Multiple sequence alignment - TraesCS3B01G119000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G119000 chr3B 100.000 2827 0 0 1 2827 88984904 88987730 0.000000e+00 5221.0
1 TraesCS3B01G119000 chr3B 77.023 766 127 34 1264 2003 85356417 85355675 7.340000e-106 394.0
2 TraesCS3B01G119000 chr3B 82.787 122 21 0 965 1086 86130412 86130291 2.980000e-20 110.0
3 TraesCS3B01G119000 chr3A 89.140 884 69 9 1655 2516 65893104 65893982 0.000000e+00 1075.0
4 TraesCS3B01G119000 chr3A 87.740 416 29 10 1264 1662 65884442 65884852 1.530000e-127 466.0
5 TraesCS3B01G119000 chr3A 87.307 323 32 5 777 1092 65883715 65884035 7.440000e-96 361.0
6 TraesCS3B01G119000 chr3A 91.403 221 15 4 386 603 65883168 65883387 1.650000e-77 300.0
7 TraesCS3B01G119000 chr3A 87.302 252 26 4 119 369 65882575 65882821 1.660000e-72 283.0
8 TraesCS3B01G119000 chr3D 89.005 764 61 8 1757 2500 56584312 56585072 0.000000e+00 924.0
9 TraesCS3B01G119000 chr3D 90.329 517 26 5 1264 1760 56570369 56570881 0.000000e+00 656.0
10 TraesCS3B01G119000 chr3D 84.959 492 45 9 777 1241 56569894 56570383 3.300000e-129 472.0
11 TraesCS3B01G119000 chr3D 87.440 414 33 9 204 603 56569161 56569569 2.570000e-125 459.0
12 TraesCS3B01G119000 chr3D 91.667 156 12 1 112 266 56569016 56569171 6.130000e-52 215.0
13 TraesCS3B01G119000 chr3D 77.273 286 41 13 967 1237 55532488 55532764 2.270000e-31 147.0
14 TraesCS3B01G119000 chr3D 86.508 126 17 0 965 1090 55918493 55918618 3.800000e-29 139.0
15 TraesCS3B01G119000 chr3D 81.818 110 13 2 1129 1238 55768837 55768939 5.020000e-13 86.1
16 TraesCS3B01G119000 chr3D 81.818 110 13 2 1129 1238 55776944 55777046 5.020000e-13 86.1
17 TraesCS3B01G119000 chr5A 82.468 308 35 11 1639 1944 638603437 638603147 4.680000e-63 252.0
18 TraesCS3B01G119000 chr5A 91.720 157 10 3 2674 2827 185644814 185644658 6.130000e-52 215.0
19 TraesCS3B01G119000 chr5A 76.955 243 37 13 1265 1505 638603838 638603613 1.380000e-23 121.0
20 TraesCS3B01G119000 chr5D 92.357 157 8 3 2674 2827 138016611 138016766 1.320000e-53 220.0
21 TraesCS3B01G119000 chr5D 91.667 156 11 2 2674 2827 434715949 434716104 6.130000e-52 215.0
22 TraesCS3B01G119000 chrUn 91.026 156 12 2 2674 2827 21943870 21943715 2.850000e-50 209.0
23 TraesCS3B01G119000 chr1B 91.391 151 11 2 2674 2822 2139415 2139565 3.690000e-49 206.0
24 TraesCS3B01G119000 chr1B 89.103 156 15 2 2674 2827 499484590 499484745 2.870000e-45 193.0
25 TraesCS3B01G119000 chr7D 90.385 156 12 2 2674 2827 511062043 511062197 4.780000e-48 202.0
26 TraesCS3B01G119000 chr7D 93.985 133 6 2 2697 2827 167632197 167632329 1.720000e-47 200.0
27 TraesCS3B01G119000 chr6B 90.541 148 12 2 2674 2819 150448135 150447988 7.990000e-46 195.0
28 TraesCS3B01G119000 chr2D 85.950 121 15 2 2526 2644 346570996 346570876 8.220000e-26 128.0
29 TraesCS3B01G119000 chr5B 76.639 244 38 13 1265 1506 641133749 641133523 1.780000e-22 117.0
30 TraesCS3B01G119000 chr2B 82.258 124 18 3 2525 2644 412392473 412392350 1.390000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G119000 chr3B 88984904 88987730 2826 False 5221.0 5221 100.00000 1 2827 1 chr3B.!!$F1 2826
1 TraesCS3B01G119000 chr3B 85355675 85356417 742 True 394.0 394 77.02300 1264 2003 1 chr3B.!!$R1 739
2 TraesCS3B01G119000 chr3A 65893104 65893982 878 False 1075.0 1075 89.14000 1655 2516 1 chr3A.!!$F1 861
3 TraesCS3B01G119000 chr3A 65882575 65884852 2277 False 352.5 466 88.43800 119 1662 4 chr3A.!!$F2 1543
4 TraesCS3B01G119000 chr3D 56584312 56585072 760 False 924.0 924 89.00500 1757 2500 1 chr3D.!!$F5 743
5 TraesCS3B01G119000 chr3D 56569016 56570881 1865 False 450.5 656 88.59875 112 1760 4 chr3D.!!$F6 1648

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
109 110 0.035317 TCATCTTTCACGGCTGCACT 59.965 50.0 0.50 0.0 0.00 4.40 F
1227 2086 0.249953 TCGTAAAACGGCTCCAGCAA 60.250 50.0 0.03 0.0 42.81 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1229 2088 0.181587 TTTTGCGGTTGACTCCTCCA 59.818 50.0 0.0 0.0 0.00 3.86 R
2531 3466 0.752054 CCTGCATCTCCTCAGAGTCC 59.248 60.0 0.0 0.0 41.26 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.560966 GTGGAATAATGGAACGATTGTGT 57.439 39.130 0.00 0.00 0.00 3.72
23 24 5.569413 GTGGAATAATGGAACGATTGTGTC 58.431 41.667 0.00 0.00 0.00 3.67
24 25 4.638421 TGGAATAATGGAACGATTGTGTCC 59.362 41.667 0.00 7.15 0.00 4.02
25 26 4.260620 GGAATAATGGAACGATTGTGTCCG 60.261 45.833 0.00 0.00 0.00 4.79
26 27 2.178912 AATGGAACGATTGTGTCCGT 57.821 45.000 0.00 6.54 41.14 4.69
27 28 1.722011 ATGGAACGATTGTGTCCGTC 58.278 50.000 0.00 0.00 38.13 4.79
28 29 0.320073 TGGAACGATTGTGTCCGTCC 60.320 55.000 0.00 2.87 38.13 4.79
29 30 1.349259 GGAACGATTGTGTCCGTCCG 61.349 60.000 0.00 0.00 38.13 4.79
30 31 0.665369 GAACGATTGTGTCCGTCCGT 60.665 55.000 0.00 0.00 38.13 4.69
31 32 0.597568 AACGATTGTGTCCGTCCGTA 59.402 50.000 0.00 0.00 38.13 4.02
32 33 0.109597 ACGATTGTGTCCGTCCGTAC 60.110 55.000 0.00 0.00 33.23 3.67
41 42 3.613702 CGTCCGTACGCGCAATCC 61.614 66.667 10.49 0.00 43.12 3.01
42 43 2.507547 GTCCGTACGCGCAATCCA 60.508 61.111 10.49 0.00 36.67 3.41
43 44 2.095847 GTCCGTACGCGCAATCCAA 61.096 57.895 10.49 0.00 36.67 3.53
44 45 2.095847 TCCGTACGCGCAATCCAAC 61.096 57.895 10.49 0.00 36.67 3.77
45 46 2.019476 CGTACGCGCAATCCAACG 59.981 61.111 5.73 3.43 0.00 4.10
46 47 2.398036 GTACGCGCAATCCAACGG 59.602 61.111 5.73 0.00 0.00 4.44
47 48 2.048033 TACGCGCAATCCAACGGT 60.048 55.556 5.73 0.00 0.00 4.83
48 49 1.668472 TACGCGCAATCCAACGGTT 60.668 52.632 5.73 0.00 0.00 4.44
49 50 1.902716 TACGCGCAATCCAACGGTTG 61.903 55.000 13.86 13.86 0.00 3.77
58 59 4.889807 CAACGGTTGGGGAGTTCA 57.110 55.556 13.03 0.00 0.00 3.18
59 60 3.103637 CAACGGTTGGGGAGTTCAA 57.896 52.632 13.03 0.00 0.00 2.69
60 61 1.394618 CAACGGTTGGGGAGTTCAAA 58.605 50.000 13.03 0.00 0.00 2.69
61 62 1.960689 CAACGGTTGGGGAGTTCAAAT 59.039 47.619 13.03 0.00 0.00 2.32
62 63 1.905637 ACGGTTGGGGAGTTCAAATC 58.094 50.000 0.00 0.00 0.00 2.17
63 64 1.144093 ACGGTTGGGGAGTTCAAATCA 59.856 47.619 0.00 0.00 0.00 2.57
64 65 1.539827 CGGTTGGGGAGTTCAAATCAC 59.460 52.381 0.00 0.00 0.00 3.06
65 66 2.593026 GGTTGGGGAGTTCAAATCACA 58.407 47.619 0.00 0.00 0.00 3.58
66 67 3.165071 GGTTGGGGAGTTCAAATCACAT 58.835 45.455 0.00 0.00 0.00 3.21
67 68 3.578282 GGTTGGGGAGTTCAAATCACATT 59.422 43.478 0.00 0.00 0.00 2.71
68 69 4.559153 GTTGGGGAGTTCAAATCACATTG 58.441 43.478 0.00 0.00 0.00 2.82
69 70 3.164268 TGGGGAGTTCAAATCACATTGG 58.836 45.455 0.00 0.00 0.00 3.16
70 71 2.094026 GGGGAGTTCAAATCACATTGGC 60.094 50.000 0.00 0.00 0.00 4.52
71 72 2.827921 GGGAGTTCAAATCACATTGGCT 59.172 45.455 0.00 0.00 0.00 4.75
72 73 3.367703 GGGAGTTCAAATCACATTGGCTG 60.368 47.826 0.00 0.00 0.00 4.85
73 74 3.367703 GGAGTTCAAATCACATTGGCTGG 60.368 47.826 0.00 0.00 0.00 4.85
74 75 3.499338 AGTTCAAATCACATTGGCTGGA 58.501 40.909 0.00 0.00 0.00 3.86
75 76 3.896888 AGTTCAAATCACATTGGCTGGAA 59.103 39.130 0.00 0.00 0.00 3.53
76 77 4.021719 AGTTCAAATCACATTGGCTGGAAG 60.022 41.667 0.00 0.00 0.00 3.46
98 99 3.375911 GCTAGTGCGTTGTCATCTTTC 57.624 47.619 0.00 0.00 0.00 2.62
99 100 2.736721 GCTAGTGCGTTGTCATCTTTCA 59.263 45.455 0.00 0.00 0.00 2.69
100 101 3.423645 GCTAGTGCGTTGTCATCTTTCAC 60.424 47.826 0.00 0.00 0.00 3.18
101 102 1.526887 AGTGCGTTGTCATCTTTCACG 59.473 47.619 0.00 0.00 0.00 4.35
102 103 0.865111 TGCGTTGTCATCTTTCACGG 59.135 50.000 0.00 0.00 0.00 4.94
103 104 0.452784 GCGTTGTCATCTTTCACGGC 60.453 55.000 0.00 0.00 0.00 5.68
104 105 1.148310 CGTTGTCATCTTTCACGGCT 58.852 50.000 0.00 0.00 0.00 5.52
105 106 1.136252 CGTTGTCATCTTTCACGGCTG 60.136 52.381 0.00 0.00 0.00 4.85
106 107 0.874390 TTGTCATCTTTCACGGCTGC 59.126 50.000 0.00 0.00 0.00 5.25
107 108 0.250252 TGTCATCTTTCACGGCTGCA 60.250 50.000 0.50 0.00 0.00 4.41
108 109 0.166814 GTCATCTTTCACGGCTGCAC 59.833 55.000 0.50 0.00 0.00 4.57
109 110 0.035317 TCATCTTTCACGGCTGCACT 59.965 50.000 0.50 0.00 0.00 4.40
110 111 0.877071 CATCTTTCACGGCTGCACTT 59.123 50.000 0.50 0.00 0.00 3.16
111 112 1.135859 CATCTTTCACGGCTGCACTTC 60.136 52.381 0.50 0.00 0.00 3.01
112 113 0.884704 TCTTTCACGGCTGCACTTCC 60.885 55.000 0.50 0.00 0.00 3.46
117 118 3.165498 CGGCTGCACTTCCGTTAC 58.835 61.111 0.50 0.00 40.72 2.50
121 122 0.605589 GCTGCACTTCCGTTACCCTT 60.606 55.000 0.00 0.00 0.00 3.95
124 125 1.950909 TGCACTTCCGTTACCCTTTTG 59.049 47.619 0.00 0.00 0.00 2.44
150 151 2.892425 CAGGGCAGGTCGAATCGC 60.892 66.667 0.00 0.00 0.00 4.58
187 188 1.198637 GAAACCTCTGCATGCAGTGTC 59.801 52.381 39.08 27.46 43.96 3.67
223 224 2.977829 CGATCCGTGTCATGGTAATACG 59.022 50.000 10.97 7.19 34.78 3.06
251 252 0.798776 GCAGGGCGTGATATATGCAC 59.201 55.000 12.03 0.00 45.39 4.57
268 321 0.721154 CACATTGATCCGTGTCACCG 59.279 55.000 0.00 0.00 0.00 4.94
270 323 1.018752 CATTGATCCGTGTCACCGCA 61.019 55.000 0.00 0.00 0.00 5.69
302 355 5.276270 CCGTCCAATTAATTCAATCAGCAG 58.724 41.667 0.00 0.00 0.00 4.24
318 371 1.442526 GCAGCGCCAGTGCTAATCAT 61.443 55.000 12.41 0.00 45.23 2.45
323 376 2.478134 GCGCCAGTGCTAATCATTCTAG 59.522 50.000 0.00 0.00 34.43 2.43
324 377 3.800261 GCGCCAGTGCTAATCATTCTAGA 60.800 47.826 0.00 0.00 34.43 2.43
325 378 3.986572 CGCCAGTGCTAATCATTCTAGAG 59.013 47.826 0.00 0.00 34.43 2.43
326 379 4.500545 CGCCAGTGCTAATCATTCTAGAGT 60.501 45.833 0.00 0.00 34.43 3.24
327 380 5.278512 CGCCAGTGCTAATCATTCTAGAGTA 60.279 44.000 0.00 0.00 34.43 2.59
329 382 6.461648 GCCAGTGCTAATCATTCTAGAGTACA 60.462 42.308 0.00 0.00 33.53 2.90
330 383 6.920758 CCAGTGCTAATCATTCTAGAGTACAC 59.079 42.308 0.00 0.00 0.00 2.90
348 401 3.153919 ACACCACAAATTACGGCATCTT 58.846 40.909 0.00 0.00 0.00 2.40
349 402 3.190535 ACACCACAAATTACGGCATCTTC 59.809 43.478 0.00 0.00 0.00 2.87
350 403 3.440173 CACCACAAATTACGGCATCTTCT 59.560 43.478 0.00 0.00 0.00 2.85
351 404 4.634004 CACCACAAATTACGGCATCTTCTA 59.366 41.667 0.00 0.00 0.00 2.10
374 427 4.264543 TCTAAGTCGGTTCGTTCGTATC 57.735 45.455 0.00 0.00 0.00 2.24
386 739 2.686915 CGTTCGTATCCCTGTTAGGACT 59.313 50.000 0.00 0.00 39.24 3.85
401 783 3.053359 AGGACTTCCCTTCTCCCTATG 57.947 52.381 0.00 0.00 44.85 2.23
423 805 2.923634 TACCCTGCCCTCTCGCTACC 62.924 65.000 0.00 0.00 0.00 3.18
427 813 1.733402 CTGCCCTCTCGCTACCTCTG 61.733 65.000 0.00 0.00 0.00 3.35
475 861 0.865769 AATTCACAAGTCGTGCGACC 59.134 50.000 19.35 4.01 45.92 4.79
486 872 2.048597 TGCGACCTAGCAACCGTG 60.049 61.111 0.00 0.00 45.06 4.94
495 881 1.403679 CTAGCAACCGTGAGAGAGAGG 59.596 57.143 0.00 0.00 0.00 3.69
496 882 0.540830 AGCAACCGTGAGAGAGAGGT 60.541 55.000 0.00 0.00 38.88 3.85
504 893 4.177026 CCGTGAGAGAGAGGTAACAATTG 58.823 47.826 3.24 3.24 41.41 2.32
526 915 4.833380 TGCAACTCTTCTAGTTCTGGTAGT 59.167 41.667 0.00 0.00 45.64 2.73
527 916 5.164954 GCAACTCTTCTAGTTCTGGTAGTG 58.835 45.833 0.00 0.00 45.64 2.74
563 952 0.947244 CTTGTTGCTTCTTCCGCTGT 59.053 50.000 0.00 0.00 0.00 4.40
582 971 6.250527 CCGCTGTTATTTCTTATTTGGTTTCG 59.749 38.462 0.00 0.00 0.00 3.46
591 980 6.687081 TCTTATTTGGTTTCGTTGTCTTGT 57.313 33.333 0.00 0.00 0.00 3.16
612 1013 5.488341 TGTTCTGGTCTCAATACTTTAGCC 58.512 41.667 0.00 0.00 0.00 3.93
623 1024 0.967380 ACTTTAGCCCATGCAGCACC 60.967 55.000 0.00 0.00 41.13 5.01
625 1026 0.680921 TTTAGCCCATGCAGCACCTC 60.681 55.000 0.00 0.00 41.13 3.85
627 1028 0.690744 TAGCCCATGCAGCACCTCTA 60.691 55.000 0.00 0.00 41.13 2.43
630 1031 1.602311 CCCATGCAGCACCTCTATTC 58.398 55.000 0.00 0.00 0.00 1.75
632 1033 2.422519 CCCATGCAGCACCTCTATTCTT 60.423 50.000 0.00 0.00 0.00 2.52
633 1034 2.617308 CCATGCAGCACCTCTATTCTTG 59.383 50.000 0.00 0.00 0.00 3.02
634 1035 3.276857 CATGCAGCACCTCTATTCTTGT 58.723 45.455 0.00 0.00 0.00 3.16
635 1036 4.445453 CATGCAGCACCTCTATTCTTGTA 58.555 43.478 0.00 0.00 0.00 2.41
636 1037 4.128925 TGCAGCACCTCTATTCTTGTAG 57.871 45.455 0.00 0.00 0.00 2.74
639 1040 5.163509 TGCAGCACCTCTATTCTTGTAGTAG 60.164 44.000 0.00 0.00 0.00 2.57
641 1042 5.068460 CAGCACCTCTATTCTTGTAGTAGCT 59.932 44.000 0.00 0.00 0.00 3.32
643 1044 6.488683 AGCACCTCTATTCTTGTAGTAGCTAG 59.511 42.308 0.00 0.00 0.00 3.42
645 1046 7.444792 GCACCTCTATTCTTGTAGTAGCTAGTA 59.555 40.741 4.07 4.07 0.00 1.82
646 1047 9.339850 CACCTCTATTCTTGTAGTAGCTAGTAA 57.660 37.037 9.92 0.00 0.00 2.24
647 1048 9.341078 ACCTCTATTCTTGTAGTAGCTAGTAAC 57.659 37.037 9.92 5.73 0.00 2.50
649 1050 8.954950 TCTATTCTTGTAGTAGCTAGTAACGT 57.045 34.615 9.92 0.00 0.00 3.99
650 1051 8.824781 TCTATTCTTGTAGTAGCTAGTAACGTG 58.175 37.037 9.92 2.22 0.00 4.49
651 1052 5.808042 TCTTGTAGTAGCTAGTAACGTGG 57.192 43.478 9.92 0.70 0.00 4.94
653 1054 5.352569 TCTTGTAGTAGCTAGTAACGTGGTC 59.647 44.000 9.92 0.00 0.00 4.02
654 1055 3.941483 TGTAGTAGCTAGTAACGTGGTCC 59.059 47.826 9.92 0.00 0.00 4.46
656 1057 3.694926 AGTAGCTAGTAACGTGGTCCTT 58.305 45.455 0.00 0.00 0.00 3.36
657 1058 4.085009 AGTAGCTAGTAACGTGGTCCTTT 58.915 43.478 0.00 0.00 0.00 3.11
658 1059 4.525874 AGTAGCTAGTAACGTGGTCCTTTT 59.474 41.667 0.00 0.00 0.00 2.27
659 1060 3.660865 AGCTAGTAACGTGGTCCTTTTG 58.339 45.455 0.00 0.00 0.00 2.44
672 1245 3.447742 GTCCTTTTGCTGTGTTCTTTGG 58.552 45.455 0.00 0.00 0.00 3.28
694 1267 3.070446 GGATATTGGTCGATGGGTGTGTA 59.930 47.826 0.00 0.00 0.00 2.90
701 1274 0.323629 CGATGGGTGTGTACTTGGGT 59.676 55.000 0.00 0.00 0.00 4.51
707 1280 1.674817 GGTGTGTACTTGGGTCGATGG 60.675 57.143 0.00 0.00 0.00 3.51
734 1307 4.065088 CAATGGAGAAAGGAAGTGACGAA 58.935 43.478 0.00 0.00 0.00 3.85
736 1309 3.926616 TGGAGAAAGGAAGTGACGAATC 58.073 45.455 0.00 0.00 0.00 2.52
740 1313 3.006537 AGAAAGGAAGTGACGAATCGGAA 59.993 43.478 7.80 0.00 0.00 4.30
749 1322 8.392612 GGAAGTGACGAATCGGAAAAATAATTA 58.607 33.333 7.80 0.00 0.00 1.40
750 1323 9.422196 GAAGTGACGAATCGGAAAAATAATTAG 57.578 33.333 7.80 0.00 0.00 1.73
751 1324 7.916552 AGTGACGAATCGGAAAAATAATTAGG 58.083 34.615 7.80 0.00 0.00 2.69
752 1325 7.551617 AGTGACGAATCGGAAAAATAATTAGGT 59.448 33.333 7.80 0.00 0.00 3.08
753 1326 8.179615 GTGACGAATCGGAAAAATAATTAGGTT 58.820 33.333 7.80 0.00 0.00 3.50
754 1327 8.732531 TGACGAATCGGAAAAATAATTAGGTTT 58.267 29.630 7.80 0.00 0.00 3.27
755 1328 8.905103 ACGAATCGGAAAAATAATTAGGTTTG 57.095 30.769 7.80 0.00 0.00 2.93
756 1329 8.732531 ACGAATCGGAAAAATAATTAGGTTTGA 58.267 29.630 7.80 0.00 0.00 2.69
757 1330 9.562583 CGAATCGGAAAAATAATTAGGTTTGAA 57.437 29.630 0.00 0.00 0.00 2.69
759 1332 8.926715 ATCGGAAAAATAATTAGGTTTGAAGC 57.073 30.769 1.88 0.00 0.00 3.86
760 1333 8.117813 TCGGAAAAATAATTAGGTTTGAAGCT 57.882 30.769 0.80 0.80 40.36 3.74
761 1334 8.581578 TCGGAAAAATAATTAGGTTTGAAGCTT 58.418 29.630 0.00 0.00 37.92 3.74
762 1335 9.203421 CGGAAAAATAATTAGGTTTGAAGCTTT 57.797 29.630 0.00 0.00 37.92 3.51
821 1394 7.556733 TTTCGTGAAACTAGAAGCCTAAAAA 57.443 32.000 0.00 0.00 31.75 1.94
857 1431 9.578439 TGATAGTATCATCAAGAATAATCTGCG 57.422 33.333 8.84 0.00 32.97 5.18
872 1446 9.376171 GAATAATCTGCGATATATCTGTAGTCG 57.624 37.037 10.93 0.00 35.56 4.18
879 1453 6.091034 TGCGATATATCTGTAGTCGAAGTCTC 59.909 42.308 10.93 0.00 34.46 3.36
890 1464 3.865745 AGTCGAAGTCTCAATATTTGGCG 59.134 43.478 0.00 0.00 0.00 5.69
893 1467 5.462398 GTCGAAGTCTCAATATTTGGCGTAT 59.538 40.000 0.00 0.00 0.00 3.06
897 1471 3.502211 GTCTCAATATTTGGCGTATGGGG 59.498 47.826 0.00 0.00 0.00 4.96
905 1479 3.845259 GCGTATGGGGGTGAGCGA 61.845 66.667 0.00 0.00 0.00 4.93
919 1493 3.684788 GGTGAGCGATTACACTTGATGTT 59.315 43.478 0.00 0.00 43.19 2.71
922 1496 4.864806 TGAGCGATTACACTTGATGTTCTC 59.135 41.667 0.00 0.00 43.19 2.87
923 1497 4.184629 AGCGATTACACTTGATGTTCTCC 58.815 43.478 0.00 0.00 43.19 3.71
924 1498 3.932710 GCGATTACACTTGATGTTCTCCA 59.067 43.478 0.00 0.00 43.19 3.86
928 1502 5.689383 TTACACTTGATGTTCTCCAAAGC 57.311 39.130 0.00 0.00 43.19 3.51
945 1519 8.035394 TCTCCAAAGCATAAGTCACTAAGTTAG 58.965 37.037 8.41 8.41 0.00 2.34
946 1520 7.676947 TCCAAAGCATAAGTCACTAAGTTAGT 58.323 34.615 9.85 9.85 40.28 2.24
1013 1593 1.817099 GCAGGATGGCTCGAACCAG 60.817 63.158 13.86 0.55 44.71 4.00
1039 1619 1.272490 CAGCTCGTAACTCCACTGGAA 59.728 52.381 0.00 0.00 0.00 3.53
1045 1625 2.561419 CGTAACTCCACTGGAAGGAAGA 59.439 50.000 0.00 0.00 39.30 2.87
1094 1953 8.589335 TTCTATGTAATATTTCTCAGTTCGCC 57.411 34.615 0.00 0.00 0.00 5.54
1107 1966 5.303333 TCTCAGTTCGCCACATATAATACCA 59.697 40.000 0.00 0.00 0.00 3.25
1108 1967 6.014584 TCTCAGTTCGCCACATATAATACCAT 60.015 38.462 0.00 0.00 0.00 3.55
1110 1969 5.700832 CAGTTCGCCACATATAATACCATGT 59.299 40.000 0.00 0.00 35.79 3.21
1112 1971 6.204688 AGTTCGCCACATATAATACCATGTTG 59.795 38.462 0.00 0.00 33.12 3.33
1124 1983 8.893219 ATAATACCATGTTGCTATATGATCCG 57.107 34.615 6.46 0.00 0.00 4.18
1132 1991 5.303333 TGTTGCTATATGATCCGAACCACTA 59.697 40.000 0.00 0.00 0.00 2.74
1202 2061 0.461339 TTCCTTTGCGACGATAGGCC 60.461 55.000 0.00 0.00 46.50 5.19
1217 2076 4.494400 GCCGCCGCTCGTAAAACG 62.494 66.667 0.00 0.00 44.19 3.60
1226 2085 0.669318 CTCGTAAAACGGCTCCAGCA 60.669 55.000 0.03 0.00 42.81 4.41
1227 2086 0.249953 TCGTAAAACGGCTCCAGCAA 60.250 50.000 0.03 0.00 42.81 3.91
1228 2087 0.110373 CGTAAAACGGCTCCAGCAAC 60.110 55.000 0.03 0.00 44.36 4.17
1229 2088 1.235724 GTAAAACGGCTCCAGCAACT 58.764 50.000 0.03 0.00 44.36 3.16
1230 2089 1.069227 GTAAAACGGCTCCAGCAACTG 60.069 52.381 0.03 0.00 44.36 3.16
1241 2100 1.517242 CAGCAACTGGAGGAGTCAAC 58.483 55.000 0.00 0.00 31.73 3.18
1242 2101 0.398318 AGCAACTGGAGGAGTCAACC 59.602 55.000 0.00 0.00 31.73 3.77
1243 2102 0.951040 GCAACTGGAGGAGTCAACCG 60.951 60.000 0.00 0.00 31.73 4.44
1244 2103 0.951040 CAACTGGAGGAGTCAACCGC 60.951 60.000 0.00 0.00 31.73 5.68
1245 2104 1.407656 AACTGGAGGAGTCAACCGCA 61.408 55.000 0.00 0.00 31.73 5.69
1246 2105 1.371183 CTGGAGGAGTCAACCGCAA 59.629 57.895 0.00 0.00 34.73 4.85
1247 2106 0.250295 CTGGAGGAGTCAACCGCAAA 60.250 55.000 0.00 0.00 34.73 3.68
1248 2107 0.181587 TGGAGGAGTCAACCGCAAAA 59.818 50.000 0.00 0.00 34.73 2.44
1249 2108 1.314730 GGAGGAGTCAACCGCAAAAA 58.685 50.000 0.00 0.00 34.73 1.94
1250 2109 1.886542 GGAGGAGTCAACCGCAAAAAT 59.113 47.619 0.00 0.00 34.73 1.82
1251 2110 3.078837 GGAGGAGTCAACCGCAAAAATA 58.921 45.455 0.00 0.00 34.73 1.40
1252 2111 3.504520 GGAGGAGTCAACCGCAAAAATAA 59.495 43.478 0.00 0.00 34.73 1.40
1253 2112 4.022676 GGAGGAGTCAACCGCAAAAATAAA 60.023 41.667 0.00 0.00 34.73 1.40
1254 2113 5.508320 GGAGGAGTCAACCGCAAAAATAAAA 60.508 40.000 0.00 0.00 34.73 1.52
1255 2114 5.908341 AGGAGTCAACCGCAAAAATAAAAA 58.092 33.333 0.00 0.00 34.73 1.94
1256 2115 5.983118 AGGAGTCAACCGCAAAAATAAAAAG 59.017 36.000 0.00 0.00 34.73 2.27
1257 2116 5.980715 GGAGTCAACCGCAAAAATAAAAAGA 59.019 36.000 0.00 0.00 0.00 2.52
1258 2117 6.477360 GGAGTCAACCGCAAAAATAAAAAGAA 59.523 34.615 0.00 0.00 0.00 2.52
1259 2118 7.010645 GGAGTCAACCGCAAAAATAAAAAGAAA 59.989 33.333 0.00 0.00 0.00 2.52
1260 2119 8.257830 AGTCAACCGCAAAAATAAAAAGAAAA 57.742 26.923 0.00 0.00 0.00 2.29
1261 2120 8.722394 AGTCAACCGCAAAAATAAAAAGAAAAA 58.278 25.926 0.00 0.00 0.00 1.94
1282 2141 4.779993 AAAACTGGAGGAGTCAAGAAGT 57.220 40.909 0.00 0.00 31.73 3.01
1327 2186 2.401583 TGCTCTTCGGTATGTGCAAT 57.598 45.000 0.00 0.00 31.15 3.56
1388 2247 3.733709 CCTTGTGAGGTTCTTGCCT 57.266 52.632 0.00 0.00 42.53 4.75
1392 2251 1.593196 TGTGAGGTTCTTGCCTTTCG 58.407 50.000 0.00 0.00 39.34 3.46
1436 2295 1.134699 TCGCAAGTATCAGAAGGGCAG 60.135 52.381 0.00 0.00 39.48 4.85
1485 2344 0.827368 AAAGGCTCGTCAGGGAGATC 59.173 55.000 0.00 0.00 36.08 2.75
1509 2368 5.461526 GCTCAAGTTTTCAAGGTACAATCC 58.538 41.667 0.00 0.00 0.00 3.01
1510 2369 5.009610 GCTCAAGTTTTCAAGGTACAATCCA 59.990 40.000 0.00 0.00 0.00 3.41
1533 2412 7.283807 TCCATTTGGATCACTTGAGATACATTG 59.716 37.037 0.00 0.00 38.59 2.82
1555 2434 0.849417 ATCCAGCTCAATCCCTTCCC 59.151 55.000 0.00 0.00 0.00 3.97
1556 2435 1.228510 CCAGCTCAATCCCTTCCCC 59.771 63.158 0.00 0.00 0.00 4.81
1636 2531 5.613358 AGTAGTTGTGCTTACAATGCTTC 57.387 39.130 0.00 0.00 31.79 3.86
1837 2741 5.106475 GCGAGAGGATGTAATTCGTCTAGAT 60.106 44.000 0.00 0.00 40.07 1.98
1908 2821 1.073125 TGACGGATGGTGGACAACAAT 59.927 47.619 0.00 0.00 0.00 2.71
1921 2834 5.348451 GTGGACAACAATTTTGATATGCCAC 59.652 40.000 0.00 0.00 34.61 5.01
1930 2843 5.554822 TTTTGATATGCCACGGAAGTTAC 57.445 39.130 0.00 0.00 46.40 2.50
1989 2903 9.392259 AGTATATAGTAGCGTATGCATTGTCTA 57.608 33.333 3.54 0.87 46.23 2.59
2004 2918 5.699839 CATTGTCTAGTGCCAAAACCTTAC 58.300 41.667 0.00 0.00 0.00 2.34
2013 2927 5.815222 AGTGCCAAAACCTTACAAATTTGAC 59.185 36.000 24.64 7.36 35.34 3.18
2043 2957 7.745015 GTTCCGCTGAACTGTATACAAAATTA 58.255 34.615 13.17 0.00 46.03 1.40
2092 3013 7.452880 ACAGCAACACATATACACAGATTTT 57.547 32.000 0.00 0.00 0.00 1.82
2172 3093 6.127647 TGGACAAGATCAACCTTTGCATAATC 60.128 38.462 0.00 0.00 0.00 1.75
2220 3141 4.621034 CACAAGTGTCAGTTTGTTTGGTTC 59.379 41.667 0.94 0.00 35.46 3.62
2229 3150 1.686355 TTGTTTGGTTCGAGCCATGT 58.314 45.000 22.46 0.00 38.48 3.21
2230 3151 1.686355 TGTTTGGTTCGAGCCATGTT 58.314 45.000 22.46 0.00 38.48 2.71
2231 3152 2.852449 TGTTTGGTTCGAGCCATGTTA 58.148 42.857 22.46 3.85 38.48 2.41
2252 3173 0.310543 TGTTCCATCAACACTTGCGC 59.689 50.000 0.00 0.00 40.29 6.09
2304 3225 2.717580 AAAGTCACGACTGCGATACA 57.282 45.000 0.00 0.00 41.58 2.29
2323 3244 2.761208 ACAACCACAACCGAAAATGGAA 59.239 40.909 0.00 0.00 36.04 3.53
2325 3246 1.339929 ACCACAACCGAAAATGGAAGC 59.660 47.619 0.00 0.00 36.04 3.86
2408 3340 8.055181 AGCCCAGAAAATAACAATAAGATCTCA 58.945 33.333 0.00 0.00 0.00 3.27
2439 3371 4.563337 AGTGATAATTAGTAGACGCGCA 57.437 40.909 5.73 0.00 0.00 6.09
2475 3410 0.454600 TAGTCAACTCGTCGATGGCC 59.545 55.000 4.48 0.00 0.00 5.36
2487 3422 0.321671 CGATGGCCGTCCTATCCAAT 59.678 55.000 19.51 0.00 33.04 3.16
2493 3428 1.502231 CCGTCCTATCCAATCGCTTG 58.498 55.000 0.00 0.00 0.00 4.01
2508 3443 1.246737 GCTTGTTGAGGGGCTTCCAG 61.247 60.000 0.00 0.00 38.24 3.86
2519 3454 4.639776 CTTCCAGAGCTGCAGCAT 57.360 55.556 38.24 24.58 45.16 3.79
2520 3455 3.774616 CTTCCAGAGCTGCAGCATA 57.225 52.632 38.24 16.79 45.16 3.14
2521 3456 2.034104 CTTCCAGAGCTGCAGCATAA 57.966 50.000 38.24 22.17 45.16 1.90
2522 3457 2.362736 CTTCCAGAGCTGCAGCATAAA 58.637 47.619 38.24 22.47 45.16 1.40
2523 3458 2.495155 TCCAGAGCTGCAGCATAAAA 57.505 45.000 38.24 18.94 45.16 1.52
2524 3459 2.362736 TCCAGAGCTGCAGCATAAAAG 58.637 47.619 38.24 21.54 45.16 2.27
2525 3460 2.089980 CCAGAGCTGCAGCATAAAAGT 58.910 47.619 38.24 17.87 45.16 2.66
2526 3461 2.097142 CCAGAGCTGCAGCATAAAAGTC 59.903 50.000 38.24 24.82 45.16 3.01
2527 3462 2.745821 CAGAGCTGCAGCATAAAAGTCA 59.254 45.455 38.24 0.00 45.16 3.41
2528 3463 3.377485 CAGAGCTGCAGCATAAAAGTCAT 59.623 43.478 38.24 15.47 45.16 3.06
2529 3464 3.377485 AGAGCTGCAGCATAAAAGTCATG 59.623 43.478 38.24 0.00 45.16 3.07
2530 3465 3.349927 AGCTGCAGCATAAAAGTCATGA 58.650 40.909 38.24 0.00 45.16 3.07
2531 3466 3.377485 AGCTGCAGCATAAAAGTCATGAG 59.623 43.478 38.24 0.00 45.16 2.90
2532 3467 3.488721 GCTGCAGCATAAAAGTCATGAGG 60.489 47.826 33.36 0.00 41.59 3.86
2533 3468 3.943381 CTGCAGCATAAAAGTCATGAGGA 59.057 43.478 0.00 0.00 0.00 3.71
2534 3469 7.656397 GCTGCAGCATAAAAGTCATGAGGAC 62.656 48.000 33.36 0.00 43.15 3.85
2544 3479 3.011566 GTCATGAGGACTCTGAGGAGA 57.988 52.381 9.85 0.00 43.46 3.71
2545 3480 3.565307 GTCATGAGGACTCTGAGGAGAT 58.435 50.000 9.85 0.00 43.46 2.75
2546 3481 3.318839 GTCATGAGGACTCTGAGGAGATG 59.681 52.174 9.85 4.28 43.46 2.90
2547 3482 1.774110 TGAGGACTCTGAGGAGATGC 58.226 55.000 9.85 0.00 41.86 3.91
2548 3483 1.006400 TGAGGACTCTGAGGAGATGCA 59.994 52.381 9.85 0.00 41.86 3.96
2549 3484 1.682854 GAGGACTCTGAGGAGATGCAG 59.317 57.143 9.85 0.00 41.86 4.41
2550 3485 0.752054 GGACTCTGAGGAGATGCAGG 59.248 60.000 9.85 0.00 41.86 4.85
2551 3486 1.687682 GGACTCTGAGGAGATGCAGGA 60.688 57.143 9.85 0.00 41.86 3.86
2552 3487 2.318908 GACTCTGAGGAGATGCAGGAT 58.681 52.381 9.85 0.00 41.86 3.24
2553 3488 3.495331 GACTCTGAGGAGATGCAGGATA 58.505 50.000 9.85 0.00 41.86 2.59
2554 3489 3.894427 GACTCTGAGGAGATGCAGGATAA 59.106 47.826 9.85 0.00 41.86 1.75
2555 3490 4.293494 ACTCTGAGGAGATGCAGGATAAA 58.707 43.478 9.85 0.00 41.86 1.40
2556 3491 4.100808 ACTCTGAGGAGATGCAGGATAAAC 59.899 45.833 9.85 0.00 41.86 2.01
2557 3492 3.389329 TCTGAGGAGATGCAGGATAAACC 59.611 47.826 0.00 0.00 39.35 3.27
2558 3493 3.114606 TGAGGAGATGCAGGATAAACCA 58.885 45.455 0.00 0.00 42.04 3.67
2559 3494 3.523157 TGAGGAGATGCAGGATAAACCAA 59.477 43.478 0.00 0.00 42.04 3.67
2560 3495 4.018506 TGAGGAGATGCAGGATAAACCAAA 60.019 41.667 0.00 0.00 42.04 3.28
2561 3496 4.934356 AGGAGATGCAGGATAAACCAAAA 58.066 39.130 0.00 0.00 42.04 2.44
2562 3497 4.706962 AGGAGATGCAGGATAAACCAAAAC 59.293 41.667 0.00 0.00 42.04 2.43
2563 3498 4.462483 GGAGATGCAGGATAAACCAAAACA 59.538 41.667 0.00 0.00 42.04 2.83
2564 3499 5.047377 GGAGATGCAGGATAAACCAAAACAA 60.047 40.000 0.00 0.00 42.04 2.83
2565 3500 6.351286 GGAGATGCAGGATAAACCAAAACAAT 60.351 38.462 0.00 0.00 42.04 2.71
2566 3501 6.633856 AGATGCAGGATAAACCAAAACAATC 58.366 36.000 0.00 0.00 42.04 2.67
2567 3502 5.146010 TGCAGGATAAACCAAAACAATCC 57.854 39.130 0.00 0.00 42.04 3.01
2568 3503 4.837860 TGCAGGATAAACCAAAACAATCCT 59.162 37.500 0.00 0.00 45.78 3.24
2571 3506 5.650283 AGGATAAACCAAAACAATCCTGGA 58.350 37.500 0.00 0.00 43.74 3.86
2572 3507 6.081356 AGGATAAACCAAAACAATCCTGGAA 58.919 36.000 0.00 0.00 43.74 3.53
2573 3508 6.211384 AGGATAAACCAAAACAATCCTGGAAG 59.789 38.462 0.00 0.00 43.74 3.46
2574 3509 6.210584 GGATAAACCAAAACAATCCTGGAAGA 59.789 38.462 0.00 0.00 38.79 2.87
2575 3510 5.535753 AAACCAAAACAATCCTGGAAGAG 57.464 39.130 0.00 0.00 34.07 2.85
2576 3511 3.500343 ACCAAAACAATCCTGGAAGAGG 58.500 45.455 0.00 0.00 44.45 3.69
2587 3522 4.157849 CCTGGAAGAGGAAGGTTTATCC 57.842 50.000 0.00 0.00 46.33 2.59
2600 3535 5.662674 AGGTTTATCCTATATCGGCAGTC 57.337 43.478 0.00 0.00 46.10 3.51
2601 3536 4.466726 AGGTTTATCCTATATCGGCAGTCC 59.533 45.833 0.00 0.00 46.10 3.85
2602 3537 4.222145 GGTTTATCCTATATCGGCAGTCCA 59.778 45.833 0.00 0.00 0.00 4.02
2603 3538 5.104900 GGTTTATCCTATATCGGCAGTCCAT 60.105 44.000 0.00 0.00 0.00 3.41
2604 3539 6.097839 GGTTTATCCTATATCGGCAGTCCATA 59.902 42.308 0.00 0.00 0.00 2.74
2605 3540 6.961360 TTATCCTATATCGGCAGTCCATAG 57.039 41.667 0.00 0.00 0.00 2.23
2606 3541 4.586306 TCCTATATCGGCAGTCCATAGA 57.414 45.455 0.00 0.00 0.00 1.98
2607 3542 4.930696 TCCTATATCGGCAGTCCATAGAA 58.069 43.478 0.00 0.00 0.00 2.10
2608 3543 4.950475 TCCTATATCGGCAGTCCATAGAAG 59.050 45.833 0.00 0.00 0.00 2.85
2609 3544 4.707448 CCTATATCGGCAGTCCATAGAAGT 59.293 45.833 0.00 0.00 0.00 3.01
2610 3545 2.898729 ATCGGCAGTCCATAGAAGTG 57.101 50.000 0.00 0.00 0.00 3.16
2611 3546 1.557099 TCGGCAGTCCATAGAAGTGT 58.443 50.000 0.00 0.00 0.00 3.55
2612 3547 1.204704 TCGGCAGTCCATAGAAGTGTG 59.795 52.381 0.00 0.00 0.00 3.82
2613 3548 1.204704 CGGCAGTCCATAGAAGTGTGA 59.795 52.381 0.00 0.00 0.00 3.58
2614 3549 2.736719 CGGCAGTCCATAGAAGTGTGAG 60.737 54.545 0.00 0.00 0.00 3.51
2615 3550 2.497675 GGCAGTCCATAGAAGTGTGAGA 59.502 50.000 0.00 0.00 0.00 3.27
2616 3551 3.430098 GGCAGTCCATAGAAGTGTGAGAG 60.430 52.174 0.00 0.00 0.00 3.20
2617 3552 3.194542 GCAGTCCATAGAAGTGTGAGAGT 59.805 47.826 0.00 0.00 0.00 3.24
2618 3553 4.322349 GCAGTCCATAGAAGTGTGAGAGTT 60.322 45.833 0.00 0.00 0.00 3.01
2619 3554 5.105716 GCAGTCCATAGAAGTGTGAGAGTTA 60.106 44.000 0.00 0.00 0.00 2.24
2620 3555 6.559810 CAGTCCATAGAAGTGTGAGAGTTAG 58.440 44.000 0.00 0.00 0.00 2.34
2621 3556 5.654650 AGTCCATAGAAGTGTGAGAGTTAGG 59.345 44.000 0.00 0.00 0.00 2.69
2622 3557 4.402793 TCCATAGAAGTGTGAGAGTTAGGC 59.597 45.833 0.00 0.00 0.00 3.93
2623 3558 4.355437 CATAGAAGTGTGAGAGTTAGGCG 58.645 47.826 0.00 0.00 0.00 5.52
2624 3559 2.515854 AGAAGTGTGAGAGTTAGGCGA 58.484 47.619 0.00 0.00 0.00 5.54
2625 3560 2.891580 AGAAGTGTGAGAGTTAGGCGAA 59.108 45.455 0.00 0.00 0.00 4.70
2626 3561 3.321111 AGAAGTGTGAGAGTTAGGCGAAA 59.679 43.478 0.00 0.00 0.00 3.46
2627 3562 3.305398 AGTGTGAGAGTTAGGCGAAAG 57.695 47.619 0.00 0.00 0.00 2.62
2628 3563 2.891580 AGTGTGAGAGTTAGGCGAAAGA 59.108 45.455 0.00 0.00 0.00 2.52
2629 3564 3.321111 AGTGTGAGAGTTAGGCGAAAGAA 59.679 43.478 0.00 0.00 0.00 2.52
2630 3565 4.056050 GTGTGAGAGTTAGGCGAAAGAAA 58.944 43.478 0.00 0.00 0.00 2.52
2631 3566 4.510340 GTGTGAGAGTTAGGCGAAAGAAAA 59.490 41.667 0.00 0.00 0.00 2.29
2632 3567 5.007332 GTGTGAGAGTTAGGCGAAAGAAAAA 59.993 40.000 0.00 0.00 0.00 1.94
2659 3594 9.825109 ATTCATGATGAAAAATACATTCATGCA 57.175 25.926 12.36 0.00 45.11 3.96
2660 3595 9.654663 TTCATGATGAAAAATACATTCATGCAA 57.345 25.926 5.21 0.78 45.11 4.08
2661 3596 9.089601 TCATGATGAAAAATACATTCATGCAAC 57.910 29.630 6.49 0.00 45.11 4.17
2662 3597 7.509050 TGATGAAAAATACATTCATGCAACG 57.491 32.000 6.49 0.00 45.11 4.10
2663 3598 7.089538 TGATGAAAAATACATTCATGCAACGT 58.910 30.769 6.49 0.00 45.11 3.99
2664 3599 7.598118 TGATGAAAAATACATTCATGCAACGTT 59.402 29.630 6.49 0.00 45.11 3.99
2665 3600 8.978564 ATGAAAAATACATTCATGCAACGTTA 57.021 26.923 0.00 0.00 43.85 3.18
2666 3601 8.221801 TGAAAAATACATTCATGCAACGTTAC 57.778 30.769 0.00 0.00 32.10 2.50
2667 3602 7.327275 TGAAAAATACATTCATGCAACGTTACC 59.673 33.333 0.00 0.00 32.10 2.85
2668 3603 4.893424 ATACATTCATGCAACGTTACCC 57.107 40.909 0.00 0.00 0.00 3.69
2669 3604 2.509569 ACATTCATGCAACGTTACCCA 58.490 42.857 0.00 0.00 0.00 4.51
2670 3605 3.088532 ACATTCATGCAACGTTACCCAT 58.911 40.909 0.00 1.30 0.00 4.00
2671 3606 3.128589 ACATTCATGCAACGTTACCCATC 59.871 43.478 0.00 0.00 0.00 3.51
2672 3607 2.481289 TCATGCAACGTTACCCATCA 57.519 45.000 0.00 0.00 0.00 3.07
2673 3608 2.355197 TCATGCAACGTTACCCATCAG 58.645 47.619 0.00 0.00 0.00 2.90
2674 3609 2.027653 TCATGCAACGTTACCCATCAGA 60.028 45.455 0.00 0.00 0.00 3.27
2675 3610 2.093306 TGCAACGTTACCCATCAGAG 57.907 50.000 0.00 0.00 0.00 3.35
2676 3611 1.346395 TGCAACGTTACCCATCAGAGT 59.654 47.619 0.00 0.00 0.00 3.24
2677 3612 1.732259 GCAACGTTACCCATCAGAGTG 59.268 52.381 0.00 0.00 0.00 3.51
2678 3613 2.870435 GCAACGTTACCCATCAGAGTGT 60.870 50.000 0.00 0.00 0.00 3.55
2679 3614 3.399330 CAACGTTACCCATCAGAGTGTT 58.601 45.455 0.00 0.00 0.00 3.32
2680 3615 3.314541 ACGTTACCCATCAGAGTGTTC 57.685 47.619 0.00 0.00 0.00 3.18
2681 3616 2.631062 ACGTTACCCATCAGAGTGTTCA 59.369 45.455 0.00 0.00 0.00 3.18
2682 3617 3.260884 ACGTTACCCATCAGAGTGTTCAT 59.739 43.478 0.00 0.00 0.00 2.57
2683 3618 4.464951 ACGTTACCCATCAGAGTGTTCATA 59.535 41.667 0.00 0.00 0.00 2.15
2684 3619 5.128827 ACGTTACCCATCAGAGTGTTCATAT 59.871 40.000 0.00 0.00 0.00 1.78
2685 3620 6.049149 CGTTACCCATCAGAGTGTTCATATT 58.951 40.000 0.00 0.00 0.00 1.28
2686 3621 7.147794 ACGTTACCCATCAGAGTGTTCATATTA 60.148 37.037 0.00 0.00 0.00 0.98
2687 3622 7.169308 CGTTACCCATCAGAGTGTTCATATTAC 59.831 40.741 0.00 0.00 0.00 1.89
2688 3623 6.560003 ACCCATCAGAGTGTTCATATTACA 57.440 37.500 0.00 0.00 0.00 2.41
2689 3624 6.957631 ACCCATCAGAGTGTTCATATTACAA 58.042 36.000 0.00 0.00 0.00 2.41
2690 3625 7.577303 ACCCATCAGAGTGTTCATATTACAAT 58.423 34.615 0.00 0.00 0.00 2.71
2691 3626 8.713971 ACCCATCAGAGTGTTCATATTACAATA 58.286 33.333 0.00 0.00 0.00 1.90
2692 3627 9.730705 CCCATCAGAGTGTTCATATTACAATAT 57.269 33.333 0.00 0.00 31.93 1.28
2696 3631 9.264719 TCAGAGTGTTCATATTACAATATGCTG 57.735 33.333 14.49 13.84 44.96 4.41
2697 3632 9.264719 CAGAGTGTTCATATTACAATATGCTGA 57.735 33.333 14.49 0.00 44.96 4.26
2700 3635 9.783081 AGTGTTCATATTACAATATGCTGATGA 57.217 29.630 14.49 0.00 44.96 2.92
2701 3636 9.817365 GTGTTCATATTACAATATGCTGATGAC 57.183 33.333 14.49 8.26 44.96 3.06
2702 3637 9.558396 TGTTCATATTACAATATGCTGATGACA 57.442 29.630 14.49 9.96 44.96 3.58
2734 3669 3.391965 TGGAACATGACATTGCAAAAGC 58.608 40.909 1.71 0.00 0.00 3.51
2735 3670 3.069872 TGGAACATGACATTGCAAAAGCT 59.930 39.130 1.71 0.00 0.00 3.74
2736 3671 4.280425 TGGAACATGACATTGCAAAAGCTA 59.720 37.500 1.71 0.00 0.00 3.32
2737 3672 4.860907 GGAACATGACATTGCAAAAGCTAG 59.139 41.667 1.71 0.00 0.00 3.42
2738 3673 5.335897 GGAACATGACATTGCAAAAGCTAGA 60.336 40.000 1.71 0.00 0.00 2.43
2739 3674 5.710513 ACATGACATTGCAAAAGCTAGAA 57.289 34.783 1.71 0.00 0.00 2.10
2740 3675 6.088016 ACATGACATTGCAAAAGCTAGAAA 57.912 33.333 1.71 0.00 0.00 2.52
2741 3676 6.694447 ACATGACATTGCAAAAGCTAGAAAT 58.306 32.000 1.71 0.00 0.00 2.17
2742 3677 7.829725 ACATGACATTGCAAAAGCTAGAAATA 58.170 30.769 1.71 0.00 0.00 1.40
2743 3678 8.472413 ACATGACATTGCAAAAGCTAGAAATAT 58.528 29.630 1.71 0.00 0.00 1.28
2744 3679 8.752254 CATGACATTGCAAAAGCTAGAAATATG 58.248 33.333 1.71 0.00 0.00 1.78
2745 3680 8.054152 TGACATTGCAAAAGCTAGAAATATGA 57.946 30.769 1.71 0.00 0.00 2.15
2746 3681 8.522003 TGACATTGCAAAAGCTAGAAATATGAA 58.478 29.630 1.71 0.00 0.00 2.57
2747 3682 8.922058 ACATTGCAAAAGCTAGAAATATGAAG 57.078 30.769 1.71 0.00 0.00 3.02
2748 3683 7.490402 ACATTGCAAAAGCTAGAAATATGAAGC 59.510 33.333 1.71 0.00 35.16 3.86
2749 3684 6.764308 TGCAAAAGCTAGAAATATGAAGCT 57.236 33.333 0.00 0.00 46.96 3.74
2750 3685 7.864108 TGCAAAAGCTAGAAATATGAAGCTA 57.136 32.000 0.00 0.00 44.30 3.32
2751 3686 7.923888 TGCAAAAGCTAGAAATATGAAGCTAG 58.076 34.615 0.00 0.00 44.30 3.42
2752 3687 7.554118 TGCAAAAGCTAGAAATATGAAGCTAGT 59.446 33.333 0.00 0.00 44.30 2.57
2753 3688 7.854916 GCAAAAGCTAGAAATATGAAGCTAGTG 59.145 37.037 0.00 0.00 44.30 2.74
2754 3689 7.489574 AAAGCTAGAAATATGAAGCTAGTGC 57.510 36.000 0.00 0.00 44.30 4.40
2769 3704 5.999483 GCTAGTGCTTTGCTTATTTGAAC 57.001 39.130 0.00 0.00 36.03 3.18
2770 3705 5.460646 GCTAGTGCTTTGCTTATTTGAACA 58.539 37.500 0.00 0.00 36.03 3.18
2771 3706 5.920273 GCTAGTGCTTTGCTTATTTGAACAA 59.080 36.000 0.00 0.00 36.03 2.83
2772 3707 6.587608 GCTAGTGCTTTGCTTATTTGAACAAT 59.412 34.615 0.00 0.00 36.03 2.71
2773 3708 7.116805 GCTAGTGCTTTGCTTATTTGAACAATT 59.883 33.333 0.00 0.00 36.03 2.32
2774 3709 7.181143 AGTGCTTTGCTTATTTGAACAATTG 57.819 32.000 3.24 3.24 0.00 2.32
2775 3710 6.762661 AGTGCTTTGCTTATTTGAACAATTGT 59.237 30.769 4.92 4.92 0.00 2.71
2776 3711 7.042523 AGTGCTTTGCTTATTTGAACAATTGTC 60.043 33.333 12.39 6.33 0.00 3.18
2777 3712 6.074409 TGCTTTGCTTATTTGAACAATTGTCG 60.074 34.615 12.39 0.00 0.00 4.35
2778 3713 6.616260 GCTTTGCTTATTTGAACAATTGTCGG 60.616 38.462 12.39 0.00 0.00 4.79
2779 3714 4.804108 TGCTTATTTGAACAATTGTCGGG 58.196 39.130 12.39 0.00 0.00 5.14
2780 3715 4.520874 TGCTTATTTGAACAATTGTCGGGA 59.479 37.500 12.39 0.00 0.00 5.14
2781 3716 4.857037 GCTTATTTGAACAATTGTCGGGAC 59.143 41.667 12.39 2.61 0.00 4.46
2782 3717 5.335661 GCTTATTTGAACAATTGTCGGGACT 60.336 40.000 12.39 0.00 0.00 3.85
2783 3718 4.766404 ATTTGAACAATTGTCGGGACTC 57.234 40.909 12.39 5.15 0.00 3.36
2784 3719 2.920724 TGAACAATTGTCGGGACTCA 57.079 45.000 12.39 7.91 0.00 3.41
2785 3720 3.201353 TGAACAATTGTCGGGACTCAA 57.799 42.857 12.39 0.00 0.00 3.02
2786 3721 3.546724 TGAACAATTGTCGGGACTCAAA 58.453 40.909 12.39 0.00 0.00 2.69
2787 3722 3.948473 TGAACAATTGTCGGGACTCAAAA 59.052 39.130 12.39 0.00 0.00 2.44
2788 3723 4.582656 TGAACAATTGTCGGGACTCAAAAT 59.417 37.500 12.39 0.00 0.00 1.82
2789 3724 5.068460 TGAACAATTGTCGGGACTCAAAATT 59.932 36.000 12.39 0.00 0.00 1.82
2790 3725 6.263392 TGAACAATTGTCGGGACTCAAAATTA 59.737 34.615 12.39 0.00 0.00 1.40
2791 3726 6.642707 ACAATTGTCGGGACTCAAAATTAA 57.357 33.333 4.92 0.00 0.00 1.40
2792 3727 7.227049 ACAATTGTCGGGACTCAAAATTAAT 57.773 32.000 4.92 0.00 0.00 1.40
2793 3728 7.666623 ACAATTGTCGGGACTCAAAATTAATT 58.333 30.769 4.92 0.00 0.00 1.40
2794 3729 8.147704 ACAATTGTCGGGACTCAAAATTAATTT 58.852 29.630 4.92 7.64 0.00 1.82
2795 3730 8.987890 CAATTGTCGGGACTCAAAATTAATTTT 58.012 29.630 18.40 18.40 40.37 1.82
2798 3733 9.465985 TTGTCGGGACTCAAAATTAATTTTAAC 57.534 29.630 22.44 14.38 37.86 2.01
2799 3734 8.630917 TGTCGGGACTCAAAATTAATTTTAACA 58.369 29.630 22.44 14.02 37.86 2.41
2800 3735 9.465985 GTCGGGACTCAAAATTAATTTTAACAA 57.534 29.630 22.44 10.14 37.86 2.83
2816 3751 7.820044 TTTTAACAAAAGCGAATTGTTCTGT 57.180 28.000 16.98 1.72 45.27 3.41
2817 3752 7.820044 TTTAACAAAAGCGAATTGTTCTGTT 57.180 28.000 16.98 6.81 45.27 3.16
2818 3753 7.820044 TTAACAAAAGCGAATTGTTCTGTTT 57.180 28.000 16.98 0.87 45.27 2.83
2819 3754 6.720012 AACAAAAGCGAATTGTTCTGTTTT 57.280 29.167 10.47 0.00 45.27 2.43
2820 3755 6.093532 ACAAAAGCGAATTGTTCTGTTTTG 57.906 33.333 16.49 16.49 37.74 2.44
2821 3756 5.063312 ACAAAAGCGAATTGTTCTGTTTTGG 59.937 36.000 19.36 10.73 37.74 3.28
2822 3757 3.369546 AGCGAATTGTTCTGTTTTGGG 57.630 42.857 0.00 0.00 0.00 4.12
2823 3758 2.955660 AGCGAATTGTTCTGTTTTGGGA 59.044 40.909 0.00 0.00 0.00 4.37
2824 3759 3.004734 AGCGAATTGTTCTGTTTTGGGAG 59.995 43.478 0.00 0.00 0.00 4.30
2825 3760 3.004315 GCGAATTGTTCTGTTTTGGGAGA 59.996 43.478 0.00 0.00 0.00 3.71
2826 3761 4.787598 CGAATTGTTCTGTTTTGGGAGAG 58.212 43.478 0.00 0.00 0.00 3.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.448632 GGACACAATCGTTCCATTATTCCAC 60.449 44.000 0.00 0.00 0.00 4.02
1 2 4.638421 GGACACAATCGTTCCATTATTCCA 59.362 41.667 0.00 0.00 0.00 3.53
3 4 4.331717 ACGGACACAATCGTTCCATTATTC 59.668 41.667 0.00 0.00 36.04 1.75
4 5 4.258543 ACGGACACAATCGTTCCATTATT 58.741 39.130 0.00 0.00 36.04 1.40
6 7 3.255725 GACGGACACAATCGTTCCATTA 58.744 45.455 0.00 0.00 39.88 1.90
7 8 2.073816 GACGGACACAATCGTTCCATT 58.926 47.619 0.00 0.00 39.88 3.16
8 9 1.674817 GGACGGACACAATCGTTCCAT 60.675 52.381 0.00 0.00 39.88 3.41
10 11 1.349259 CGGACGGACACAATCGTTCC 61.349 60.000 0.00 0.00 39.88 3.62
11 12 0.665369 ACGGACGGACACAATCGTTC 60.665 55.000 0.00 0.00 39.88 3.95
12 13 0.597568 TACGGACGGACACAATCGTT 59.402 50.000 0.00 0.00 39.88 3.85
13 14 0.109597 GTACGGACGGACACAATCGT 60.110 55.000 1.54 0.00 42.67 3.73
14 15 1.129879 CGTACGGACGGACACAATCG 61.130 60.000 13.75 0.00 45.63 3.34
15 16 2.645411 CGTACGGACGGACACAATC 58.355 57.895 13.75 0.00 45.63 2.67
16 17 4.874534 CGTACGGACGGACACAAT 57.125 55.556 13.75 0.00 45.63 2.71
25 26 2.095847 TTGGATTGCGCGTACGGAC 61.096 57.895 18.39 0.00 40.33 4.79
26 27 2.095847 GTTGGATTGCGCGTACGGA 61.096 57.895 18.39 0.00 40.57 4.69
27 28 2.398036 GTTGGATTGCGCGTACGG 59.602 61.111 18.39 8.37 40.57 4.02
28 29 2.019476 CGTTGGATTGCGCGTACG 59.981 61.111 11.84 11.84 44.07 3.67
29 30 1.903783 AACCGTTGGATTGCGCGTAC 61.904 55.000 8.43 0.00 0.00 3.67
30 31 1.668472 AACCGTTGGATTGCGCGTA 60.668 52.632 8.43 0.00 0.00 4.42
31 32 2.975799 AACCGTTGGATTGCGCGT 60.976 55.556 8.43 0.00 0.00 6.01
32 33 2.501650 CAACCGTTGGATTGCGCG 60.502 61.111 0.00 0.00 0.00 6.86
41 42 1.394618 TTTGAACTCCCCAACCGTTG 58.605 50.000 4.12 4.12 0.00 4.10
42 43 2.235891 GATTTGAACTCCCCAACCGTT 58.764 47.619 0.00 0.00 0.00 4.44
43 44 1.144093 TGATTTGAACTCCCCAACCGT 59.856 47.619 0.00 0.00 0.00 4.83
44 45 1.539827 GTGATTTGAACTCCCCAACCG 59.460 52.381 0.00 0.00 0.00 4.44
45 46 2.593026 TGTGATTTGAACTCCCCAACC 58.407 47.619 0.00 0.00 0.00 3.77
46 47 4.559153 CAATGTGATTTGAACTCCCCAAC 58.441 43.478 0.00 0.00 0.00 3.77
47 48 3.577848 CCAATGTGATTTGAACTCCCCAA 59.422 43.478 0.00 0.00 0.00 4.12
48 49 3.164268 CCAATGTGATTTGAACTCCCCA 58.836 45.455 0.00 0.00 0.00 4.96
49 50 2.094026 GCCAATGTGATTTGAACTCCCC 60.094 50.000 0.00 0.00 0.00 4.81
50 51 2.827921 AGCCAATGTGATTTGAACTCCC 59.172 45.455 0.00 0.00 0.00 4.30
51 52 3.367703 CCAGCCAATGTGATTTGAACTCC 60.368 47.826 0.00 0.00 0.00 3.85
52 53 3.507233 TCCAGCCAATGTGATTTGAACTC 59.493 43.478 0.00 0.00 0.00 3.01
53 54 3.499338 TCCAGCCAATGTGATTTGAACT 58.501 40.909 0.00 0.00 0.00 3.01
54 55 3.940209 TCCAGCCAATGTGATTTGAAC 57.060 42.857 0.00 0.00 0.00 3.18
55 56 3.306225 GCTTCCAGCCAATGTGATTTGAA 60.306 43.478 0.00 0.00 34.48 2.69
56 57 2.231964 GCTTCCAGCCAATGTGATTTGA 59.768 45.455 0.00 0.00 34.48 2.69
57 58 2.613691 GCTTCCAGCCAATGTGATTTG 58.386 47.619 0.00 0.00 34.48 2.32
58 59 1.203052 CGCTTCCAGCCAATGTGATTT 59.797 47.619 0.00 0.00 38.18 2.17
59 60 0.813184 CGCTTCCAGCCAATGTGATT 59.187 50.000 0.00 0.00 38.18 2.57
60 61 1.660560 GCGCTTCCAGCCAATGTGAT 61.661 55.000 0.00 0.00 38.18 3.06
61 62 2.334946 GCGCTTCCAGCCAATGTGA 61.335 57.895 0.00 0.00 38.18 3.58
62 63 1.026182 TAGCGCTTCCAGCCAATGTG 61.026 55.000 18.68 0.00 38.18 3.21
63 64 0.745845 CTAGCGCTTCCAGCCAATGT 60.746 55.000 18.68 0.00 38.18 2.71
64 65 0.745845 ACTAGCGCTTCCAGCCAATG 60.746 55.000 18.68 0.00 38.18 2.82
65 66 0.745845 CACTAGCGCTTCCAGCCAAT 60.746 55.000 18.68 0.00 38.18 3.16
66 67 1.375908 CACTAGCGCTTCCAGCCAA 60.376 57.895 18.68 0.00 38.18 4.52
67 68 2.265739 CACTAGCGCTTCCAGCCA 59.734 61.111 18.68 0.00 38.18 4.75
68 69 3.198489 GCACTAGCGCTTCCAGCC 61.198 66.667 18.68 0.00 38.18 4.85
78 79 2.736721 TGAAAGATGACAACGCACTAGC 59.263 45.455 0.00 0.00 37.42 3.42
79 80 3.181540 CGTGAAAGATGACAACGCACTAG 60.182 47.826 0.00 0.00 0.00 2.57
80 81 2.729360 CGTGAAAGATGACAACGCACTA 59.271 45.455 0.00 0.00 0.00 2.74
81 82 1.526887 CGTGAAAGATGACAACGCACT 59.473 47.619 0.00 0.00 0.00 4.40
82 83 1.398451 CCGTGAAAGATGACAACGCAC 60.398 52.381 0.00 0.00 0.00 5.34
83 84 0.865111 CCGTGAAAGATGACAACGCA 59.135 50.000 0.00 0.00 0.00 5.24
84 85 0.452784 GCCGTGAAAGATGACAACGC 60.453 55.000 0.00 0.00 0.00 4.84
85 86 1.136252 CAGCCGTGAAAGATGACAACG 60.136 52.381 0.00 0.00 0.00 4.10
86 87 1.400242 GCAGCCGTGAAAGATGACAAC 60.400 52.381 0.00 0.00 0.00 3.32
87 88 0.874390 GCAGCCGTGAAAGATGACAA 59.126 50.000 0.00 0.00 0.00 3.18
88 89 0.250252 TGCAGCCGTGAAAGATGACA 60.250 50.000 0.00 0.00 0.00 3.58
89 90 0.166814 GTGCAGCCGTGAAAGATGAC 59.833 55.000 0.00 0.00 0.00 3.06
90 91 0.035317 AGTGCAGCCGTGAAAGATGA 59.965 50.000 0.00 0.00 0.00 2.92
91 92 0.877071 AAGTGCAGCCGTGAAAGATG 59.123 50.000 0.00 0.00 0.00 2.90
92 93 1.160137 GAAGTGCAGCCGTGAAAGAT 58.840 50.000 0.00 0.00 0.00 2.40
93 94 0.884704 GGAAGTGCAGCCGTGAAAGA 60.885 55.000 0.00 0.00 0.00 2.52
94 95 1.576421 GGAAGTGCAGCCGTGAAAG 59.424 57.895 0.00 0.00 0.00 2.62
95 96 2.250939 CGGAAGTGCAGCCGTGAAA 61.251 57.895 12.93 0.00 42.49 2.69
96 97 2.664851 CGGAAGTGCAGCCGTGAA 60.665 61.111 12.93 0.00 42.49 3.18
108 109 1.810755 GGAGCAAAAGGGTAACGGAAG 59.189 52.381 0.00 0.00 37.60 3.46
109 110 1.422402 AGGAGCAAAAGGGTAACGGAA 59.578 47.619 0.00 0.00 37.60 4.30
110 111 1.061546 AGGAGCAAAAGGGTAACGGA 58.938 50.000 0.00 0.00 37.60 4.69
111 112 1.165270 CAGGAGCAAAAGGGTAACGG 58.835 55.000 0.00 0.00 37.60 4.44
112 113 1.165270 CCAGGAGCAAAAGGGTAACG 58.835 55.000 0.00 0.00 37.60 3.18
113 114 1.545841 CCCAGGAGCAAAAGGGTAAC 58.454 55.000 0.00 0.00 36.52 2.50
114 115 0.251608 GCCCAGGAGCAAAAGGGTAA 60.252 55.000 0.00 0.00 43.42 2.85
115 116 1.382629 GCCCAGGAGCAAAAGGGTA 59.617 57.895 0.00 0.00 43.42 3.69
116 117 2.118294 GCCCAGGAGCAAAAGGGT 59.882 61.111 0.00 0.00 43.42 4.34
117 118 1.980772 CTGCCCAGGAGCAAAAGGG 60.981 63.158 4.39 0.00 43.52 3.95
136 137 4.814294 ACCGCGATTCGACCTGCC 62.814 66.667 8.23 0.00 41.67 4.85
150 151 1.303236 TCCAGTTTGGATGGCACCG 60.303 57.895 0.00 0.00 42.67 4.94
187 188 0.804989 GATCGTGGCAAACTTCCAGG 59.195 55.000 0.00 0.00 39.96 4.45
223 224 4.506255 ACGCCCTGCTATTGGCCC 62.506 66.667 0.00 0.00 45.07 5.80
240 241 5.550290 ACACGGATCAATGTGCATATATCA 58.450 37.500 10.74 0.00 39.71 2.15
251 252 1.018752 TGCGGTGACACGGATCAATG 61.019 55.000 16.60 0.00 0.00 2.82
268 321 0.179062 ATTGGACGGCTCAGATCTGC 60.179 55.000 18.36 7.19 0.00 4.26
270 323 4.696479 ATTAATTGGACGGCTCAGATCT 57.304 40.909 0.00 0.00 0.00 2.75
318 371 6.392354 CCGTAATTTGTGGTGTACTCTAGAA 58.608 40.000 0.00 0.00 0.00 2.10
323 376 3.068560 TGCCGTAATTTGTGGTGTACTC 58.931 45.455 0.00 0.00 0.00 2.59
324 377 3.128852 TGCCGTAATTTGTGGTGTACT 57.871 42.857 0.00 0.00 0.00 2.73
325 378 3.687698 AGATGCCGTAATTTGTGGTGTAC 59.312 43.478 0.00 0.00 0.00 2.90
326 379 3.945346 AGATGCCGTAATTTGTGGTGTA 58.055 40.909 0.00 0.00 0.00 2.90
327 380 2.790433 AGATGCCGTAATTTGTGGTGT 58.210 42.857 0.00 0.00 0.00 4.16
329 382 3.686016 AGAAGATGCCGTAATTTGTGGT 58.314 40.909 0.00 0.00 0.00 4.16
330 383 5.811399 TTAGAAGATGCCGTAATTTGTGG 57.189 39.130 0.00 0.00 0.00 4.17
348 401 4.393062 ACGAACGAACCGACTTAGATTAGA 59.607 41.667 0.14 0.00 0.00 2.10
349 402 4.656041 ACGAACGAACCGACTTAGATTAG 58.344 43.478 0.14 0.00 0.00 1.73
350 403 4.685169 ACGAACGAACCGACTTAGATTA 57.315 40.909 0.14 0.00 0.00 1.75
351 404 3.565905 ACGAACGAACCGACTTAGATT 57.434 42.857 0.14 0.00 0.00 2.40
386 739 4.077387 AGGGTATTCATAGGGAGAAGGGAA 60.077 45.833 0.00 0.00 0.00 3.97
391 773 2.979678 GGCAGGGTATTCATAGGGAGAA 59.020 50.000 0.00 0.00 0.00 2.87
401 783 1.069935 GCGAGAGGGCAGGGTATTC 59.930 63.158 0.00 0.00 0.00 1.75
423 805 0.689623 AACCCTGTTCTGGAGCAGAG 59.310 55.000 14.42 5.40 41.75 3.35
427 813 0.329596 ATGGAACCCTGTTCTGGAGC 59.670 55.000 6.89 0.00 0.00 4.70
475 861 1.403679 CCTCTCTCTCACGGTTGCTAG 59.596 57.143 0.00 0.00 0.00 3.42
486 872 5.241662 AGTTGCAATTGTTACCTCTCTCTC 58.758 41.667 0.59 0.00 0.00 3.20
526 915 0.041238 AGGCCAGACTACAGCTACCA 59.959 55.000 5.01 0.00 0.00 3.25
527 916 1.134670 CAAGGCCAGACTACAGCTACC 60.135 57.143 5.01 0.00 0.00 3.18
582 971 5.992217 AGTATTGAGACCAGAACAAGACAAC 59.008 40.000 0.00 0.00 37.93 3.32
591 980 4.534500 TGGGCTAAAGTATTGAGACCAGAA 59.466 41.667 0.00 0.00 43.76 3.02
612 1013 2.617308 CAAGAATAGAGGTGCTGCATGG 59.383 50.000 5.27 0.00 0.00 3.66
623 1024 9.044150 ACGTTACTAGCTACTACAAGAATAGAG 57.956 37.037 0.00 0.00 0.00 2.43
625 1026 8.068977 CCACGTTACTAGCTACTACAAGAATAG 58.931 40.741 0.00 0.00 0.00 1.73
627 1028 6.376581 ACCACGTTACTAGCTACTACAAGAAT 59.623 38.462 0.00 0.00 0.00 2.40
630 1031 5.448360 GGACCACGTTACTAGCTACTACAAG 60.448 48.000 0.00 0.00 0.00 3.16
632 1033 3.941483 GGACCACGTTACTAGCTACTACA 59.059 47.826 0.00 0.00 0.00 2.74
633 1034 4.195416 AGGACCACGTTACTAGCTACTAC 58.805 47.826 0.00 0.00 0.00 2.73
634 1035 4.494091 AGGACCACGTTACTAGCTACTA 57.506 45.455 0.00 0.00 0.00 1.82
635 1036 3.362870 AGGACCACGTTACTAGCTACT 57.637 47.619 0.00 0.00 0.00 2.57
636 1037 4.446994 AAAGGACCACGTTACTAGCTAC 57.553 45.455 0.00 0.00 0.00 3.58
639 1040 2.159037 GCAAAAGGACCACGTTACTAGC 59.841 50.000 0.00 0.00 0.00 3.42
641 1042 3.181463 ACAGCAAAAGGACCACGTTACTA 60.181 43.478 0.00 0.00 0.00 1.82
643 1044 1.944709 ACAGCAAAAGGACCACGTTAC 59.055 47.619 0.00 0.00 0.00 2.50
645 1046 0.738389 CACAGCAAAAGGACCACGTT 59.262 50.000 0.00 0.00 0.00 3.99
646 1047 0.393808 ACACAGCAAAAGGACCACGT 60.394 50.000 0.00 0.00 0.00 4.49
647 1048 0.738389 AACACAGCAAAAGGACCACG 59.262 50.000 0.00 0.00 0.00 4.94
649 1050 2.435372 AGAACACAGCAAAAGGACCA 57.565 45.000 0.00 0.00 0.00 4.02
650 1051 3.447742 CAAAGAACACAGCAAAAGGACC 58.552 45.455 0.00 0.00 0.00 4.46
651 1052 3.447742 CCAAAGAACACAGCAAAAGGAC 58.552 45.455 0.00 0.00 0.00 3.85
653 1054 2.430332 TCCCAAAGAACACAGCAAAAGG 59.570 45.455 0.00 0.00 0.00 3.11
654 1055 3.799281 TCCCAAAGAACACAGCAAAAG 57.201 42.857 0.00 0.00 0.00 2.27
656 1057 5.279406 CCAATATCCCAAAGAACACAGCAAA 60.279 40.000 0.00 0.00 0.00 3.68
657 1058 4.220382 CCAATATCCCAAAGAACACAGCAA 59.780 41.667 0.00 0.00 0.00 3.91
658 1059 3.763360 CCAATATCCCAAAGAACACAGCA 59.237 43.478 0.00 0.00 0.00 4.41
659 1060 3.763897 ACCAATATCCCAAAGAACACAGC 59.236 43.478 0.00 0.00 0.00 4.40
672 1245 2.158813 ACACACCCATCGACCAATATCC 60.159 50.000 0.00 0.00 0.00 2.59
694 1267 1.303317 GTTGCCCATCGACCCAAGT 60.303 57.895 0.00 0.00 0.00 3.16
701 1274 0.617935 TCTCCATTGTTGCCCATCGA 59.382 50.000 0.00 0.00 0.00 3.59
707 1280 2.893489 ACTTCCTTTCTCCATTGTTGCC 59.107 45.455 0.00 0.00 0.00 4.52
734 1307 8.749354 AGCTTCAAACCTAATTATTTTTCCGAT 58.251 29.630 0.00 0.00 0.00 4.18
736 1309 8.757164 AAGCTTCAAACCTAATTATTTTTCCG 57.243 30.769 0.00 0.00 0.00 4.30
762 1335 9.758651 GCTTCAAACCTAATCCTTTTTCTAAAA 57.241 29.630 0.00 0.00 0.00 1.52
763 1336 9.143155 AGCTTCAAACCTAATCCTTTTTCTAAA 57.857 29.630 0.00 0.00 0.00 1.85
764 1337 8.706322 AGCTTCAAACCTAATCCTTTTTCTAA 57.294 30.769 0.00 0.00 0.00 2.10
765 1338 9.975218 ATAGCTTCAAACCTAATCCTTTTTCTA 57.025 29.630 0.00 0.00 0.00 2.10
766 1339 8.885693 ATAGCTTCAAACCTAATCCTTTTTCT 57.114 30.769 0.00 0.00 0.00 2.52
768 1341 9.755122 AGTATAGCTTCAAACCTAATCCTTTTT 57.245 29.630 0.00 0.00 0.00 1.94
769 1342 9.178758 CAGTATAGCTTCAAACCTAATCCTTTT 57.821 33.333 0.00 0.00 0.00 2.27
770 1343 8.548877 TCAGTATAGCTTCAAACCTAATCCTTT 58.451 33.333 0.00 0.00 0.00 3.11
771 1344 8.090788 TCAGTATAGCTTCAAACCTAATCCTT 57.909 34.615 0.00 0.00 0.00 3.36
772 1345 7.676683 TCAGTATAGCTTCAAACCTAATCCT 57.323 36.000 0.00 0.00 0.00 3.24
773 1346 8.910351 AATCAGTATAGCTTCAAACCTAATCC 57.090 34.615 0.00 0.00 0.00 3.01
775 1348 9.046296 CGAAATCAGTATAGCTTCAAACCTAAT 57.954 33.333 0.00 0.00 0.00 1.73
776 1349 8.038944 ACGAAATCAGTATAGCTTCAAACCTAA 58.961 33.333 0.00 0.00 0.00 2.69
777 1350 7.491372 CACGAAATCAGTATAGCTTCAAACCTA 59.509 37.037 0.00 0.00 0.00 3.08
778 1351 6.313905 CACGAAATCAGTATAGCTTCAAACCT 59.686 38.462 0.00 0.00 0.00 3.50
779 1352 6.312918 TCACGAAATCAGTATAGCTTCAAACC 59.687 38.462 0.00 0.00 0.00 3.27
846 1420 9.376171 CGACTACAGATATATCGCAGATTATTC 57.624 37.037 7.08 0.03 45.12 1.75
849 1423 8.488651 TTCGACTACAGATATATCGCAGATTA 57.511 34.615 7.08 0.00 45.12 1.75
855 1429 6.091034 TGAGACTTCGACTACAGATATATCGC 59.909 42.308 7.08 0.00 32.89 4.58
864 1438 6.019479 GCCAAATATTGAGACTTCGACTACAG 60.019 42.308 0.00 0.00 0.00 2.74
872 1446 5.049405 CCCATACGCCAAATATTGAGACTTC 60.049 44.000 0.00 0.00 0.00 3.01
879 1453 2.295909 CACCCCCATACGCCAAATATTG 59.704 50.000 0.00 0.00 0.00 1.90
883 1457 0.106719 CTCACCCCCATACGCCAAAT 60.107 55.000 0.00 0.00 0.00 2.32
890 1464 1.414919 TGTAATCGCTCACCCCCATAC 59.585 52.381 0.00 0.00 0.00 2.39
893 1467 0.907704 AGTGTAATCGCTCACCCCCA 60.908 55.000 0.00 0.00 35.45 4.96
897 1471 3.262420 ACATCAAGTGTAATCGCTCACC 58.738 45.455 0.00 0.00 39.91 4.02
905 1479 5.769662 TGCTTTGGAGAACATCAAGTGTAAT 59.230 36.000 0.00 0.00 41.14 1.89
919 1493 6.360370 ACTTAGTGACTTATGCTTTGGAGA 57.640 37.500 0.00 0.00 0.00 3.71
922 1496 7.819900 AGACTAACTTAGTGACTTATGCTTTGG 59.180 37.037 6.17 0.00 39.59 3.28
923 1497 8.764524 AGACTAACTTAGTGACTTATGCTTTG 57.235 34.615 6.17 0.00 39.59 2.77
924 1498 9.209175 CAAGACTAACTTAGTGACTTATGCTTT 57.791 33.333 6.17 0.00 39.59 3.51
945 1519 8.528917 AAAGTAACCTTTTCAACAAACAAGAC 57.471 30.769 0.00 0.00 37.65 3.01
978 1558 8.579863 GCCATCCTGCAAATAAGATAGTAAATT 58.420 33.333 0.00 0.00 0.00 1.82
983 1563 5.312079 GAGCCATCCTGCAAATAAGATAGT 58.688 41.667 0.00 0.00 0.00 2.12
988 1568 2.564771 TCGAGCCATCCTGCAAATAAG 58.435 47.619 0.00 0.00 0.00 1.73
991 1571 1.098050 GTTCGAGCCATCCTGCAAAT 58.902 50.000 0.00 0.00 0.00 2.32
1013 1593 1.542915 TGGAGTTACGAGCTGTACACC 59.457 52.381 0.00 0.00 31.20 4.16
1045 1625 3.451890 CCCTAAGGTTCTTGGTAGGAGT 58.548 50.000 0.00 0.00 36.03 3.85
1107 1966 4.997395 GTGGTTCGGATCATATAGCAACAT 59.003 41.667 0.00 0.00 0.00 2.71
1108 1967 4.100963 AGTGGTTCGGATCATATAGCAACA 59.899 41.667 0.00 0.00 0.00 3.33
1110 1969 4.955811 AGTGGTTCGGATCATATAGCAA 57.044 40.909 0.00 0.00 0.00 3.91
1112 1971 5.967088 ACATAGTGGTTCGGATCATATAGC 58.033 41.667 0.00 0.00 0.00 2.97
1124 1983 8.773404 AACAACTCTAACATACATAGTGGTTC 57.227 34.615 0.00 0.00 30.27 3.62
1185 2044 2.237751 CGGCCTATCGTCGCAAAGG 61.238 63.158 0.00 3.72 0.00 3.11
1186 2045 3.309675 CGGCCTATCGTCGCAAAG 58.690 61.111 0.00 0.00 0.00 2.77
1226 2085 1.371558 GCGGTTGACTCCTCCAGTT 59.628 57.895 0.00 0.00 34.41 3.16
1227 2086 1.407656 TTGCGGTTGACTCCTCCAGT 61.408 55.000 0.00 0.00 38.45 4.00
1228 2087 0.250295 TTTGCGGTTGACTCCTCCAG 60.250 55.000 0.00 0.00 0.00 3.86
1229 2088 0.181587 TTTTGCGGTTGACTCCTCCA 59.818 50.000 0.00 0.00 0.00 3.86
1230 2089 1.314730 TTTTTGCGGTTGACTCCTCC 58.685 50.000 0.00 0.00 0.00 4.30
1231 2090 4.759516 TTATTTTTGCGGTTGACTCCTC 57.240 40.909 0.00 0.00 0.00 3.71
1232 2091 5.523438 TTTTATTTTTGCGGTTGACTCCT 57.477 34.783 0.00 0.00 0.00 3.69
1233 2092 5.980715 TCTTTTTATTTTTGCGGTTGACTCC 59.019 36.000 0.00 0.00 0.00 3.85
1234 2093 7.458038 TTCTTTTTATTTTTGCGGTTGACTC 57.542 32.000 0.00 0.00 0.00 3.36
1235 2094 7.835634 TTTCTTTTTATTTTTGCGGTTGACT 57.164 28.000 0.00 0.00 0.00 3.41
1236 2095 8.882278 TTTTTCTTTTTATTTTTGCGGTTGAC 57.118 26.923 0.00 0.00 0.00 3.18
1260 2119 5.117406 ACTTCTTGACTCCTCCAGTTTTT 57.883 39.130 0.00 0.00 34.41 1.94
1261 2120 4.445019 GGACTTCTTGACTCCTCCAGTTTT 60.445 45.833 0.00 0.00 34.41 2.43
1262 2121 3.071747 GGACTTCTTGACTCCTCCAGTTT 59.928 47.826 0.00 0.00 34.41 2.66
1282 2141 2.203640 AGGGCGATATCTGCGGGA 60.204 61.111 11.57 0.00 0.00 5.14
1386 2245 3.795561 CAAGAGCACTTGTACGAAAGG 57.204 47.619 14.94 0.00 45.73 3.11
1410 2269 4.260375 CCCTTCTGATACTTGCGAATTTCG 60.260 45.833 14.33 14.33 43.89 3.46
1436 2295 1.328986 GCTTCCTTATGAGCAACTCGC 59.671 52.381 0.00 0.00 42.91 5.03
1485 2344 4.545823 TTGTACCTTGAAAACTTGAGCG 57.454 40.909 0.00 0.00 0.00 5.03
1509 2368 8.217131 TCAATGTATCTCAAGTGATCCAAATG 57.783 34.615 0.00 0.00 0.00 2.32
1510 2369 8.812513 TTCAATGTATCTCAAGTGATCCAAAT 57.187 30.769 0.00 0.00 0.00 2.32
1533 2412 2.954989 GGAAGGGATTGAGCTGGATTTC 59.045 50.000 0.00 0.00 0.00 2.17
1636 2531 1.281867 TCTGTAGATGTGGCCAAAGGG 59.718 52.381 7.24 0.00 37.18 3.95
1706 2610 1.985159 AGTCCCACAAGGTATGCTTCA 59.015 47.619 0.00 0.00 36.75 3.02
1765 2669 6.640518 ACATCTTTGGACATAATAGTCACGT 58.359 36.000 0.00 0.00 40.29 4.49
1772 2676 7.229306 GCCAGATGAACATCTTTGGACATAATA 59.771 37.037 20.02 0.00 45.31 0.98
1837 2741 3.669536 TGCATGTTTGTTGATCCGTCTA 58.330 40.909 0.00 0.00 0.00 2.59
1908 2821 5.004448 TGTAACTTCCGTGGCATATCAAAA 58.996 37.500 0.00 0.00 0.00 2.44
1961 2874 7.481642 ACAATGCATACGCTACTATATACTCC 58.518 38.462 0.00 0.00 39.64 3.85
1964 2877 9.653067 CTAGACAATGCATACGCTACTATATAC 57.347 37.037 0.00 0.00 39.64 1.47
1989 2903 5.815222 GTCAAATTTGTAAGGTTTTGGCACT 59.185 36.000 17.47 0.00 34.63 4.40
2004 2918 1.778591 GCGGAACACACGTCAAATTTG 59.221 47.619 12.15 12.15 0.00 2.32
2059 2973 9.104965 GTGTATATGTGTTGCTGTAGGAATAAA 57.895 33.333 0.00 0.00 0.00 1.40
2071 2992 8.970691 AAAGAAAATCTGTGTATATGTGTTGC 57.029 30.769 0.00 0.00 0.00 4.17
2172 3093 3.317149 CAGAATGGTCCAAGTATGCATGG 59.683 47.826 10.16 3.11 38.09 3.66
2198 3119 4.614993 CGAACCAAACAAACTGACACTTGT 60.615 41.667 0.00 0.00 37.36 3.16
2229 3150 4.793071 CGCAAGTGTTGATGGAACAATAA 58.207 39.130 0.00 0.00 46.30 1.40
2230 3151 3.365868 GCGCAAGTGTTGATGGAACAATA 60.366 43.478 0.30 0.00 46.30 1.90
2231 3152 2.607771 GCGCAAGTGTTGATGGAACAAT 60.608 45.455 0.30 0.00 46.30 2.71
2268 3189 4.577283 TGACTTTATTTATAACAGCGGGGC 59.423 41.667 0.00 0.00 0.00 5.80
2304 3225 2.223947 GCTTCCATTTTCGGTTGTGGTT 60.224 45.455 0.00 0.00 33.47 3.67
2351 3283 1.379044 GCCACTAGCATGCACCCTT 60.379 57.895 21.98 0.16 42.97 3.95
2408 3340 8.697292 GTCTACTAATTATCACTTGTCCTCCTT 58.303 37.037 0.00 0.00 0.00 3.36
2412 3344 6.505272 GCGTCTACTAATTATCACTTGTCCT 58.495 40.000 0.00 0.00 0.00 3.85
2439 3371 7.852263 AGTTGACTAGTAATTACAAGATGGCT 58.148 34.615 17.65 5.58 0.00 4.75
2454 3389 1.132643 GCCATCGACGAGTTGACTAGT 59.867 52.381 3.01 0.00 34.50 2.57
2455 3390 1.534175 GGCCATCGACGAGTTGACTAG 60.534 57.143 3.01 0.00 0.00 2.57
2457 3392 1.215647 GGCCATCGACGAGTTGACT 59.784 57.895 3.01 0.00 0.00 3.41
2475 3410 2.225068 ACAAGCGATTGGATAGGACG 57.775 50.000 18.84 0.00 0.00 4.79
2487 3422 1.302511 GAAGCCCCTCAACAAGCGA 60.303 57.895 0.00 0.00 0.00 4.93
2493 3428 1.377856 GCTCTGGAAGCCCCTCAAC 60.378 63.158 0.00 0.00 45.92 3.18
2508 3443 3.376234 TCATGACTTTTATGCTGCAGCTC 59.624 43.478 36.61 24.40 42.66 4.09
2524 3459 3.011566 TCTCCTCAGAGTCCTCATGAC 57.988 52.381 0.00 0.00 44.82 3.06
2525 3460 3.564264 CATCTCCTCAGAGTCCTCATGA 58.436 50.000 0.00 0.00 41.26 3.07
2526 3461 2.036217 GCATCTCCTCAGAGTCCTCATG 59.964 54.545 0.00 0.00 41.26 3.07
2527 3462 2.318908 GCATCTCCTCAGAGTCCTCAT 58.681 52.381 0.00 0.00 41.26 2.90
2528 3463 1.006400 TGCATCTCCTCAGAGTCCTCA 59.994 52.381 0.00 0.00 41.26 3.86
2529 3464 1.682854 CTGCATCTCCTCAGAGTCCTC 59.317 57.143 0.00 0.00 41.26 3.71
2530 3465 1.688942 CCTGCATCTCCTCAGAGTCCT 60.689 57.143 0.00 0.00 41.26 3.85
2531 3466 0.752054 CCTGCATCTCCTCAGAGTCC 59.248 60.000 0.00 0.00 41.26 3.85
2532 3467 1.774110 TCCTGCATCTCCTCAGAGTC 58.226 55.000 0.00 0.00 41.26 3.36
2533 3468 2.475339 ATCCTGCATCTCCTCAGAGT 57.525 50.000 0.00 0.00 41.26 3.24
2534 3469 4.502950 GGTTTATCCTGCATCTCCTCAGAG 60.503 50.000 0.00 0.00 41.93 3.35
2535 3470 3.389329 GGTTTATCCTGCATCTCCTCAGA 59.611 47.826 0.00 0.00 32.26 3.27
2536 3471 3.135348 TGGTTTATCCTGCATCTCCTCAG 59.865 47.826 0.00 0.00 37.07 3.35
2537 3472 3.114606 TGGTTTATCCTGCATCTCCTCA 58.885 45.455 0.00 0.00 37.07 3.86
2538 3473 3.845781 TGGTTTATCCTGCATCTCCTC 57.154 47.619 0.00 0.00 37.07 3.71
2539 3474 4.591321 TTTGGTTTATCCTGCATCTCCT 57.409 40.909 0.00 0.00 37.07 3.69
2540 3475 4.462483 TGTTTTGGTTTATCCTGCATCTCC 59.538 41.667 0.00 0.00 37.07 3.71
2541 3476 5.643379 TGTTTTGGTTTATCCTGCATCTC 57.357 39.130 0.00 0.00 37.07 2.75
2542 3477 6.351286 GGATTGTTTTGGTTTATCCTGCATCT 60.351 38.462 0.00 0.00 37.07 2.90
2543 3478 5.812127 GGATTGTTTTGGTTTATCCTGCATC 59.188 40.000 0.00 0.00 37.07 3.91
2544 3479 5.484998 AGGATTGTTTTGGTTTATCCTGCAT 59.515 36.000 0.00 0.00 42.58 3.96
2545 3480 4.837860 AGGATTGTTTTGGTTTATCCTGCA 59.162 37.500 0.00 0.00 42.58 4.41
2546 3481 5.405935 AGGATTGTTTTGGTTTATCCTGC 57.594 39.130 0.00 0.00 42.58 4.85
2548 3483 5.650283 TCCAGGATTGTTTTGGTTTATCCT 58.350 37.500 0.00 0.00 44.48 3.24
2549 3484 5.993748 TCCAGGATTGTTTTGGTTTATCC 57.006 39.130 0.00 0.00 35.97 2.59
2550 3485 7.227049 TCTTCCAGGATTGTTTTGGTTTATC 57.773 36.000 0.00 0.00 33.65 1.75
2551 3486 7.232118 CTCTTCCAGGATTGTTTTGGTTTAT 57.768 36.000 0.00 0.00 33.65 1.40
2552 3487 6.648879 CTCTTCCAGGATTGTTTTGGTTTA 57.351 37.500 0.00 0.00 33.65 2.01
2553 3488 5.535753 CTCTTCCAGGATTGTTTTGGTTT 57.464 39.130 0.00 0.00 33.65 3.27
2566 3501 4.157849 GGATAAACCTTCCTCTTCCAGG 57.842 50.000 0.00 0.00 38.56 4.45
2576 3511 9.146599 TGGACTGCCGATATAGGATAAACCTTC 62.147 44.444 5.98 0.00 42.98 3.46
2577 3512 7.432013 TGGACTGCCGATATAGGATAAACCTT 61.432 42.308 5.98 0.00 42.98 3.50
2578 3513 5.989867 TGGACTGCCGATATAGGATAAACCT 60.990 44.000 5.98 0.00 44.48 3.50
2579 3514 4.222145 TGGACTGCCGATATAGGATAAACC 59.778 45.833 5.98 2.95 36.79 3.27
2580 3515 5.401531 TGGACTGCCGATATAGGATAAAC 57.598 43.478 5.98 0.00 36.79 2.01
2581 3516 7.123383 TCTATGGACTGCCGATATAGGATAAA 58.877 38.462 5.98 0.00 36.79 1.40
2582 3517 6.669631 TCTATGGACTGCCGATATAGGATAA 58.330 40.000 5.98 0.00 36.79 1.75
2583 3518 6.262056 TCTATGGACTGCCGATATAGGATA 57.738 41.667 5.98 0.00 36.79 2.59
2584 3519 5.130705 TCTATGGACTGCCGATATAGGAT 57.869 43.478 5.98 0.00 36.79 3.24
2585 3520 4.586306 TCTATGGACTGCCGATATAGGA 57.414 45.455 5.98 0.00 36.79 2.94
2586 3521 4.707448 ACTTCTATGGACTGCCGATATAGG 59.293 45.833 0.00 0.00 36.79 2.57
2587 3522 5.184096 ACACTTCTATGGACTGCCGATATAG 59.816 44.000 0.00 0.00 36.79 1.31
2588 3523 5.048013 CACACTTCTATGGACTGCCGATATA 60.048 44.000 0.00 0.00 36.79 0.86
2589 3524 3.898123 ACACTTCTATGGACTGCCGATAT 59.102 43.478 0.00 0.00 36.79 1.63
2590 3525 3.068165 CACACTTCTATGGACTGCCGATA 59.932 47.826 0.00 0.00 36.79 2.92
2591 3526 2.111384 ACACTTCTATGGACTGCCGAT 58.889 47.619 0.00 0.00 36.79 4.18
2592 3527 1.204704 CACACTTCTATGGACTGCCGA 59.795 52.381 0.00 0.00 36.79 5.54
2593 3528 1.204704 TCACACTTCTATGGACTGCCG 59.795 52.381 0.00 0.00 36.79 5.69
2594 3529 2.497675 TCTCACACTTCTATGGACTGCC 59.502 50.000 0.00 0.00 0.00 4.85
2595 3530 3.194542 ACTCTCACACTTCTATGGACTGC 59.805 47.826 0.00 0.00 0.00 4.40
2596 3531 5.398603 AACTCTCACACTTCTATGGACTG 57.601 43.478 0.00 0.00 0.00 3.51
2597 3532 5.654650 CCTAACTCTCACACTTCTATGGACT 59.345 44.000 0.00 0.00 0.00 3.85
2598 3533 5.680151 GCCTAACTCTCACACTTCTATGGAC 60.680 48.000 0.00 0.00 0.00 4.02
2599 3534 4.402793 GCCTAACTCTCACACTTCTATGGA 59.597 45.833 0.00 0.00 0.00 3.41
2600 3535 4.688021 GCCTAACTCTCACACTTCTATGG 58.312 47.826 0.00 0.00 0.00 2.74
2601 3536 4.096532 TCGCCTAACTCTCACACTTCTATG 59.903 45.833 0.00 0.00 0.00 2.23
2602 3537 4.270834 TCGCCTAACTCTCACACTTCTAT 58.729 43.478 0.00 0.00 0.00 1.98
2603 3538 3.682696 TCGCCTAACTCTCACACTTCTA 58.317 45.455 0.00 0.00 0.00 2.10
2604 3539 2.515854 TCGCCTAACTCTCACACTTCT 58.484 47.619 0.00 0.00 0.00 2.85
2605 3540 3.299340 TTCGCCTAACTCTCACACTTC 57.701 47.619 0.00 0.00 0.00 3.01
2606 3541 3.321111 TCTTTCGCCTAACTCTCACACTT 59.679 43.478 0.00 0.00 0.00 3.16
2607 3542 2.891580 TCTTTCGCCTAACTCTCACACT 59.108 45.455 0.00 0.00 0.00 3.55
2608 3543 3.299340 TCTTTCGCCTAACTCTCACAC 57.701 47.619 0.00 0.00 0.00 3.82
2609 3544 4.330944 TTTCTTTCGCCTAACTCTCACA 57.669 40.909 0.00 0.00 0.00 3.58
2610 3545 5.668558 TTTTTCTTTCGCCTAACTCTCAC 57.331 39.130 0.00 0.00 0.00 3.51
2633 3568 9.825109 TGCATGAATGTATTTTTCATCATGAAT 57.175 25.926 15.51 0.00 40.84 2.57
2634 3569 9.654663 TTGCATGAATGTATTTTTCATCATGAA 57.345 25.926 15.51 0.00 40.84 2.57
2635 3570 9.089601 GTTGCATGAATGTATTTTTCATCATGA 57.910 29.630 15.51 0.00 40.84 3.07
2636 3571 8.053653 CGTTGCATGAATGTATTTTTCATCATG 58.946 33.333 0.00 8.73 40.84 3.07
2637 3572 7.760794 ACGTTGCATGAATGTATTTTTCATCAT 59.239 29.630 0.00 0.00 40.84 2.45
2638 3573 7.089538 ACGTTGCATGAATGTATTTTTCATCA 58.910 30.769 0.00 0.00 40.84 3.07
2639 3574 7.510428 ACGTTGCATGAATGTATTTTTCATC 57.490 32.000 0.00 0.00 40.84 2.92
2640 3575 7.887996 AACGTTGCATGAATGTATTTTTCAT 57.112 28.000 0.00 0.00 42.95 2.57
2641 3576 7.327275 GGTAACGTTGCATGAATGTATTTTTCA 59.673 33.333 18.24 0.00 37.49 2.69
2642 3577 7.201401 GGGTAACGTTGCATGAATGTATTTTTC 60.201 37.037 18.24 0.00 32.21 2.29
2643 3578 6.588373 GGGTAACGTTGCATGAATGTATTTTT 59.412 34.615 18.24 0.00 32.21 1.94
2644 3579 6.096695 GGGTAACGTTGCATGAATGTATTTT 58.903 36.000 18.24 0.00 32.21 1.82
2645 3580 5.184096 TGGGTAACGTTGCATGAATGTATTT 59.816 36.000 18.24 0.00 32.21 1.40
2646 3581 4.702612 TGGGTAACGTTGCATGAATGTATT 59.297 37.500 18.24 0.00 32.21 1.89
2647 3582 4.265893 TGGGTAACGTTGCATGAATGTAT 58.734 39.130 18.24 0.00 32.21 2.29
2648 3583 3.676093 TGGGTAACGTTGCATGAATGTA 58.324 40.909 18.24 0.00 32.21 2.29
2649 3584 2.509569 TGGGTAACGTTGCATGAATGT 58.490 42.857 18.24 0.00 35.11 2.71
2650 3585 3.128415 TGATGGGTAACGTTGCATGAATG 59.872 43.478 18.24 0.00 37.60 2.67
2651 3586 3.351740 TGATGGGTAACGTTGCATGAAT 58.648 40.909 18.24 5.52 37.60 2.57
2652 3587 2.746904 CTGATGGGTAACGTTGCATGAA 59.253 45.455 18.24 0.73 37.60 2.57
2653 3588 2.027653 TCTGATGGGTAACGTTGCATGA 60.028 45.455 18.24 1.41 37.60 3.07
2654 3589 2.352651 CTCTGATGGGTAACGTTGCATG 59.647 50.000 18.24 0.00 37.60 4.06
2655 3590 2.027192 ACTCTGATGGGTAACGTTGCAT 60.027 45.455 18.24 3.83 37.60 3.96
2656 3591 1.346395 ACTCTGATGGGTAACGTTGCA 59.654 47.619 18.24 0.00 37.60 4.08
2657 3592 1.732259 CACTCTGATGGGTAACGTTGC 59.268 52.381 11.99 9.89 37.60 4.17
2658 3593 3.040147 ACACTCTGATGGGTAACGTTG 57.960 47.619 11.99 0.00 37.60 4.10
2659 3594 3.070446 TGAACACTCTGATGGGTAACGTT 59.930 43.478 5.88 5.88 37.60 3.99
2660 3595 2.631062 TGAACACTCTGATGGGTAACGT 59.369 45.455 0.00 0.00 37.60 3.99
2661 3596 3.313012 TGAACACTCTGATGGGTAACG 57.687 47.619 0.00 0.00 37.60 3.18
2662 3597 7.985184 TGTAATATGAACACTCTGATGGGTAAC 59.015 37.037 0.00 0.00 0.00 2.50
2663 3598 8.084985 TGTAATATGAACACTCTGATGGGTAA 57.915 34.615 0.00 0.00 0.00 2.85
2664 3599 7.669089 TGTAATATGAACACTCTGATGGGTA 57.331 36.000 0.00 0.00 0.00 3.69
2665 3600 6.560003 TGTAATATGAACACTCTGATGGGT 57.440 37.500 0.00 0.00 0.00 4.51
2666 3601 9.730705 ATATTGTAATATGAACACTCTGATGGG 57.269 33.333 0.00 0.00 30.67 4.00
2706 3641 9.887629 TTTTGCAATGTCATGTTCCATAAATAT 57.112 25.926 0.00 0.00 0.00 1.28
2707 3642 9.368674 CTTTTGCAATGTCATGTTCCATAAATA 57.631 29.630 0.00 0.00 0.00 1.40
2708 3643 7.148373 GCTTTTGCAATGTCATGTTCCATAAAT 60.148 33.333 0.00 0.00 46.58 1.40
2709 3644 6.147492 GCTTTTGCAATGTCATGTTCCATAAA 59.853 34.615 0.00 0.00 46.58 1.40
2710 3645 5.638657 GCTTTTGCAATGTCATGTTCCATAA 59.361 36.000 0.00 0.00 46.58 1.90
2711 3646 5.170021 GCTTTTGCAATGTCATGTTCCATA 58.830 37.500 0.00 0.00 46.58 2.74
2712 3647 3.998341 GCTTTTGCAATGTCATGTTCCAT 59.002 39.130 0.00 0.00 46.58 3.41
2713 3648 3.391965 GCTTTTGCAATGTCATGTTCCA 58.608 40.909 0.00 0.00 46.58 3.53
2727 3662 7.854916 CACTAGCTTCATATTTCTAGCTTTTGC 59.145 37.037 0.00 0.00 40.91 3.68
2728 3663 7.854916 GCACTAGCTTCATATTTCTAGCTTTTG 59.145 37.037 0.00 0.00 40.91 2.44
2729 3664 7.924940 GCACTAGCTTCATATTTCTAGCTTTT 58.075 34.615 0.00 0.00 40.91 2.27
2730 3665 7.489574 GCACTAGCTTCATATTTCTAGCTTT 57.510 36.000 0.00 0.00 40.91 3.51
2747 3682 5.460646 TGTTCAAATAAGCAAAGCACTAGC 58.539 37.500 0.00 0.00 42.56 3.42
2748 3683 8.430063 CAATTGTTCAAATAAGCAAAGCACTAG 58.570 33.333 0.00 0.00 0.00 2.57
2749 3684 7.925483 ACAATTGTTCAAATAAGCAAAGCACTA 59.075 29.630 4.92 0.00 0.00 2.74
2750 3685 6.762661 ACAATTGTTCAAATAAGCAAAGCACT 59.237 30.769 4.92 0.00 0.00 4.40
2751 3686 6.947258 ACAATTGTTCAAATAAGCAAAGCAC 58.053 32.000 4.92 0.00 0.00 4.40
2752 3687 6.074409 CGACAATTGTTCAAATAAGCAAAGCA 60.074 34.615 13.36 0.00 0.00 3.91
2753 3688 6.291385 CGACAATTGTTCAAATAAGCAAAGC 58.709 36.000 13.36 0.00 0.00 3.51
2754 3689 6.128849 CCCGACAATTGTTCAAATAAGCAAAG 60.129 38.462 13.36 0.00 0.00 2.77
2755 3690 5.694006 CCCGACAATTGTTCAAATAAGCAAA 59.306 36.000 13.36 0.00 0.00 3.68
2756 3691 5.010112 TCCCGACAATTGTTCAAATAAGCAA 59.990 36.000 13.36 0.00 0.00 3.91
2757 3692 4.520874 TCCCGACAATTGTTCAAATAAGCA 59.479 37.500 13.36 0.00 0.00 3.91
2758 3693 4.857037 GTCCCGACAATTGTTCAAATAAGC 59.143 41.667 13.36 0.00 0.00 3.09
2759 3694 6.072728 TGAGTCCCGACAATTGTTCAAATAAG 60.073 38.462 13.36 0.00 0.00 1.73
2760 3695 5.765677 TGAGTCCCGACAATTGTTCAAATAA 59.234 36.000 13.36 0.00 0.00 1.40
2761 3696 5.309638 TGAGTCCCGACAATTGTTCAAATA 58.690 37.500 13.36 0.00 0.00 1.40
2762 3697 4.141287 TGAGTCCCGACAATTGTTCAAAT 58.859 39.130 13.36 0.00 0.00 2.32
2763 3698 3.546724 TGAGTCCCGACAATTGTTCAAA 58.453 40.909 13.36 0.00 0.00 2.69
2764 3699 3.201353 TGAGTCCCGACAATTGTTCAA 57.799 42.857 13.36 0.00 0.00 2.69
2765 3700 2.920724 TGAGTCCCGACAATTGTTCA 57.079 45.000 13.36 8.37 0.00 3.18
2766 3701 4.561735 TTTTGAGTCCCGACAATTGTTC 57.438 40.909 13.36 5.66 0.00 3.18
2767 3702 5.529581 AATTTTGAGTCCCGACAATTGTT 57.470 34.783 13.36 0.00 0.00 2.83
2768 3703 6.642707 TTAATTTTGAGTCCCGACAATTGT 57.357 33.333 11.78 11.78 0.00 2.71
2769 3704 8.532977 AAATTAATTTTGAGTCCCGACAATTG 57.467 30.769 7.64 3.24 0.00 2.32
2772 3707 9.465985 GTTAAAATTAATTTTGAGTCCCGACAA 57.534 29.630 28.45 12.94 40.00 3.18
2773 3708 8.630917 TGTTAAAATTAATTTTGAGTCCCGACA 58.369 29.630 28.45 17.86 40.00 4.35
2774 3709 9.465985 TTGTTAAAATTAATTTTGAGTCCCGAC 57.534 29.630 28.45 16.25 40.00 4.79
2790 3725 8.878769 ACAGAACAATTCGCTTTTGTTAAAATT 58.121 25.926 9.25 0.00 44.90 1.82
2791 3726 8.419076 ACAGAACAATTCGCTTTTGTTAAAAT 57.581 26.923 9.25 0.00 44.90 1.82
2792 3727 7.820044 ACAGAACAATTCGCTTTTGTTAAAA 57.180 28.000 9.25 0.00 44.90 1.52
2793 3728 7.820044 AACAGAACAATTCGCTTTTGTTAAA 57.180 28.000 9.25 0.00 44.90 1.52
2794 3729 7.820044 AAACAGAACAATTCGCTTTTGTTAA 57.180 28.000 9.25 0.00 44.90 2.01
2795 3730 7.201478 CCAAAACAGAACAATTCGCTTTTGTTA 60.201 33.333 16.82 0.00 44.90 2.41
2796 3731 6.402011 CCAAAACAGAACAATTCGCTTTTGTT 60.402 34.615 16.82 9.09 46.89 2.83
2797 3732 5.063312 CCAAAACAGAACAATTCGCTTTTGT 59.937 36.000 16.82 0.58 38.91 2.83
2798 3733 5.491973 CCAAAACAGAACAATTCGCTTTTG 58.508 37.500 13.97 13.97 34.02 2.44
2799 3734 4.570369 CCCAAAACAGAACAATTCGCTTTT 59.430 37.500 0.00 0.00 34.02 2.27
2800 3735 4.119136 CCCAAAACAGAACAATTCGCTTT 58.881 39.130 0.00 0.00 34.02 3.51
2801 3736 3.383185 TCCCAAAACAGAACAATTCGCTT 59.617 39.130 0.00 0.00 34.02 4.68
2802 3737 2.955660 TCCCAAAACAGAACAATTCGCT 59.044 40.909 0.00 0.00 34.02 4.93
2803 3738 3.004315 TCTCCCAAAACAGAACAATTCGC 59.996 43.478 0.00 0.00 34.02 4.70
2804 3739 4.787598 CTCTCCCAAAACAGAACAATTCG 58.212 43.478 0.00 0.00 34.02 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.