Multiple sequence alignment - TraesCS3B01G122400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G122400 chr3B 100.000 5922 0 0 1 5922 92336355 92330434 0.000000e+00 10936.0
1 TraesCS3B01G122400 chr3B 83.651 997 115 22 2241 3206 172318707 172317728 0.000000e+00 894.0
2 TraesCS3B01G122400 chr3B 83.367 986 101 34 3534 4502 172317690 172316751 0.000000e+00 854.0
3 TraesCS3B01G122400 chr3B 87.031 640 56 12 1412 2044 172319527 172318908 0.000000e+00 697.0
4 TraesCS3B01G122400 chr3B 96.795 312 10 0 3229 3540 2485025 2484714 6.800000e-144 521.0
5 TraesCS3B01G122400 chr3B 80.160 625 88 22 637 1238 172320213 172319602 9.110000e-118 435.0
6 TraesCS3B01G122400 chr3B 79.810 421 47 16 4845 5244 172316518 172316115 7.560000e-69 272.0
7 TraesCS3B01G122400 chr3B 87.027 185 19 3 4650 4833 172316747 172316567 2.800000e-48 204.0
8 TraesCS3B01G122400 chr3B 81.102 127 22 1 5462 5586 821439242 821439116 3.780000e-17 100.0
9 TraesCS3B01G122400 chr3B 80.315 127 23 1 5462 5586 821289821 821289695 1.760000e-15 95.3
10 TraesCS3B01G122400 chr3D 94.474 2624 95 15 642 3229 58302623 58300014 0.000000e+00 3997.0
11 TraesCS3B01G122400 chr3D 94.944 2314 84 18 3534 5823 58300016 58297712 0.000000e+00 3594.0
12 TraesCS3B01G122400 chr3D 83.667 998 110 25 2241 3206 120292024 120291048 0.000000e+00 891.0
13 TraesCS3B01G122400 chr3D 87.981 624 54 8 1412 2034 120292832 120292229 0.000000e+00 717.0
14 TraesCS3B01G122400 chr3D 90.088 454 33 5 4069 4521 120290437 120289995 3.980000e-161 579.0
15 TraesCS3B01G122400 chr3D 81.300 631 80 25 679 1282 120293466 120292847 1.490000e-130 477.0
16 TraesCS3B01G122400 chr3D 83.684 190 20 3 1533 1722 58306585 58306763 1.020000e-37 169.0
17 TraesCS3B01G122400 chr3A 94.529 2614 90 12 644 3229 67314445 67311857 0.000000e+00 3986.0
18 TraesCS3B01G122400 chr3A 94.722 1781 74 10 3534 5308 67311859 67310093 0.000000e+00 2750.0
19 TraesCS3B01G122400 chr3A 92.958 639 36 6 1 638 701890127 701890757 0.000000e+00 922.0
20 TraesCS3B01G122400 chr3A 82.949 997 109 29 2241 3206 127194695 127193729 0.000000e+00 843.0
21 TraesCS3B01G122400 chr3A 82.293 977 105 39 3534 4502 127193691 127192775 0.000000e+00 784.0
22 TraesCS3B01G122400 chr3A 87.031 640 57 15 1412 2045 127195514 127194895 0.000000e+00 699.0
23 TraesCS3B01G122400 chr3A 80.712 674 88 27 637 1282 127196188 127195529 2.480000e-133 486.0
24 TraesCS3B01G122400 chr3A 87.549 257 21 8 4529 4780 127192777 127192527 2.700000e-73 287.0
25 TraesCS3B01G122400 chr6B 93.260 638 34 6 1 637 267791358 267790729 0.000000e+00 931.0
26 TraesCS3B01G122400 chr6B 84.127 63 10 0 2320 2382 130965993 130966055 1.780000e-05 62.1
27 TraesCS3B01G122400 chr2A 93.260 638 34 6 1 637 159087963 159087334 0.000000e+00 931.0
28 TraesCS3B01G122400 chr2A 92.936 637 36 6 1 636 58367360 58366732 0.000000e+00 918.0
29 TraesCS3B01G122400 chr2A 92.936 637 36 6 1 636 737422307 737422935 0.000000e+00 918.0
30 TraesCS3B01G122400 chr2A 94.534 311 16 1 3229 3539 733160011 733160320 4.150000e-131 479.0
31 TraesCS3B01G122400 chr2A 94.498 309 17 0 3226 3534 777014412 777014720 1.490000e-130 477.0
32 TraesCS3B01G122400 chr2A 94.444 234 11 2 4427 4658 583094876 583095109 5.640000e-95 359.0
33 TraesCS3B01G122400 chr2A 94.017 234 12 1 4427 4658 583102463 583102696 2.630000e-93 353.0
34 TraesCS3B01G122400 chr1A 93.114 639 35 6 1 638 27376068 27376698 0.000000e+00 928.0
35 TraesCS3B01G122400 chr1A 95.410 305 14 0 3229 3533 527245684 527245988 2.480000e-133 486.0
36 TraesCS3B01G122400 chr1A 82.000 200 32 4 4225 4423 20996629 20996433 3.670000e-37 167.0
37 TraesCS3B01G122400 chr7A 93.093 637 35 6 1 636 88981467 88982095 0.000000e+00 924.0
38 TraesCS3B01G122400 chr7A 96.078 306 12 0 3228 3533 615488672 615488977 3.190000e-137 499.0
39 TraesCS3B01G122400 chr7A 82.323 198 31 4 4227 4423 20220697 20220891 1.020000e-37 169.0
40 TraesCS3B01G122400 chr4A 92.936 637 36 6 1 636 662088742 662088114 0.000000e+00 918.0
41 TraesCS3B01G122400 chr4A 95.395 304 14 0 3229 3532 129837188 129836885 8.920000e-133 484.0
42 TraesCS3B01G122400 chr7B 92.801 639 36 7 1 637 41531145 41531775 0.000000e+00 917.0
43 TraesCS3B01G122400 chr7B 77.989 368 74 6 5408 5770 511943272 511943637 2.150000e-54 224.0
44 TraesCS3B01G122400 chr2B 98.039 306 4 2 3229 3534 35398879 35398576 1.130000e-146 531.0
45 TraesCS3B01G122400 chrUn 93.987 316 17 2 3227 3542 56924659 56924346 1.490000e-130 477.0
46 TraesCS3B01G122400 chrUn 94.805 231 10 2 4427 4655 315294816 315295046 5.640000e-95 359.0
47 TraesCS3B01G122400 chr4D 93.968 315 17 2 3230 3544 56741429 56741117 5.370000e-130 475.0
48 TraesCS3B01G122400 chr7D 81.773 203 33 4 4222 4423 262706557 262706756 3.670000e-37 167.0
49 TraesCS3B01G122400 chr6D 84.375 64 8 2 2320 2382 58447277 58447339 1.780000e-05 62.1
50 TraesCS3B01G122400 chr6A 84.127 63 10 0 2320 2382 73639843 73639905 1.780000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G122400 chr3B 92330434 92336355 5921 True 10936.000000 10936 100.000000 1 5922 1 chr3B.!!$R2 5921
1 TraesCS3B01G122400 chr3B 172316115 172320213 4098 True 559.333333 894 83.507667 637 5244 6 chr3B.!!$R5 4607
2 TraesCS3B01G122400 chr3D 58297712 58302623 4911 True 3795.500000 3997 94.709000 642 5823 2 chr3D.!!$R1 5181
3 TraesCS3B01G122400 chr3D 120289995 120293466 3471 True 666.000000 891 85.759000 679 4521 4 chr3D.!!$R2 3842
4 TraesCS3B01G122400 chr3A 67310093 67314445 4352 True 3368.000000 3986 94.625500 644 5308 2 chr3A.!!$R1 4664
5 TraesCS3B01G122400 chr3A 701890127 701890757 630 False 922.000000 922 92.958000 1 638 1 chr3A.!!$F1 637
6 TraesCS3B01G122400 chr3A 127192527 127196188 3661 True 619.800000 843 84.106800 637 4780 5 chr3A.!!$R2 4143
7 TraesCS3B01G122400 chr6B 267790729 267791358 629 True 931.000000 931 93.260000 1 637 1 chr6B.!!$R1 636
8 TraesCS3B01G122400 chr2A 159087334 159087963 629 True 931.000000 931 93.260000 1 637 1 chr2A.!!$R2 636
9 TraesCS3B01G122400 chr2A 58366732 58367360 628 True 918.000000 918 92.936000 1 636 1 chr2A.!!$R1 635
10 TraesCS3B01G122400 chr2A 737422307 737422935 628 False 918.000000 918 92.936000 1 636 1 chr2A.!!$F4 635
11 TraesCS3B01G122400 chr1A 27376068 27376698 630 False 928.000000 928 93.114000 1 638 1 chr1A.!!$F1 637
12 TraesCS3B01G122400 chr7A 88981467 88982095 628 False 924.000000 924 93.093000 1 636 1 chr7A.!!$F2 635
13 TraesCS3B01G122400 chr4A 662088114 662088742 628 True 918.000000 918 92.936000 1 636 1 chr4A.!!$R2 635
14 TraesCS3B01G122400 chr7B 41531145 41531775 630 False 917.000000 917 92.801000 1 637 1 chr7B.!!$F1 636

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
583 585 0.315568 GCGCTCCTATCAACCGAGAT 59.684 55.000 0.00 0.00 0.00 2.75 F
640 642 1.599047 CGAGGTCCTTGACAGCCAT 59.401 57.895 0.00 0.00 33.68 4.40 F
1120 1155 1.742761 AATCAGATGGTGGAAGTGCG 58.257 50.000 0.00 0.00 0.00 5.34 F
1852 1917 2.618816 CCTGCTGCAGGTCCAGAATTTA 60.619 50.000 35.03 0.00 45.82 1.40 F
3162 3310 1.153353 TTCGCATGAACTCCGGAAAC 58.847 50.000 5.23 0.00 0.00 2.78 F
3296 3461 0.106519 ATAGGGTTGGAGTGGCATGC 60.107 55.000 9.90 9.90 0.00 4.06 F
3301 3466 0.388659 GTTGGAGTGGCATGCACAAA 59.611 50.000 21.36 4.67 0.00 2.83 F
3303 3468 0.604073 TGGAGTGGCATGCACAAATG 59.396 50.000 21.36 0.00 0.00 2.32 F
4254 4549 0.601558 CTCCTTTCACTCCGTCGGAA 59.398 55.000 16.23 0.00 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1910 1975 1.201343 GGTTCTATTCTCGCACGAGC 58.799 55.000 15.04 0.0 41.71 5.03 R
2461 2576 1.926511 GCATTGGAGCCAGTGGAACG 61.927 60.000 15.20 0.0 45.86 3.95 R
3065 3213 2.480073 CCACAAACCATCGGATCAATGC 60.480 50.000 0.00 0.0 0.00 3.56 R
3277 3442 0.106519 GCATGCCACTCCAACCCTAT 60.107 55.000 6.36 0.0 0.00 2.57 R
4229 4524 0.036010 CGGAGTGAAAGGAGCATGGT 60.036 55.000 0.00 0.0 0.00 3.55 R
4230 4525 0.036010 ACGGAGTGAAAGGAGCATGG 60.036 55.000 0.00 0.0 42.51 3.66 R
4254 4549 0.484212 CCATGGCCATCCCTGGTATT 59.516 55.000 17.61 0.0 45.10 1.89 R
4891 5229 1.202891 TCTTCGTCTGACTGAGTCCCA 60.203 52.381 10.52 0.0 0.00 4.37 R
5890 6265 0.107654 AAGTCTTGATAGGGCGGTGC 60.108 55.000 0.00 0.0 0.00 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 2.030562 ACGCCTCCAACTTCACCG 59.969 61.111 0.00 0.00 0.00 4.94
61 62 1.303317 GCCTCCAATCCACAACGGT 60.303 57.895 0.00 0.00 35.57 4.83
70 71 4.012895 CACAACGGTGCGGCTGTC 62.013 66.667 0.00 0.00 38.37 3.51
82 83 2.747686 GCTGTCCCGGAACCAGAA 59.252 61.111 16.20 0.00 0.00 3.02
103 104 3.843985 GTGACTCGTTCACGCCTC 58.156 61.111 4.54 0.00 45.33 4.70
142 143 1.303643 CCTTGTCCACTGGAAGGGC 60.304 63.158 7.69 0.00 34.45 5.19
145 146 2.111999 TTGTCCACTGGAAGGGCGAG 62.112 60.000 0.00 0.00 34.45 5.03
148 149 3.710722 CACTGGAAGGGCGAGGCT 61.711 66.667 0.00 0.00 39.30 4.58
160 161 4.819761 GAGGCTGCGTCATCGGCA 62.820 66.667 16.70 0.00 37.56 5.69
328 330 2.029666 GACGAGGCATGATCGGGG 59.970 66.667 20.45 0.00 44.36 5.73
343 345 2.930935 GGGGCAAGGAGTCCTGATA 58.069 57.895 13.89 0.00 43.45 2.15
378 380 5.130809 TCCTAGAGTCCAGGAGTAGTTAGTC 59.869 48.000 2.80 0.00 37.27 2.59
380 382 5.523883 AGAGTCCAGGAGTAGTTAGTCTT 57.476 43.478 0.00 0.00 0.00 3.01
381 383 5.258051 AGAGTCCAGGAGTAGTTAGTCTTG 58.742 45.833 0.00 0.48 33.84 3.02
382 384 5.014333 AGAGTCCAGGAGTAGTTAGTCTTGA 59.986 44.000 0.00 0.00 35.46 3.02
383 385 5.833340 AGTCCAGGAGTAGTTAGTCTTGAT 58.167 41.667 0.00 0.00 35.46 2.57
384 386 5.889289 AGTCCAGGAGTAGTTAGTCTTGATC 59.111 44.000 0.00 0.00 35.46 2.92
385 387 5.068067 GTCCAGGAGTAGTTAGTCTTGATCC 59.932 48.000 7.46 0.00 35.46 3.36
387 389 6.159928 TCCAGGAGTAGTTAGTCTTGATCCTA 59.840 42.308 7.46 0.00 35.46 2.94
388 390 6.263617 CCAGGAGTAGTTAGTCTTGATCCTAC 59.736 46.154 7.46 0.00 35.46 3.18
389 391 6.017770 CAGGAGTAGTTAGTCTTGATCCTACG 60.018 46.154 1.07 0.00 35.46 3.51
391 393 6.318396 GGAGTAGTTAGTCTTGATCCTACGTT 59.682 42.308 0.00 0.00 32.17 3.99
392 394 7.497249 GGAGTAGTTAGTCTTGATCCTACGTTA 59.503 40.741 0.00 0.00 32.17 3.18
393 395 8.436046 AGTAGTTAGTCTTGATCCTACGTTAG 57.564 38.462 0.00 0.00 32.17 2.34
394 396 8.046107 AGTAGTTAGTCTTGATCCTACGTTAGT 58.954 37.037 0.00 0.00 32.17 2.24
395 397 7.700022 AGTTAGTCTTGATCCTACGTTAGTT 57.300 36.000 0.00 0.00 0.00 2.24
396 398 7.760437 AGTTAGTCTTGATCCTACGTTAGTTC 58.240 38.462 0.00 0.00 0.00 3.01
397 399 5.579564 AGTCTTGATCCTACGTTAGTTCC 57.420 43.478 0.00 0.00 0.00 3.62
398 400 5.262804 AGTCTTGATCCTACGTTAGTTCCT 58.737 41.667 0.00 0.00 0.00 3.36
399 401 6.421485 AGTCTTGATCCTACGTTAGTTCCTA 58.579 40.000 0.00 0.00 0.00 2.94
419 421 5.130809 TCCTAGAGTCCAGGAGTAGTTAGTC 59.869 48.000 2.80 0.00 37.27 2.59
482 484 2.410322 ATCTGCACCCTTGGACGCAA 62.410 55.000 4.91 0.00 35.21 4.85
508 510 9.110382 AGCAATAAATCATTATCTCCTACCTCT 57.890 33.333 0.00 0.00 31.28 3.69
528 530 6.183361 ACCTCTTCCTCTACTCCTAATCTCTC 60.183 46.154 0.00 0.00 0.00 3.20
583 585 0.315568 GCGCTCCTATCAACCGAGAT 59.684 55.000 0.00 0.00 0.00 2.75
640 642 1.599047 CGAGGTCCTTGACAGCCAT 59.401 57.895 0.00 0.00 33.68 4.40
778 789 7.850501 ACGGAACAACAAATTTGAAAATCATC 58.149 30.769 24.64 11.80 0.00 2.92
795 806 6.403866 AATCATCAGCTTCCTAGTCTACAG 57.596 41.667 0.00 0.00 0.00 2.74
1120 1155 1.742761 AATCAGATGGTGGAAGTGCG 58.257 50.000 0.00 0.00 0.00 5.34
1221 1256 6.920569 ACAGCTTTTATCGGTAATTGGTAG 57.079 37.500 0.00 0.00 0.00 3.18
1247 1299 5.210715 CAACACGTCTATAGTTATCGGGTC 58.789 45.833 13.72 0.00 37.16 4.46
1356 1408 7.840342 CAGTTCTCTGTTATTCAGCATTAGT 57.160 36.000 0.00 0.00 43.32 2.24
1363 1415 6.156256 TCTGTTATTCAGCATTAGTGGTACCT 59.844 38.462 14.36 0.00 43.32 3.08
1365 1417 6.597672 TGTTATTCAGCATTAGTGGTACCTTG 59.402 38.462 14.36 4.44 34.05 3.61
1366 1418 4.901197 TTCAGCATTAGTGGTACCTTGA 57.099 40.909 14.36 0.00 34.05 3.02
1367 1419 4.202245 TCAGCATTAGTGGTACCTTGAC 57.798 45.455 14.36 2.79 34.05 3.18
1368 1420 3.055385 TCAGCATTAGTGGTACCTTGACC 60.055 47.826 14.36 0.00 40.21 4.02
1386 1438 3.251571 GACCAGTCAAGATACCGTTGTC 58.748 50.000 0.00 0.00 0.00 3.18
1559 1618 3.570125 TCCTACAGGATATTCAGAGCACG 59.430 47.826 0.00 0.00 39.78 5.34
1741 1800 5.859648 GTCTAGCTGTTGTTCTGTAGTCTTC 59.140 44.000 0.00 0.00 0.00 2.87
1852 1917 2.618816 CCTGCTGCAGGTCCAGAATTTA 60.619 50.000 35.03 0.00 45.82 1.40
1910 1975 4.962155 AGAGGTTGTTAGGACACTTTCTG 58.038 43.478 0.00 0.00 34.98 3.02
1939 2004 3.368427 CGAGAATAGAACCTGGCTTCACA 60.368 47.826 0.00 0.00 0.00 3.58
1950 2015 4.141344 ACCTGGCTTCACAACTTTAGGTAA 60.141 41.667 0.00 0.00 35.66 2.85
1951 2016 5.010282 CCTGGCTTCACAACTTTAGGTAAT 58.990 41.667 0.00 0.00 0.00 1.89
2053 2120 6.486253 TCTTTCATGTAATTCAGAGCACAC 57.514 37.500 0.00 0.00 0.00 3.82
2302 2416 7.225538 TCTGAAGTCTTTCTGCTTACTTTCTTG 59.774 37.037 0.00 0.00 32.51 3.02
2303 2417 7.047891 TGAAGTCTTTCTGCTTACTTTCTTGA 58.952 34.615 0.00 0.00 32.51 3.02
2304 2418 7.716998 TGAAGTCTTTCTGCTTACTTTCTTGAT 59.283 33.333 0.00 0.00 32.51 2.57
2461 2576 3.876914 TGAAATATCCAGCACATCCGAAC 59.123 43.478 0.00 0.00 0.00 3.95
2514 2629 2.770447 TCCTATGCCAGGTAATGTCCA 58.230 47.619 1.67 0.00 45.71 4.02
2654 2789 7.888250 ATCAGATATTTTTCTCCCCTTTCAC 57.112 36.000 0.00 0.00 0.00 3.18
2655 2790 7.032598 TCAGATATTTTTCTCCCCTTTCACT 57.967 36.000 0.00 0.00 0.00 3.41
2657 2792 7.950124 TCAGATATTTTTCTCCCCTTTCACTTT 59.050 33.333 0.00 0.00 0.00 2.66
2702 2840 8.407832 TGCAAGTCCACATCTTATATCAAAATG 58.592 33.333 0.00 0.00 0.00 2.32
2847 2988 6.321435 GGAGTAAAGGTCTTAAAATGATGGGG 59.679 42.308 0.00 0.00 0.00 4.96
3162 3310 1.153353 TTCGCATGAACTCCGGAAAC 58.847 50.000 5.23 0.00 0.00 2.78
3226 3391 4.410883 TCCTTCACGTGGGATATATTGGTT 59.589 41.667 17.00 0.00 0.00 3.67
3227 3392 5.104277 TCCTTCACGTGGGATATATTGGTTT 60.104 40.000 17.00 0.00 0.00 3.27
3228 3393 6.099990 TCCTTCACGTGGGATATATTGGTTTA 59.900 38.462 17.00 0.00 0.00 2.01
3229 3394 6.426937 CCTTCACGTGGGATATATTGGTTTAG 59.573 42.308 17.00 0.00 0.00 1.85
3230 3395 5.860611 TCACGTGGGATATATTGGTTTAGG 58.139 41.667 17.00 0.00 0.00 2.69
3231 3396 4.454504 CACGTGGGATATATTGGTTTAGGC 59.545 45.833 7.95 0.00 0.00 3.93
3232 3397 4.007659 CGTGGGATATATTGGTTTAGGCC 58.992 47.826 0.00 0.00 0.00 5.19
3233 3398 4.341487 GTGGGATATATTGGTTTAGGCCC 58.659 47.826 0.00 0.00 0.00 5.80
3234 3399 4.044191 GTGGGATATATTGGTTTAGGCCCT 59.956 45.833 0.00 0.00 34.18 5.19
3235 3400 4.291249 TGGGATATATTGGTTTAGGCCCTC 59.709 45.833 0.00 0.00 34.18 4.30
3236 3401 4.540502 GGGATATATTGGTTTAGGCCCTCT 59.459 45.833 0.00 0.00 0.00 3.69
3237 3402 5.015284 GGGATATATTGGTTTAGGCCCTCTT 59.985 44.000 0.00 0.00 0.00 2.85
3238 3403 6.468798 GGGATATATTGGTTTAGGCCCTCTTT 60.469 42.308 0.00 0.00 0.00 2.52
3239 3404 6.434340 GGATATATTGGTTTAGGCCCTCTTTG 59.566 42.308 0.00 0.00 0.00 2.77
3240 3405 3.825908 ATTGGTTTAGGCCCTCTTTGA 57.174 42.857 0.00 0.00 0.00 2.69
3241 3406 3.825908 TTGGTTTAGGCCCTCTTTGAT 57.174 42.857 0.00 0.00 0.00 2.57
3242 3407 3.825908 TGGTTTAGGCCCTCTTTGATT 57.174 42.857 0.00 0.00 0.00 2.57
3243 3408 3.697166 TGGTTTAGGCCCTCTTTGATTC 58.303 45.455 0.00 0.00 0.00 2.52
3244 3409 3.075283 TGGTTTAGGCCCTCTTTGATTCA 59.925 43.478 0.00 0.00 0.00 2.57
3245 3410 4.264352 TGGTTTAGGCCCTCTTTGATTCAT 60.264 41.667 0.00 0.00 0.00 2.57
3246 3411 5.044476 TGGTTTAGGCCCTCTTTGATTCATA 60.044 40.000 0.00 0.00 0.00 2.15
3247 3412 5.532779 GGTTTAGGCCCTCTTTGATTCATAG 59.467 44.000 0.00 0.00 0.00 2.23
3248 3413 3.872459 AGGCCCTCTTTGATTCATAGG 57.128 47.619 0.00 4.33 0.00 2.57
3249 3414 3.397527 AGGCCCTCTTTGATTCATAGGA 58.602 45.455 0.00 0.00 0.00 2.94
3250 3415 3.986134 AGGCCCTCTTTGATTCATAGGAT 59.014 43.478 0.00 0.00 0.00 3.24
3251 3416 4.418190 AGGCCCTCTTTGATTCATAGGATT 59.582 41.667 0.00 0.00 0.00 3.01
3252 3417 5.103344 AGGCCCTCTTTGATTCATAGGATTT 60.103 40.000 0.00 0.00 0.00 2.17
3253 3418 5.600069 GGCCCTCTTTGATTCATAGGATTTT 59.400 40.000 10.34 0.00 0.00 1.82
3254 3419 6.239148 GGCCCTCTTTGATTCATAGGATTTTC 60.239 42.308 10.34 0.00 0.00 2.29
3255 3420 6.322201 GCCCTCTTTGATTCATAGGATTTTCA 59.678 38.462 10.34 0.00 0.00 2.69
3256 3421 7.147846 GCCCTCTTTGATTCATAGGATTTTCAA 60.148 37.037 10.34 0.00 0.00 2.69
3257 3422 8.752187 CCCTCTTTGATTCATAGGATTTTCAAA 58.248 33.333 10.34 9.08 0.00 2.69
3272 3437 9.768215 AGGATTTTCAAAATGTAGGAATAGGAA 57.232 29.630 0.00 0.00 0.00 3.36
3283 3448 9.461734 AATGTAGGAATAGGAAAAGTATAGGGT 57.538 33.333 0.00 0.00 0.00 4.34
3284 3449 8.865244 TGTAGGAATAGGAAAAGTATAGGGTT 57.135 34.615 0.00 0.00 0.00 4.11
3285 3450 8.711170 TGTAGGAATAGGAAAAGTATAGGGTTG 58.289 37.037 0.00 0.00 0.00 3.77
3286 3451 7.150447 AGGAATAGGAAAAGTATAGGGTTGG 57.850 40.000 0.00 0.00 0.00 3.77
3287 3452 6.912561 AGGAATAGGAAAAGTATAGGGTTGGA 59.087 38.462 0.00 0.00 0.00 3.53
3288 3453 7.072581 AGGAATAGGAAAAGTATAGGGTTGGAG 59.927 40.741 0.00 0.00 0.00 3.86
3289 3454 7.147355 GGAATAGGAAAAGTATAGGGTTGGAGT 60.147 40.741 0.00 0.00 0.00 3.85
3290 3455 5.437191 AGGAAAAGTATAGGGTTGGAGTG 57.563 43.478 0.00 0.00 0.00 3.51
3291 3456 4.227527 AGGAAAAGTATAGGGTTGGAGTGG 59.772 45.833 0.00 0.00 0.00 4.00
3292 3457 3.646736 AAAGTATAGGGTTGGAGTGGC 57.353 47.619 0.00 0.00 0.00 5.01
3293 3458 2.263895 AGTATAGGGTTGGAGTGGCA 57.736 50.000 0.00 0.00 0.00 4.92
3294 3459 2.776665 AGTATAGGGTTGGAGTGGCAT 58.223 47.619 0.00 0.00 0.00 4.40
3295 3460 2.439507 AGTATAGGGTTGGAGTGGCATG 59.560 50.000 0.00 0.00 0.00 4.06
3296 3461 0.106519 ATAGGGTTGGAGTGGCATGC 60.107 55.000 9.90 9.90 0.00 4.06
3297 3462 1.496444 TAGGGTTGGAGTGGCATGCA 61.496 55.000 21.36 2.54 0.00 3.96
3298 3463 2.639327 GGGTTGGAGTGGCATGCAC 61.639 63.158 21.36 15.34 0.00 4.57
3299 3464 1.902918 GGTTGGAGTGGCATGCACA 60.903 57.895 21.36 12.37 0.00 4.57
3300 3465 1.462731 GGTTGGAGTGGCATGCACAA 61.463 55.000 21.36 12.69 0.00 3.33
3301 3466 0.388659 GTTGGAGTGGCATGCACAAA 59.611 50.000 21.36 4.67 0.00 2.83
3302 3467 1.001181 GTTGGAGTGGCATGCACAAAT 59.999 47.619 21.36 3.20 0.00 2.32
3303 3468 0.604073 TGGAGTGGCATGCACAAATG 59.396 50.000 21.36 0.00 0.00 2.32
3304 3469 0.889994 GGAGTGGCATGCACAAATGA 59.110 50.000 21.36 0.00 0.00 2.57
3305 3470 1.273048 GGAGTGGCATGCACAAATGAA 59.727 47.619 21.36 0.00 0.00 2.57
3306 3471 2.093869 GGAGTGGCATGCACAAATGAAT 60.094 45.455 21.36 0.00 0.00 2.57
3307 3472 3.184541 GAGTGGCATGCACAAATGAATC 58.815 45.455 21.36 4.24 0.00 2.52
3308 3473 2.093869 AGTGGCATGCACAAATGAATCC 60.094 45.455 21.36 0.00 0.00 3.01
3309 3474 2.093869 GTGGCATGCACAAATGAATCCT 60.094 45.455 21.36 0.00 0.00 3.24
3310 3475 3.130869 GTGGCATGCACAAATGAATCCTA 59.869 43.478 21.36 0.00 0.00 2.94
3311 3476 3.130869 TGGCATGCACAAATGAATCCTAC 59.869 43.478 21.36 0.00 0.00 3.18
3312 3477 3.130869 GGCATGCACAAATGAATCCTACA 59.869 43.478 21.36 0.00 0.00 2.74
3313 3478 4.357142 GCATGCACAAATGAATCCTACAG 58.643 43.478 14.21 0.00 0.00 2.74
3314 3479 4.735578 GCATGCACAAATGAATCCTACAGG 60.736 45.833 14.21 0.00 0.00 4.00
3328 3493 5.282055 TCCTACAGGATTAGCATGAAGTG 57.718 43.478 0.00 0.00 39.78 3.16
3329 3494 4.716784 TCCTACAGGATTAGCATGAAGTGT 59.283 41.667 0.00 0.00 39.78 3.55
3330 3495 5.189736 TCCTACAGGATTAGCATGAAGTGTT 59.810 40.000 0.00 0.00 39.78 3.32
3331 3496 5.882557 CCTACAGGATTAGCATGAAGTGTTT 59.117 40.000 0.00 0.00 37.39 2.83
3332 3497 5.633830 ACAGGATTAGCATGAAGTGTTTG 57.366 39.130 0.00 0.00 31.50 2.93
3333 3498 5.316167 ACAGGATTAGCATGAAGTGTTTGA 58.684 37.500 0.00 0.00 31.50 2.69
3334 3499 5.948162 ACAGGATTAGCATGAAGTGTTTGAT 59.052 36.000 0.00 0.00 31.50 2.57
3335 3500 6.127814 ACAGGATTAGCATGAAGTGTTTGATG 60.128 38.462 0.00 0.00 31.92 3.07
3336 3501 5.359009 AGGATTAGCATGAAGTGTTTGATGG 59.641 40.000 0.00 0.00 29.78 3.51
3337 3502 4.439305 TTAGCATGAAGTGTTTGATGGC 57.561 40.909 0.00 0.00 29.78 4.40
3338 3503 2.241160 AGCATGAAGTGTTTGATGGCA 58.759 42.857 0.00 0.00 29.78 4.92
3339 3504 2.029649 AGCATGAAGTGTTTGATGGCAC 60.030 45.455 0.00 0.00 29.78 5.01
3353 3518 0.752054 TGGCACAGGAAAAGCAAAGG 59.248 50.000 0.00 0.00 0.00 3.11
3354 3519 1.039856 GGCACAGGAAAAGCAAAGGA 58.960 50.000 0.00 0.00 0.00 3.36
3355 3520 1.412343 GGCACAGGAAAAGCAAAGGAA 59.588 47.619 0.00 0.00 0.00 3.36
3356 3521 2.037641 GGCACAGGAAAAGCAAAGGAAT 59.962 45.455 0.00 0.00 0.00 3.01
3357 3522 3.494924 GGCACAGGAAAAGCAAAGGAATT 60.495 43.478 0.00 0.00 0.00 2.17
3358 3523 3.495753 GCACAGGAAAAGCAAAGGAATTG 59.504 43.478 0.00 0.00 42.21 2.32
3359 3524 4.696455 CACAGGAAAAGCAAAGGAATTGT 58.304 39.130 0.00 0.00 41.32 2.71
3360 3525 5.738783 GCACAGGAAAAGCAAAGGAATTGTA 60.739 40.000 0.00 0.00 41.32 2.41
3361 3526 6.279882 CACAGGAAAAGCAAAGGAATTGTAA 58.720 36.000 0.00 0.00 41.32 2.41
3362 3527 6.760770 CACAGGAAAAGCAAAGGAATTGTAAA 59.239 34.615 0.00 0.00 41.32 2.01
3363 3528 7.279758 CACAGGAAAAGCAAAGGAATTGTAAAA 59.720 33.333 0.00 0.00 41.32 1.52
3364 3529 7.826744 ACAGGAAAAGCAAAGGAATTGTAAAAA 59.173 29.630 0.00 0.00 41.32 1.94
3365 3530 8.337532 CAGGAAAAGCAAAGGAATTGTAAAAAG 58.662 33.333 0.00 0.00 41.32 2.27
3366 3531 8.264347 AGGAAAAGCAAAGGAATTGTAAAAAGA 58.736 29.630 0.00 0.00 41.32 2.52
3367 3532 8.551205 GGAAAAGCAAAGGAATTGTAAAAAGAG 58.449 33.333 0.00 0.00 41.32 2.85
3368 3533 8.437360 AAAAGCAAAGGAATTGTAAAAAGAGG 57.563 30.769 0.00 0.00 41.32 3.69
3369 3534 6.731292 AGCAAAGGAATTGTAAAAAGAGGT 57.269 33.333 0.00 0.00 41.32 3.85
3370 3535 7.124573 AGCAAAGGAATTGTAAAAAGAGGTT 57.875 32.000 0.00 0.00 41.32 3.50
3371 3536 6.986231 AGCAAAGGAATTGTAAAAAGAGGTTG 59.014 34.615 0.00 0.00 41.32 3.77
3372 3537 6.202762 GCAAAGGAATTGTAAAAAGAGGTTGG 59.797 38.462 0.00 0.00 41.32 3.77
3373 3538 6.419484 AAGGAATTGTAAAAAGAGGTTGGG 57.581 37.500 0.00 0.00 0.00 4.12
3374 3539 4.838423 AGGAATTGTAAAAAGAGGTTGGGG 59.162 41.667 0.00 0.00 0.00 4.96
3375 3540 4.591498 GGAATTGTAAAAAGAGGTTGGGGT 59.409 41.667 0.00 0.00 0.00 4.95
3376 3541 5.510690 GGAATTGTAAAAAGAGGTTGGGGTG 60.511 44.000 0.00 0.00 0.00 4.61
3377 3542 2.952116 TGTAAAAAGAGGTTGGGGTGG 58.048 47.619 0.00 0.00 0.00 4.61
3378 3543 2.514582 TGTAAAAAGAGGTTGGGGTGGA 59.485 45.455 0.00 0.00 0.00 4.02
3379 3544 3.141272 TGTAAAAAGAGGTTGGGGTGGAT 59.859 43.478 0.00 0.00 0.00 3.41
3380 3545 2.309136 AAAAGAGGTTGGGGTGGATG 57.691 50.000 0.00 0.00 0.00 3.51
3381 3546 1.158007 AAAGAGGTTGGGGTGGATGT 58.842 50.000 0.00 0.00 0.00 3.06
3382 3547 1.158007 AAGAGGTTGGGGTGGATGTT 58.842 50.000 0.00 0.00 0.00 2.71
3383 3548 2.053747 AGAGGTTGGGGTGGATGTTA 57.946 50.000 0.00 0.00 0.00 2.41
3384 3549 1.916181 AGAGGTTGGGGTGGATGTTAG 59.084 52.381 0.00 0.00 0.00 2.34
3385 3550 1.913419 GAGGTTGGGGTGGATGTTAGA 59.087 52.381 0.00 0.00 0.00 2.10
3386 3551 2.509964 GAGGTTGGGGTGGATGTTAGAT 59.490 50.000 0.00 0.00 0.00 1.98
3387 3552 2.926329 AGGTTGGGGTGGATGTTAGATT 59.074 45.455 0.00 0.00 0.00 2.40
3388 3553 3.336694 AGGTTGGGGTGGATGTTAGATTT 59.663 43.478 0.00 0.00 0.00 2.17
3389 3554 3.699538 GGTTGGGGTGGATGTTAGATTTC 59.300 47.826 0.00 0.00 0.00 2.17
3390 3555 3.662759 TGGGGTGGATGTTAGATTTCC 57.337 47.619 0.00 0.00 0.00 3.13
3391 3556 3.197983 TGGGGTGGATGTTAGATTTCCT 58.802 45.455 0.00 0.00 0.00 3.36
3392 3557 4.376223 TGGGGTGGATGTTAGATTTCCTA 58.624 43.478 0.00 0.00 0.00 2.94
3393 3558 4.981647 TGGGGTGGATGTTAGATTTCCTAT 59.018 41.667 0.00 0.00 0.00 2.57
3394 3559 5.163099 TGGGGTGGATGTTAGATTTCCTATG 60.163 44.000 0.00 0.00 0.00 2.23
3395 3560 5.073144 GGGGTGGATGTTAGATTTCCTATGA 59.927 44.000 0.00 0.00 0.00 2.15
3396 3561 6.410388 GGGGTGGATGTTAGATTTCCTATGAA 60.410 42.308 0.00 0.00 0.00 2.57
3397 3562 7.060421 GGGTGGATGTTAGATTTCCTATGAAA 58.940 38.462 0.00 0.00 44.22 2.69
3453 3618 9.325248 TCCTATGTGATACAATCCTATGAATCA 57.675 33.333 0.00 0.00 0.00 2.57
3454 3619 9.948964 CCTATGTGATACAATCCTATGAATCAA 57.051 33.333 0.00 0.00 0.00 2.57
3457 3622 8.681486 TGTGATACAATCCTATGAATCAAAGG 57.319 34.615 0.00 0.00 0.00 3.11
3458 3623 8.493607 TGTGATACAATCCTATGAATCAAAGGA 58.506 33.333 0.00 0.00 43.38 3.36
3459 3624 8.778358 GTGATACAATCCTATGAATCAAAGGAC 58.222 37.037 0.00 0.00 42.08 3.85
3460 3625 7.939039 TGATACAATCCTATGAATCAAAGGACC 59.061 37.037 0.00 0.00 42.08 4.46
3461 3626 6.078456 ACAATCCTATGAATCAAAGGACCA 57.922 37.500 0.00 0.00 42.08 4.02
3462 3627 6.493166 ACAATCCTATGAATCAAAGGACCAA 58.507 36.000 0.00 0.00 42.08 3.67
3463 3628 6.378280 ACAATCCTATGAATCAAAGGACCAAC 59.622 38.462 0.00 0.00 42.08 3.77
3464 3629 5.512942 TCCTATGAATCAAAGGACCAACA 57.487 39.130 0.00 0.00 34.46 3.33
3465 3630 6.078456 TCCTATGAATCAAAGGACCAACAT 57.922 37.500 0.00 0.00 34.46 2.71
3466 3631 7.206789 TCCTATGAATCAAAGGACCAACATA 57.793 36.000 0.00 0.00 34.46 2.29
3467 3632 7.282585 TCCTATGAATCAAAGGACCAACATAG 58.717 38.462 0.00 0.00 34.46 2.23
3468 3633 6.488006 CCTATGAATCAAAGGACCAACATAGG 59.512 42.308 0.33 0.33 44.75 2.57
3469 3634 5.512942 TGAATCAAAGGACCAACATAGGA 57.487 39.130 0.00 0.00 0.00 2.94
3470 3635 5.886609 TGAATCAAAGGACCAACATAGGAA 58.113 37.500 0.00 0.00 0.00 3.36
3471 3636 6.310941 TGAATCAAAGGACCAACATAGGAAA 58.689 36.000 0.00 0.00 0.00 3.13
3472 3637 6.780031 TGAATCAAAGGACCAACATAGGAAAA 59.220 34.615 0.00 0.00 0.00 2.29
3473 3638 7.288852 TGAATCAAAGGACCAACATAGGAAAAA 59.711 33.333 0.00 0.00 0.00 1.94
3474 3639 7.797121 ATCAAAGGACCAACATAGGAAAAAT 57.203 32.000 0.00 0.00 0.00 1.82
3475 3640 7.610580 TCAAAGGACCAACATAGGAAAAATT 57.389 32.000 0.00 0.00 0.00 1.82
3476 3641 7.441017 TCAAAGGACCAACATAGGAAAAATTG 58.559 34.615 0.00 0.00 0.00 2.32
3477 3642 6.994421 AAGGACCAACATAGGAAAAATTGT 57.006 33.333 0.00 0.00 0.00 2.71
3478 3643 6.994421 AGGACCAACATAGGAAAAATTGTT 57.006 33.333 0.00 0.00 32.76 2.83
3479 3644 8.485578 AAGGACCAACATAGGAAAAATTGTTA 57.514 30.769 0.00 0.00 31.45 2.41
3480 3645 8.485578 AGGACCAACATAGGAAAAATTGTTAA 57.514 30.769 0.00 0.00 31.45 2.01
3481 3646 8.585018 AGGACCAACATAGGAAAAATTGTTAAG 58.415 33.333 0.00 0.00 31.45 1.85
3482 3647 7.817478 GGACCAACATAGGAAAAATTGTTAAGG 59.183 37.037 0.00 0.00 31.45 2.69
3483 3648 8.485578 ACCAACATAGGAAAAATTGTTAAGGA 57.514 30.769 0.00 0.00 31.45 3.36
3484 3649 9.100197 ACCAACATAGGAAAAATTGTTAAGGAT 57.900 29.630 0.00 0.00 31.45 3.24
3485 3650 9.942850 CCAACATAGGAAAAATTGTTAAGGATT 57.057 29.630 0.00 0.00 31.45 3.01
3508 3673 9.447157 GATTTCAATCCTCCAGAAATCCTATAG 57.553 37.037 13.38 0.00 45.88 1.31
3509 3674 8.567198 TTTCAATCCTCCAGAAATCCTATAGA 57.433 34.615 0.00 0.00 0.00 1.98
3510 3675 8.567198 TTCAATCCTCCAGAAATCCTATAGAA 57.433 34.615 0.00 0.00 0.00 2.10
3511 3676 8.748179 TCAATCCTCCAGAAATCCTATAGAAT 57.252 34.615 0.00 0.00 0.00 2.40
3512 3677 9.175577 TCAATCCTCCAGAAATCCTATAGAATT 57.824 33.333 0.00 0.00 0.00 2.17
3513 3678 9.447157 CAATCCTCCAGAAATCCTATAGAATTC 57.553 37.037 0.00 0.00 35.00 2.17
3514 3679 7.560796 TCCTCCAGAAATCCTATAGAATTCC 57.439 40.000 0.00 0.00 35.32 3.01
3515 3680 7.316841 TCCTCCAGAAATCCTATAGAATTCCT 58.683 38.462 0.00 0.00 35.32 3.36
3516 3681 7.796637 TCCTCCAGAAATCCTATAGAATTCCTT 59.203 37.037 0.00 0.00 35.32 3.36
3517 3682 8.443979 CCTCCAGAAATCCTATAGAATTCCTTT 58.556 37.037 0.00 0.00 35.32 3.11
3518 3683 9.282569 CTCCAGAAATCCTATAGAATTCCTTTG 57.717 37.037 0.00 0.00 35.32 2.77
3519 3684 9.003145 TCCAGAAATCCTATAGAATTCCTTTGA 57.997 33.333 0.00 0.00 35.32 2.69
3520 3685 9.632638 CCAGAAATCCTATAGAATTCCTTTGAA 57.367 33.333 0.00 0.00 35.32 2.69
3600 3766 6.481313 TCTCTCTATGTATGCACATTGAAAGC 59.519 38.462 0.00 0.00 42.98 3.51
3619 3785 9.814899 TTGAAAGCTTGAAACATTTTATCTTCA 57.185 25.926 0.00 0.00 0.00 3.02
3745 3920 4.243007 GCAAATGCTTACTCAAGTGGTT 57.757 40.909 0.00 0.00 38.21 3.67
3756 3931 4.536765 ACTCAAGTGGTTGATTCTTTGGT 58.463 39.130 0.00 0.00 41.96 3.67
3857 4044 8.653338 CATTCTTCTGCTAAAAATGTTTCATGG 58.347 33.333 0.00 0.00 0.00 3.66
4031 4317 1.876156 CAGCCTTCTGACTTGTTGTCC 59.124 52.381 0.00 0.00 44.75 4.02
4174 4463 1.879380 GTGCACCTGAAGTTGCACATA 59.121 47.619 23.20 0.00 45.22 2.29
4175 4464 2.293122 GTGCACCTGAAGTTGCACATAA 59.707 45.455 23.20 0.00 45.22 1.90
4176 4465 3.057315 GTGCACCTGAAGTTGCACATAAT 60.057 43.478 23.20 0.00 45.22 1.28
4254 4549 0.601558 CTCCTTTCACTCCGTCGGAA 59.398 55.000 16.23 0.00 0.00 4.30
4459 4754 3.888930 CCTTCTGGCTTTGGTAGTTTGAA 59.111 43.478 0.00 0.00 0.00 2.69
4541 4837 3.565482 TCAGGATGAAAAGCTGAACACAC 59.435 43.478 0.00 0.00 45.97 3.82
4566 4862 7.713073 ACAGCCTACTTTGATTAGCTAATTCTC 59.287 37.037 19.77 9.28 0.00 2.87
4605 4901 8.046294 TGTCAAGTAACACAACATTTGTACTT 57.954 30.769 0.00 1.54 43.23 2.24
4836 5137 4.533815 AGTGTCAATTGATCATCATGCCT 58.466 39.130 12.12 2.00 0.00 4.75
4891 5229 2.125310 TTCGCCGACGCCATCAAT 60.125 55.556 0.00 0.00 39.84 2.57
5069 5420 2.159707 GCGCGCTACTGAAGAATTTTGA 60.160 45.455 26.67 0.00 0.00 2.69
5076 5427 5.915196 GCTACTGAAGAATTTTGAAGCGTTT 59.085 36.000 0.00 0.00 0.00 3.60
5105 5456 9.126151 TGCTAATTATTTGGAATAATCGGTTCA 57.874 29.630 6.42 0.85 0.00 3.18
5130 5481 4.074970 CAGCCTTCACTGGATAAAGTTGT 58.925 43.478 0.00 0.00 33.85 3.32
5244 5603 1.106285 GCACCATTCATTGTCTCCCC 58.894 55.000 0.00 0.00 0.00 4.81
5254 5613 2.047179 GTCTCCCCGTGCCTGTTC 60.047 66.667 0.00 0.00 0.00 3.18
5274 5634 5.070313 TGTTCCATTTTTCCTTTTCCTGAGG 59.930 40.000 0.00 0.00 35.53 3.86
5365 5725 3.636679 CTCCTTCTATCCTGACCAGTGA 58.363 50.000 0.00 0.00 0.00 3.41
5385 5745 3.202818 TGAATGCAGTATGGGGATCTGTT 59.797 43.478 0.00 0.00 35.86 3.16
5393 5753 7.812940 GCAGTATGGGGATCTGTTCCATTTTT 61.813 42.308 12.84 1.88 41.29 1.94
5394 5754 9.714556 GCAGTATGGGGATCTGTTCCATTTTTG 62.715 44.444 12.84 10.66 41.29 2.44
5400 5760 5.989249 GGATCTGTTCCATTTTTGTTTTGC 58.011 37.500 0.00 0.00 44.74 3.68
5401 5761 5.526846 GGATCTGTTCCATTTTTGTTTTGCA 59.473 36.000 0.00 0.00 44.74 4.08
5451 5825 4.314740 TGGTGTTTATTGTTCAGCCAAC 57.685 40.909 0.00 0.00 35.28 3.77
5588 5962 4.280819 CCTCTCTGGGGCAATGATTAAAA 58.719 43.478 0.00 0.00 0.00 1.52
5608 5982 1.561542 AGGCGATTCCTTGGATGAACT 59.438 47.619 0.00 0.00 44.75 3.01
5667 6041 2.158971 GGCTGAAGATCTCCAACTCTCC 60.159 54.545 0.00 0.00 0.00 3.71
5673 6047 2.842496 AGATCTCCAACTCTCCATTGCA 59.158 45.455 0.00 0.00 0.00 4.08
5679 6053 1.135199 CAACTCTCCATTGCATGCACC 60.135 52.381 22.58 0.00 0.00 5.01
5700 6074 3.521560 CGATCAACTCCAAAGAATCGGA 58.478 45.455 0.00 0.00 33.49 4.55
5704 6078 3.323691 TCAACTCCAAAGAATCGGACTCA 59.676 43.478 0.00 0.00 0.00 3.41
5705 6079 4.065088 CAACTCCAAAGAATCGGACTCAA 58.935 43.478 0.00 0.00 0.00 3.02
5775 6149 1.601759 GAGCAAAGGCCTCACTGCA 60.602 57.895 27.15 0.00 42.56 4.41
5823 6198 3.368013 CCTCACCTATGCTGTTACGTGAA 60.368 47.826 0.00 0.00 30.44 3.18
5824 6199 4.242475 CTCACCTATGCTGTTACGTGAAA 58.758 43.478 0.00 0.00 30.44 2.69
5825 6200 3.991773 TCACCTATGCTGTTACGTGAAAC 59.008 43.478 0.00 0.00 0.00 2.78
5836 6211 3.047877 GTGAAACGCCCCCGACAG 61.048 66.667 0.00 0.00 38.29 3.51
5844 6219 3.072468 CCCCCGACAGCGAACCTA 61.072 66.667 0.00 0.00 40.82 3.08
5845 6220 2.494918 CCCCGACAGCGAACCTAG 59.505 66.667 0.00 0.00 40.82 3.02
5846 6221 2.348888 CCCCGACAGCGAACCTAGT 61.349 63.158 0.00 0.00 40.82 2.57
5847 6222 1.590147 CCCGACAGCGAACCTAGTT 59.410 57.895 0.00 0.00 40.82 2.24
5848 6223 0.813184 CCCGACAGCGAACCTAGTTA 59.187 55.000 0.00 0.00 40.82 2.24
5849 6224 1.203052 CCCGACAGCGAACCTAGTTAA 59.797 52.381 0.00 0.00 40.82 2.01
5850 6225 2.353011 CCCGACAGCGAACCTAGTTAAA 60.353 50.000 0.00 0.00 40.82 1.52
5851 6226 3.319755 CCGACAGCGAACCTAGTTAAAA 58.680 45.455 0.00 0.00 40.82 1.52
5852 6227 3.367025 CCGACAGCGAACCTAGTTAAAAG 59.633 47.826 0.00 0.00 40.82 2.27
5853 6228 3.985925 CGACAGCGAACCTAGTTAAAAGT 59.014 43.478 0.00 0.00 40.82 2.66
5854 6229 4.089636 CGACAGCGAACCTAGTTAAAAGTC 59.910 45.833 0.00 0.00 40.82 3.01
5855 6230 5.211174 ACAGCGAACCTAGTTAAAAGTCT 57.789 39.130 0.00 0.00 0.00 3.24
5856 6231 5.228665 ACAGCGAACCTAGTTAAAAGTCTC 58.771 41.667 0.00 0.00 0.00 3.36
5857 6232 4.323868 CAGCGAACCTAGTTAAAAGTCTCG 59.676 45.833 0.00 0.00 0.00 4.04
5858 6233 4.022503 AGCGAACCTAGTTAAAAGTCTCGT 60.023 41.667 0.00 0.00 0.00 4.18
5859 6234 4.323070 GCGAACCTAGTTAAAAGTCTCGTC 59.677 45.833 0.00 0.00 0.00 4.20
5860 6235 5.697826 CGAACCTAGTTAAAAGTCTCGTCT 58.302 41.667 0.00 0.00 0.00 4.18
5861 6236 5.568296 CGAACCTAGTTAAAAGTCTCGTCTG 59.432 44.000 0.00 0.00 0.00 3.51
5862 6237 4.807443 ACCTAGTTAAAAGTCTCGTCTGC 58.193 43.478 0.00 0.00 0.00 4.26
5863 6238 4.174762 CCTAGTTAAAAGTCTCGTCTGCC 58.825 47.826 0.00 0.00 0.00 4.85
5864 6239 3.746045 AGTTAAAAGTCTCGTCTGCCA 57.254 42.857 0.00 0.00 0.00 4.92
5865 6240 4.273148 AGTTAAAAGTCTCGTCTGCCAT 57.727 40.909 0.00 0.00 0.00 4.40
5866 6241 4.246458 AGTTAAAAGTCTCGTCTGCCATC 58.754 43.478 0.00 0.00 0.00 3.51
5867 6242 4.021016 AGTTAAAAGTCTCGTCTGCCATCT 60.021 41.667 0.00 0.00 0.00 2.90
5868 6243 2.663826 AAAGTCTCGTCTGCCATCTC 57.336 50.000 0.00 0.00 0.00 2.75
5869 6244 1.846007 AAGTCTCGTCTGCCATCTCT 58.154 50.000 0.00 0.00 0.00 3.10
5870 6245 1.846007 AGTCTCGTCTGCCATCTCTT 58.154 50.000 0.00 0.00 0.00 2.85
5871 6246 1.748493 AGTCTCGTCTGCCATCTCTTC 59.252 52.381 0.00 0.00 0.00 2.87
5872 6247 1.748493 GTCTCGTCTGCCATCTCTTCT 59.252 52.381 0.00 0.00 0.00 2.85
5873 6248 1.747924 TCTCGTCTGCCATCTCTTCTG 59.252 52.381 0.00 0.00 0.00 3.02
5874 6249 0.820226 TCGTCTGCCATCTCTTCTGG 59.180 55.000 0.00 0.00 36.81 3.86
5875 6250 0.534412 CGTCTGCCATCTCTTCTGGT 59.466 55.000 0.00 0.00 36.10 4.00
5876 6251 1.751351 CGTCTGCCATCTCTTCTGGTA 59.249 52.381 0.00 0.00 36.10 3.25
5877 6252 2.480416 CGTCTGCCATCTCTTCTGGTAC 60.480 54.545 0.00 0.00 36.10 3.34
5878 6253 2.763448 GTCTGCCATCTCTTCTGGTACT 59.237 50.000 0.00 0.00 36.10 2.73
5879 6254 3.196685 GTCTGCCATCTCTTCTGGTACTT 59.803 47.826 0.00 0.00 36.10 2.24
5880 6255 3.840666 TCTGCCATCTCTTCTGGTACTTT 59.159 43.478 0.00 0.00 36.10 2.66
5881 6256 4.081420 TCTGCCATCTCTTCTGGTACTTTC 60.081 45.833 0.00 0.00 36.10 2.62
5882 6257 3.190874 GCCATCTCTTCTGGTACTTTCG 58.809 50.000 0.00 0.00 36.10 3.46
5883 6258 3.786635 CCATCTCTTCTGGTACTTTCGG 58.213 50.000 0.00 0.00 0.00 4.30
5884 6259 3.195825 CCATCTCTTCTGGTACTTTCGGT 59.804 47.826 0.00 0.00 0.00 4.69
5885 6260 4.425520 CATCTCTTCTGGTACTTTCGGTC 58.574 47.826 0.00 0.00 0.00 4.79
5886 6261 3.493334 TCTCTTCTGGTACTTTCGGTCA 58.507 45.455 0.00 0.00 0.00 4.02
5887 6262 3.255149 TCTCTTCTGGTACTTTCGGTCAC 59.745 47.826 0.00 0.00 0.00 3.67
5888 6263 2.030540 TCTTCTGGTACTTTCGGTCACG 60.031 50.000 0.00 0.00 42.74 4.35
5889 6264 1.321474 TCTGGTACTTTCGGTCACGT 58.679 50.000 0.00 0.00 41.85 4.49
5890 6265 1.001048 TCTGGTACTTTCGGTCACGTG 60.001 52.381 9.94 9.94 41.85 4.49
5891 6266 0.598158 TGGTACTTTCGGTCACGTGC 60.598 55.000 11.67 6.03 41.85 5.34
5892 6267 0.598158 GGTACTTTCGGTCACGTGCA 60.598 55.000 11.67 0.00 41.85 4.57
5893 6268 0.505655 GTACTTTCGGTCACGTGCAC 59.494 55.000 11.67 6.82 41.85 4.57
5894 6269 0.598158 TACTTTCGGTCACGTGCACC 60.598 55.000 20.62 20.62 41.85 5.01
5900 6275 4.367023 GTCACGTGCACCGCCCTA 62.367 66.667 11.67 0.00 41.42 3.53
5901 6276 3.387091 TCACGTGCACCGCCCTAT 61.387 61.111 11.67 0.00 41.42 2.57
5902 6277 2.890474 CACGTGCACCGCCCTATC 60.890 66.667 12.15 0.00 41.42 2.08
5903 6278 3.387091 ACGTGCACCGCCCTATCA 61.387 61.111 12.15 0.00 41.42 2.15
5904 6279 2.125310 CGTGCACCGCCCTATCAA 60.125 61.111 12.15 0.00 0.00 2.57
5905 6280 2.173669 CGTGCACCGCCCTATCAAG 61.174 63.158 12.15 0.00 0.00 3.02
5906 6281 1.220749 GTGCACCGCCCTATCAAGA 59.779 57.895 5.22 0.00 0.00 3.02
5907 6282 1.090052 GTGCACCGCCCTATCAAGAC 61.090 60.000 5.22 0.00 0.00 3.01
5908 6283 1.264749 TGCACCGCCCTATCAAGACT 61.265 55.000 0.00 0.00 0.00 3.24
5909 6284 0.107654 GCACCGCCCTATCAAGACTT 60.108 55.000 0.00 0.00 0.00 3.01
5910 6285 1.679032 GCACCGCCCTATCAAGACTTT 60.679 52.381 0.00 0.00 0.00 2.66
5911 6286 2.711542 CACCGCCCTATCAAGACTTTT 58.288 47.619 0.00 0.00 0.00 2.27
5912 6287 3.081804 CACCGCCCTATCAAGACTTTTT 58.918 45.455 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 2.679996 ATTGGAGGCAAACCCGGC 60.680 61.111 0.00 0.00 39.21 6.13
40 41 0.958091 CGTTGTGGATTGGAGGCAAA 59.042 50.000 0.00 0.00 0.00 3.68
70 71 4.675029 ACGCGTTCTGGTTCCGGG 62.675 66.667 5.58 0.00 39.97 5.73
73 74 1.282930 GAGTCACGCGTTCTGGTTCC 61.283 60.000 10.22 0.00 0.00 3.62
124 125 1.303643 GCCCTTCCAGTGGACAAGG 60.304 63.158 19.57 19.57 31.34 3.61
127 128 2.525629 TCGCCCTTCCAGTGGACA 60.526 61.111 12.69 2.55 0.00 4.02
145 146 4.166011 GTTGCCGATGACGCAGCC 62.166 66.667 0.00 0.00 38.29 4.85
148 149 2.397754 CCATGTTGCCGATGACGCA 61.398 57.895 0.00 0.00 38.29 5.24
151 152 1.097547 CCTCCCATGTTGCCGATGAC 61.098 60.000 0.00 0.00 0.00 3.06
157 158 1.064463 TCAAGATCCTCCCATGTTGCC 60.064 52.381 0.00 0.00 29.16 4.52
160 161 2.915604 ACTGTCAAGATCCTCCCATGTT 59.084 45.455 0.00 0.00 0.00 2.71
307 309 1.953138 CGATCATGCCTCGTCAGCC 60.953 63.158 8.76 0.00 0.00 4.85
312 314 4.241555 GCCCCGATCATGCCTCGT 62.242 66.667 13.96 0.00 34.36 4.18
328 330 2.688958 ACGTAGTATCAGGACTCCTTGC 59.311 50.000 0.00 0.00 41.94 4.01
378 380 6.543100 ACTCTAGGAACTAACGTAGGATCAAG 59.457 42.308 0.00 0.00 42.17 3.02
380 382 5.999044 ACTCTAGGAACTAACGTAGGATCA 58.001 41.667 0.00 0.00 42.17 2.92
381 383 5.469760 GGACTCTAGGAACTAACGTAGGATC 59.530 48.000 0.00 0.00 42.17 3.36
382 384 5.104193 TGGACTCTAGGAACTAACGTAGGAT 60.104 44.000 0.00 0.00 42.17 3.24
383 385 4.225942 TGGACTCTAGGAACTAACGTAGGA 59.774 45.833 0.00 0.00 42.17 2.94
384 386 4.521146 TGGACTCTAGGAACTAACGTAGG 58.479 47.826 0.00 0.00 42.17 3.18
385 387 4.575645 CCTGGACTCTAGGAACTAACGTAG 59.424 50.000 2.11 0.00 42.17 3.51
387 389 3.009916 TCCTGGACTCTAGGAACTAACGT 59.990 47.826 8.68 0.00 42.17 3.99
388 390 3.618351 TCCTGGACTCTAGGAACTAACG 58.382 50.000 8.68 0.00 42.17 3.18
389 391 4.602107 ACTCCTGGACTCTAGGAACTAAC 58.398 47.826 12.00 0.00 43.42 2.34
391 393 5.038279 ACTACTCCTGGACTCTAGGAACTA 58.962 45.833 12.00 4.53 43.42 2.24
392 394 3.853784 ACTACTCCTGGACTCTAGGAACT 59.146 47.826 12.00 3.68 43.42 3.01
393 395 4.239428 ACTACTCCTGGACTCTAGGAAC 57.761 50.000 12.00 0.00 43.42 3.62
394 396 4.949966 AACTACTCCTGGACTCTAGGAA 57.050 45.455 12.00 0.00 43.42 3.36
395 397 5.038279 ACTAACTACTCCTGGACTCTAGGA 58.962 45.833 10.57 10.57 41.91 2.94
396 398 5.131475 AGACTAACTACTCCTGGACTCTAGG 59.869 48.000 1.87 1.87 36.63 3.02
397 399 6.243216 AGACTAACTACTCCTGGACTCTAG 57.757 45.833 0.00 0.00 0.00 2.43
398 400 5.130809 GGAGACTAACTACTCCTGGACTCTA 59.869 48.000 0.00 0.00 46.28 2.43
399 401 4.080186 GGAGACTAACTACTCCTGGACTCT 60.080 50.000 0.00 0.00 46.28 3.24
419 421 4.553330 TGGGCTTCTAACAAACTAGGAG 57.447 45.455 0.00 0.00 0.00 3.69
482 484 9.110382 AGAGGTAGGAGATAATGATTTATTGCT 57.890 33.333 0.00 0.00 0.00 3.91
508 510 5.073965 GGAGGAGAGATTAGGAGTAGAGGAA 59.926 48.000 0.00 0.00 0.00 3.36
528 530 1.001764 TGCTCAATGGTGCAGGAGG 60.002 57.895 0.00 0.00 38.50 4.30
778 789 5.392767 TTTCACTGTAGACTAGGAAGCTG 57.607 43.478 0.00 0.00 0.00 4.24
1187 1222 5.743872 CCGATAAAAGCTGTAGCAAAATTCC 59.256 40.000 6.65 0.00 45.16 3.01
1221 1256 4.440103 CCGATAACTATAGACGTGTTGTGC 59.560 45.833 6.78 0.00 0.00 4.57
1355 1407 2.922740 TTGACTGGTCAAGGTACCAC 57.077 50.000 15.94 3.19 44.68 4.16
1363 1415 3.070446 ACAACGGTATCTTGACTGGTCAA 59.930 43.478 14.30 14.30 46.27 3.18
1365 1417 3.251571 GACAACGGTATCTTGACTGGTC 58.748 50.000 0.00 0.00 0.00 4.02
1366 1418 2.631062 TGACAACGGTATCTTGACTGGT 59.369 45.455 0.00 0.00 0.00 4.00
1367 1419 2.993899 GTGACAACGGTATCTTGACTGG 59.006 50.000 0.00 0.00 0.00 4.00
1368 1420 2.993899 GGTGACAACGGTATCTTGACTG 59.006 50.000 0.00 0.00 0.00 3.51
1409 1461 5.881923 AAAATATGCCTTGGCATTGAGAT 57.118 34.783 28.91 15.41 0.00 2.75
1410 1462 5.680594 AAAAATATGCCTTGGCATTGAGA 57.319 34.783 28.91 13.86 0.00 3.27
1559 1618 1.357907 GTGACATCTGCAGCTCTGTC 58.642 55.000 24.92 24.92 38.74 3.51
1595 1654 4.731480 GTGTTTAGTTGGTTACTTTGCACG 59.269 41.667 0.00 0.00 38.33 5.34
1650 1709 5.449107 TTACTAGCGACTGTCAAAGAACT 57.551 39.130 8.73 0.00 0.00 3.01
1777 1840 1.349067 GGAACACCCACTGTAGAGGT 58.651 55.000 0.00 0.00 30.51 3.85
1910 1975 1.201343 GGTTCTATTCTCGCACGAGC 58.799 55.000 15.04 0.00 41.71 5.03
2182 2296 5.581085 AGGATTTAAGATTTTCCGTCTGTCG 59.419 40.000 0.00 0.00 39.52 4.35
2199 2313 5.719085 AGAACTTGAGCTCAGAGAGGATTTA 59.281 40.000 23.88 5.35 0.00 1.40
2263 2377 8.601546 AGAAAGACTTCAGAACTCCAATAGATT 58.398 33.333 0.00 0.00 33.64 2.40
2461 2576 1.926511 GCATTGGAGCCAGTGGAACG 61.927 60.000 15.20 0.00 45.86 3.95
2514 2629 7.744087 TTTGAGCACTAGACATGTAAAACAT 57.256 32.000 0.00 0.00 39.91 2.71
2531 2646 4.207165 ACTTGTTTAGCCTCTTTTGAGCA 58.793 39.130 0.00 0.00 44.93 4.26
2576 2691 5.942826 GCTAAGGAGAAAAGGCAGCATATAT 59.057 40.000 0.00 0.00 0.00 0.86
2586 2701 9.841880 GTAAAAATAACAGCTAAGGAGAAAAGG 57.158 33.333 0.00 0.00 0.00 3.11
2654 2789 9.912634 TTGCAAAATCCTTTCAGTAGAATAAAG 57.087 29.630 0.00 0.00 32.89 1.85
2655 2790 9.912634 CTTGCAAAATCCTTTCAGTAGAATAAA 57.087 29.630 0.00 0.00 32.89 1.40
2657 2792 8.635765 ACTTGCAAAATCCTTTCAGTAGAATA 57.364 30.769 0.00 0.00 32.89 1.75
2831 2969 6.368791 GCAGAAAAACCCCATCATTTTAAGAC 59.631 38.462 0.00 0.00 0.00 3.01
2847 2988 5.485662 ACTCAGTACAAGTGCAGAAAAAC 57.514 39.130 0.00 0.00 0.00 2.43
3065 3213 2.480073 CCACAAACCATCGGATCAATGC 60.480 50.000 0.00 0.00 0.00 3.56
3226 3391 4.975147 TCCTATGAATCAAAGAGGGCCTAA 59.025 41.667 5.73 0.00 0.00 2.69
3227 3392 4.566837 TCCTATGAATCAAAGAGGGCCTA 58.433 43.478 5.73 0.00 0.00 3.93
3228 3393 3.397527 TCCTATGAATCAAAGAGGGCCT 58.602 45.455 5.25 5.25 0.00 5.19
3229 3394 3.864789 TCCTATGAATCAAAGAGGGCC 57.135 47.619 0.00 0.00 0.00 5.80
3230 3395 6.322201 TGAAAATCCTATGAATCAAAGAGGGC 59.678 38.462 8.69 0.00 0.00 5.19
3231 3396 7.886629 TGAAAATCCTATGAATCAAAGAGGG 57.113 36.000 8.69 0.00 0.00 4.30
3246 3411 9.768215 TTCCTATTCCTACATTTTGAAAATCCT 57.232 29.630 0.00 0.00 0.00 3.24
3257 3422 9.461734 ACCCTATACTTTTCCTATTCCTACATT 57.538 33.333 0.00 0.00 0.00 2.71
3258 3423 9.461734 AACCCTATACTTTTCCTATTCCTACAT 57.538 33.333 0.00 0.00 0.00 2.29
3259 3424 8.711170 CAACCCTATACTTTTCCTATTCCTACA 58.289 37.037 0.00 0.00 0.00 2.74
3260 3425 8.155510 CCAACCCTATACTTTTCCTATTCCTAC 58.844 40.741 0.00 0.00 0.00 3.18
3261 3426 8.075621 TCCAACCCTATACTTTTCCTATTCCTA 58.924 37.037 0.00 0.00 0.00 2.94
3262 3427 6.912561 TCCAACCCTATACTTTTCCTATTCCT 59.087 38.462 0.00 0.00 0.00 3.36
3263 3428 7.145474 TCCAACCCTATACTTTTCCTATTCC 57.855 40.000 0.00 0.00 0.00 3.01
3264 3429 7.715686 CACTCCAACCCTATACTTTTCCTATTC 59.284 40.741 0.00 0.00 0.00 1.75
3265 3430 7.366551 CCACTCCAACCCTATACTTTTCCTATT 60.367 40.741 0.00 0.00 0.00 1.73
3266 3431 6.101296 CCACTCCAACCCTATACTTTTCCTAT 59.899 42.308 0.00 0.00 0.00 2.57
3267 3432 5.427481 CCACTCCAACCCTATACTTTTCCTA 59.573 44.000 0.00 0.00 0.00 2.94
3268 3433 4.227527 CCACTCCAACCCTATACTTTTCCT 59.772 45.833 0.00 0.00 0.00 3.36
3269 3434 4.524053 CCACTCCAACCCTATACTTTTCC 58.476 47.826 0.00 0.00 0.00 3.13
3270 3435 3.945921 GCCACTCCAACCCTATACTTTTC 59.054 47.826 0.00 0.00 0.00 2.29
3271 3436 3.332485 TGCCACTCCAACCCTATACTTTT 59.668 43.478 0.00 0.00 0.00 2.27
3272 3437 2.916934 TGCCACTCCAACCCTATACTTT 59.083 45.455 0.00 0.00 0.00 2.66
3273 3438 2.557869 TGCCACTCCAACCCTATACTT 58.442 47.619 0.00 0.00 0.00 2.24
3274 3439 2.263895 TGCCACTCCAACCCTATACT 57.736 50.000 0.00 0.00 0.00 2.12
3275 3440 2.851195 CATGCCACTCCAACCCTATAC 58.149 52.381 0.00 0.00 0.00 1.47
3276 3441 1.142870 GCATGCCACTCCAACCCTATA 59.857 52.381 6.36 0.00 0.00 1.31
3277 3442 0.106519 GCATGCCACTCCAACCCTAT 60.107 55.000 6.36 0.00 0.00 2.57
3278 3443 1.302949 GCATGCCACTCCAACCCTA 59.697 57.895 6.36 0.00 0.00 3.53
3279 3444 2.036256 GCATGCCACTCCAACCCT 59.964 61.111 6.36 0.00 0.00 4.34
3280 3445 2.283101 TGCATGCCACTCCAACCC 60.283 61.111 16.68 0.00 0.00 4.11
3281 3446 1.462731 TTGTGCATGCCACTCCAACC 61.463 55.000 16.68 0.00 44.92 3.77
3282 3447 0.388659 TTTGTGCATGCCACTCCAAC 59.611 50.000 16.68 5.10 44.92 3.77
3283 3448 1.001068 CATTTGTGCATGCCACTCCAA 59.999 47.619 16.68 7.42 44.92 3.53
3284 3449 0.604073 CATTTGTGCATGCCACTCCA 59.396 50.000 16.68 1.02 44.92 3.86
3285 3450 0.889994 TCATTTGTGCATGCCACTCC 59.110 50.000 16.68 0.00 44.92 3.85
3286 3451 2.728690 TTCATTTGTGCATGCCACTC 57.271 45.000 16.68 3.83 44.92 3.51
3287 3452 2.093869 GGATTCATTTGTGCATGCCACT 60.094 45.455 16.68 0.32 44.92 4.00
3288 3453 2.093869 AGGATTCATTTGTGCATGCCAC 60.094 45.455 16.68 13.73 44.90 5.01
3289 3454 2.181125 AGGATTCATTTGTGCATGCCA 58.819 42.857 16.68 10.08 0.00 4.92
3290 3455 2.973694 AGGATTCATTTGTGCATGCC 57.026 45.000 16.68 7.25 0.00 4.40
3291 3456 4.357142 CTGTAGGATTCATTTGTGCATGC 58.643 43.478 11.82 11.82 0.00 4.06
3292 3457 4.641541 TCCTGTAGGATTCATTTGTGCATG 59.358 41.667 0.00 0.00 39.78 4.06
3293 3458 4.858850 TCCTGTAGGATTCATTTGTGCAT 58.141 39.130 0.00 0.00 39.78 3.96
3294 3459 4.299586 TCCTGTAGGATTCATTTGTGCA 57.700 40.909 0.00 0.00 39.78 4.57
3307 3472 5.028549 ACACTTCATGCTAATCCTGTAGG 57.971 43.478 0.00 0.00 0.00 3.18
3308 3473 6.595326 TCAAACACTTCATGCTAATCCTGTAG 59.405 38.462 0.00 0.00 0.00 2.74
3309 3474 6.472016 TCAAACACTTCATGCTAATCCTGTA 58.528 36.000 0.00 0.00 0.00 2.74
3310 3475 5.316167 TCAAACACTTCATGCTAATCCTGT 58.684 37.500 0.00 0.00 0.00 4.00
3311 3476 5.885230 TCAAACACTTCATGCTAATCCTG 57.115 39.130 0.00 0.00 0.00 3.86
3312 3477 5.359009 CCATCAAACACTTCATGCTAATCCT 59.641 40.000 0.00 0.00 0.00 3.24
3313 3478 5.585390 CCATCAAACACTTCATGCTAATCC 58.415 41.667 0.00 0.00 0.00 3.01
3314 3479 5.039333 GCCATCAAACACTTCATGCTAATC 58.961 41.667 0.00 0.00 0.00 1.75
3315 3480 4.463539 TGCCATCAAACACTTCATGCTAAT 59.536 37.500 0.00 0.00 0.00 1.73
3316 3481 3.825585 TGCCATCAAACACTTCATGCTAA 59.174 39.130 0.00 0.00 0.00 3.09
3317 3482 3.191162 GTGCCATCAAACACTTCATGCTA 59.809 43.478 0.00 0.00 33.92 3.49
3318 3483 2.029649 GTGCCATCAAACACTTCATGCT 60.030 45.455 0.00 0.00 33.92 3.79
3319 3484 2.288334 TGTGCCATCAAACACTTCATGC 60.288 45.455 0.00 0.00 37.68 4.06
3320 3485 3.571571 CTGTGCCATCAAACACTTCATG 58.428 45.455 0.00 0.00 37.68 3.07
3321 3486 2.559668 CCTGTGCCATCAAACACTTCAT 59.440 45.455 0.00 0.00 37.68 2.57
3322 3487 1.955778 CCTGTGCCATCAAACACTTCA 59.044 47.619 0.00 0.00 37.68 3.02
3323 3488 2.229792 TCCTGTGCCATCAAACACTTC 58.770 47.619 0.00 0.00 37.68 3.01
3324 3489 2.363306 TCCTGTGCCATCAAACACTT 57.637 45.000 0.00 0.00 37.68 3.16
3325 3490 2.363306 TTCCTGTGCCATCAAACACT 57.637 45.000 0.00 0.00 37.68 3.55
3326 3491 3.383761 CTTTTCCTGTGCCATCAAACAC 58.616 45.455 0.00 0.00 37.31 3.32
3327 3492 2.224018 GCTTTTCCTGTGCCATCAAACA 60.224 45.455 0.00 0.00 0.00 2.83
3328 3493 2.224018 TGCTTTTCCTGTGCCATCAAAC 60.224 45.455 0.00 0.00 0.00 2.93
3329 3494 2.037901 TGCTTTTCCTGTGCCATCAAA 58.962 42.857 0.00 0.00 0.00 2.69
3330 3495 1.702182 TGCTTTTCCTGTGCCATCAA 58.298 45.000 0.00 0.00 0.00 2.57
3331 3496 1.702182 TTGCTTTTCCTGTGCCATCA 58.298 45.000 0.00 0.00 0.00 3.07
3332 3497 2.611224 CCTTTGCTTTTCCTGTGCCATC 60.611 50.000 0.00 0.00 0.00 3.51
3333 3498 1.345415 CCTTTGCTTTTCCTGTGCCAT 59.655 47.619 0.00 0.00 0.00 4.40
3334 3499 0.752054 CCTTTGCTTTTCCTGTGCCA 59.248 50.000 0.00 0.00 0.00 4.92
3335 3500 1.039856 TCCTTTGCTTTTCCTGTGCC 58.960 50.000 0.00 0.00 0.00 5.01
3336 3501 2.888834 TTCCTTTGCTTTTCCTGTGC 57.111 45.000 0.00 0.00 0.00 4.57
3337 3502 4.696455 ACAATTCCTTTGCTTTTCCTGTG 58.304 39.130 0.00 0.00 39.03 3.66
3338 3503 6.478512 TTACAATTCCTTTGCTTTTCCTGT 57.521 33.333 0.00 0.00 39.03 4.00
3339 3504 7.784633 TTTTACAATTCCTTTGCTTTTCCTG 57.215 32.000 0.00 0.00 39.03 3.86
3340 3505 8.264347 TCTTTTTACAATTCCTTTGCTTTTCCT 58.736 29.630 0.00 0.00 39.03 3.36
3341 3506 8.432110 TCTTTTTACAATTCCTTTGCTTTTCC 57.568 30.769 0.00 0.00 39.03 3.13
3342 3507 8.551205 CCTCTTTTTACAATTCCTTTGCTTTTC 58.449 33.333 0.00 0.00 39.03 2.29
3343 3508 8.046708 ACCTCTTTTTACAATTCCTTTGCTTTT 58.953 29.630 0.00 0.00 39.03 2.27
3344 3509 7.564793 ACCTCTTTTTACAATTCCTTTGCTTT 58.435 30.769 0.00 0.00 39.03 3.51
3345 3510 7.124573 ACCTCTTTTTACAATTCCTTTGCTT 57.875 32.000 0.00 0.00 39.03 3.91
3346 3511 6.731292 ACCTCTTTTTACAATTCCTTTGCT 57.269 33.333 0.00 0.00 39.03 3.91
3347 3512 6.202762 CCAACCTCTTTTTACAATTCCTTTGC 59.797 38.462 0.00 0.00 39.03 3.68
3348 3513 6.705825 CCCAACCTCTTTTTACAATTCCTTTG 59.294 38.462 0.00 0.00 41.36 2.77
3349 3514 6.183361 CCCCAACCTCTTTTTACAATTCCTTT 60.183 38.462 0.00 0.00 0.00 3.11
3350 3515 5.306937 CCCCAACCTCTTTTTACAATTCCTT 59.693 40.000 0.00 0.00 0.00 3.36
3351 3516 4.838423 CCCCAACCTCTTTTTACAATTCCT 59.162 41.667 0.00 0.00 0.00 3.36
3352 3517 4.591498 ACCCCAACCTCTTTTTACAATTCC 59.409 41.667 0.00 0.00 0.00 3.01
3353 3518 5.510690 CCACCCCAACCTCTTTTTACAATTC 60.511 44.000 0.00 0.00 0.00 2.17
3354 3519 4.346709 CCACCCCAACCTCTTTTTACAATT 59.653 41.667 0.00 0.00 0.00 2.32
3355 3520 3.901222 CCACCCCAACCTCTTTTTACAAT 59.099 43.478 0.00 0.00 0.00 2.71
3356 3521 3.052793 TCCACCCCAACCTCTTTTTACAA 60.053 43.478 0.00 0.00 0.00 2.41
3357 3522 2.514582 TCCACCCCAACCTCTTTTTACA 59.485 45.455 0.00 0.00 0.00 2.41
3358 3523 3.232720 TCCACCCCAACCTCTTTTTAC 57.767 47.619 0.00 0.00 0.00 2.01
3359 3524 3.141272 ACATCCACCCCAACCTCTTTTTA 59.859 43.478 0.00 0.00 0.00 1.52
3360 3525 2.090775 ACATCCACCCCAACCTCTTTTT 60.091 45.455 0.00 0.00 0.00 1.94
3361 3526 1.503347 ACATCCACCCCAACCTCTTTT 59.497 47.619 0.00 0.00 0.00 2.27
3362 3527 1.158007 ACATCCACCCCAACCTCTTT 58.842 50.000 0.00 0.00 0.00 2.52
3363 3528 1.158007 AACATCCACCCCAACCTCTT 58.842 50.000 0.00 0.00 0.00 2.85
3364 3529 1.916181 CTAACATCCACCCCAACCTCT 59.084 52.381 0.00 0.00 0.00 3.69
3365 3530 1.913419 TCTAACATCCACCCCAACCTC 59.087 52.381 0.00 0.00 0.00 3.85
3366 3531 2.053747 TCTAACATCCACCCCAACCT 57.946 50.000 0.00 0.00 0.00 3.50
3367 3532 3.382083 AATCTAACATCCACCCCAACC 57.618 47.619 0.00 0.00 0.00 3.77
3368 3533 3.699538 GGAAATCTAACATCCACCCCAAC 59.300 47.826 0.00 0.00 33.30 3.77
3369 3534 3.596046 AGGAAATCTAACATCCACCCCAA 59.404 43.478 0.00 0.00 35.62 4.12
3370 3535 3.197983 AGGAAATCTAACATCCACCCCA 58.802 45.455 0.00 0.00 35.62 4.96
3371 3536 3.953542 AGGAAATCTAACATCCACCCC 57.046 47.619 0.00 0.00 35.62 4.95
3372 3537 6.187727 TCATAGGAAATCTAACATCCACCC 57.812 41.667 0.00 0.00 35.62 4.61
3427 3592 9.325248 TGATTCATAGGATTGTATCACATAGGA 57.675 33.333 0.00 0.00 31.11 2.94
3428 3593 9.948964 TTGATTCATAGGATTGTATCACATAGG 57.051 33.333 0.00 0.00 34.43 2.57
3431 3596 9.293404 CCTTTGATTCATAGGATTGTATCACAT 57.707 33.333 15.80 0.00 35.14 3.21
3432 3597 8.493607 TCCTTTGATTCATAGGATTGTATCACA 58.506 33.333 18.57 0.00 36.84 3.58
3433 3598 8.778358 GTCCTTTGATTCATAGGATTGTATCAC 58.222 37.037 23.34 9.37 41.93 3.06
3434 3599 7.939039 GGTCCTTTGATTCATAGGATTGTATCA 59.061 37.037 23.34 2.05 41.93 2.15
3435 3600 7.939039 TGGTCCTTTGATTCATAGGATTGTATC 59.061 37.037 23.34 12.51 41.93 2.24
3436 3601 7.815383 TGGTCCTTTGATTCATAGGATTGTAT 58.185 34.615 23.34 0.00 41.93 2.29
3437 3602 7.206789 TGGTCCTTTGATTCATAGGATTGTA 57.793 36.000 23.34 11.20 41.93 2.41
3438 3603 6.078456 TGGTCCTTTGATTCATAGGATTGT 57.922 37.500 23.34 0.00 41.93 2.71
3439 3604 6.377996 TGTTGGTCCTTTGATTCATAGGATTG 59.622 38.462 23.34 1.66 41.93 2.67
3440 3605 6.493166 TGTTGGTCCTTTGATTCATAGGATT 58.507 36.000 23.34 0.00 41.93 3.01
3441 3606 6.078456 TGTTGGTCCTTTGATTCATAGGAT 57.922 37.500 23.34 0.00 41.93 3.24
3442 3607 5.512942 TGTTGGTCCTTTGATTCATAGGA 57.487 39.130 18.57 18.57 38.81 2.94
3443 3608 6.488006 CCTATGTTGGTCCTTTGATTCATAGG 59.512 42.308 14.95 14.95 43.47 2.57
3444 3609 7.282585 TCCTATGTTGGTCCTTTGATTCATAG 58.717 38.462 0.00 0.00 35.63 2.23
3445 3610 7.206789 TCCTATGTTGGTCCTTTGATTCATA 57.793 36.000 0.00 0.00 0.00 2.15
3446 3611 6.078456 TCCTATGTTGGTCCTTTGATTCAT 57.922 37.500 0.00 0.00 0.00 2.57
3447 3612 5.512942 TCCTATGTTGGTCCTTTGATTCA 57.487 39.130 0.00 0.00 0.00 2.57
3448 3613 6.834168 TTTCCTATGTTGGTCCTTTGATTC 57.166 37.500 0.00 0.00 0.00 2.52
3449 3614 7.610580 TTTTTCCTATGTTGGTCCTTTGATT 57.389 32.000 0.00 0.00 0.00 2.57
3450 3615 7.797121 ATTTTTCCTATGTTGGTCCTTTGAT 57.203 32.000 0.00 0.00 0.00 2.57
3451 3616 7.070571 ACAATTTTTCCTATGTTGGTCCTTTGA 59.929 33.333 0.00 0.00 0.00 2.69
3452 3617 7.216494 ACAATTTTTCCTATGTTGGTCCTTTG 58.784 34.615 0.00 0.00 0.00 2.77
3453 3618 7.373617 ACAATTTTTCCTATGTTGGTCCTTT 57.626 32.000 0.00 0.00 0.00 3.11
3454 3619 6.994421 ACAATTTTTCCTATGTTGGTCCTT 57.006 33.333 0.00 0.00 0.00 3.36
3455 3620 6.994421 AACAATTTTTCCTATGTTGGTCCT 57.006 33.333 0.00 0.00 34.88 3.85
3456 3621 7.817478 CCTTAACAATTTTTCCTATGTTGGTCC 59.183 37.037 0.00 0.00 36.71 4.46
3457 3622 8.581578 TCCTTAACAATTTTTCCTATGTTGGTC 58.418 33.333 0.00 0.00 36.71 4.02
3458 3623 8.485578 TCCTTAACAATTTTTCCTATGTTGGT 57.514 30.769 0.00 0.00 36.71 3.67
3459 3624 9.942850 AATCCTTAACAATTTTTCCTATGTTGG 57.057 29.630 0.00 0.00 36.71 3.77
3483 3648 9.175577 TCTATAGGATTTCTGGAGGATTGAAAT 57.824 33.333 0.00 0.00 41.37 2.17
3484 3649 8.567198 TCTATAGGATTTCTGGAGGATTGAAA 57.433 34.615 0.00 0.00 34.75 2.69
3485 3650 8.567198 TTCTATAGGATTTCTGGAGGATTGAA 57.433 34.615 0.00 0.00 0.00 2.69
3486 3651 8.748179 ATTCTATAGGATTTCTGGAGGATTGA 57.252 34.615 0.00 0.00 0.00 2.57
3487 3652 9.447157 GAATTCTATAGGATTTCTGGAGGATTG 57.553 37.037 7.72 0.00 33.80 2.67
3488 3653 8.610369 GGAATTCTATAGGATTTCTGGAGGATT 58.390 37.037 7.72 0.00 35.70 3.01
3489 3654 7.966593 AGGAATTCTATAGGATTTCTGGAGGAT 59.033 37.037 13.18 0.00 35.70 3.24
3490 3655 7.316841 AGGAATTCTATAGGATTTCTGGAGGA 58.683 38.462 13.18 0.00 35.70 3.71
3491 3656 7.566658 AGGAATTCTATAGGATTTCTGGAGG 57.433 40.000 13.18 0.00 35.70 4.30
3492 3657 9.282569 CAAAGGAATTCTATAGGATTTCTGGAG 57.717 37.037 14.48 5.15 35.70 3.86
3493 3658 9.003145 TCAAAGGAATTCTATAGGATTTCTGGA 57.997 33.333 14.48 12.28 35.70 3.86
3494 3659 9.632638 TTCAAAGGAATTCTATAGGATTTCTGG 57.367 33.333 14.48 10.44 35.70 3.86
3515 3680 6.015918 TGATTAAGGGCTCCTTTGATTCAAA 58.984 36.000 11.19 11.19 41.69 2.69
3516 3681 5.579047 TGATTAAGGGCTCCTTTGATTCAA 58.421 37.500 11.15 0.00 41.69 2.69
3517 3682 5.191727 TGATTAAGGGCTCCTTTGATTCA 57.808 39.130 11.15 7.42 41.69 2.57
3518 3683 5.595952 ACATGATTAAGGGCTCCTTTGATTC 59.404 40.000 11.15 5.47 41.69 2.52
3519 3684 5.522641 ACATGATTAAGGGCTCCTTTGATT 58.477 37.500 11.15 0.00 41.69 2.57
3520 3685 5.134725 ACATGATTAAGGGCTCCTTTGAT 57.865 39.130 11.15 6.91 41.69 2.57
3521 3686 4.591321 ACATGATTAAGGGCTCCTTTGA 57.409 40.909 11.15 2.95 41.69 2.69
3522 3687 4.952335 AGAACATGATTAAGGGCTCCTTTG 59.048 41.667 11.15 6.47 41.69 2.77
3523 3688 5.198602 AGAACATGATTAAGGGCTCCTTT 57.801 39.130 11.15 0.00 41.69 3.11
3524 3689 4.870021 AGAACATGATTAAGGGCTCCTT 57.130 40.909 0.00 10.76 46.63 3.36
3525 3690 4.228210 TCAAGAACATGATTAAGGGCTCCT 59.772 41.667 0.00 0.00 33.87 3.69
3526 3691 4.526970 TCAAGAACATGATTAAGGGCTCC 58.473 43.478 0.00 0.00 0.00 4.70
3527 3692 7.807977 TTATCAAGAACATGATTAAGGGCTC 57.192 36.000 0.00 0.00 40.44 4.70
3557 3722 4.326826 AGAGAAAATGATTTGCCAGACGA 58.673 39.130 0.00 0.00 0.00 4.20
3619 3785 4.655963 ACTATGTGGACAGAAGCAACATT 58.344 39.130 0.00 0.00 33.67 2.71
3745 3920 7.629157 TCCTGTGACATTATACCAAAGAATCA 58.371 34.615 0.00 0.00 0.00 2.57
3857 4044 9.356433 GATACTTTTCTAGTGACAAGTACCTTC 57.644 37.037 6.86 0.28 43.73 3.46
4031 4317 8.438513 CACGATTATGGATAAGACTATTTGCAG 58.561 37.037 0.00 0.00 0.00 4.41
4174 4463 2.240414 TCTCAGATGACATGGCACCATT 59.760 45.455 1.45 0.00 33.90 3.16
4175 4464 1.841919 TCTCAGATGACATGGCACCAT 59.158 47.619 1.45 0.00 37.08 3.55
4176 4465 1.278537 TCTCAGATGACATGGCACCA 58.721 50.000 1.45 0.00 0.00 4.17
4228 4523 1.611673 CGGAGTGAAAGGAGCATGGTT 60.612 52.381 0.00 0.00 0.00 3.67
4229 4524 0.036010 CGGAGTGAAAGGAGCATGGT 60.036 55.000 0.00 0.00 0.00 3.55
4230 4525 0.036010 ACGGAGTGAAAGGAGCATGG 60.036 55.000 0.00 0.00 42.51 3.66
4254 4549 0.484212 CCATGGCCATCCCTGGTATT 59.516 55.000 17.61 0.00 45.10 1.89
4541 4837 7.930865 AGAGAATTAGCTAATCAAAGTAGGCTG 59.069 37.037 19.11 0.00 0.00 4.85
4566 4862 2.812591 ACTTGACAGCAATCAGAAGCAG 59.187 45.455 1.52 0.00 32.68 4.24
4605 4901 9.638239 GCAAATAGGACACAAAATAAATCTGAA 57.362 29.630 0.00 0.00 0.00 3.02
4836 5137 9.391006 GAGATAATACCACAAACCATTAAGTCA 57.609 33.333 0.00 0.00 0.00 3.41
4891 5229 1.202891 TCTTCGTCTGACTGAGTCCCA 60.203 52.381 10.52 0.00 0.00 4.37
4900 5238 5.583061 TCTCTATGACTTCTCTTCGTCTGAC 59.417 44.000 0.00 0.00 0.00 3.51
5069 5420 6.862209 TCCAAATAATTAGCATCAAACGCTT 58.138 32.000 0.00 0.00 40.96 4.68
5076 5427 9.295825 ACCGATTATTCCAAATAATTAGCATCA 57.704 29.630 6.42 0.00 0.00 3.07
5105 5456 1.289160 TTATCCAGTGAAGGCTGCCT 58.711 50.000 17.22 17.22 35.28 4.75
5254 5613 3.903714 ACCCTCAGGAAAAGGAAAAATGG 59.096 43.478 0.00 0.00 35.83 3.16
5274 5634 2.919666 AATTTGATGCACTGCGTACC 57.080 45.000 0.00 0.00 0.00 3.34
5350 5710 3.118482 ACTGCATTCACTGGTCAGGATAG 60.118 47.826 2.87 0.00 0.00 2.08
5365 5725 3.435601 GGAACAGATCCCCATACTGCATT 60.436 47.826 0.00 0.00 43.00 3.56
5385 5745 7.401955 AAAAAGGATGCAAAACAAAAATGGA 57.598 28.000 0.00 0.00 0.00 3.41
5600 5974 2.115291 GCGAAGGCCCAGTTCATCC 61.115 63.158 0.00 0.00 0.00 3.51
5608 5982 1.454847 ACTGTTTTGCGAAGGCCCA 60.455 52.632 0.00 0.00 38.85 5.36
5673 6047 2.086869 CTTTGGAGTTGATCGGTGCAT 58.913 47.619 0.00 0.00 0.00 3.96
5679 6053 3.307242 GTCCGATTCTTTGGAGTTGATCG 59.693 47.826 0.00 0.00 35.99 3.69
5700 6074 5.288804 GGTGCACAAATGTTAACATTGAGT 58.711 37.500 29.54 26.14 45.06 3.41
5705 6079 2.968574 TGGGGTGCACAAATGTTAACAT 59.031 40.909 20.43 15.47 38.41 2.71
5801 6176 2.165641 TCACGTAACAGCATAGGTGAGG 59.834 50.000 12.66 0.00 42.51 3.86
5827 6202 3.072468 TAGGTTCGCTGTCGGGGG 61.072 66.667 0.00 0.00 36.13 5.40
5828 6203 1.885163 AACTAGGTTCGCTGTCGGGG 61.885 60.000 0.00 0.00 36.13 5.73
5829 6204 0.813184 TAACTAGGTTCGCTGTCGGG 59.187 55.000 0.00 0.00 36.13 5.14
5830 6205 2.642139 TTAACTAGGTTCGCTGTCGG 57.358 50.000 0.00 0.00 36.13 4.79
5831 6206 3.985925 ACTTTTAACTAGGTTCGCTGTCG 59.014 43.478 0.00 0.00 0.00 4.35
5832 6207 5.228665 AGACTTTTAACTAGGTTCGCTGTC 58.771 41.667 0.00 0.00 0.00 3.51
5833 6208 5.211174 AGACTTTTAACTAGGTTCGCTGT 57.789 39.130 0.00 0.00 0.00 4.40
5834 6209 4.323868 CGAGACTTTTAACTAGGTTCGCTG 59.676 45.833 0.00 0.00 0.00 5.18
5835 6210 4.022503 ACGAGACTTTTAACTAGGTTCGCT 60.023 41.667 0.00 0.00 0.00 4.93
5836 6211 4.233005 ACGAGACTTTTAACTAGGTTCGC 58.767 43.478 0.00 0.00 0.00 4.70
5837 6212 5.568296 CAGACGAGACTTTTAACTAGGTTCG 59.432 44.000 0.00 0.00 0.00 3.95
5838 6213 5.345472 GCAGACGAGACTTTTAACTAGGTTC 59.655 44.000 0.00 0.00 0.00 3.62
5839 6214 5.228665 GCAGACGAGACTTTTAACTAGGTT 58.771 41.667 0.00 0.00 0.00 3.50
5840 6215 4.321824 GGCAGACGAGACTTTTAACTAGGT 60.322 45.833 0.00 0.00 0.00 3.08
5841 6216 4.174762 GGCAGACGAGACTTTTAACTAGG 58.825 47.826 0.00 0.00 0.00 3.02
5842 6217 4.806330 TGGCAGACGAGACTTTTAACTAG 58.194 43.478 0.00 0.00 0.00 2.57
5843 6218 4.859304 TGGCAGACGAGACTTTTAACTA 57.141 40.909 0.00 0.00 0.00 2.24
5844 6219 3.746045 TGGCAGACGAGACTTTTAACT 57.254 42.857 0.00 0.00 0.00 2.24
5845 6220 4.246458 AGATGGCAGACGAGACTTTTAAC 58.754 43.478 0.00 0.00 0.00 2.01
5846 6221 4.220821 AGAGATGGCAGACGAGACTTTTAA 59.779 41.667 0.00 0.00 0.00 1.52
5847 6222 3.764434 AGAGATGGCAGACGAGACTTTTA 59.236 43.478 0.00 0.00 0.00 1.52
5848 6223 2.564947 AGAGATGGCAGACGAGACTTTT 59.435 45.455 0.00 0.00 0.00 2.27
5849 6224 2.175202 AGAGATGGCAGACGAGACTTT 58.825 47.619 0.00 0.00 0.00 2.66
5850 6225 1.846007 AGAGATGGCAGACGAGACTT 58.154 50.000 0.00 0.00 0.00 3.01
5851 6226 1.748493 GAAGAGATGGCAGACGAGACT 59.252 52.381 0.00 0.00 0.00 3.24
5852 6227 1.748493 AGAAGAGATGGCAGACGAGAC 59.252 52.381 0.00 0.00 0.00 3.36
5853 6228 1.747924 CAGAAGAGATGGCAGACGAGA 59.252 52.381 0.00 0.00 0.00 4.04
5854 6229 1.202394 CCAGAAGAGATGGCAGACGAG 60.202 57.143 0.00 0.00 0.00 4.18
5855 6230 0.820226 CCAGAAGAGATGGCAGACGA 59.180 55.000 0.00 0.00 0.00 4.20
5856 6231 0.534412 ACCAGAAGAGATGGCAGACG 59.466 55.000 0.00 0.00 41.87 4.18
5857 6232 2.763448 AGTACCAGAAGAGATGGCAGAC 59.237 50.000 0.00 0.00 41.87 3.51
5858 6233 3.107402 AGTACCAGAAGAGATGGCAGA 57.893 47.619 0.00 0.00 41.87 4.26
5859 6234 3.902881 AAGTACCAGAAGAGATGGCAG 57.097 47.619 0.00 0.00 41.87 4.85
5860 6235 3.368427 CGAAAGTACCAGAAGAGATGGCA 60.368 47.826 0.00 0.00 41.87 4.92
5861 6236 3.190874 CGAAAGTACCAGAAGAGATGGC 58.809 50.000 0.00 0.00 41.87 4.40
5862 6237 3.195825 ACCGAAAGTACCAGAAGAGATGG 59.804 47.826 0.00 0.00 43.87 3.51
5863 6238 4.082190 TGACCGAAAGTACCAGAAGAGATG 60.082 45.833 0.00 0.00 0.00 2.90
5864 6239 4.082136 GTGACCGAAAGTACCAGAAGAGAT 60.082 45.833 0.00 0.00 0.00 2.75
5865 6240 3.255149 GTGACCGAAAGTACCAGAAGAGA 59.745 47.826 0.00 0.00 0.00 3.10
5866 6241 3.576648 GTGACCGAAAGTACCAGAAGAG 58.423 50.000 0.00 0.00 0.00 2.85
5867 6242 2.030540 CGTGACCGAAAGTACCAGAAGA 60.031 50.000 0.00 0.00 35.63 2.87
5868 6243 2.288030 ACGTGACCGAAAGTACCAGAAG 60.288 50.000 0.00 0.00 37.88 2.85
5869 6244 1.682854 ACGTGACCGAAAGTACCAGAA 59.317 47.619 0.00 0.00 37.88 3.02
5870 6245 1.001048 CACGTGACCGAAAGTACCAGA 60.001 52.381 10.90 0.00 37.88 3.86
5871 6246 1.415374 CACGTGACCGAAAGTACCAG 58.585 55.000 10.90 0.00 37.88 4.00
5872 6247 0.598158 GCACGTGACCGAAAGTACCA 60.598 55.000 22.23 0.00 37.88 3.25
5873 6248 0.598158 TGCACGTGACCGAAAGTACC 60.598 55.000 22.23 0.00 37.88 3.34
5874 6249 0.505655 GTGCACGTGACCGAAAGTAC 59.494 55.000 22.23 0.00 37.88 2.73
5875 6250 0.598158 GGTGCACGTGACCGAAAGTA 60.598 55.000 22.23 0.00 37.88 2.24
5876 6251 1.885850 GGTGCACGTGACCGAAAGT 60.886 57.895 22.23 0.00 37.88 2.66
5877 6252 2.935955 GGTGCACGTGACCGAAAG 59.064 61.111 22.23 0.00 37.88 2.62
5883 6258 3.659089 ATAGGGCGGTGCACGTGAC 62.659 63.158 22.23 14.21 46.52 3.67
5884 6259 3.365291 GATAGGGCGGTGCACGTGA 62.365 63.158 22.23 1.04 46.52 4.35
5885 6260 2.890474 GATAGGGCGGTGCACGTG 60.890 66.667 12.28 12.28 46.52 4.49
5886 6261 2.852495 CTTGATAGGGCGGTGCACGT 62.852 60.000 11.45 0.00 46.52 4.49
5888 6263 1.090052 GTCTTGATAGGGCGGTGCAC 61.090 60.000 8.80 8.80 0.00 4.57
5889 6264 1.220749 GTCTTGATAGGGCGGTGCA 59.779 57.895 0.00 0.00 0.00 4.57
5890 6265 0.107654 AAGTCTTGATAGGGCGGTGC 60.108 55.000 0.00 0.00 0.00 5.01
5891 6266 2.403252 AAAGTCTTGATAGGGCGGTG 57.597 50.000 0.00 0.00 0.00 4.94
5892 6267 3.434940 AAAAAGTCTTGATAGGGCGGT 57.565 42.857 0.00 0.00 0.00 5.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.