2.334838 CGCGCCTATATTTACTCCACC 58.665 52.381 0.00 0.00 0.00 4.61
380 381 2.029649 TCCGCGCCTATATTTACTCCAC 60.030 50.000 0.00 0.00 0.00 4.02
381 382 2.241160 TCCGCGCCTATATTTACTCCA 58.759 47.619 0.00 0.00 0.00 3.86
382 383 3.308438 TTCCGCGCCTATATTTACTCC 57.692 47.619 0.00 0.00 0.00 3.85
383 384 5.005490 GCTTATTCCGCGCCTATATTTACTC 59.995 44.000 0.00 0.00 0.00 2.59
384 385 4.868734 GCTTATTCCGCGCCTATATTTACT 59.131 41.667 0.00 0.00 0.00 2.24
385 386 4.259690 CGCTTATTCCGCGCCTATATTTAC 60.260 45.833 0.00 0.00 44.33 2.01
386 387 3.861113 CGCTTATTCCGCGCCTATATTTA 59.139 43.478 0.00 0.00 44.33 1.40
387 388 2.671396 CGCTTATTCCGCGCCTATATTT 59.329 45.455 0.00 0.00 44.33 1.40
388 389 2.268298 CGCTTATTCCGCGCCTATATT 58.732 47.619 0.00 0.00 44.33 1.28
389 390 1.922570 CGCTTATTCCGCGCCTATAT 58.077 50.000 0.00 0.00 44.33 0.86
390 391 3.411808 CGCTTATTCCGCGCCTATA 57.588 52.632 0.00 0.00 44.33 1.31
391 392 4.261888 CGCTTATTCCGCGCCTAT 57.738 55.556 0.00 0.00 44.33 2.57
397 398 1.887707 CCTCCACCGCTTATTCCGC 60.888 63.158 0.00 0.00 0.00 5.54
398 399 0.177141 TTCCTCCACCGCTTATTCCG 59.823 55.000 0.00 0.00 0.00 4.30
399 400 2.640316 ATTCCTCCACCGCTTATTCC 57.360 50.000 0.00 0.00 0.00 3.01
400 401 4.983671 AAAATTCCTCCACCGCTTATTC 57.016 40.909 0.00 0.00 0.00 1.75
431 432 3.692593 CCGAACCCCTAAAACCAATAGTG 59.307 47.826 0.00 0.00 0.00 2.74
432 433 3.874977 GCCGAACCCCTAAAACCAATAGT 60.875 47.826 0.00 0.00 0.00 2.12
433 434 2.686405 GCCGAACCCCTAAAACCAATAG 59.314 50.000 0.00 0.00 0.00 1.73
434 435 2.309458 AGCCGAACCCCTAAAACCAATA 59.691 45.455 0.00 0.00 0.00 1.90
435 436 1.076513 AGCCGAACCCCTAAAACCAAT 59.923 47.619 0.00 0.00 0.00 3.16
436 437 0.479378 AGCCGAACCCCTAAAACCAA 59.521 50.000 0.00 0.00 0.00 3.67
437 438 1.279846 CTAGCCGAACCCCTAAAACCA 59.720 52.381 0.00 0.00 0.00 3.67
438 439 2.015588 GCTAGCCGAACCCCTAAAACC 61.016 57.143 2.29 0.00 0.00 3.27
439 440 1.065636 AGCTAGCCGAACCCCTAAAAC 60.066 52.381 12.13 0.00 0.00 2.43
440 441 1.282382 AGCTAGCCGAACCCCTAAAA 58.718 50.000 12.13 0.00 0.00 1.52
441 442 1.208776 GAAGCTAGCCGAACCCCTAAA 59.791 52.381 12.13 0.00 0.00 1.85
442 443 0.828677 GAAGCTAGCCGAACCCCTAA 59.171 55.000 12.13 0.00 0.00 2.69
443 444 1.047034 GGAAGCTAGCCGAACCCCTA 61.047 60.000 12.13 0.00 0.00 3.53
444 445 2.368011 GGAAGCTAGCCGAACCCCT 61.368 63.158 12.13 0.00 0.00 4.79
445 446 2.189784 GGAAGCTAGCCGAACCCC 59.810 66.667 12.13 0.00 0.00 4.95
452 453 2.685850 TCTTTAACCGGAAGCTAGCC 57.314 50.000 9.46 0.00 0.00 3.93
453 454 3.597255 ACTTCTTTAACCGGAAGCTAGC 58.403 45.455 9.46 6.62 41.64 3.42
454 455 7.360691 GGTTTTACTTCTTTAACCGGAAGCTAG 60.361 40.741 9.46 5.23 41.64 3.42
455 456 6.427853 GGTTTTACTTCTTTAACCGGAAGCTA 59.572 38.462 9.46 0.00 41.64 3.32
456 457 5.240183 GGTTTTACTTCTTTAACCGGAAGCT 59.760 40.000 9.46 0.00 41.64 3.74
457 458 5.455392 GGTTTTACTTCTTTAACCGGAAGC 58.545 41.667 9.46 0.00 41.64 3.86
463 464 9.518906 TGAAAATTCGGTTTTACTTCTTTAACC 57.481 29.630 0.00 0.00 40.04 2.85
466 467 9.940166 GAGTGAAAATTCGGTTTTACTTCTTTA 57.060 29.630 6.21 0.00 40.04 1.85
467 468 7.919091 GGAGTGAAAATTCGGTTTTACTTCTTT 59.081 33.333 6.21 0.00 40.04 2.52
468 469 7.284716 AGGAGTGAAAATTCGGTTTTACTTCTT 59.715 33.333 6.90 0.00 40.04 2.52
469 470 6.771267 AGGAGTGAAAATTCGGTTTTACTTCT 59.229 34.615 6.90 6.90 40.04 2.85
470 471 6.967135 AGGAGTGAAAATTCGGTTTTACTTC 58.033 36.000 6.21 4.91 40.04 3.01
471 472 6.771267 AGAGGAGTGAAAATTCGGTTTTACTT 59.229 34.615 6.21 0.00 40.04 2.24
472 473 6.296803 AGAGGAGTGAAAATTCGGTTTTACT 58.703 36.000 4.91 4.91 40.04 2.24
473 474 6.555812 AGAGGAGTGAAAATTCGGTTTTAC 57.444 37.500 0.49 0.00 40.04 2.01
474 475 7.716123 TGTTAGAGGAGTGAAAATTCGGTTTTA 59.284 33.333 0.49 0.00 40.04 1.52
475 476 6.544564 TGTTAGAGGAGTGAAAATTCGGTTTT 59.455 34.615 0.11 0.11 42.56 2.43
476 477 6.059484 TGTTAGAGGAGTGAAAATTCGGTTT 58.941 36.000 0.00 0.00 0.00 3.27
477 478 5.617252 TGTTAGAGGAGTGAAAATTCGGTT 58.383 37.500 0.00 0.00 0.00 4.44
478 479 5.011738 TCTGTTAGAGGAGTGAAAATTCGGT 59.988 40.000 0.00 0.00 0.00 4.69
479 480 5.479306 TCTGTTAGAGGAGTGAAAATTCGG 58.521 41.667 0.00 0.00 0.00 4.30
480 481 8.879342 ATATCTGTTAGAGGAGTGAAAATTCG 57.121 34.615 0.00 0.00 0.00 3.34
483 484 8.875168 CCCTATATCTGTTAGAGGAGTGAAAAT 58.125 37.037 7.78 0.00 41.13 1.82
484 485 7.290248 CCCCTATATCTGTTAGAGGAGTGAAAA 59.710 40.741 7.78 0.00 41.13 2.29
485 486 6.782988 CCCCTATATCTGTTAGAGGAGTGAAA 59.217 42.308 7.78 0.00 41.13 2.69
486 487 6.315714 CCCCTATATCTGTTAGAGGAGTGAA 58.684 44.000 7.78 0.00 41.13 3.18
487 488 5.222358 CCCCCTATATCTGTTAGAGGAGTGA 60.222 48.000 7.78 0.00 41.13 3.41
488 489 5.020132 CCCCCTATATCTGTTAGAGGAGTG 58.980 50.000 7.78 0.00 41.13 3.51
489 490 4.675550 ACCCCCTATATCTGTTAGAGGAGT 59.324 45.833 7.78 3.21 41.13 3.85
490 491 5.265989 GACCCCCTATATCTGTTAGAGGAG 58.734 50.000 7.78 2.70 41.13 3.69
491 492 4.263816 CGACCCCCTATATCTGTTAGAGGA 60.264 50.000 7.78 0.00 41.13 3.71
492 493 4.017808 CGACCCCCTATATCTGTTAGAGG 58.982 52.174 0.40 0.40 38.77 3.69
493 494 4.017808 CCGACCCCCTATATCTGTTAGAG 58.982 52.174 0.00 0.00 0.00 2.43
494 495 3.400322 ACCGACCCCCTATATCTGTTAGA 59.600 47.826 0.00 0.00 0.00 2.10
495 496 3.775910 ACCGACCCCCTATATCTGTTAG 58.224 50.000 0.00 0.00 0.00 2.34
496 497 3.909427 ACCGACCCCCTATATCTGTTA 57.091 47.619 0.00 0.00 0.00 2.41
497 498 2.789323 ACCGACCCCCTATATCTGTT 57.211 50.000 0.00 0.00 0.00 3.16
498 499 2.789323 AACCGACCCCCTATATCTGT 57.211 50.000 0.00 0.00 0.00 3.41
499 500 4.017808 CTCTAACCGACCCCCTATATCTG 58.982 52.174 0.00 0.00 0.00 2.90
500 501 3.921486 TCTCTAACCGACCCCCTATATCT 59.079 47.826 0.00 0.00 0.00 1.98
501 502 4.313020 TCTCTAACCGACCCCCTATATC 57.687 50.000 0.00 0.00 0.00 1.63
502 503 4.611367 CATCTCTAACCGACCCCCTATAT 58.389 47.826 0.00 0.00 0.00 0.86
503 504 3.816842 GCATCTCTAACCGACCCCCTATA 60.817 52.174 0.00 0.00 0.00 1.31
504 505 2.890814 CATCTCTAACCGACCCCCTAT 58.109 52.381 0.00 0.00 0.00 2.57
505 506 1.756690 GCATCTCTAACCGACCCCCTA 60.757 57.143 0.00 0.00 0.00 3.53
506 507 1.049289 GCATCTCTAACCGACCCCCT 61.049 60.000 0.00 0.00 0.00 4.79
507 508 1.446366 GCATCTCTAACCGACCCCC 59.554 63.158 0.00 0.00 0.00 5.40
508 509 1.049289 AGGCATCTCTAACCGACCCC 61.049 60.000 0.00 0.00 0.00 4.95
509 510 0.831307 AAGGCATCTCTAACCGACCC 59.169 55.000 0.00 0.00 0.00 4.46
510 511 3.718815 CTTAAGGCATCTCTAACCGACC 58.281 50.000 0.00 0.00 0.00 4.79
511 512 3.124560 GCTTAAGGCATCTCTAACCGAC 58.875 50.000 4.29 0.00 41.35 4.79
512 513 3.031736 AGCTTAAGGCATCTCTAACCGA 58.968 45.455 4.29 0.00 44.79 4.69
513 514 3.460857 AGCTTAAGGCATCTCTAACCG 57.539 47.619 4.29 0.00 44.79 4.44
514 515 5.069251 TGACTAGCTTAAGGCATCTCTAACC 59.931 44.000 4.29 0.00 44.79 2.85
515 516 5.980715 GTGACTAGCTTAAGGCATCTCTAAC 59.019 44.000 4.29 0.00 44.79 2.34
516 517 5.656859 TGTGACTAGCTTAAGGCATCTCTAA 59.343 40.000 4.29 0.00 44.79 2.10
517 518 5.201243 TGTGACTAGCTTAAGGCATCTCTA 58.799 41.667 4.29 0.00 44.79 2.43
518 519 4.026744 TGTGACTAGCTTAAGGCATCTCT 58.973 43.478 4.29 0.00 44.79 3.10
519 520 4.392921 TGTGACTAGCTTAAGGCATCTC 57.607 45.455 4.29 0.00 44.79 2.75
520 521 4.701765 CATGTGACTAGCTTAAGGCATCT 58.298 43.478 4.29 0.00 44.79 2.90
521 522 3.249559 GCATGTGACTAGCTTAAGGCATC 59.750 47.826 4.29 0.00 44.79 3.91
522 523 3.209410 GCATGTGACTAGCTTAAGGCAT 58.791 45.455 4.29 0.00 44.79 4.40
523 524 2.027285 TGCATGTGACTAGCTTAAGGCA 60.027 45.455 4.29 0.00 44.79 4.75
524 525 2.632377 TGCATGTGACTAGCTTAAGGC 58.368 47.619 4.29 0.00 42.19 4.35
525 526 5.359756 TGTATGCATGTGACTAGCTTAAGG 58.640 41.667 10.16 0.00 0.00 2.69
526 527 6.238211 GGTTGTATGCATGTGACTAGCTTAAG 60.238 42.308 10.16 0.00 0.00 1.85
527 528 5.584649 GGTTGTATGCATGTGACTAGCTTAA 59.415 40.000 10.16 0.00 0.00 1.85
528 529 5.116180 GGTTGTATGCATGTGACTAGCTTA 58.884 41.667 10.16 0.00 0.00 3.09
529 530 3.941483 GGTTGTATGCATGTGACTAGCTT 59.059 43.478 10.16 0.00 0.00 3.74
530 531 3.055167 TGGTTGTATGCATGTGACTAGCT 60.055 43.478 10.16 0.00 0.00 3.32
531 532 3.270027 TGGTTGTATGCATGTGACTAGC 58.730 45.455 10.16 7.09 0.00 3.42
532 533 4.877823 ACATGGTTGTATGCATGTGACTAG 59.122 41.667 10.16 0.00 36.96 2.57
533 534 4.842574 ACATGGTTGTATGCATGTGACTA 58.157 39.130 10.16 3.15 36.96 2.59
534 535 3.689347 ACATGGTTGTATGCATGTGACT 58.311 40.909 10.16 0.00 36.96 3.41
535 536 3.691118 AGACATGGTTGTATGCATGTGAC 59.309 43.478 10.16 0.00 38.25 3.67
536 537 3.954200 AGACATGGTTGTATGCATGTGA 58.046 40.909 10.16 0.00 38.25 3.58
537 538 4.707030 AAGACATGGTTGTATGCATGTG 57.293 40.909 10.16 0.00 38.25 3.21
538 539 4.158394 GGAAAGACATGGTTGTATGCATGT 59.842 41.667 10.16 0.00 40.49 3.21
539 540 4.440525 GGGAAAGACATGGTTGTATGCATG 60.441 45.833 10.16 0.00 35.79 4.06
540 541 3.701040 GGGAAAGACATGGTTGTATGCAT 59.299 43.478 3.79 3.79 35.79 3.96
541 542 3.088532 GGGAAAGACATGGTTGTATGCA 58.911 45.455 0.00 0.00 35.79 3.96
542 543 3.356290 AGGGAAAGACATGGTTGTATGC 58.644 45.455 0.00 0.00 35.79 3.14
543 544 4.848357 AGAGGGAAAGACATGGTTGTATG 58.152 43.478 0.00 0.00 35.79 2.39
544 545 5.520748 AAGAGGGAAAGACATGGTTGTAT 57.479 39.130 0.00 0.00 35.79 2.29
545 546 4.993705 AAGAGGGAAAGACATGGTTGTA 57.006 40.909 0.00 0.00 35.79 2.41
546 547 3.884037 AAGAGGGAAAGACATGGTTGT 57.116 42.857 0.00 0.00 39.32 3.32
547 548 4.829492 AGAAAAGAGGGAAAGACATGGTTG 59.171 41.667 0.00 0.00 0.00 3.77
548 549 5.066913 AGAAAAGAGGGAAAGACATGGTT 57.933 39.130 0.00 0.00 0.00 3.67
549 550 4.352298 AGAGAAAAGAGGGAAAGACATGGT 59.648 41.667 0.00 0.00 0.00 3.55
550 551 4.699257 CAGAGAAAAGAGGGAAAGACATGG 59.301 45.833 0.00 0.00 0.00 3.66
551 552 5.555017 TCAGAGAAAAGAGGGAAAGACATG 58.445 41.667 0.00 0.00 0.00 3.21
552 553 5.832539 TCAGAGAAAAGAGGGAAAGACAT 57.167 39.130 0.00 0.00 0.00 3.06
553 554 5.366768 TCTTCAGAGAAAAGAGGGAAAGACA 59.633 40.000 0.00 0.00 0.00 3.41
554 555 5.699001 GTCTTCAGAGAAAAGAGGGAAAGAC 59.301 44.000 0.00 0.00 33.57 3.01
555 556 5.604650 AGTCTTCAGAGAAAAGAGGGAAAGA 59.395 40.000 0.00 0.00 33.57 2.52
556 557 5.863965 AGTCTTCAGAGAAAAGAGGGAAAG 58.136 41.667 0.00 0.00 33.57 2.62
557 558 5.896073 AGTCTTCAGAGAAAAGAGGGAAA 57.104 39.130 0.00 0.00 33.57 3.13
558 559 7.674348 TGTATAGTCTTCAGAGAAAAGAGGGAA 59.326 37.037 0.00 0.00 33.57 3.97
559 560 7.122948 GTGTATAGTCTTCAGAGAAAAGAGGGA 59.877 40.741 0.00 0.00 33.57 4.20
560 561 7.093727 TGTGTATAGTCTTCAGAGAAAAGAGGG 60.094 40.741 0.00 0.00 33.57 4.30
561 562 7.831753 TGTGTATAGTCTTCAGAGAAAAGAGG 58.168 38.462 0.00 0.00 33.57 3.69
562 563 7.487829 GCTGTGTATAGTCTTCAGAGAAAAGAG 59.512 40.741 0.00 0.00 33.57 2.85
563 564 7.316640 GCTGTGTATAGTCTTCAGAGAAAAGA 58.683 38.462 0.00 0.00 32.66 2.52
564 565 6.533367 GGCTGTGTATAGTCTTCAGAGAAAAG 59.467 42.308 0.00 0.00 32.66 2.27
565 566 6.014584 TGGCTGTGTATAGTCTTCAGAGAAAA 60.015 38.462 0.00 0.00 32.66 2.29
566 567 5.480422 TGGCTGTGTATAGTCTTCAGAGAAA 59.520 40.000 0.00 0.00 32.66 2.52
567 568 5.016831 TGGCTGTGTATAGTCTTCAGAGAA 58.983 41.667 0.00 0.00 32.66 2.87
568 569 4.600062 TGGCTGTGTATAGTCTTCAGAGA 58.400 43.478 0.00 0.00 0.00 3.10
569 570 4.991153 TGGCTGTGTATAGTCTTCAGAG 57.009 45.455 0.00 0.00 0.00 3.35
570 571 4.442052 GCATGGCTGTGTATAGTCTTCAGA 60.442 45.833 0.00 0.00 0.00 3.27
571 572 3.806521 GCATGGCTGTGTATAGTCTTCAG 59.193 47.826 0.00 0.00 0.00 3.02
572 573 3.452264 AGCATGGCTGTGTATAGTCTTCA 59.548 43.478 0.00 0.00 37.57 3.02
573 574 4.065321 AGCATGGCTGTGTATAGTCTTC 57.935 45.455 0.00 0.00 37.57 2.87
586 587 4.826274 TCTTAGTTACTTCAGCATGGCT 57.174 40.909 0.00 0.00 40.77 4.75
587 588 4.333926 CCTTCTTAGTTACTTCAGCATGGC 59.666 45.833 0.00 0.00 36.16 4.40
610 611 0.680921 ATACACAGCACATGGGGCAC 60.681 55.000 13.20 0.00 36.22 5.01
612 613 2.276732 ATATACACAGCACATGGGGC 57.723 50.000 0.00 0.00 36.22 5.80
713 769 0.323629 GGAAGTCCACGGTCCATTCA 59.676 55.000 0.00 0.00 35.64 2.57
750 809 1.468985 ACGATGGTGAGAGAGACCTG 58.531 55.000 0.00 0.00 34.26 4.00
776 837 5.975344 GGTTGATGATGTCGACGAACTATAA 59.025 40.000 11.62 0.00 41.44 0.98
829 899 5.651387 AGCCATAGCCTTCTTTTCTTTTC 57.349 39.130 0.00 0.00 41.25 2.29
844 914 1.221414 GCAACCGAAGCTAGCCATAG 58.779 55.000 12.13 0.94 0.00 2.23
847 917 2.046314 GGCAACCGAAGCTAGCCA 60.046 61.111 12.13 0.00 44.59 4.75
939 1016 3.297830 TGCGAACGTGCATATATAGCT 57.702 42.857 0.00 0.00 40.62 3.32
954 1031 1.529010 GATGGGGGATGCATGCGAA 60.529 57.895 14.09 0.00 0.00 4.70
961 1038 2.203351 GGTTCCGATGGGGGATGC 60.203 66.667 0.00 0.00 35.62 3.91
962 1039 2.515901 GGGTTCCGATGGGGGATG 59.484 66.667 0.00 0.00 35.62 3.51
963 1040 2.776963 GGGGTTCCGATGGGGGAT 60.777 66.667 0.00 0.00 35.62 3.85
971 1048 0.616371 CTAATGTGTGGGGGTTCCGA 59.384 55.000 0.00 0.00 38.76 4.55
977 1054 0.625849 AGGAAGCTAATGTGTGGGGG 59.374 55.000 0.00 0.00 0.00 5.40
1052 1133 2.101917 CAGGTCATCAATGGAAATGGGC 59.898 50.000 0.00 0.00 0.00 5.36
1070 1151 2.795297 GGTCGAGTCTCGCTCAGG 59.205 66.667 17.61 0.00 44.33 3.86
1111 1196 1.069823 GACCAGGTGATGCTCGATCAT 59.930 52.381 0.43 0.43 43.20 2.45
1202 1290 2.511373 CCGCACATGAAGCCGCTA 60.511 61.111 0.00 0.00 0.00 4.26
1234 1322 0.752743 AGGGCGCATAATGCACACAT 60.753 50.000 10.83 0.00 45.36 3.21
1239 1327 0.250295 GAGGTAGGGCGCATAATGCA 60.250 55.000 10.83 0.00 45.36 3.96
1240 1328 1.291877 CGAGGTAGGGCGCATAATGC 61.292 60.000 10.83 0.00 40.69 3.56
1241 1329 0.317160 TCGAGGTAGGGCGCATAATG 59.683 55.000 10.83 0.00 0.00 1.90
1242 1330 1.204941 GATCGAGGTAGGGCGCATAAT 59.795 52.381 10.83 0.00 0.00 1.28
1243 1331 0.601558 GATCGAGGTAGGGCGCATAA 59.398 55.000 10.83 0.00 0.00 1.90
1245 1333 2.920645 CGATCGAGGTAGGGCGCAT 61.921 63.158 10.26 0.00 0.00 4.73
1246 1334 3.592814 CGATCGAGGTAGGGCGCA 61.593 66.667 10.26 0.00 0.00 6.09
1290 1378 1.137872 AGATCCGTCAACTGGCAGATC 59.862 52.381 23.66 11.80 0.00 2.75
1304 1396 1.938577 CACAGCCATCAAAGAGATCCG 59.061 52.381 0.00 0.00 33.72 4.18
1332 1424 2.045045 CCGGGCCTCTGCATCAAA 60.045 61.111 0.84 0.00 40.13 2.69
1471 1570 5.300752 CCAGTGGCTAGTAATTGTCTATGG 58.699 45.833 0.00 0.00 0.00 2.74
1519 1618 1.809619 GGACGACGCAGCTGCATAA 60.810 57.895 36.03 0.00 42.21 1.90
1567 1672 2.758089 GCTGAATCTGGGTGCGCTG 61.758 63.158 9.73 0.00 0.00 5.18
1575 1680 0.325933 TGAGGTGGTGCTGAATCTGG 59.674 55.000 0.00 0.00 0.00 3.86
1649 1759 8.978539 GTGCGATATTATCATCAGAAACAGTTA 58.021 33.333 4.63 0.00 0.00 2.24
1720 1830 2.655364 CCGGCAGCGACGATGTAG 60.655 66.667 15.31 8.78 35.20 2.74
1810 1920 3.726144 GAGGGGAAGCTGCAGCCT 61.726 66.667 34.39 23.76 43.38 4.58
1828 1938 1.075896 GGAGGAGGTGGAGGACGAT 60.076 63.158 0.00 0.00 0.00 3.73
2374 4464 4.082571 TCAAAGAACGTGCTACTACCCTAC 60.083 45.833 0.00 0.00 0.00 3.18
2375 4465 4.081406 TCAAAGAACGTGCTACTACCCTA 58.919 43.478 0.00 0.00 0.00 3.53
2376 4466 2.895404 TCAAAGAACGTGCTACTACCCT 59.105 45.455 0.00 0.00 0.00 4.34
2377 4467 2.991866 GTCAAAGAACGTGCTACTACCC 59.008 50.000 0.00 0.00 0.00 3.69
2378 4468 3.910648 AGTCAAAGAACGTGCTACTACC 58.089 45.455 0.00 0.00 0.00 3.18
2379 4469 4.558080 GCTAGTCAAAGAACGTGCTACTAC 59.442 45.833 0.00 0.00 0.00 2.73
2380 4470 4.458295 AGCTAGTCAAAGAACGTGCTACTA 59.542 41.667 0.00 0.00 33.28 1.82
2416 4512 3.246619 GTCCTTCTGTAAAGCGAGACAG 58.753 50.000 8.19 8.19 43.70 3.51
2434 4558 3.064958 TGATCAGTATCGACGTCTTGTCC 59.935 47.826 14.70 0.00 45.23 4.02
2560 4687 3.271014 TCGTCTTCTTCGACCCGG 58.729 61.111 0.00 0.00 32.30 5.73
3017 5254 1.525077 GACACGTCCACTGGCCAAA 60.525 57.895 7.01 0.00 0.00 3.28
3109 5358 4.655186 AGGTAACCTGGTACACACACTTAA 59.345 41.667 0.00 0.00 29.57 1.85
3164 5417 1.604755 TGCGCTACGTTGGTCATTTTT 59.395 42.857 9.73 0.00 0.00 1.94
3207 5460 8.175069 GCGTTACTACTTTTCATCATCATTGAA 58.825 33.333 0.00 0.00 34.96 2.69
3208 5461 7.333174 TGCGTTACTACTTTTCATCATCATTGA 59.667 33.333 0.00 0.00 36.00 2.57
3242 5498 5.336990 CAGAATTTAAAAAGAGTGTGACGCG 59.663 40.000 3.53 3.53 0.00 6.01
3243 5499 5.115622 GCAGAATTTAAAAAGAGTGTGACGC 59.884 40.000 0.00 0.00 0.00 5.19
3244 5500 6.198687 TGCAGAATTTAAAAAGAGTGTGACG 58.801 36.000 0.00 0.00 0.00 4.35
3245 5501 9.334693 CTATGCAGAATTTAAAAAGAGTGTGAC 57.665 33.333 0.00 0.00 0.00 3.67
3755 6353 6.365520 ACAGTCTCCCTAACAAAATCAAAGT 58.634 36.000 0.00 0.00 0.00 2.66
3892 6492 3.360340 GAGTGGCAGCTGGTGTGC 61.360 66.667 17.12 0.13 40.42 4.57
3961 6702 1.600957 GTAGCTCGTGTACGCTATGGA 59.399 52.381 4.67 0.00 40.47 3.41
4103 6893 6.541934 AAGGTTACTGTTATCCTCTACACC 57.458 41.667 0.00 0.00 0.00 4.16
4457 7258 5.222631 CAATCCTTTTGTTAACTGTGGCTC 58.777 41.667 7.22 0.00 0.00 4.70
4470 7283 2.368221 TGAAGTTGGCCCAATCCTTTTG 59.632 45.455 0.00 0.00 0.00 2.44
4471 7284 2.688477 TGAAGTTGGCCCAATCCTTTT 58.312 42.857 0.00 0.00 0.00 2.27
4472 7285 2.397044 TGAAGTTGGCCCAATCCTTT 57.603 45.000 0.00 0.00 0.00 3.11
4473 7286 2.397044 TTGAAGTTGGCCCAATCCTT 57.603 45.000 0.00 0.00 0.00 3.36
4474 7287 2.397044 TTTGAAGTTGGCCCAATCCT 57.603 45.000 0.00 0.00 0.00 3.24
4475 7288 3.483808 TTTTTGAAGTTGGCCCAATCC 57.516 42.857 0.00 0.00 0.00 3.01
4495 7308 3.457749 TGAGGCCCAATCCTTTTGTTTTT 59.542 39.130 0.00 0.00 36.38 1.94
4496 7309 3.044894 TGAGGCCCAATCCTTTTGTTTT 58.955 40.909 0.00 0.00 36.38 2.43
4497 7310 2.688477 TGAGGCCCAATCCTTTTGTTT 58.312 42.857 0.00 0.00 36.38 2.83
4655 7502 1.993370 GTGCAAGTTCTTATCGCGAGT 59.007 47.619 16.66 5.59 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.