Multiple sequence alignment - TraesCS3B01G118800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G118800 chr3B 100.000 2907 0 0 1 2907 88203703 88200797 0.000000e+00 5369.0
1 TraesCS3B01G118800 chr3B 94.556 1249 51 6 1106 2351 87718572 87717338 0.000000e+00 1914.0
2 TraesCS3B01G118800 chr3B 89.744 663 63 2 1102 1759 85340492 85339830 0.000000e+00 843.0
3 TraesCS3B01G118800 chr3B 84.204 804 92 24 1113 1889 85237832 85237037 0.000000e+00 749.0
4 TraesCS3B01G118800 chr3B 78.324 692 100 39 411 1078 87719207 87718542 4.510000e-108 401.0
5 TraesCS3B01G118800 chr3B 91.855 221 16 2 2688 2907 88087948 88087729 1.010000e-79 307.0
6 TraesCS3B01G118800 chr3B 86.090 266 34 3 2353 2616 637605043 637604779 1.710000e-72 283.0
7 TraesCS3B01G118800 chr3B 93.370 181 8 3 139 317 810265569 810265391 6.180000e-67 265.0
8 TraesCS3B01G118800 chr3B 87.895 190 20 3 2351 2540 637539735 637539921 1.360000e-53 220.0
9 TraesCS3B01G118800 chr3B 97.101 69 1 1 2262 2329 87717493 87717425 6.580000e-22 115.0
10 TraesCS3B01G118800 chr3B 92.308 78 6 0 2830 2907 391323467 391323544 8.520000e-21 111.0
11 TraesCS3B01G118800 chr3B 95.588 68 3 0 2193 2260 87717424 87717357 3.060000e-20 110.0
12 TraesCS3B01G118800 chr3B 76.712 146 27 4 702 841 85239934 85239790 1.120000e-09 75.0
13 TraesCS3B01G118800 chr3D 88.287 1144 97 18 1101 2231 56350355 56349236 0.000000e+00 1336.0
14 TraesCS3B01G118800 chr3D 85.542 1079 89 28 1192 2239 56312571 56311529 0.000000e+00 1066.0
15 TraesCS3B01G118800 chr3D 90.363 716 50 10 1116 1814 56282328 56281615 0.000000e+00 922.0
16 TraesCS3B01G118800 chr3D 85.848 643 86 3 1156 1795 55349949 55349309 0.000000e+00 678.0
17 TraesCS3B01G118800 chr3D 81.892 740 70 25 310 1008 56414949 56414233 1.510000e-157 566.0
18 TraesCS3B01G118800 chr3D 88.761 347 22 8 1485 1814 56294721 56294375 2.700000e-110 409.0
19 TraesCS3B01G118800 chr3D 82.339 419 51 16 310 719 56298196 56297792 2.770000e-90 342.0
20 TraesCS3B01G118800 chr3D 83.754 357 34 16 310 659 56357669 56357330 1.680000e-82 316.0
21 TraesCS3B01G118800 chr3D 90.361 166 13 3 852 1017 56282500 56282338 6.310000e-52 215.0
22 TraesCS3B01G118800 chr3D 90.361 166 13 3 852 1017 56296455 56296293 6.310000e-52 215.0
23 TraesCS3B01G118800 chr3D 90.506 158 12 3 848 1005 56350537 56350383 3.800000e-49 206.0
24 TraesCS3B01G118800 chr3D 91.667 144 10 1 1 144 56357808 56357667 6.350000e-47 198.0
25 TraesCS3B01G118800 chr3D 82.759 232 13 11 852 1059 56446842 56446614 6.400000e-42 182.0
26 TraesCS3B01G118800 chr3D 88.889 144 14 1 1 144 56284393 56284252 2.980000e-40 176.0
27 TraesCS3B01G118800 chr3D 88.889 144 14 1 1 144 56298335 56298194 2.980000e-40 176.0
28 TraesCS3B01G118800 chr3D 85.542 166 21 3 2353 2517 554762190 554762027 1.390000e-38 171.0
29 TraesCS3B01G118800 chr3D 92.000 100 5 2 1 99 56415076 56414979 1.400000e-28 137.0
30 TraesCS3B01G118800 chr3D 73.846 390 61 29 702 1065 55350359 55349985 1.830000e-22 117.0
31 TraesCS3B01G118800 chr3D 76.216 185 30 11 701 873 55943551 55943733 5.160000e-13 86.1
32 TraesCS3B01G118800 chr3A 92.081 644 49 2 1114 1757 65829494 65828853 0.000000e+00 905.0
33 TraesCS3B01G118800 chr3A 85.652 690 84 12 1111 1795 65700802 65700123 0.000000e+00 712.0
34 TraesCS3B01G118800 chr3A 85.735 687 83 12 1111 1792 65765657 65766333 0.000000e+00 712.0
35 TraesCS3B01G118800 chr3A 89.655 203 17 4 108 310 12672984 12673182 3.720000e-64 255.0
36 TraesCS3B01G118800 chr3A 89.655 203 17 4 108 310 12675168 12675366 3.720000e-64 255.0
37 TraesCS3B01G118800 chr3A 86.713 143 16 2 2 144 65830282 65830143 3.880000e-34 156.0
38 TraesCS3B01G118800 chr6A 87.072 263 33 1 2353 2615 37455698 37455437 2.190000e-76 296.0
39 TraesCS3B01G118800 chr6A 94.886 176 9 0 128 303 531396165 531395990 2.850000e-70 276.0
40 TraesCS3B01G118800 chr6A 90.164 183 16 2 2353 2534 37454560 37454741 1.350000e-58 237.0
41 TraesCS3B01G118800 chr6A 85.106 188 25 3 2349 2534 252851851 252852037 3.820000e-44 189.0
42 TraesCS3B01G118800 chr2A 95.882 170 7 0 142 311 53617284 53617115 2.850000e-70 276.0
43 TraesCS3B01G118800 chr2A 97.516 161 4 0 140 300 746687209 746687369 2.850000e-70 276.0
44 TraesCS3B01G118800 chr2A 95.322 171 8 0 133 303 4950757 4950587 3.690000e-69 272.0
45 TraesCS3B01G118800 chr5A 96.386 166 6 0 138 303 645772985 645772820 1.030000e-69 274.0
46 TraesCS3B01G118800 chr5A 94.857 175 7 2 127 300 394156731 394156904 3.690000e-69 272.0
47 TraesCS3B01G118800 chr1D 86.813 182 24 0 2353 2534 339046650 339046831 1.370000e-48 204.0
48 TraesCS3B01G118800 chr7D 82.703 185 28 4 2351 2534 603354223 603354042 8.340000e-36 161.0
49 TraesCS3B01G118800 chr2D 81.421 183 31 3 2353 2534 438011640 438011820 2.330000e-31 147.0
50 TraesCS3B01G118800 chr1B 94.667 75 4 0 2833 2907 338090535 338090461 1.830000e-22 117.0
51 TraesCS3B01G118800 chr1B 90.244 82 8 0 2826 2907 201004390 201004471 1.100000e-19 108.0
52 TraesCS3B01G118800 chr7B 93.421 76 5 0 2832 2907 525359003 525359078 2.370000e-21 113.0
53 TraesCS3B01G118800 chr4B 93.421 76 5 0 2832 2907 468351580 468351655 2.370000e-21 113.0
54 TraesCS3B01G118800 chr2B 93.421 76 5 0 2832 2907 268225935 268226010 2.370000e-21 113.0
55 TraesCS3B01G118800 chr2B 88.172 93 9 2 2814 2905 333554410 333554501 3.060000e-20 110.0
56 TraesCS3B01G118800 chr5B 92.105 76 6 0 2832 2907 169174484 169174409 1.100000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G118800 chr3B 88200797 88203703 2906 True 5369.000000 5369 100.00000 1 2907 1 chr3B.!!$R3 2906
1 TraesCS3B01G118800 chr3B 85339830 85340492 662 True 843.000000 843 89.74400 1102 1759 1 chr3B.!!$R1 657
2 TraesCS3B01G118800 chr3B 87717338 87719207 1869 True 635.000000 1914 91.39225 411 2351 4 chr3B.!!$R7 1940
3 TraesCS3B01G118800 chr3B 85237037 85239934 2897 True 412.000000 749 80.45800 702 1889 2 chr3B.!!$R6 1187
4 TraesCS3B01G118800 chr3D 56311529 56312571 1042 True 1066.000000 1066 85.54200 1192 2239 1 chr3D.!!$R1 1047
5 TraesCS3B01G118800 chr3D 56349236 56350537 1301 True 771.000000 1336 89.39650 848 2231 2 chr3D.!!$R7 1383
6 TraesCS3B01G118800 chr3D 56281615 56284393 2778 True 437.666667 922 89.87100 1 1814 3 chr3D.!!$R5 1813
7 TraesCS3B01G118800 chr3D 55349309 55350359 1050 True 397.500000 678 79.84700 702 1795 2 chr3D.!!$R4 1093
8 TraesCS3B01G118800 chr3D 56414233 56415076 843 True 351.500000 566 86.94600 1 1008 2 chr3D.!!$R9 1007
9 TraesCS3B01G118800 chr3D 56294375 56298335 3960 True 285.500000 409 87.58750 1 1814 4 chr3D.!!$R6 1813
10 TraesCS3B01G118800 chr3A 65700123 65700802 679 True 712.000000 712 85.65200 1111 1795 1 chr3A.!!$R1 684
11 TraesCS3B01G118800 chr3A 65765657 65766333 676 False 712.000000 712 85.73500 1111 1792 1 chr3A.!!$F1 681
12 TraesCS3B01G118800 chr3A 65828853 65830282 1429 True 530.500000 905 89.39700 2 1757 2 chr3A.!!$R2 1755
13 TraesCS3B01G118800 chr3A 12672984 12675366 2382 False 255.000000 255 89.65500 108 310 2 chr3A.!!$F2 202

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
563 958 0.103208 GGTCACACGAGCCCTATCAG 59.897 60.0 0.0 0.0 33.34 2.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2239 7774 0.027979 CAGGCCATAATTCGTGCGTG 59.972 55.0 5.01 0.0 33.95 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 2.498167 AGAACGCTGCAGACAAATTCT 58.502 42.857 20.43 14.18 33.33 2.40
35 36 0.449388 CGCTGCAGACAAATTCTCCC 59.551 55.000 20.43 0.00 28.96 4.30
40 41 1.739067 CAGACAAATTCTCCCCGGAC 58.261 55.000 0.73 0.00 28.96 4.79
46 47 1.358152 AATTCTCCCCGGACAACAGA 58.642 50.000 0.73 0.00 0.00 3.41
124 125 6.850752 AAACATGTTATTTTCTGGTAGGGG 57.149 37.500 12.39 0.00 0.00 4.79
162 163 1.137675 ACTCCCGCCGTTCCTAAATAC 59.862 52.381 0.00 0.00 0.00 1.89
245 246 7.516198 AAGTGTAGATTCACTCATTTTGCTT 57.484 32.000 0.00 0.00 46.25 3.91
258 259 6.818644 ACTCATTTTGCTTCGTATGTAGTCAT 59.181 34.615 0.00 0.00 38.00 3.06
271 272 7.119116 TCGTATGTAGTCATTTGTTGAAATGCT 59.881 33.333 0.00 0.00 45.61 3.79
300 301 5.021458 AGACAAGTATTTAGGAACGGAGGA 58.979 41.667 0.00 0.00 0.00 3.71
303 304 5.482878 ACAAGTATTTAGGAACGGAGGAAGA 59.517 40.000 0.00 0.00 0.00 2.87
304 305 5.855740 AGTATTTAGGAACGGAGGAAGAG 57.144 43.478 0.00 0.00 0.00 2.85
326 697 9.668497 AAGAGGAAGTACATTTTATGTTAGGTC 57.332 33.333 0.00 0.00 41.63 3.85
347 718 3.007614 TCGAAAAGGGAGACGGAGATTTT 59.992 43.478 0.00 0.00 0.00 1.82
359 730 0.733150 GAGATTTTGTACCGGCAGCC 59.267 55.000 0.00 0.00 0.00 4.85
387 764 9.746711 GTGTCAATATTTGTGATTATCTATCGC 57.253 33.333 0.00 0.00 42.83 4.58
447 825 7.716799 ACAATTATGAAGTCAGGGCAAAATA 57.283 32.000 0.00 0.00 0.00 1.40
466 844 0.692476 AGGTGTAGGCTTGCACATGA 59.308 50.000 18.23 0.00 41.15 3.07
537 932 1.143305 CAGTCACGAGGCTTTGTCAG 58.857 55.000 0.00 0.00 0.00 3.51
544 939 1.457346 GAGGCTTTGTCAGTGGATGG 58.543 55.000 0.00 0.00 0.00 3.51
563 958 0.103208 GGTCACACGAGCCCTATCAG 59.897 60.000 0.00 0.00 33.34 2.90
569 965 1.365633 CGAGCCCTATCAGTCAGCC 59.634 63.158 0.00 0.00 0.00 4.85
610 1018 4.929211 GGTGTTGGGTTGAATTTTCTATGC 59.071 41.667 0.00 0.00 0.00 3.14
647 1055 7.855904 CACATGTACGAGGAAAATAATTTAGGC 59.144 37.037 0.00 0.00 0.00 3.93
656 1064 7.611770 AGGAAAATAATTTAGGCAAACTGACC 58.388 34.615 0.00 0.00 0.00 4.02
678 1087 1.128809 TAGACGCCCCCTTGTTTCCA 61.129 55.000 0.00 0.00 0.00 3.53
724 1810 3.281727 CTGAAATAGCCAGCCTGGTTA 57.718 47.619 13.35 11.58 40.46 2.85
735 1830 4.153957 CTGGTTAGACAGGCCCCT 57.846 61.111 0.00 0.00 34.84 4.79
741 2308 2.355818 GGTTAGACAGGCCCCTAACTTG 60.356 54.545 26.12 11.04 42.47 3.16
754 2321 2.618045 CCTAACTTGGCAACCTACCAGG 60.618 54.545 0.00 0.00 42.49 4.45
767 2334 0.998928 TACCAGGGCCATGACACAAT 59.001 50.000 21.32 0.00 0.00 2.71
776 2343 3.443329 GGCCATGACACAATATGTTCACA 59.557 43.478 0.00 0.00 43.56 3.58
781 2348 6.072563 CCATGACACAATATGTTCACAGACAA 60.073 38.462 0.00 0.00 43.56 3.18
783 2350 5.049474 TGACACAATATGTTCACAGACAAGC 60.049 40.000 0.00 0.00 43.56 4.01
816 2383 1.208293 GATGGGACCAGAGGTTCAGTC 59.792 57.143 0.00 0.00 35.25 3.51
830 2430 2.201921 TCAGTCGGTCAGAAGCTACT 57.798 50.000 0.00 0.00 29.78 2.57
849 2449 4.698583 ACTTTAGCTCGCTATATACCCG 57.301 45.455 0.00 0.00 0.00 5.28
1017 4449 6.487689 AGAAGCACAAGTAACAAATAGCTC 57.512 37.500 0.00 0.00 0.00 4.09
1037 4475 2.947652 TCCACGTCTCCTCCTATTAACG 59.052 50.000 0.00 0.00 36.29 3.18
1046 4484 2.287668 CCTCCTATTAACGGCGTCAGAG 60.288 54.545 15.17 9.97 0.00 3.35
1048 4486 2.617308 TCCTATTAACGGCGTCAGAGAG 59.383 50.000 15.17 8.88 0.00 3.20
1050 4488 2.853731 ATTAACGGCGTCAGAGAGAG 57.146 50.000 15.17 0.00 0.00 3.20
1052 4490 1.370609 TAACGGCGTCAGAGAGAGAG 58.629 55.000 15.17 0.00 0.00 3.20
1054 4492 0.742990 ACGGCGTCAGAGAGAGAGAG 60.743 60.000 6.77 0.00 0.00 3.20
1056 4494 1.299541 GGCGTCAGAGAGAGAGAGAG 58.700 60.000 0.00 0.00 0.00 3.20
1058 4496 2.205074 GCGTCAGAGAGAGAGAGAGAG 58.795 57.143 0.00 0.00 0.00 3.20
1060 4498 3.711086 CGTCAGAGAGAGAGAGAGAGAG 58.289 54.545 0.00 0.00 0.00 3.20
1062 4500 4.498850 CGTCAGAGAGAGAGAGAGAGAGAG 60.499 54.167 0.00 0.00 0.00 3.20
1064 4502 4.892345 TCAGAGAGAGAGAGAGAGAGAGAG 59.108 50.000 0.00 0.00 0.00 3.20
1065 4503 4.892345 CAGAGAGAGAGAGAGAGAGAGAGA 59.108 50.000 0.00 0.00 0.00 3.10
1066 4504 5.009911 CAGAGAGAGAGAGAGAGAGAGAGAG 59.990 52.000 0.00 0.00 0.00 3.20
1067 4505 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1068 4506 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1069 4507 4.222336 AGAGAGAGAGAGAGAGAGAGAGG 58.778 52.174 0.00 0.00 0.00 3.69
1070 4508 3.312890 AGAGAGAGAGAGAGAGAGAGGG 58.687 54.545 0.00 0.00 0.00 4.30
1071 4509 3.051803 AGAGAGAGAGAGAGAGAGAGGGA 60.052 52.174 0.00 0.00 0.00 4.20
1072 4510 3.312890 AGAGAGAGAGAGAGAGAGGGAG 58.687 54.545 0.00 0.00 0.00 4.30
1073 4511 2.370189 GAGAGAGAGAGAGAGAGGGAGG 59.630 59.091 0.00 0.00 0.00 4.30
1074 4512 1.421646 GAGAGAGAGAGAGAGGGAGGG 59.578 61.905 0.00 0.00 0.00 4.30
1106 4544 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1107 4545 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1232 4685 3.741029 GAATGCAGTAGTCGAGGCA 57.259 52.632 0.00 0.00 41.00 4.75
1239 4695 2.541762 GCAGTAGTCGAGGCAATCATTC 59.458 50.000 0.00 0.00 0.00 2.67
1267 4723 4.410400 GCAGTACCGCCTGGCCTT 62.410 66.667 14.12 2.15 39.70 4.35
1268 4724 3.026431 GCAGTACCGCCTGGCCTTA 62.026 63.158 14.12 1.05 39.70 2.69
1444 4915 4.101448 GCACATCGGGCTCCAGGT 62.101 66.667 0.00 0.00 0.00 4.00
1471 4942 3.717294 ATGGTGGCGGGACAGGTC 61.717 66.667 0.00 0.00 0.00 3.85
1826 7276 3.734463 TGCACGAATGTACTTCTTTCCA 58.266 40.909 0.00 0.00 0.00 3.53
1980 7513 6.539103 GCTTGTAGCTACTAGCCACTTATTTT 59.461 38.462 35.69 0.00 45.15 1.82
2147 7681 4.232221 GCACTACTGCAAAACGTACTAGA 58.768 43.478 0.00 0.00 43.62 2.43
2148 7682 4.089636 GCACTACTGCAAAACGTACTAGAC 59.910 45.833 0.00 0.00 43.62 2.59
2149 7683 5.458891 CACTACTGCAAAACGTACTAGACT 58.541 41.667 0.00 0.00 0.00 3.24
2150 7684 6.605849 CACTACTGCAAAACGTACTAGACTA 58.394 40.000 0.00 0.00 0.00 2.59
2151 7685 6.522510 CACTACTGCAAAACGTACTAGACTAC 59.477 42.308 0.00 0.00 0.00 2.73
2152 7686 5.702349 ACTGCAAAACGTACTAGACTACT 57.298 39.130 0.00 0.00 0.00 2.57
2153 7687 6.808008 ACTGCAAAACGTACTAGACTACTA 57.192 37.500 0.00 0.00 0.00 1.82
2155 7689 6.652481 ACTGCAAAACGTACTAGACTACTAGA 59.348 38.462 10.60 0.00 46.34 2.43
2239 7774 1.880027 AGCCAACAATCAAGGACGAAC 59.120 47.619 0.00 0.00 0.00 3.95
2259 7794 1.095228 ACGCACGAATTATGGCCTGG 61.095 55.000 3.32 0.00 0.00 4.45
2280 7815 6.312399 TGGCGCTATATTTTGATGTAAAGG 57.688 37.500 7.64 0.00 0.00 3.11
2313 7849 1.126846 CAATCAAGGACGAAGACGCAC 59.873 52.381 0.00 0.00 43.96 5.34
2324 7860 1.003866 GAAGACGCACGAATTATGGCC 60.004 52.381 0.00 0.00 0.00 5.36
2325 7861 0.178068 AGACGCACGAATTATGGCCT 59.822 50.000 3.32 0.00 0.00 5.19
2326 7862 0.304705 GACGCACGAATTATGGCCTG 59.695 55.000 3.32 0.00 0.00 4.85
2327 7863 0.107897 ACGCACGAATTATGGCCTGA 60.108 50.000 3.32 0.00 0.00 3.86
2338 7874 1.136329 ATGGCCTGACTGGGTTGTCT 61.136 55.000 3.32 0.00 37.79 3.41
2351 7887 2.557056 GGGTTGTCTTTTCCAAGTAGCC 59.443 50.000 0.00 0.00 0.00 3.93
2352 7888 2.225727 GGTTGTCTTTTCCAAGTAGCCG 59.774 50.000 0.00 0.00 0.00 5.52
2353 7889 3.135994 GTTGTCTTTTCCAAGTAGCCGA 58.864 45.455 0.00 0.00 0.00 5.54
2354 7890 3.040147 TGTCTTTTCCAAGTAGCCGAG 57.960 47.619 0.00 0.00 0.00 4.63
2355 7891 2.367567 TGTCTTTTCCAAGTAGCCGAGT 59.632 45.455 0.00 0.00 0.00 4.18
2356 7892 3.575256 TGTCTTTTCCAAGTAGCCGAGTA 59.425 43.478 0.00 0.00 0.00 2.59
2357 7893 4.039488 TGTCTTTTCCAAGTAGCCGAGTAA 59.961 41.667 0.00 0.00 0.00 2.24
2358 7894 4.388165 GTCTTTTCCAAGTAGCCGAGTAAC 59.612 45.833 0.00 0.00 0.00 2.50
2359 7895 4.282703 TCTTTTCCAAGTAGCCGAGTAACT 59.717 41.667 0.00 0.00 0.00 2.24
2360 7896 4.612264 TTTCCAAGTAGCCGAGTAACTT 57.388 40.909 0.00 0.00 33.82 2.66
2361 7897 3.587797 TCCAAGTAGCCGAGTAACTTG 57.412 47.619 7.32 7.32 46.18 3.16
2362 7898 2.000447 CCAAGTAGCCGAGTAACTTGC 59.000 52.381 8.55 0.00 45.57 4.01
2363 7899 2.611971 CCAAGTAGCCGAGTAACTTGCA 60.612 50.000 8.55 0.00 45.57 4.08
2364 7900 2.365408 AGTAGCCGAGTAACTTGCAC 57.635 50.000 0.00 0.00 0.00 4.57
2365 7901 0.989890 GTAGCCGAGTAACTTGCACG 59.010 55.000 0.00 0.00 0.00 5.34
2366 7902 0.883153 TAGCCGAGTAACTTGCACGA 59.117 50.000 0.00 0.00 0.00 4.35
2367 7903 0.032952 AGCCGAGTAACTTGCACGAA 59.967 50.000 0.00 0.00 0.00 3.85
2368 7904 0.438830 GCCGAGTAACTTGCACGAAG 59.561 55.000 0.00 0.00 37.73 3.79
2369 7905 0.438830 CCGAGTAACTTGCACGAAGC 59.561 55.000 0.00 0.00 45.96 3.86
2370 7906 0.438830 CGAGTAACTTGCACGAAGCC 59.561 55.000 0.00 0.00 44.83 4.35
2371 7907 1.508632 GAGTAACTTGCACGAAGCCA 58.491 50.000 0.00 0.00 44.83 4.75
2372 7908 2.076863 GAGTAACTTGCACGAAGCCAT 58.923 47.619 0.00 0.00 44.83 4.40
2373 7909 2.076863 AGTAACTTGCACGAAGCCATC 58.923 47.619 0.00 0.00 44.83 3.51
2374 7910 1.804151 GTAACTTGCACGAAGCCATCA 59.196 47.619 0.00 0.00 44.83 3.07
2375 7911 0.593128 AACTTGCACGAAGCCATCAC 59.407 50.000 0.00 0.00 44.83 3.06
2376 7912 0.250467 ACTTGCACGAAGCCATCACT 60.250 50.000 0.00 0.00 44.83 3.41
2377 7913 0.877071 CTTGCACGAAGCCATCACTT 59.123 50.000 0.00 0.00 44.83 3.16
2378 7914 1.267806 CTTGCACGAAGCCATCACTTT 59.732 47.619 0.00 0.00 44.83 2.66
2379 7915 0.592637 TGCACGAAGCCATCACTTTG 59.407 50.000 0.00 0.00 44.83 2.77
2380 7916 0.874390 GCACGAAGCCATCACTTTGA 59.126 50.000 0.00 0.00 35.39 2.69
2381 7917 1.266718 GCACGAAGCCATCACTTTGAA 59.733 47.619 0.00 0.00 35.39 2.69
2382 7918 2.666619 GCACGAAGCCATCACTTTGAAG 60.667 50.000 0.00 0.00 35.39 3.02
2383 7919 2.095567 CACGAAGCCATCACTTTGAAGG 60.096 50.000 0.00 0.00 38.22 3.46
2389 7925 3.356529 CCATCACTTTGAAGGCTAGGT 57.643 47.619 0.00 0.00 27.75 3.08
2390 7926 3.690460 CCATCACTTTGAAGGCTAGGTT 58.310 45.455 0.00 0.00 27.75 3.50
2391 7927 4.082125 CCATCACTTTGAAGGCTAGGTTT 58.918 43.478 0.00 0.00 27.75 3.27
2392 7928 4.082571 CCATCACTTTGAAGGCTAGGTTTG 60.083 45.833 0.00 0.00 27.75 2.93
2393 7929 2.884639 TCACTTTGAAGGCTAGGTTTGC 59.115 45.455 0.00 0.00 0.00 3.68
2394 7930 2.622942 CACTTTGAAGGCTAGGTTTGCA 59.377 45.455 0.00 0.00 0.00 4.08
2395 7931 3.068024 CACTTTGAAGGCTAGGTTTGCAA 59.932 43.478 0.00 0.00 0.00 4.08
2396 7932 3.704061 ACTTTGAAGGCTAGGTTTGCAAA 59.296 39.130 8.05 8.05 0.00 3.68
2397 7933 4.161377 ACTTTGAAGGCTAGGTTTGCAAAA 59.839 37.500 14.67 0.00 0.00 2.44
2398 7934 4.744795 TTGAAGGCTAGGTTTGCAAAAA 57.255 36.364 14.67 1.65 0.00 1.94
2424 7960 9.448438 AACACTATGTTACAATTCTATTGCAGA 57.552 29.630 0.00 0.00 39.09 4.26
2430 7966 8.795786 TGTTACAATTCTATTGCAGAAAACAC 57.204 30.769 0.00 0.00 46.29 3.32
2431 7967 7.865385 TGTTACAATTCTATTGCAGAAAACACC 59.135 33.333 0.00 0.00 46.29 4.16
2432 7968 6.403866 ACAATTCTATTGCAGAAAACACCA 57.596 33.333 0.00 0.00 46.29 4.17
2433 7969 6.215845 ACAATTCTATTGCAGAAAACACCAC 58.784 36.000 0.00 0.00 46.29 4.16
2434 7970 4.481930 TTCTATTGCAGAAAACACCACG 57.518 40.909 0.00 0.00 40.40 4.94
2435 7971 3.472652 TCTATTGCAGAAAACACCACGT 58.527 40.909 0.00 0.00 0.00 4.49
2436 7972 2.774439 ATTGCAGAAAACACCACGTC 57.226 45.000 0.00 0.00 0.00 4.34
2437 7973 1.745232 TTGCAGAAAACACCACGTCT 58.255 45.000 0.00 0.00 0.00 4.18
2438 7974 1.745232 TGCAGAAAACACCACGTCTT 58.255 45.000 0.00 0.00 0.00 3.01
2439 7975 1.400142 TGCAGAAAACACCACGTCTTG 59.600 47.619 0.00 0.00 0.00 3.02
2440 7976 1.400494 GCAGAAAACACCACGTCTTGT 59.600 47.619 0.00 0.00 0.00 3.16
2453 7989 5.729665 CACGTCTTGTGTAATCATTTTGC 57.270 39.130 0.00 0.00 43.88 3.68
2454 7990 5.211454 CACGTCTTGTGTAATCATTTTGCA 58.789 37.500 0.00 0.00 43.88 4.08
2455 7991 5.685068 CACGTCTTGTGTAATCATTTTGCAA 59.315 36.000 0.00 0.00 43.88 4.08
2456 7992 6.198029 CACGTCTTGTGTAATCATTTTGCAAA 59.802 34.615 8.05 8.05 43.88 3.68
2457 7993 6.754209 ACGTCTTGTGTAATCATTTTGCAAAA 59.246 30.769 25.76 25.76 0.00 2.44
2458 7994 7.043458 ACGTCTTGTGTAATCATTTTGCAAAAG 60.043 33.333 27.08 19.01 0.00 2.27
2459 7995 7.065283 GTCTTGTGTAATCATTTTGCAAAAGC 58.935 34.615 27.08 13.96 0.00 3.51
2460 7996 5.921004 TGTGTAATCATTTTGCAAAAGCC 57.079 34.783 27.08 12.60 0.00 4.35
2461 7997 5.363101 TGTGTAATCATTTTGCAAAAGCCA 58.637 33.333 27.08 14.93 0.00 4.75
2462 7998 5.996513 TGTGTAATCATTTTGCAAAAGCCAT 59.003 32.000 27.08 16.33 0.00 4.40
2463 7999 6.485984 TGTGTAATCATTTTGCAAAAGCCATT 59.514 30.769 27.08 23.29 0.00 3.16
2464 8000 6.797995 GTGTAATCATTTTGCAAAAGCCATTG 59.202 34.615 27.08 20.01 0.00 2.82
2465 8001 6.709397 TGTAATCATTTTGCAAAAGCCATTGA 59.291 30.769 27.08 23.85 31.84 2.57
2466 8002 6.827586 AATCATTTTGCAAAAGCCATTGAT 57.172 29.167 27.08 24.78 31.84 2.57
2467 8003 5.866335 TCATTTTGCAAAAGCCATTGATC 57.134 34.783 27.08 0.00 31.84 2.92
2468 8004 4.389382 TCATTTTGCAAAAGCCATTGATCG 59.611 37.500 27.08 7.69 31.84 3.69
2469 8005 2.367030 TTGCAAAAGCCATTGATCGG 57.633 45.000 0.00 0.00 31.84 4.18
2475 8011 3.749981 GCCATTGATCGGCGGATT 58.250 55.556 7.21 0.00 40.35 3.01
2476 8012 2.927004 GCCATTGATCGGCGGATTA 58.073 52.632 7.21 1.07 40.35 1.75
2477 8013 0.798776 GCCATTGATCGGCGGATTAG 59.201 55.000 7.21 0.00 40.35 1.73
2478 8014 1.608025 GCCATTGATCGGCGGATTAGA 60.608 52.381 7.21 0.00 40.35 2.10
2479 8015 2.069273 CCATTGATCGGCGGATTAGAC 58.931 52.381 7.21 0.00 31.51 2.59
2480 8016 2.289072 CCATTGATCGGCGGATTAGACT 60.289 50.000 7.21 0.00 31.51 3.24
2481 8017 2.795175 TTGATCGGCGGATTAGACTC 57.205 50.000 7.21 0.00 31.51 3.36
2482 8018 0.591659 TGATCGGCGGATTAGACTCG 59.408 55.000 7.21 0.00 31.51 4.18
2483 8019 0.592148 GATCGGCGGATTAGACTCGT 59.408 55.000 7.21 0.00 31.51 4.18
2484 8020 1.001597 GATCGGCGGATTAGACTCGTT 60.002 52.381 7.21 0.00 31.51 3.85
2485 8021 0.813184 TCGGCGGATTAGACTCGTTT 59.187 50.000 7.21 0.00 0.00 3.60
2486 8022 0.921347 CGGCGGATTAGACTCGTTTG 59.079 55.000 0.00 0.00 0.00 2.93
2487 8023 1.468565 CGGCGGATTAGACTCGTTTGA 60.469 52.381 0.00 0.00 0.00 2.69
2489 8025 1.588861 GCGGATTAGACTCGTTTGAGC 59.411 52.381 0.00 0.00 46.69 4.26
2490 8026 1.846782 CGGATTAGACTCGTTTGAGCG 59.153 52.381 0.00 0.00 46.69 5.03
2491 8027 2.731341 CGGATTAGACTCGTTTGAGCGT 60.731 50.000 0.00 0.00 46.69 5.07
2492 8028 2.599082 GGATTAGACTCGTTTGAGCGTG 59.401 50.000 0.00 0.00 46.69 5.34
2496 8032 3.088194 AGACTCGTTTGAGCGTGTTTA 57.912 42.857 0.00 0.00 46.69 2.01
2497 8033 3.650139 AGACTCGTTTGAGCGTGTTTAT 58.350 40.909 0.00 0.00 46.69 1.40
2500 8036 3.183775 ACTCGTTTGAGCGTGTTTATGAC 59.816 43.478 0.00 0.00 46.69 3.06
2501 8037 3.124560 TCGTTTGAGCGTGTTTATGACA 58.875 40.909 0.00 0.00 35.42 3.58
2503 8039 3.664276 CGTTTGAGCGTGTTTATGACAGG 60.664 47.826 0.00 0.00 44.82 4.00
2504 8040 2.831685 TGAGCGTGTTTATGACAGGT 57.168 45.000 5.88 0.00 44.08 4.00
2507 8043 2.668457 GAGCGTGTTTATGACAGGTGAG 59.332 50.000 5.88 0.00 44.08 3.51
2510 8046 2.993899 CGTGTTTATGACAGGTGAGTCC 59.006 50.000 0.00 0.00 39.39 3.85
2512 8048 2.976185 TGTTTATGACAGGTGAGTCCCA 59.024 45.455 0.00 0.00 37.73 4.37
2514 8050 2.623418 TATGACAGGTGAGTCCCACT 57.377 50.000 0.00 0.00 45.03 4.00
2522 8058 1.338020 GGTGAGTCCCACTTTTTGCTG 59.662 52.381 0.00 0.00 45.03 4.41
2523 8059 2.297701 GTGAGTCCCACTTTTTGCTGA 58.702 47.619 0.00 0.00 42.44 4.26
2524 8060 2.033424 GTGAGTCCCACTTTTTGCTGAC 59.967 50.000 0.00 0.00 42.44 3.51
2525 8061 1.264288 GAGTCCCACTTTTTGCTGACG 59.736 52.381 0.00 0.00 33.08 4.35
2526 8062 1.021968 GTCCCACTTTTTGCTGACGT 58.978 50.000 0.00 0.00 0.00 4.34
2527 8063 1.021202 TCCCACTTTTTGCTGACGTG 58.979 50.000 0.00 0.00 0.00 4.49
2529 8065 0.594796 CCACTTTTTGCTGACGTGGC 60.595 55.000 0.00 0.00 38.72 5.01
2531 8067 1.032014 ACTTTTTGCTGACGTGGCAT 58.968 45.000 12.56 0.00 39.54 4.40
2532 8068 2.031245 CACTTTTTGCTGACGTGGCATA 60.031 45.455 12.56 6.43 39.54 3.14
2533 8069 2.621055 ACTTTTTGCTGACGTGGCATAA 59.379 40.909 12.56 11.32 39.54 1.90
2534 8070 3.255642 ACTTTTTGCTGACGTGGCATAAT 59.744 39.130 12.56 0.40 39.54 1.28
2535 8071 2.917701 TTTGCTGACGTGGCATAATG 57.082 45.000 12.56 0.00 39.54 1.90
2536 8072 1.093972 TTGCTGACGTGGCATAATGG 58.906 50.000 12.56 0.00 39.54 3.16
2538 8074 1.094785 GCTGACGTGGCATAATGGTT 58.905 50.000 0.00 0.00 0.00 3.67
2540 8076 2.731968 GCTGACGTGGCATAATGGTTTG 60.732 50.000 0.00 0.00 0.00 2.93
2541 8077 2.746904 CTGACGTGGCATAATGGTTTGA 59.253 45.455 0.00 0.00 0.00 2.69
2542 8078 2.746904 TGACGTGGCATAATGGTTTGAG 59.253 45.455 0.00 0.00 0.00 3.02
2543 8079 2.091541 ACGTGGCATAATGGTTTGAGG 58.908 47.619 0.00 0.00 0.00 3.86
2547 8083 3.953612 GTGGCATAATGGTTTGAGGATGA 59.046 43.478 0.00 0.00 0.00 2.92
2549 8085 3.003689 GGCATAATGGTTTGAGGATGACG 59.996 47.826 0.00 0.00 0.00 4.35
2550 8086 3.003689 GCATAATGGTTTGAGGATGACGG 59.996 47.826 0.00 0.00 0.00 4.79
2551 8087 1.463674 AATGGTTTGAGGATGACGGC 58.536 50.000 0.00 0.00 0.00 5.68
2552 8088 0.744414 ATGGTTTGAGGATGACGGCG 60.744 55.000 4.80 4.80 0.00 6.46
2553 8089 1.375523 GGTTTGAGGATGACGGCGT 60.376 57.895 14.65 14.65 0.00 5.68
2554 8090 0.953960 GGTTTGAGGATGACGGCGTT 60.954 55.000 16.19 0.00 0.00 4.84
2555 8091 1.673626 GGTTTGAGGATGACGGCGTTA 60.674 52.381 16.19 11.49 0.00 3.18
2557 8093 2.459060 TTGAGGATGACGGCGTTAAA 57.541 45.000 16.19 3.37 0.00 1.52
2558 8094 2.684001 TGAGGATGACGGCGTTAAAT 57.316 45.000 16.19 8.86 0.00 1.40
2559 8095 2.276201 TGAGGATGACGGCGTTAAATG 58.724 47.619 16.19 0.00 0.00 2.32
2560 8096 2.093921 TGAGGATGACGGCGTTAAATGA 60.094 45.455 16.19 0.00 0.00 2.57
2561 8097 2.540101 GAGGATGACGGCGTTAAATGAG 59.460 50.000 16.19 0.00 0.00 2.90
2562 8098 2.093658 AGGATGACGGCGTTAAATGAGT 60.094 45.455 16.19 0.00 0.00 3.41
2567 8103 5.670149 TGACGGCGTTAAATGAGTTTTAA 57.330 34.783 16.19 0.00 37.42 1.52
2568 8104 6.057627 TGACGGCGTTAAATGAGTTTTAAA 57.942 33.333 16.19 0.00 40.53 1.52
2569 8105 6.670233 TGACGGCGTTAAATGAGTTTTAAAT 58.330 32.000 16.19 0.00 40.53 1.40
2570 8106 6.797995 TGACGGCGTTAAATGAGTTTTAAATC 59.202 34.615 16.19 0.00 40.53 2.17
2571 8107 6.670233 ACGGCGTTAAATGAGTTTTAAATCA 58.330 32.000 6.77 0.00 40.53 2.57
2572 8108 7.140048 ACGGCGTTAAATGAGTTTTAAATCAA 58.860 30.769 6.77 0.00 40.53 2.57
2573 8109 7.648510 ACGGCGTTAAATGAGTTTTAAATCAAA 59.351 29.630 6.77 0.00 40.53 2.69
2590 8126 3.968212 AAAAAGCCCCCAACCTTCT 57.032 47.368 0.00 0.00 0.00 2.85
2591 8127 2.190398 AAAAAGCCCCCAACCTTCTT 57.810 45.000 0.00 0.00 0.00 2.52
2592 8128 1.717032 AAAAGCCCCCAACCTTCTTC 58.283 50.000 0.00 0.00 0.00 2.87
2593 8129 0.178932 AAAGCCCCCAACCTTCTTCC 60.179 55.000 0.00 0.00 0.00 3.46
2594 8130 1.074296 AAGCCCCCAACCTTCTTCCT 61.074 55.000 0.00 0.00 0.00 3.36
2595 8131 1.304464 GCCCCCAACCTTCTTCCTG 60.304 63.158 0.00 0.00 0.00 3.86
2596 8132 1.384191 CCCCCAACCTTCTTCCTGG 59.616 63.158 0.00 0.00 0.00 4.45
2597 8133 1.435346 CCCCCAACCTTCTTCCTGGT 61.435 60.000 0.00 0.00 38.35 4.00
2598 8134 0.251341 CCCCAACCTTCTTCCTGGTG 60.251 60.000 0.00 0.00 36.57 4.17
2599 8135 0.895559 CCCAACCTTCTTCCTGGTGC 60.896 60.000 0.00 0.00 36.57 5.01
2600 8136 0.895559 CCAACCTTCTTCCTGGTGCC 60.896 60.000 0.00 0.00 36.57 5.01
2601 8137 0.895559 CAACCTTCTTCCTGGTGCCC 60.896 60.000 0.00 0.00 36.57 5.36
2602 8138 2.081585 AACCTTCTTCCTGGTGCCCC 62.082 60.000 0.00 0.00 36.57 5.80
2603 8139 2.356667 CTTCTTCCTGGTGCCCCC 59.643 66.667 0.00 0.00 0.00 5.40
2626 8162 4.379174 CCCCCACTTCGTGAGTTG 57.621 61.111 0.00 0.00 36.10 3.16
2627 8163 1.302511 CCCCCACTTCGTGAGTTGG 60.303 63.158 0.00 5.31 40.15 3.77
2628 8164 1.966451 CCCCACTTCGTGAGTTGGC 60.966 63.158 6.38 0.00 39.34 4.52
2629 8165 1.966451 CCCACTTCGTGAGTTGGCC 60.966 63.158 0.00 0.00 34.70 5.36
2630 8166 2.317609 CCACTTCGTGAGTTGGCCG 61.318 63.158 0.00 0.00 36.10 6.13
2631 8167 2.030562 ACTTCGTGAGTTGGCCGG 59.969 61.111 0.00 0.00 33.92 6.13
2632 8168 2.342279 CTTCGTGAGTTGGCCGGA 59.658 61.111 5.05 0.00 0.00 5.14
2633 8169 1.738099 CTTCGTGAGTTGGCCGGAG 60.738 63.158 5.05 0.00 0.00 4.63
2634 8170 2.154798 CTTCGTGAGTTGGCCGGAGA 62.155 60.000 5.05 0.00 28.41 3.71
2635 8171 2.430382 TTCGTGAGTTGGCCGGAGAC 62.430 60.000 5.05 0.00 0.00 3.36
2636 8172 2.741092 GTGAGTTGGCCGGAGACA 59.259 61.111 5.05 0.00 0.00 3.41
2637 8173 1.668151 GTGAGTTGGCCGGAGACAC 60.668 63.158 5.05 2.11 0.00 3.67
2638 8174 2.047179 GAGTTGGCCGGAGACACC 60.047 66.667 5.05 0.00 0.00 4.16
2681 8217 2.125106 GTGGCCGGAGACACCATC 60.125 66.667 5.05 0.00 38.37 3.51
2682 8218 3.399181 TGGCCGGAGACACCATCC 61.399 66.667 5.05 0.00 38.90 3.51
2683 8219 4.176752 GGCCGGAGACACCATCCC 62.177 72.222 5.05 0.00 38.90 3.85
2684 8220 3.083997 GCCGGAGACACCATCCCT 61.084 66.667 5.05 0.00 38.90 4.20
2685 8221 2.903357 CCGGAGACACCATCCCTG 59.097 66.667 0.00 0.00 38.90 4.45
2686 8222 2.187946 CGGAGACACCATCCCTGC 59.812 66.667 0.00 0.00 38.90 4.85
2687 8223 2.362369 CGGAGACACCATCCCTGCT 61.362 63.158 0.00 0.00 38.90 4.24
2688 8224 1.222936 GGAGACACCATCCCTGCTG 59.777 63.158 0.00 0.00 38.79 4.41
2689 8225 1.451028 GAGACACCATCCCTGCTGC 60.451 63.158 0.00 0.00 0.00 5.25
2690 8226 2.189191 GAGACACCATCCCTGCTGCA 62.189 60.000 0.88 0.88 0.00 4.41
2691 8227 1.077212 GACACCATCCCTGCTGCAT 60.077 57.895 1.31 0.00 0.00 3.96
2692 8228 0.181114 GACACCATCCCTGCTGCATA 59.819 55.000 1.31 0.00 0.00 3.14
2693 8229 0.625316 ACACCATCCCTGCTGCATAA 59.375 50.000 1.31 0.00 0.00 1.90
2694 8230 1.216175 ACACCATCCCTGCTGCATAAT 59.784 47.619 1.31 0.00 0.00 1.28
2695 8231 2.313317 CACCATCCCTGCTGCATAATT 58.687 47.619 1.31 0.00 0.00 1.40
2696 8232 2.035449 CACCATCCCTGCTGCATAATTG 59.965 50.000 1.31 0.00 0.00 2.32
2697 8233 1.616865 CCATCCCTGCTGCATAATTGG 59.383 52.381 1.31 5.16 0.00 3.16
2698 8234 1.616865 CATCCCTGCTGCATAATTGGG 59.383 52.381 15.72 15.72 36.14 4.12
2699 8235 0.756442 TCCCTGCTGCATAATTGGGC 60.756 55.000 16.75 0.00 34.89 5.36
2700 8236 1.044231 CCCTGCTGCATAATTGGGCA 61.044 55.000 10.53 5.83 38.52 5.36
2701 8237 0.825410 CCTGCTGCATAATTGGGCAA 59.175 50.000 1.31 0.00 39.93 4.52
2702 8238 1.207570 CCTGCTGCATAATTGGGCAAA 59.792 47.619 1.31 0.00 39.93 3.68
2703 8239 2.273557 CTGCTGCATAATTGGGCAAAC 58.726 47.619 1.31 3.98 39.93 2.93
2704 8240 1.066286 TGCTGCATAATTGGGCAAACC 60.066 47.619 0.00 0.00 39.93 3.27
2712 8248 2.598394 TGGGCAAACCAGCTGCTC 60.598 61.111 8.66 0.00 46.80 4.26
2713 8249 3.376918 GGGCAAACCAGCTGCTCC 61.377 66.667 8.66 3.88 39.82 4.70
2714 8250 3.376918 GGCAAACCAGCTGCTCCC 61.377 66.667 8.66 0.00 39.82 4.30
2715 8251 2.598394 GCAAACCAGCTGCTCCCA 60.598 61.111 8.66 0.00 36.84 4.37
2716 8252 1.980772 GCAAACCAGCTGCTCCCAT 60.981 57.895 8.66 0.00 36.84 4.00
2717 8253 1.941999 GCAAACCAGCTGCTCCCATC 61.942 60.000 8.66 0.00 36.84 3.51
2718 8254 1.000396 AAACCAGCTGCTCCCATCC 60.000 57.895 8.66 0.00 0.00 3.51
2719 8255 2.826777 AAACCAGCTGCTCCCATCCG 62.827 60.000 8.66 0.00 0.00 4.18
2720 8256 3.473647 CCAGCTGCTCCCATCCGA 61.474 66.667 8.66 0.00 0.00 4.55
2721 8257 2.108566 CAGCTGCTCCCATCCGAG 59.891 66.667 0.00 0.00 0.00 4.63
2722 8258 3.160047 AGCTGCTCCCATCCGAGG 61.160 66.667 0.00 0.00 0.00 4.63
2723 8259 3.157252 GCTGCTCCCATCCGAGGA 61.157 66.667 0.00 0.00 0.00 3.71
2727 8263 3.136750 CTCCCATCCGAGGAGCAG 58.863 66.667 0.00 0.00 44.30 4.24
2728 8264 3.157252 TCCCATCCGAGGAGCAGC 61.157 66.667 0.00 0.00 0.00 5.25
2729 8265 4.247380 CCCATCCGAGGAGCAGCC 62.247 72.222 0.00 0.00 0.00 4.85
2738 8274 4.496336 GGAGCAGCCTTCCGCCAT 62.496 66.667 0.00 0.00 38.78 4.40
2739 8275 3.207669 GAGCAGCCTTCCGCCATG 61.208 66.667 0.00 0.00 38.78 3.66
2742 8278 3.515286 CAGCCTTCCGCCATGCTG 61.515 66.667 0.00 0.00 44.43 4.41
2743 8279 4.809496 AGCCTTCCGCCATGCTGG 62.809 66.667 0.00 0.00 41.55 4.85
2744 8280 4.802051 GCCTTCCGCCATGCTGGA 62.802 66.667 6.40 0.33 40.96 3.86
2745 8281 2.515523 CCTTCCGCCATGCTGGAG 60.516 66.667 6.40 3.16 40.96 3.86
2746 8282 3.207669 CTTCCGCCATGCTGGAGC 61.208 66.667 6.40 0.00 40.96 4.70
2747 8283 3.694058 CTTCCGCCATGCTGGAGCT 62.694 63.158 6.40 0.00 40.96 4.09
2748 8284 3.687321 TTCCGCCATGCTGGAGCTC 62.687 63.158 4.71 4.71 40.96 4.09
2751 8287 4.891037 GCCATGCTGGAGCTCCCC 62.891 72.222 29.95 20.38 40.96 4.81
2752 8288 3.095163 CCATGCTGGAGCTCCCCT 61.095 66.667 29.95 8.91 40.96 4.79
2753 8289 2.687610 CCATGCTGGAGCTCCCCTT 61.688 63.158 29.95 15.45 40.96 3.95
2754 8290 1.153005 CATGCTGGAGCTCCCCTTC 60.153 63.158 29.95 15.68 42.66 3.46
2755 8291 2.381941 ATGCTGGAGCTCCCCTTCC 61.382 63.158 29.95 13.34 42.66 3.46
2756 8292 4.168291 GCTGGAGCTCCCCTTCCG 62.168 72.222 29.95 11.82 38.21 4.30
2757 8293 4.168291 CTGGAGCTCCCCTTCCGC 62.168 72.222 29.95 2.66 34.29 5.54
2762 8298 3.168528 GCTCCCCTTCCGCCCATA 61.169 66.667 0.00 0.00 0.00 2.74
2763 8299 3.151906 CTCCCCTTCCGCCCATAG 58.848 66.667 0.00 0.00 0.00 2.23
2764 8300 3.168528 TCCCCTTCCGCCCATAGC 61.169 66.667 0.00 0.00 38.52 2.97
2765 8301 4.271016 CCCCTTCCGCCCATAGCC 62.271 72.222 0.00 0.00 38.78 3.93
2766 8302 4.626081 CCCTTCCGCCCATAGCCG 62.626 72.222 0.00 0.00 38.78 5.52
2767 8303 4.626081 CCTTCCGCCCATAGCCGG 62.626 72.222 0.00 0.00 38.78 6.13
2790 8326 4.451150 GGCGGTGTGGCATCTCGA 62.451 66.667 9.75 0.00 44.08 4.04
2791 8327 2.887568 GCGGTGTGGCATCTCGAG 60.888 66.667 5.93 5.93 0.00 4.04
2792 8328 2.887568 CGGTGTGGCATCTCGAGC 60.888 66.667 7.81 0.00 0.00 5.03
2793 8329 2.887568 GGTGTGGCATCTCGAGCG 60.888 66.667 7.81 2.08 0.00 5.03
2794 8330 3.558411 GTGTGGCATCTCGAGCGC 61.558 66.667 15.87 15.87 0.00 5.92
2795 8331 4.819761 TGTGGCATCTCGAGCGCC 62.820 66.667 28.90 28.90 46.43 6.53
2819 8355 4.349503 TGCCGCACCTTCTGCCAT 62.350 61.111 0.00 0.00 43.84 4.40
2820 8356 3.818787 GCCGCACCTTCTGCCATG 61.819 66.667 0.00 0.00 43.84 3.66
2821 8357 2.046023 CCGCACCTTCTGCCATGA 60.046 61.111 0.00 0.00 43.84 3.07
2822 8358 1.452651 CCGCACCTTCTGCCATGAT 60.453 57.895 0.00 0.00 43.84 2.45
2823 8359 1.721664 CCGCACCTTCTGCCATGATG 61.722 60.000 0.00 0.00 43.84 3.07
2824 8360 1.721664 CGCACCTTCTGCCATGATGG 61.722 60.000 7.21 7.21 43.84 3.51
2825 8361 0.394762 GCACCTTCTGCCATGATGGA 60.395 55.000 17.22 0.00 40.96 3.41
2826 8362 1.676746 CACCTTCTGCCATGATGGAG 58.323 55.000 17.22 9.90 40.96 3.86
2827 8363 0.106819 ACCTTCTGCCATGATGGAGC 60.107 55.000 17.22 0.56 40.96 4.70
2828 8364 0.183014 CCTTCTGCCATGATGGAGCT 59.817 55.000 17.22 0.00 40.96 4.09
2829 8365 1.595466 CTTCTGCCATGATGGAGCTC 58.405 55.000 17.22 4.71 40.96 4.09
2830 8366 0.182061 TTCTGCCATGATGGAGCTCC 59.818 55.000 26.78 26.78 40.96 4.70
2831 8367 1.228184 CTGCCATGATGGAGCTCCC 60.228 63.158 29.95 15.94 40.96 4.30
2832 8368 1.695239 TGCCATGATGGAGCTCCCT 60.695 57.895 29.95 20.98 40.96 4.20
2833 8369 1.228184 GCCATGATGGAGCTCCCTG 60.228 63.158 29.95 19.79 40.96 4.45
2834 8370 1.703014 GCCATGATGGAGCTCCCTGA 61.703 60.000 29.95 15.43 40.96 3.86
2835 8371 1.065647 CCATGATGGAGCTCCCTGAT 58.934 55.000 29.95 17.18 40.96 2.90
2836 8372 1.271434 CCATGATGGAGCTCCCTGATG 60.271 57.143 29.95 26.65 40.96 3.07
2837 8373 1.065647 ATGATGGAGCTCCCTGATGG 58.934 55.000 29.95 0.00 35.38 3.51
2838 8374 0.030807 TGATGGAGCTCCCTGATGGA 60.031 55.000 29.95 9.88 42.41 3.41
2845 8381 4.816109 TCCCTGATGGAGTCCTGG 57.184 61.111 11.33 7.34 38.61 4.45
2846 8382 2.105213 TCCCTGATGGAGTCCTGGA 58.895 57.895 11.33 5.86 38.61 3.86
2847 8383 0.325671 TCCCTGATGGAGTCCTGGAC 60.326 60.000 19.20 19.20 38.61 4.02
2848 8384 0.326048 CCCTGATGGAGTCCTGGACT 60.326 60.000 28.70 28.70 46.42 3.85
2849 8385 1.062886 CCCTGATGGAGTCCTGGACTA 60.063 57.143 28.41 15.22 43.53 2.59
2850 8386 2.626950 CCCTGATGGAGTCCTGGACTAA 60.627 54.545 28.41 19.78 43.53 2.24
2851 8387 2.697751 CCTGATGGAGTCCTGGACTAAG 59.302 54.545 28.41 18.77 43.53 2.18
2852 8388 2.697751 CTGATGGAGTCCTGGACTAAGG 59.302 54.545 28.41 12.06 43.53 2.69
2853 8389 2.043227 GATGGAGTCCTGGACTAAGGG 58.957 57.143 28.41 0.00 43.53 3.95
2854 8390 0.042731 TGGAGTCCTGGACTAAGGGG 59.957 60.000 28.41 0.00 43.53 4.79
2855 8391 0.042881 GGAGTCCTGGACTAAGGGGT 59.957 60.000 28.41 5.74 43.53 4.95
2856 8392 1.487300 GAGTCCTGGACTAAGGGGTC 58.513 60.000 28.41 11.40 43.53 4.46
2863 8399 2.502633 GACTAAGGGGTCCTCGGAC 58.497 63.158 7.57 7.57 43.87 4.79
2864 8400 0.324091 GACTAAGGGGTCCTCGGACA 60.324 60.000 17.21 0.00 46.20 4.02
2865 8401 0.324460 ACTAAGGGGTCCTCGGACAG 60.324 60.000 17.21 8.32 46.20 3.51
2866 8402 1.677637 CTAAGGGGTCCTCGGACAGC 61.678 65.000 17.21 1.56 46.20 4.40
2867 8403 2.164332 TAAGGGGTCCTCGGACAGCT 62.164 60.000 17.21 2.23 46.20 4.24
2868 8404 3.775654 GGGGTCCTCGGACAGCTG 61.776 72.222 13.48 13.48 46.20 4.24
2869 8405 2.680352 GGGTCCTCGGACAGCTGA 60.680 66.667 23.35 0.00 46.20 4.26
2870 8406 2.283529 GGGTCCTCGGACAGCTGAA 61.284 63.158 23.35 1.58 46.20 3.02
2871 8407 1.079750 GGTCCTCGGACAGCTGAAC 60.080 63.158 23.35 13.63 46.20 3.18
2872 8408 1.536943 GGTCCTCGGACAGCTGAACT 61.537 60.000 23.35 0.00 46.20 3.01
2873 8409 1.174783 GTCCTCGGACAGCTGAACTA 58.825 55.000 23.35 3.59 44.02 2.24
2874 8410 1.751924 GTCCTCGGACAGCTGAACTAT 59.248 52.381 23.35 0.00 44.02 2.12
2875 8411 2.950309 GTCCTCGGACAGCTGAACTATA 59.050 50.000 23.35 0.00 44.02 1.31
2876 8412 3.570550 GTCCTCGGACAGCTGAACTATAT 59.429 47.826 23.35 0.00 44.02 0.86
2877 8413 4.760715 GTCCTCGGACAGCTGAACTATATA 59.239 45.833 23.35 0.00 44.02 0.86
2878 8414 4.760715 TCCTCGGACAGCTGAACTATATAC 59.239 45.833 23.35 0.00 0.00 1.47
2879 8415 4.519350 CCTCGGACAGCTGAACTATATACA 59.481 45.833 23.35 0.00 0.00 2.29
2880 8416 5.184096 CCTCGGACAGCTGAACTATATACAT 59.816 44.000 23.35 0.00 0.00 2.29
2881 8417 6.294787 CCTCGGACAGCTGAACTATATACATT 60.295 42.308 23.35 0.00 0.00 2.71
2882 8418 6.447162 TCGGACAGCTGAACTATATACATTG 58.553 40.000 23.35 0.00 0.00 2.82
2883 8419 5.635280 CGGACAGCTGAACTATATACATTGG 59.365 44.000 23.35 0.00 0.00 3.16
2884 8420 5.409826 GGACAGCTGAACTATATACATTGGC 59.590 44.000 23.35 0.00 0.00 4.52
2885 8421 5.308825 ACAGCTGAACTATATACATTGGCC 58.691 41.667 23.35 0.00 0.00 5.36
2886 8422 4.389992 CAGCTGAACTATATACATTGGCCG 59.610 45.833 8.42 0.00 0.00 6.13
2887 8423 3.684788 GCTGAACTATATACATTGGCCGG 59.315 47.826 0.00 0.00 0.00 6.13
2888 8424 4.562757 GCTGAACTATATACATTGGCCGGA 60.563 45.833 5.05 0.00 0.00 5.14
2889 8425 5.734720 CTGAACTATATACATTGGCCGGAT 58.265 41.667 5.05 0.00 0.00 4.18
2890 8426 6.121776 TGAACTATATACATTGGCCGGATT 57.878 37.500 5.05 0.00 0.00 3.01
2891 8427 5.937540 TGAACTATATACATTGGCCGGATTG 59.062 40.000 5.05 0.00 0.00 2.67
2892 8428 5.499004 ACTATATACATTGGCCGGATTGT 57.501 39.130 5.05 4.84 0.00 2.71
2893 8429 5.876357 ACTATATACATTGGCCGGATTGTT 58.124 37.500 5.05 0.00 0.00 2.83
2894 8430 5.705441 ACTATATACATTGGCCGGATTGTTG 59.295 40.000 5.05 0.00 0.00 3.33
2895 8431 1.468985 TACATTGGCCGGATTGTTGG 58.531 50.000 5.05 0.00 0.00 3.77
2896 8432 1.257055 ACATTGGCCGGATTGTTGGG 61.257 55.000 5.05 0.00 0.00 4.12
2897 8433 1.078347 ATTGGCCGGATTGTTGGGT 59.922 52.632 5.05 0.00 0.00 4.51
2898 8434 0.544120 ATTGGCCGGATTGTTGGGTT 60.544 50.000 5.05 0.00 0.00 4.11
2899 8435 0.112606 TTGGCCGGATTGTTGGGTTA 59.887 50.000 5.05 0.00 0.00 2.85
2900 8436 0.333312 TGGCCGGATTGTTGGGTTAT 59.667 50.000 5.05 0.00 0.00 1.89
2901 8437 0.744281 GGCCGGATTGTTGGGTTATG 59.256 55.000 5.05 0.00 0.00 1.90
2902 8438 1.683629 GGCCGGATTGTTGGGTTATGA 60.684 52.381 5.05 0.00 0.00 2.15
2903 8439 2.096248 GCCGGATTGTTGGGTTATGAA 58.904 47.619 5.05 0.00 0.00 2.57
2904 8440 2.099098 GCCGGATTGTTGGGTTATGAAG 59.901 50.000 5.05 0.00 0.00 3.02
2905 8441 3.616219 CCGGATTGTTGGGTTATGAAGA 58.384 45.455 0.00 0.00 0.00 2.87
2906 8442 4.207165 CCGGATTGTTGGGTTATGAAGAT 58.793 43.478 0.00 0.00 0.00 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.089920 CGGGGAGAATTTGTCTGCAG 58.910 55.000 7.63 7.63 46.22 4.41
32 33 5.640158 ATATATTTTCTGTTGTCCGGGGA 57.360 39.130 0.00 0.00 0.00 4.81
35 36 7.342194 CACGTAATATATTTTCTGTTGTCCGG 58.658 38.462 2.68 0.00 0.00 5.14
104 105 5.505780 TGTCCCCTACCAGAAAATAACATG 58.494 41.667 0.00 0.00 0.00 3.21
117 118 4.838904 ACAGTATTTTCTGTCCCCTACC 57.161 45.455 0.00 0.00 44.07 3.18
120 121 7.147532 GGAGTATAACAGTATTTTCTGTCCCCT 60.148 40.741 0.00 0.00 46.25 4.79
124 125 6.200475 GCGGGAGTATAACAGTATTTTCTGTC 59.800 42.308 0.00 0.00 46.25 3.51
148 149 5.642491 AGAAAGACAAGTATTTAGGAACGGC 59.358 40.000 0.00 0.00 0.00 5.68
258 259 8.250332 ACTTGTCTTTCTAAGCATTTCAACAAA 58.750 29.630 0.00 0.00 0.00 2.83
271 272 8.587608 TCCGTTCCTAAATACTTGTCTTTCTAA 58.412 33.333 0.00 0.00 0.00 2.10
300 301 9.668497 GACCTAACATAAAATGTACTTCCTCTT 57.332 33.333 0.00 0.00 44.07 2.85
303 304 7.844009 TCGACCTAACATAAAATGTACTTCCT 58.156 34.615 0.00 0.00 44.07 3.36
304 305 8.483307 TTCGACCTAACATAAAATGTACTTCC 57.517 34.615 0.00 0.00 44.07 3.46
326 697 2.674796 AATCTCCGTCTCCCTTTTCG 57.325 50.000 0.00 0.00 0.00 3.46
347 718 3.234630 GACACTGGCTGCCGGTACA 62.235 63.158 31.34 3.96 41.86 2.90
353 724 2.493278 ACAAATATTGACACTGGCTGCC 59.507 45.455 12.87 12.87 0.00 4.85
447 825 0.692476 TCATGTGCAAGCCTACACCT 59.308 50.000 0.00 0.00 35.90 4.00
466 844 1.066430 ACGCTCGGTGGTGATTACATT 60.066 47.619 0.00 0.00 0.00 2.71
507 885 2.515901 GTGACTGGCCCACCACTT 59.484 61.111 0.00 0.00 42.67 3.16
537 932 1.741770 GCTCGTGTGACCCATCCAC 60.742 63.158 0.00 0.00 35.23 4.02
544 939 0.103208 CTGATAGGGCTCGTGTGACC 59.897 60.000 0.00 0.00 0.00 4.02
559 954 0.539051 GCTGTACTGGGCTGACTGAT 59.461 55.000 1.65 0.00 0.00 2.90
561 956 1.446792 CGCTGTACTGGGCTGACTG 60.447 63.158 3.90 0.00 0.00 3.51
563 958 2.125512 CCGCTGTACTGGGCTGAC 60.126 66.667 10.81 0.00 0.00 3.51
610 1018 1.127397 CGTACATGTGCTGCTCAAGTG 59.873 52.381 19.10 11.87 0.00 3.16
647 1055 2.483188 GGGGCGTCTATAGGTCAGTTTG 60.483 54.545 0.00 0.00 0.00 2.93
656 1064 2.484947 GGAAACAAGGGGGCGTCTATAG 60.485 54.545 0.00 0.00 0.00 1.31
724 1810 1.853250 GCCAAGTTAGGGGCCTGTCT 61.853 60.000 0.84 0.38 44.53 3.41
735 1830 1.353022 CCCTGGTAGGTTGCCAAGTTA 59.647 52.381 0.00 0.00 35.32 2.24
741 2308 2.996330 ATGGCCCTGGTAGGTTGCC 61.996 63.158 0.00 7.85 41.43 4.52
754 2321 3.443329 TGTGAACATATTGTGTCATGGCC 59.557 43.478 0.00 0.00 41.14 5.36
767 2334 1.346395 ACCCGCTTGTCTGTGAACATA 59.654 47.619 0.00 0.00 0.00 2.29
776 2343 1.466025 TACAACGGACCCGCTTGTCT 61.466 55.000 22.57 10.20 44.19 3.41
781 2348 1.515954 CATCTACAACGGACCCGCT 59.484 57.895 8.55 0.00 44.19 5.52
783 2350 1.143183 CCCATCTACAACGGACCCG 59.857 63.158 6.94 6.94 46.03 5.28
830 2430 3.498927 GCGGGTATATAGCGAGCTAAA 57.501 47.619 17.99 0.00 31.73 1.85
842 2442 1.067142 GCAGAATCCATCGCGGGTATA 60.067 52.381 6.13 0.00 34.36 1.47
843 2443 0.320771 GCAGAATCCATCGCGGGTAT 60.321 55.000 6.13 0.00 34.36 2.73
844 2444 1.069090 GCAGAATCCATCGCGGGTA 59.931 57.895 6.13 0.00 34.36 3.69
845 2445 2.203070 GCAGAATCCATCGCGGGT 60.203 61.111 6.13 0.00 34.36 5.28
846 2446 3.341043 CGCAGAATCCATCGCGGG 61.341 66.667 6.13 0.00 42.87 6.13
849 2449 1.083806 TGTCACGCAGAATCCATCGC 61.084 55.000 0.00 0.00 0.00 4.58
851 2451 1.061131 CGTTGTCACGCAGAATCCATC 59.939 52.381 0.00 0.00 40.18 3.51
852 2452 1.078709 CGTTGTCACGCAGAATCCAT 58.921 50.000 0.00 0.00 40.18 3.41
854 2454 0.438830 GTCGTTGTCACGCAGAATCC 59.561 55.000 0.00 0.00 46.70 3.01
895 2521 4.828296 GTGGCCCCTGCAGGATGG 62.828 72.222 34.91 27.00 40.13 3.51
911 2560 1.148949 GTGGGGTTTACGGTGTGGT 59.851 57.895 0.00 0.00 0.00 4.16
1017 4449 2.034305 CCGTTAATAGGAGGAGACGTGG 59.966 54.545 0.00 0.00 0.00 4.94
1037 4475 1.134521 TCTCTCTCTCTCTCTGACGCC 60.135 57.143 0.00 0.00 0.00 5.68
1046 4484 4.280677 CCTCTCTCTCTCTCTCTCTCTCTC 59.719 54.167 0.00 0.00 0.00 3.20
1048 4486 3.323403 CCCTCTCTCTCTCTCTCTCTCTC 59.677 56.522 0.00 0.00 0.00 3.20
1050 4488 3.309296 TCCCTCTCTCTCTCTCTCTCTC 58.691 54.545 0.00 0.00 0.00 3.20
1052 4490 2.370189 CCTCCCTCTCTCTCTCTCTCTC 59.630 59.091 0.00 0.00 0.00 3.20
1054 4492 1.421646 CCCTCCCTCTCTCTCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
1056 4494 1.421646 CTCCCTCCCTCTCTCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
1058 4496 1.421646 CTCTCCCTCCCTCTCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
1060 4498 1.421646 CTCTCTCCCTCCCTCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
1062 4500 1.421646 CTCTCTCTCCCTCCCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
1064 4502 1.421646 CTCTCTCTCTCCCTCCCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
1065 4503 1.010793 TCTCTCTCTCTCCCTCCCTCT 59.989 57.143 0.00 0.00 0.00 3.69
1066 4504 1.421646 CTCTCTCTCTCTCCCTCCCTC 59.578 61.905 0.00 0.00 0.00 4.30
1067 4505 1.010793 TCTCTCTCTCTCTCCCTCCCT 59.989 57.143 0.00 0.00 0.00 4.20
1068 4506 1.421646 CTCTCTCTCTCTCTCCCTCCC 59.578 61.905 0.00 0.00 0.00 4.30
1069 4507 2.370189 CTCTCTCTCTCTCTCTCCCTCC 59.630 59.091 0.00 0.00 0.00 4.30
1070 4508 3.309296 TCTCTCTCTCTCTCTCTCCCTC 58.691 54.545 0.00 0.00 0.00 4.30
1071 4509 3.051803 TCTCTCTCTCTCTCTCTCTCCCT 60.052 52.174 0.00 0.00 0.00 4.20
1072 4510 3.309296 TCTCTCTCTCTCTCTCTCTCCC 58.691 54.545 0.00 0.00 0.00 4.30
1073 4511 4.219115 TCTCTCTCTCTCTCTCTCTCTCC 58.781 52.174 0.00 0.00 0.00 3.71
1074 4512 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1106 4544 4.651503 TCTCTCCTTCTCTCTCTCTCTCTC 59.348 50.000 0.00 0.00 0.00 3.20
1107 4545 4.624913 TCTCTCCTTCTCTCTCTCTCTCT 58.375 47.826 0.00 0.00 0.00 3.10
1194 4647 1.136305 CGTCCCGTTGATGTAGGTGAT 59.864 52.381 0.00 0.00 0.00 3.06
1266 4722 0.613260 AATCTGCGGCAGTCCACTAA 59.387 50.000 27.63 8.75 32.61 2.24
1267 4723 0.175760 GAATCTGCGGCAGTCCACTA 59.824 55.000 27.63 9.49 32.61 2.74
1268 4724 1.078848 GAATCTGCGGCAGTCCACT 60.079 57.895 27.63 10.21 32.61 4.00
1980 7513 6.268158 GGGATTGGGTTTAAAGAAGGTTGTAA 59.732 38.462 0.00 0.00 0.00 2.41
2147 7681 8.087750 CGCACTACTTACTATACCTCTAGTAGT 58.912 40.741 0.00 0.00 45.37 2.73
2148 7682 8.303156 TCGCACTACTTACTATACCTCTAGTAG 58.697 40.741 0.00 0.00 40.37 2.57
2149 7683 8.183104 TCGCACTACTTACTATACCTCTAGTA 57.817 38.462 0.00 0.00 33.96 1.82
2150 7684 7.060383 TCGCACTACTTACTATACCTCTAGT 57.940 40.000 0.00 0.00 36.04 2.57
2151 7685 7.116662 CACTCGCACTACTTACTATACCTCTAG 59.883 44.444 0.00 0.00 0.00 2.43
2152 7686 6.927936 CACTCGCACTACTTACTATACCTCTA 59.072 42.308 0.00 0.00 0.00 2.43
2153 7687 5.759273 CACTCGCACTACTTACTATACCTCT 59.241 44.000 0.00 0.00 0.00 3.69
2154 7688 5.560567 GCACTCGCACTACTTACTATACCTC 60.561 48.000 0.00 0.00 38.36 3.85
2155 7689 4.275443 GCACTCGCACTACTTACTATACCT 59.725 45.833 0.00 0.00 38.36 3.08
2239 7774 0.027979 CAGGCCATAATTCGTGCGTG 59.972 55.000 5.01 0.00 33.95 5.34
2259 7794 5.699839 CCCCTTTACATCAAAATATAGCGC 58.300 41.667 0.00 0.00 0.00 5.92
2297 7833 0.937699 TTCGTGCGTCTTCGTCCTTG 60.938 55.000 0.00 0.00 39.49 3.61
2313 7849 1.134098 ACCCAGTCAGGCCATAATTCG 60.134 52.381 5.01 0.00 35.39 3.34
2324 7860 2.930950 TGGAAAAGACAACCCAGTCAG 58.069 47.619 0.00 0.00 40.98 3.51
2325 7861 3.287222 CTTGGAAAAGACAACCCAGTCA 58.713 45.455 0.00 0.00 40.98 3.41
2326 7862 3.288092 ACTTGGAAAAGACAACCCAGTC 58.712 45.455 0.00 0.00 38.81 3.51
2327 7863 3.382083 ACTTGGAAAAGACAACCCAGT 57.618 42.857 0.00 0.00 0.00 4.00
2338 7874 4.612264 AGTTACTCGGCTACTTGGAAAA 57.388 40.909 0.00 0.00 0.00 2.29
2351 7887 0.438830 GGCTTCGTGCAAGTTACTCG 59.561 55.000 0.00 0.00 45.15 4.18
2352 7888 1.508632 TGGCTTCGTGCAAGTTACTC 58.491 50.000 0.00 0.00 45.15 2.59
2353 7889 2.076863 GATGGCTTCGTGCAAGTTACT 58.923 47.619 0.00 0.00 45.15 2.24
2354 7890 1.804151 TGATGGCTTCGTGCAAGTTAC 59.196 47.619 0.00 0.00 45.15 2.50
2355 7891 1.804151 GTGATGGCTTCGTGCAAGTTA 59.196 47.619 0.00 0.00 45.15 2.24
2356 7892 0.593128 GTGATGGCTTCGTGCAAGTT 59.407 50.000 0.00 0.00 45.15 2.66
2357 7893 0.250467 AGTGATGGCTTCGTGCAAGT 60.250 50.000 0.00 0.00 45.15 3.16
2358 7894 0.877071 AAGTGATGGCTTCGTGCAAG 59.123 50.000 0.00 0.00 45.15 4.01
2359 7895 1.001487 CAAAGTGATGGCTTCGTGCAA 60.001 47.619 0.00 0.00 45.15 4.08
2360 7896 0.592637 CAAAGTGATGGCTTCGTGCA 59.407 50.000 5.65 0.00 45.15 4.57
2361 7897 0.874390 TCAAAGTGATGGCTTCGTGC 59.126 50.000 0.00 0.00 41.94 5.34
2362 7898 2.095567 CCTTCAAAGTGATGGCTTCGTG 60.096 50.000 0.00 0.00 35.35 4.35
2363 7899 2.154462 CCTTCAAAGTGATGGCTTCGT 58.846 47.619 0.00 0.00 35.35 3.85
2364 7900 2.907910 CCTTCAAAGTGATGGCTTCG 57.092 50.000 0.00 0.00 35.35 3.79
2369 7905 3.356529 ACCTAGCCTTCAAAGTGATGG 57.643 47.619 5.94 5.94 42.66 3.51
2370 7906 4.616835 GCAAACCTAGCCTTCAAAGTGATG 60.617 45.833 0.00 0.00 0.00 3.07
2371 7907 3.507622 GCAAACCTAGCCTTCAAAGTGAT 59.492 43.478 0.00 0.00 0.00 3.06
2372 7908 2.884639 GCAAACCTAGCCTTCAAAGTGA 59.115 45.455 0.00 0.00 0.00 3.41
2373 7909 2.622942 TGCAAACCTAGCCTTCAAAGTG 59.377 45.455 0.00 0.00 0.00 3.16
2374 7910 2.944129 TGCAAACCTAGCCTTCAAAGT 58.056 42.857 0.00 0.00 0.00 2.66
2375 7911 4.320608 TTTGCAAACCTAGCCTTCAAAG 57.679 40.909 8.05 0.00 0.00 2.77
2376 7912 4.744795 TTTTGCAAACCTAGCCTTCAAA 57.255 36.364 12.39 0.00 0.00 2.69
2377 7913 4.744795 TTTTTGCAAACCTAGCCTTCAA 57.255 36.364 12.39 0.00 0.00 2.69
2398 7934 9.448438 TCTGCAATAGAATTGTAACATAGTGTT 57.552 29.630 0.67 0.67 37.12 3.32
2399 7935 9.448438 TTCTGCAATAGAATTGTAACATAGTGT 57.552 29.630 1.94 0.00 40.43 3.55
2404 7940 9.410556 GTGTTTTCTGCAATAGAATTGTAACAT 57.589 29.630 7.49 0.00 44.54 2.71
2405 7941 7.865385 GGTGTTTTCTGCAATAGAATTGTAACA 59.135 33.333 1.94 0.00 44.54 2.41
2406 7942 7.865385 TGGTGTTTTCTGCAATAGAATTGTAAC 59.135 33.333 1.94 0.00 44.54 2.50
2407 7943 7.865385 GTGGTGTTTTCTGCAATAGAATTGTAA 59.135 33.333 1.94 0.00 44.54 2.41
2408 7944 7.367285 GTGGTGTTTTCTGCAATAGAATTGTA 58.633 34.615 1.94 0.00 44.54 2.41
2409 7945 6.215845 GTGGTGTTTTCTGCAATAGAATTGT 58.784 36.000 1.94 0.00 44.54 2.71
2410 7946 5.343058 CGTGGTGTTTTCTGCAATAGAATTG 59.657 40.000 0.00 0.00 44.54 2.32
2411 7947 5.009610 ACGTGGTGTTTTCTGCAATAGAATT 59.990 36.000 0.00 0.00 44.54 2.17
2412 7948 4.518970 ACGTGGTGTTTTCTGCAATAGAAT 59.481 37.500 0.00 0.00 44.54 2.40
2413 7949 3.880490 ACGTGGTGTTTTCTGCAATAGAA 59.120 39.130 0.00 0.00 43.53 2.10
2414 7950 3.472652 ACGTGGTGTTTTCTGCAATAGA 58.527 40.909 0.00 0.00 0.00 1.98
2415 7951 3.498397 AGACGTGGTGTTTTCTGCAATAG 59.502 43.478 0.00 0.00 0.00 1.73
2416 7952 3.472652 AGACGTGGTGTTTTCTGCAATA 58.527 40.909 0.00 0.00 0.00 1.90
2417 7953 2.297701 AGACGTGGTGTTTTCTGCAAT 58.702 42.857 0.00 0.00 0.00 3.56
2418 7954 1.745232 AGACGTGGTGTTTTCTGCAA 58.255 45.000 0.00 0.00 0.00 4.08
2419 7955 1.400142 CAAGACGTGGTGTTTTCTGCA 59.600 47.619 0.00 0.00 0.00 4.41
2420 7956 1.400494 ACAAGACGTGGTGTTTTCTGC 59.600 47.619 0.00 0.00 0.00 4.26
2421 7957 3.051606 CACAAGACGTGGTGTTTTCTG 57.948 47.619 0.00 0.00 42.34 3.02
2432 7968 5.431420 TGCAAAATGATTACACAAGACGT 57.569 34.783 0.00 0.00 0.00 4.34
2433 7969 6.746104 TTTGCAAAATGATTACACAAGACG 57.254 33.333 10.02 0.00 0.00 4.18
2434 7970 7.065283 GCTTTTGCAAAATGATTACACAAGAC 58.935 34.615 24.06 2.36 46.58 3.01
2435 7971 7.176285 GCTTTTGCAAAATGATTACACAAGA 57.824 32.000 24.06 0.00 46.58 3.02
2459 7995 2.069273 GTCTAATCCGCCGATCAATGG 58.931 52.381 0.00 0.00 0.00 3.16
2460 7996 2.989840 GAGTCTAATCCGCCGATCAATG 59.010 50.000 0.00 0.00 0.00 2.82
2461 7997 2.351835 CGAGTCTAATCCGCCGATCAAT 60.352 50.000 0.00 0.00 0.00 2.57
2462 7998 1.001706 CGAGTCTAATCCGCCGATCAA 60.002 52.381 0.00 0.00 0.00 2.57
2463 7999 0.591659 CGAGTCTAATCCGCCGATCA 59.408 55.000 0.00 0.00 0.00 2.92
2464 8000 0.592148 ACGAGTCTAATCCGCCGATC 59.408 55.000 0.00 0.00 0.00 3.69
2465 8001 1.030457 AACGAGTCTAATCCGCCGAT 58.970 50.000 0.00 0.00 0.00 4.18
2466 8002 0.813184 AAACGAGTCTAATCCGCCGA 59.187 50.000 0.00 0.00 0.00 5.54
2467 8003 0.921347 CAAACGAGTCTAATCCGCCG 59.079 55.000 0.00 0.00 0.00 6.46
2468 8004 2.194271 CTCAAACGAGTCTAATCCGCC 58.806 52.381 0.00 0.00 0.00 6.13
2469 8005 1.588861 GCTCAAACGAGTCTAATCCGC 59.411 52.381 0.00 0.00 32.72 5.54
2470 8006 1.846782 CGCTCAAACGAGTCTAATCCG 59.153 52.381 0.00 0.00 34.06 4.18
2471 8007 2.599082 CACGCTCAAACGAGTCTAATCC 59.401 50.000 0.00 0.00 36.70 3.01
2472 8008 3.243336 ACACGCTCAAACGAGTCTAATC 58.757 45.455 0.00 0.00 30.99 1.75
2473 8009 3.299340 ACACGCTCAAACGAGTCTAAT 57.701 42.857 0.00 0.00 30.99 1.73
2474 8010 2.787601 ACACGCTCAAACGAGTCTAA 57.212 45.000 0.00 0.00 30.99 2.10
2475 8011 2.787601 AACACGCTCAAACGAGTCTA 57.212 45.000 0.00 0.00 35.80 2.59
2476 8012 1.935933 AAACACGCTCAAACGAGTCT 58.064 45.000 0.00 0.00 35.80 3.24
2477 8013 3.427528 TCATAAACACGCTCAAACGAGTC 59.572 43.478 0.00 0.00 35.80 3.36
2478 8014 3.183775 GTCATAAACACGCTCAAACGAGT 59.816 43.478 0.00 0.00 38.52 4.18
2479 8015 3.183574 TGTCATAAACACGCTCAAACGAG 59.816 43.478 0.00 0.00 36.70 4.18
2480 8016 3.124560 TGTCATAAACACGCTCAAACGA 58.875 40.909 0.00 0.00 36.70 3.85
2481 8017 3.469629 CTGTCATAAACACGCTCAAACG 58.530 45.455 0.00 0.00 39.50 3.60
2482 8018 3.250040 ACCTGTCATAAACACGCTCAAAC 59.750 43.478 0.00 0.00 33.24 2.93
2483 8019 3.249799 CACCTGTCATAAACACGCTCAAA 59.750 43.478 0.00 0.00 33.24 2.69
2484 8020 2.805671 CACCTGTCATAAACACGCTCAA 59.194 45.455 0.00 0.00 33.24 3.02
2485 8021 2.036604 TCACCTGTCATAAACACGCTCA 59.963 45.455 0.00 0.00 33.24 4.26
2486 8022 2.668457 CTCACCTGTCATAAACACGCTC 59.332 50.000 0.00 0.00 33.24 5.03
2487 8023 2.037251 ACTCACCTGTCATAAACACGCT 59.963 45.455 0.00 0.00 33.24 5.07
2488 8024 2.412089 GACTCACCTGTCATAAACACGC 59.588 50.000 0.00 0.00 36.97 5.34
2489 8025 2.993899 GGACTCACCTGTCATAAACACG 59.006 50.000 0.00 0.00 38.61 4.49
2490 8026 3.244422 TGGGACTCACCTGTCATAAACAC 60.244 47.826 0.00 0.00 38.61 3.32
2491 8027 2.976185 TGGGACTCACCTGTCATAAACA 59.024 45.455 0.00 0.00 38.61 2.83
2492 8028 3.335579 GTGGGACTCACCTGTCATAAAC 58.664 50.000 0.00 0.00 40.39 2.01
2503 8039 2.033424 GTCAGCAAAAAGTGGGACTCAC 59.967 50.000 0.00 0.00 46.39 3.51
2504 8040 2.297701 GTCAGCAAAAAGTGGGACTCA 58.702 47.619 0.00 0.00 0.00 3.41
2507 8043 1.021968 ACGTCAGCAAAAAGTGGGAC 58.978 50.000 0.00 0.00 0.00 4.46
2510 8046 3.549997 CCACGTCAGCAAAAAGTGG 57.450 52.632 0.00 0.00 45.01 4.00
2512 8048 1.032014 ATGCCACGTCAGCAAAAAGT 58.968 45.000 13.34 0.00 44.83 2.66
2514 8050 3.573598 CATTATGCCACGTCAGCAAAAA 58.426 40.909 13.34 11.04 44.83 1.94
2522 8058 2.097466 CCTCAAACCATTATGCCACGTC 59.903 50.000 0.00 0.00 0.00 4.34
2523 8059 2.091541 CCTCAAACCATTATGCCACGT 58.908 47.619 0.00 0.00 0.00 4.49
2524 8060 2.364632 TCCTCAAACCATTATGCCACG 58.635 47.619 0.00 0.00 0.00 4.94
2525 8061 3.953612 TCATCCTCAAACCATTATGCCAC 59.046 43.478 0.00 0.00 0.00 5.01
2526 8062 3.953612 GTCATCCTCAAACCATTATGCCA 59.046 43.478 0.00 0.00 0.00 4.92
2527 8063 3.003689 CGTCATCCTCAAACCATTATGCC 59.996 47.826 0.00 0.00 0.00 4.40
2529 8065 3.003689 GCCGTCATCCTCAAACCATTATG 59.996 47.826 0.00 0.00 0.00 1.90
2531 8067 2.639065 GCCGTCATCCTCAAACCATTA 58.361 47.619 0.00 0.00 0.00 1.90
2532 8068 1.463674 GCCGTCATCCTCAAACCATT 58.536 50.000 0.00 0.00 0.00 3.16
2533 8069 0.744414 CGCCGTCATCCTCAAACCAT 60.744 55.000 0.00 0.00 0.00 3.55
2534 8070 1.375396 CGCCGTCATCCTCAAACCA 60.375 57.895 0.00 0.00 0.00 3.67
2535 8071 0.953960 AACGCCGTCATCCTCAAACC 60.954 55.000 0.00 0.00 0.00 3.27
2536 8072 1.717194 TAACGCCGTCATCCTCAAAC 58.283 50.000 0.00 0.00 0.00 2.93
2538 8074 2.459060 TTTAACGCCGTCATCCTCAA 57.541 45.000 0.00 0.00 0.00 3.02
2540 8076 2.540101 CTCATTTAACGCCGTCATCCTC 59.460 50.000 0.00 0.00 0.00 3.71
2541 8077 2.093658 ACTCATTTAACGCCGTCATCCT 60.094 45.455 0.00 0.00 0.00 3.24
2542 8078 2.277084 ACTCATTTAACGCCGTCATCC 58.723 47.619 0.00 0.00 0.00 3.51
2543 8079 4.336532 AAACTCATTTAACGCCGTCATC 57.663 40.909 0.00 0.00 0.00 2.92
2547 8083 6.670233 TGATTTAAAACTCATTTAACGCCGT 58.330 32.000 0.00 0.00 41.87 5.68
2572 8108 2.047061 GAAGAAGGTTGGGGGCTTTTT 58.953 47.619 0.00 0.00 0.00 1.94
2573 8109 1.717032 GAAGAAGGTTGGGGGCTTTT 58.283 50.000 0.00 0.00 0.00 2.27
2575 8111 1.074296 AGGAAGAAGGTTGGGGGCTT 61.074 55.000 0.00 0.00 0.00 4.35
2576 8112 1.466186 AGGAAGAAGGTTGGGGGCT 60.466 57.895 0.00 0.00 0.00 5.19
2578 8114 1.384191 CCAGGAAGAAGGTTGGGGG 59.616 63.158 0.00 0.00 0.00 5.40
2579 8115 0.251341 CACCAGGAAGAAGGTTGGGG 60.251 60.000 0.00 0.00 35.52 4.96
2580 8116 0.895559 GCACCAGGAAGAAGGTTGGG 60.896 60.000 0.00 0.00 35.52 4.12
2581 8117 0.895559 GGCACCAGGAAGAAGGTTGG 60.896 60.000 0.00 0.00 35.52 3.77
2582 8118 2.646121 GGCACCAGGAAGAAGGTTG 58.354 57.895 0.00 0.00 35.52 3.77
2615 8151 1.738099 CTCCGGCCAACTCACGAAG 60.738 63.158 2.24 0.00 0.00 3.79
2616 8152 2.204461 TCTCCGGCCAACTCACGAA 61.204 57.895 2.24 0.00 0.00 3.85
2617 8153 2.599281 TCTCCGGCCAACTCACGA 60.599 61.111 2.24 0.00 0.00 4.35
2618 8154 2.432628 GTCTCCGGCCAACTCACG 60.433 66.667 2.24 0.00 0.00 4.35
2619 8155 1.668151 GTGTCTCCGGCCAACTCAC 60.668 63.158 2.24 1.24 0.00 3.51
2620 8156 2.741092 GTGTCTCCGGCCAACTCA 59.259 61.111 2.24 0.00 0.00 3.41
2621 8157 2.047179 GGTGTCTCCGGCCAACTC 60.047 66.667 2.24 0.00 0.00 3.01
2664 8200 2.125106 GATGGTGTCTCCGGCCAC 60.125 66.667 2.24 3.10 39.52 5.01
2665 8201 3.399181 GGATGGTGTCTCCGGCCA 61.399 66.667 2.24 0.00 39.52 5.36
2666 8202 4.176752 GGGATGGTGTCTCCGGCC 62.177 72.222 0.00 0.00 39.52 6.13
2667 8203 3.083997 AGGGATGGTGTCTCCGGC 61.084 66.667 0.00 0.00 39.52 6.13
2668 8204 2.903357 CAGGGATGGTGTCTCCGG 59.097 66.667 0.00 0.00 39.52 5.14
2669 8205 2.187946 GCAGGGATGGTGTCTCCG 59.812 66.667 0.00 0.00 39.52 4.63
2670 8206 1.222936 CAGCAGGGATGGTGTCTCC 59.777 63.158 0.00 0.00 33.12 3.71
2671 8207 1.451028 GCAGCAGGGATGGTGTCTC 60.451 63.158 8.97 0.00 39.28 3.36
2672 8208 1.569030 ATGCAGCAGGGATGGTGTCT 61.569 55.000 0.00 0.00 39.28 3.41
2673 8209 0.181114 TATGCAGCAGGGATGGTGTC 59.819 55.000 0.00 3.00 39.28 3.67
2674 8210 0.625316 TTATGCAGCAGGGATGGTGT 59.375 50.000 0.00 0.00 39.28 4.16
2675 8211 1.991121 ATTATGCAGCAGGGATGGTG 58.009 50.000 0.00 3.18 39.98 4.17
2676 8212 2.313317 CAATTATGCAGCAGGGATGGT 58.687 47.619 0.00 0.00 0.00 3.55
2677 8213 1.616865 CCAATTATGCAGCAGGGATGG 59.383 52.381 0.00 3.45 0.00 3.51
2678 8214 1.616865 CCCAATTATGCAGCAGGGATG 59.383 52.381 10.64 2.87 38.60 3.51
2679 8215 2.005370 CCCAATTATGCAGCAGGGAT 57.995 50.000 10.64 0.00 38.60 3.85
2680 8216 0.756442 GCCCAATTATGCAGCAGGGA 60.756 55.000 18.84 0.00 38.60 4.20
2681 8217 1.044231 TGCCCAATTATGCAGCAGGG 61.044 55.000 11.64 11.64 39.33 4.45
2682 8218 0.825410 TTGCCCAATTATGCAGCAGG 59.175 50.000 0.00 0.00 38.95 4.85
2683 8219 2.273557 GTTTGCCCAATTATGCAGCAG 58.726 47.619 0.00 0.00 38.95 4.24
2684 8220 1.066286 GGTTTGCCCAATTATGCAGCA 60.066 47.619 0.00 0.00 38.95 4.41
2685 8221 1.066286 TGGTTTGCCCAATTATGCAGC 60.066 47.619 0.00 0.00 41.50 5.25
2686 8222 2.896168 CTGGTTTGCCCAATTATGCAG 58.104 47.619 0.00 0.00 44.65 4.41
2687 8223 1.066286 GCTGGTTTGCCCAATTATGCA 60.066 47.619 0.00 0.00 44.65 3.96
2688 8224 1.207811 AGCTGGTTTGCCCAATTATGC 59.792 47.619 0.00 0.00 44.65 3.14
2689 8225 2.896168 CAGCTGGTTTGCCCAATTATG 58.104 47.619 5.57 0.00 44.65 1.90
2690 8226 1.207811 GCAGCTGGTTTGCCCAATTAT 59.792 47.619 17.12 0.00 44.65 1.28
2691 8227 0.607620 GCAGCTGGTTTGCCCAATTA 59.392 50.000 17.12 0.00 44.65 1.40
2692 8228 1.123246 AGCAGCTGGTTTGCCCAATT 61.123 50.000 13.85 0.00 44.65 2.32
2693 8229 1.534717 AGCAGCTGGTTTGCCCAAT 60.535 52.632 13.85 0.00 44.65 3.16
2694 8230 2.123338 AGCAGCTGGTTTGCCCAA 60.123 55.556 13.85 0.00 44.65 4.12
2695 8231 2.598394 GAGCAGCTGGTTTGCCCA 60.598 61.111 21.18 0.00 42.48 5.36
2696 8232 3.376918 GGAGCAGCTGGTTTGCCC 61.377 66.667 21.18 12.73 42.48 5.36
2697 8233 3.376918 GGGAGCAGCTGGTTTGCC 61.377 66.667 21.18 16.27 42.48 4.52
2698 8234 1.941999 GATGGGAGCAGCTGGTTTGC 61.942 60.000 21.18 7.23 41.83 3.68
2699 8235 1.318158 GGATGGGAGCAGCTGGTTTG 61.318 60.000 21.18 0.00 0.00 2.93
2700 8236 1.000396 GGATGGGAGCAGCTGGTTT 60.000 57.895 21.18 5.60 0.00 3.27
2701 8237 2.679716 GGATGGGAGCAGCTGGTT 59.320 61.111 21.18 3.24 0.00 3.67
2702 8238 3.790437 CGGATGGGAGCAGCTGGT 61.790 66.667 20.31 20.31 0.00 4.00
2703 8239 3.457625 CTCGGATGGGAGCAGCTGG 62.458 68.421 17.12 0.00 0.00 4.85
2704 8240 2.108566 CTCGGATGGGAGCAGCTG 59.891 66.667 10.11 10.11 0.00 4.24
2705 8241 3.160047 CCTCGGATGGGAGCAGCT 61.160 66.667 0.00 0.00 32.57 4.24
2706 8242 3.157252 TCCTCGGATGGGAGCAGC 61.157 66.667 0.00 0.00 32.57 5.25
2707 8243 3.136750 CTCCTCGGATGGGAGCAG 58.863 66.667 0.84 0.00 42.95 4.24
2711 8247 3.157252 GCTGCTCCTCGGATGGGA 61.157 66.667 0.00 0.00 0.00 4.37
2712 8248 4.247380 GGCTGCTCCTCGGATGGG 62.247 72.222 0.00 0.00 0.00 4.00
2713 8249 2.657102 GAAGGCTGCTCCTCGGATGG 62.657 65.000 0.00 0.00 46.94 3.51
2714 8250 1.227497 GAAGGCTGCTCCTCGGATG 60.227 63.158 0.00 0.00 46.94 3.51
2715 8251 2.439104 GGAAGGCTGCTCCTCGGAT 61.439 63.158 0.00 0.00 46.94 4.18
2716 8252 3.077556 GGAAGGCTGCTCCTCGGA 61.078 66.667 0.00 0.00 46.94 4.55
2717 8253 4.521062 CGGAAGGCTGCTCCTCGG 62.521 72.222 0.00 0.00 46.94 4.63
2736 8272 1.153005 GAAGGGGAGCTCCAGCATG 60.153 63.158 33.29 0.00 45.16 4.06
2737 8273 2.381941 GGAAGGGGAGCTCCAGCAT 61.382 63.158 33.29 16.48 45.16 3.79
2738 8274 3.011517 GGAAGGGGAGCTCCAGCA 61.012 66.667 33.29 0.00 45.16 4.41
2739 8275 4.168291 CGGAAGGGGAGCTCCAGC 62.168 72.222 33.29 17.35 42.49 4.85
2740 8276 4.168291 GCGGAAGGGGAGCTCCAG 62.168 72.222 33.29 17.04 37.91 3.86
2744 8280 3.714078 TATGGGCGGAAGGGGAGCT 62.714 63.158 0.00 0.00 0.00 4.09
2745 8281 3.168528 TATGGGCGGAAGGGGAGC 61.169 66.667 0.00 0.00 0.00 4.70
2746 8282 3.151906 CTATGGGCGGAAGGGGAG 58.848 66.667 0.00 0.00 0.00 4.30
2747 8283 3.168528 GCTATGGGCGGAAGGGGA 61.169 66.667 0.00 0.00 0.00 4.81
2748 8284 4.271016 GGCTATGGGCGGAAGGGG 62.271 72.222 0.00 0.00 42.94 4.79
2770 8306 4.722700 AGATGCCACACCGCCCAC 62.723 66.667 0.00 0.00 0.00 4.61
2771 8307 4.408821 GAGATGCCACACCGCCCA 62.409 66.667 0.00 0.00 0.00 5.36
2773 8309 4.451150 TCGAGATGCCACACCGCC 62.451 66.667 0.00 0.00 0.00 6.13
2774 8310 2.887568 CTCGAGATGCCACACCGC 60.888 66.667 6.58 0.00 0.00 5.68
2775 8311 2.887568 GCTCGAGATGCCACACCG 60.888 66.667 18.75 0.00 0.00 4.94
2776 8312 2.887568 CGCTCGAGATGCCACACC 60.888 66.667 18.75 0.00 0.00 4.16
2777 8313 3.558411 GCGCTCGAGATGCCACAC 61.558 66.667 18.75 0.00 0.00 3.82
2807 8343 1.676746 CTCCATCATGGCAGAAGGTG 58.323 55.000 0.00 0.00 37.47 4.00
2808 8344 0.106819 GCTCCATCATGGCAGAAGGT 60.107 55.000 0.00 0.00 37.47 3.50
2809 8345 0.183014 AGCTCCATCATGGCAGAAGG 59.817 55.000 0.00 0.00 37.47 3.46
2810 8346 1.595466 GAGCTCCATCATGGCAGAAG 58.405 55.000 0.87 0.00 37.47 2.85
2811 8347 0.182061 GGAGCTCCATCATGGCAGAA 59.818 55.000 28.43 0.00 37.47 3.02
2812 8348 1.703014 GGGAGCTCCATCATGGCAGA 61.703 60.000 33.29 0.00 37.47 4.26
2813 8349 1.228184 GGGAGCTCCATCATGGCAG 60.228 63.158 33.29 0.00 37.47 4.85
2814 8350 1.695239 AGGGAGCTCCATCATGGCA 60.695 57.895 33.29 0.00 37.47 4.92
2815 8351 1.228184 CAGGGAGCTCCATCATGGC 60.228 63.158 33.29 14.58 37.47 4.40
2816 8352 1.065647 ATCAGGGAGCTCCATCATGG 58.934 55.000 33.29 15.29 39.43 3.66
2817 8353 1.271434 CCATCAGGGAGCTCCATCATG 60.271 57.143 33.29 28.01 40.01 3.07
2818 8354 1.065647 CCATCAGGGAGCTCCATCAT 58.934 55.000 33.29 17.66 40.01 2.45
2819 8355 0.030807 TCCATCAGGGAGCTCCATCA 60.031 55.000 33.29 15.73 42.15 3.07
2820 8356 2.845797 TCCATCAGGGAGCTCCATC 58.154 57.895 33.29 17.60 42.15 3.51
2828 8364 0.325671 GTCCAGGACTCCATCAGGGA 60.326 60.000 12.94 0.00 45.89 4.20
2829 8365 0.326048 AGTCCAGGACTCCATCAGGG 60.326 60.000 17.31 0.00 38.71 4.45
2830 8366 2.461300 TAGTCCAGGACTCCATCAGG 57.539 55.000 26.42 0.00 42.40 3.86
2831 8367 2.697751 CCTTAGTCCAGGACTCCATCAG 59.302 54.545 26.42 13.98 42.40 2.90
2832 8368 2.626950 CCCTTAGTCCAGGACTCCATCA 60.627 54.545 26.42 5.02 42.40 3.07
2833 8369 2.043227 CCCTTAGTCCAGGACTCCATC 58.957 57.143 26.42 0.00 42.40 3.51
2834 8370 1.344496 CCCCTTAGTCCAGGACTCCAT 60.344 57.143 26.42 4.72 42.40 3.41
2835 8371 0.042731 CCCCTTAGTCCAGGACTCCA 59.957 60.000 26.42 12.91 42.40 3.86
2836 8372 0.042881 ACCCCTTAGTCCAGGACTCC 59.957 60.000 26.42 0.00 42.40 3.85
2837 8373 1.487300 GACCCCTTAGTCCAGGACTC 58.513 60.000 26.42 6.18 42.40 3.36
2838 8374 3.713867 GACCCCTTAGTCCAGGACT 57.286 57.895 25.92 25.92 45.54 3.85
2845 8381 0.324091 TGTCCGAGGACCCCTTAGTC 60.324 60.000 18.57 0.00 43.97 2.59
2846 8382 0.324460 CTGTCCGAGGACCCCTTAGT 60.324 60.000 18.57 0.00 43.97 2.24
2847 8383 1.677637 GCTGTCCGAGGACCCCTTAG 61.678 65.000 18.57 10.32 43.97 2.18
2848 8384 1.684734 GCTGTCCGAGGACCCCTTA 60.685 63.158 18.57 0.00 43.97 2.69
2849 8385 3.003763 GCTGTCCGAGGACCCCTT 61.004 66.667 18.57 0.00 43.97 3.95
2850 8386 3.999285 AGCTGTCCGAGGACCCCT 61.999 66.667 18.57 11.81 43.97 4.79
2851 8387 3.775654 CAGCTGTCCGAGGACCCC 61.776 72.222 18.57 9.87 43.97 4.95
2852 8388 2.283529 TTCAGCTGTCCGAGGACCC 61.284 63.158 18.57 10.20 43.97 4.46
2853 8389 1.079750 GTTCAGCTGTCCGAGGACC 60.080 63.158 18.57 5.25 43.97 4.46
2854 8390 1.174783 TAGTTCAGCTGTCCGAGGAC 58.825 55.000 14.67 14.98 44.77 3.85
2855 8391 2.145397 ATAGTTCAGCTGTCCGAGGA 57.855 50.000 14.67 0.00 0.00 3.71
2856 8392 4.519350 TGTATATAGTTCAGCTGTCCGAGG 59.481 45.833 14.67 0.00 0.00 4.63
2857 8393 5.690997 TGTATATAGTTCAGCTGTCCGAG 57.309 43.478 14.67 0.00 0.00 4.63
2858 8394 6.447162 CAATGTATATAGTTCAGCTGTCCGA 58.553 40.000 14.67 2.13 0.00 4.55
2859 8395 5.635280 CCAATGTATATAGTTCAGCTGTCCG 59.365 44.000 14.67 0.00 0.00 4.79
2860 8396 5.409826 GCCAATGTATATAGTTCAGCTGTCC 59.590 44.000 14.67 5.42 0.00 4.02
2861 8397 5.409826 GGCCAATGTATATAGTTCAGCTGTC 59.590 44.000 14.67 8.51 0.00 3.51
2862 8398 5.308825 GGCCAATGTATATAGTTCAGCTGT 58.691 41.667 14.67 0.00 0.00 4.40
2863 8399 4.389992 CGGCCAATGTATATAGTTCAGCTG 59.610 45.833 7.63 7.63 0.00 4.24
2864 8400 4.563580 CCGGCCAATGTATATAGTTCAGCT 60.564 45.833 2.24 0.00 0.00 4.24
2865 8401 3.684788 CCGGCCAATGTATATAGTTCAGC 59.315 47.826 2.24 0.00 0.00 4.26
2866 8402 5.147330 TCCGGCCAATGTATATAGTTCAG 57.853 43.478 2.24 0.00 0.00 3.02
2867 8403 5.755409 ATCCGGCCAATGTATATAGTTCA 57.245 39.130 2.24 0.00 0.00 3.18
2868 8404 5.938125 ACAATCCGGCCAATGTATATAGTTC 59.062 40.000 2.24 0.00 0.00 3.01
2869 8405 5.876357 ACAATCCGGCCAATGTATATAGTT 58.124 37.500 2.24 0.00 0.00 2.24
2870 8406 5.499004 ACAATCCGGCCAATGTATATAGT 57.501 39.130 2.24 0.00 0.00 2.12
2871 8407 5.123820 CCAACAATCCGGCCAATGTATATAG 59.876 44.000 2.24 0.00 0.00 1.31
2872 8408 5.007034 CCAACAATCCGGCCAATGTATATA 58.993 41.667 2.24 0.00 0.00 0.86
2873 8409 3.826157 CCAACAATCCGGCCAATGTATAT 59.174 43.478 2.24 0.00 0.00 0.86
2874 8410 3.218453 CCAACAATCCGGCCAATGTATA 58.782 45.455 2.24 0.00 0.00 1.47
2875 8411 2.031120 CCAACAATCCGGCCAATGTAT 58.969 47.619 2.24 0.00 0.00 2.29
2876 8412 1.468985 CCAACAATCCGGCCAATGTA 58.531 50.000 2.24 0.00 0.00 2.29
2877 8413 1.257055 CCCAACAATCCGGCCAATGT 61.257 55.000 2.24 0.00 0.00 2.71
2878 8414 1.257055 ACCCAACAATCCGGCCAATG 61.257 55.000 2.24 0.00 0.00 2.82
2879 8415 0.544120 AACCCAACAATCCGGCCAAT 60.544 50.000 2.24 0.00 0.00 3.16
2880 8416 0.112606 TAACCCAACAATCCGGCCAA 59.887 50.000 2.24 0.00 0.00 4.52
2881 8417 0.333312 ATAACCCAACAATCCGGCCA 59.667 50.000 2.24 0.00 0.00 5.36
2882 8418 0.744281 CATAACCCAACAATCCGGCC 59.256 55.000 0.00 0.00 0.00 6.13
2883 8419 1.757682 TCATAACCCAACAATCCGGC 58.242 50.000 0.00 0.00 0.00 6.13
2884 8420 3.616219 TCTTCATAACCCAACAATCCGG 58.384 45.455 0.00 0.00 0.00 5.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.