Multiple sequence alignment - TraesCS3B01G118300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G118300 chr3B 100.000 3596 0 0 1 3596 85094885 85091290 0.000000e+00 6641.0
1 TraesCS3B01G118300 chr3B 91.837 196 9 2 3327 3521 662522304 662522493 2.130000e-67 267.0
2 TraesCS3B01G118300 chr3B 93.143 175 10 2 1 174 29709489 29709662 4.610000e-64 255.0
3 TraesCS3B01G118300 chr3B 95.652 69 3 0 3329 3397 123672758 123672690 1.060000e-20 111.0
4 TraesCS3B01G118300 chr3A 91.952 2510 112 35 877 3325 65466513 65468993 0.000000e+00 3434.0
5 TraesCS3B01G118300 chr3A 91.593 226 18 1 472 696 697692883 697692658 9.690000e-81 311.0
6 TraesCS3B01G118300 chr3A 92.571 175 11 2 1 174 497712505 497712678 2.140000e-62 250.0
7 TraesCS3B01G118300 chr3D 93.858 2263 89 14 875 3103 54831569 54829323 0.000000e+00 3363.0
8 TraesCS3B01G118300 chr3D 88.445 2129 190 30 687 2781 54986226 54984120 0.000000e+00 2518.0
9 TraesCS3B01G118300 chr3D 91.928 223 18 0 472 694 562632689 562632911 2.700000e-81 313.0
10 TraesCS3B01G118300 chr3D 92.523 107 8 0 3219 3325 54819251 54819145 1.730000e-33 154.0
11 TraesCS3B01G118300 chr3D 89.908 109 11 0 1807 1915 55753589 55753697 1.350000e-29 141.0
12 TraesCS3B01G118300 chr3D 89.474 95 8 1 779 871 54831698 54831604 6.310000e-23 119.0
13 TraesCS3B01G118300 chr3D 90.625 64 6 0 3225 3288 55749817 55749880 6.400000e-13 86.1
14 TraesCS3B01G118300 chr4D 95.810 525 20 2 176 698 455258311 455257787 0.000000e+00 846.0
15 TraesCS3B01G118300 chr4D 84.855 482 58 8 1031 1512 477911977 477912443 4.200000e-129 472.0
16 TraesCS3B01G118300 chr4D 93.213 221 14 1 472 691 95673977 95673757 1.250000e-84 324.0
17 TraesCS3B01G118300 chr6D 83.227 942 128 13 1631 2562 420568464 420567543 0.000000e+00 837.0
18 TraesCS3B01G118300 chr6D 82.581 953 143 13 1611 2562 430402540 430403470 0.000000e+00 819.0
19 TraesCS3B01G118300 chr6D 82.678 941 136 16 1631 2562 420559948 420560870 0.000000e+00 809.0
20 TraesCS3B01G118300 chr6D 84.802 658 95 4 1868 2524 430322530 430323183 0.000000e+00 656.0
21 TraesCS3B01G118300 chr6D 86.024 508 57 7 1028 1531 420559294 420559791 1.900000e-147 532.0
22 TraesCS3B01G118300 chr6D 85.941 505 57 7 1031 1531 408157048 408156554 8.840000e-146 527.0
23 TraesCS3B01G118300 chr6D 85.465 516 57 10 1031 1539 420569120 420568616 4.110000e-144 521.0
24 TraesCS3B01G118300 chr6D 94.194 310 15 2 383 690 97559582 97559890 1.510000e-128 470.0
25 TraesCS3B01G118300 chr6D 94.286 35 1 1 442 475 307516368 307516334 6.000000e-03 52.8
26 TraesCS3B01G118300 chr7B 95.437 526 21 3 176 699 145928841 145928317 0.000000e+00 835.0
27 TraesCS3B01G118300 chr7B 95.728 515 20 1 176 688 4604767 4605281 0.000000e+00 828.0
28 TraesCS3B01G118300 chr7B 90.769 195 10 2 3328 3521 507142017 507142204 1.660000e-63 254.0
29 TraesCS3B01G118300 chr6A 83.121 942 132 14 1631 2563 563485460 563486383 0.000000e+00 833.0
30 TraesCS3B01G118300 chr6A 82.195 893 132 19 1673 2562 576913844 576914712 0.000000e+00 743.0
31 TraesCS3B01G118300 chr6A 94.286 35 1 1 442 475 444673445 444673411 6.000000e-03 52.8
32 TraesCS3B01G118300 chr5B 95.745 517 20 1 176 690 504044386 504044902 0.000000e+00 832.0
33 TraesCS3B01G118300 chr5B 92.655 177 11 2 1 176 609726970 609726795 1.660000e-63 254.0
34 TraesCS3B01G118300 chr5B 88.325 197 14 4 3329 3524 97893779 97893591 1.000000e-55 228.0
35 TraesCS3B01G118300 chr6B 95.560 518 21 1 176 691 27633569 27633052 0.000000e+00 828.0
36 TraesCS3B01G118300 chr6B 82.609 943 135 16 1631 2563 612744517 612743594 0.000000e+00 806.0
37 TraesCS3B01G118300 chr6B 82.484 942 138 13 1631 2563 633731363 633732286 0.000000e+00 800.0
38 TraesCS3B01G118300 chr6B 82.278 948 141 17 1618 2562 648695995 648696918 0.000000e+00 795.0
39 TraesCS3B01G118300 chr6B 85.996 507 59 5 1028 1531 633730712 633731209 1.900000e-147 532.0
40 TraesCS3B01G118300 chr6B 84.752 505 63 7 1031 1531 612745114 612744620 8.970000e-136 494.0
41 TraesCS3B01G118300 chr6B 76.853 877 142 34 1646 2518 16241437 16242256 4.260000e-119 438.0
42 TraesCS3B01G118300 chr6B 93.103 174 10 2 2 174 66742301 66742473 1.660000e-63 254.0
43 TraesCS3B01G118300 chr6B 92.614 176 10 3 1 174 49344078 49344252 2.140000e-62 250.0
44 TraesCS3B01G118300 chr4B 82.807 919 131 16 1629 2541 604139827 604140724 0.000000e+00 797.0
45 TraesCS3B01G118300 chr4B 89.691 194 12 2 3329 3521 230257715 230257901 1.290000e-59 241.0
46 TraesCS3B01G118300 chr2D 95.568 361 14 1 176 534 274923976 274924336 8.660000e-161 577.0
47 TraesCS3B01G118300 chr2D 87.075 294 20 3 176 451 526518020 526517727 2.080000e-82 316.0
48 TraesCS3B01G118300 chr2D 92.040 201 8 2 3328 3527 551848846 551848653 3.540000e-70 276.0
49 TraesCS3B01G118300 chr2B 87.415 294 15 4 176 451 622915930 622915641 5.790000e-83 318.0
50 TraesCS3B01G118300 chr2B 93.143 175 10 2 1 174 221723536 221723709 4.610000e-64 255.0
51 TraesCS3B01G118300 chr2B 89.000 200 13 4 3326 3524 777664245 777664436 4.640000e-59 239.0
52 TraesCS3B01G118300 chr2A 85.666 293 25 8 176 451 671705943 671705651 3.510000e-75 292.0
53 TraesCS3B01G118300 chr1A 93.678 174 8 3 2 174 328258677 328258506 1.280000e-64 257.0
54 TraesCS3B01G118300 chrUn 92.571 175 11 2 1 174 36475994 36475821 2.140000e-62 250.0
55 TraesCS3B01G118300 chr7D 92.529 174 13 0 1 174 575506361 575506534 2.140000e-62 250.0
56 TraesCS3B01G118300 chr5A 90.206 194 12 4 3329 3521 644023084 644023271 2.770000e-61 246.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G118300 chr3B 85091290 85094885 3595 True 6641.0 6641 100.0000 1 3596 1 chr3B.!!$R1 3595
1 TraesCS3B01G118300 chr3A 65466513 65468993 2480 False 3434.0 3434 91.9520 877 3325 1 chr3A.!!$F1 2448
2 TraesCS3B01G118300 chr3D 54984120 54986226 2106 True 2518.0 2518 88.4450 687 2781 1 chr3D.!!$R2 2094
3 TraesCS3B01G118300 chr3D 54829323 54831698 2375 True 1741.0 3363 91.6660 779 3103 2 chr3D.!!$R3 2324
4 TraesCS3B01G118300 chr4D 455257787 455258311 524 True 846.0 846 95.8100 176 698 1 chr4D.!!$R2 522
5 TraesCS3B01G118300 chr6D 430402540 430403470 930 False 819.0 819 82.5810 1611 2562 1 chr6D.!!$F3 951
6 TraesCS3B01G118300 chr6D 420567543 420569120 1577 True 679.0 837 84.3460 1031 2562 2 chr6D.!!$R3 1531
7 TraesCS3B01G118300 chr6D 420559294 420560870 1576 False 670.5 809 84.3510 1028 2562 2 chr6D.!!$F4 1534
8 TraesCS3B01G118300 chr6D 430322530 430323183 653 False 656.0 656 84.8020 1868 2524 1 chr6D.!!$F2 656
9 TraesCS3B01G118300 chr7B 145928317 145928841 524 True 835.0 835 95.4370 176 699 1 chr7B.!!$R1 523
10 TraesCS3B01G118300 chr7B 4604767 4605281 514 False 828.0 828 95.7280 176 688 1 chr7B.!!$F1 512
11 TraesCS3B01G118300 chr6A 563485460 563486383 923 False 833.0 833 83.1210 1631 2563 1 chr6A.!!$F1 932
12 TraesCS3B01G118300 chr6A 576913844 576914712 868 False 743.0 743 82.1950 1673 2562 1 chr6A.!!$F2 889
13 TraesCS3B01G118300 chr5B 504044386 504044902 516 False 832.0 832 95.7450 176 690 1 chr5B.!!$F1 514
14 TraesCS3B01G118300 chr6B 27633052 27633569 517 True 828.0 828 95.5600 176 691 1 chr6B.!!$R1 515
15 TraesCS3B01G118300 chr6B 648695995 648696918 923 False 795.0 795 82.2780 1618 2562 1 chr6B.!!$F4 944
16 TraesCS3B01G118300 chr6B 633730712 633732286 1574 False 666.0 800 84.2400 1028 2563 2 chr6B.!!$F5 1535
17 TraesCS3B01G118300 chr6B 612743594 612745114 1520 True 650.0 806 83.6805 1031 2563 2 chr6B.!!$R2 1532
18 TraesCS3B01G118300 chr6B 16241437 16242256 819 False 438.0 438 76.8530 1646 2518 1 chr6B.!!$F1 872
19 TraesCS3B01G118300 chr4B 604139827 604140724 897 False 797.0 797 82.8070 1629 2541 1 chr4B.!!$F2 912

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
117 118 0.032130 GATTCTGCGGCCTACATCGA 59.968 55.0 0.00 0.0 0.00 3.59 F
160 161 0.034283 GTCTAGACGTGAGGGGGAGT 60.034 60.0 7.22 0.0 0.00 3.85 F
161 162 0.034380 TCTAGACGTGAGGGGGAGTG 60.034 60.0 0.00 0.0 0.00 3.51 F
167 168 0.107831 CGTGAGGGGGAGTGTTGAAA 59.892 55.0 0.00 0.0 0.00 2.69 F
248 249 0.320421 GTTTGGCTGCTCCTACGACA 60.320 55.0 0.00 0.0 35.26 4.35 F
263 264 0.796312 CGACAGGTTCCATTTCCACG 59.204 55.0 0.00 0.0 0.00 4.94 F
426 428 1.026718 CCCTCCCTTCATGAACGCAC 61.027 60.0 3.38 0.0 0.00 5.34 F
553 557 1.412079 CTCTGCTGACTAGGCTCCAT 58.588 55.0 0.00 0.0 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1281 1329 1.003355 CTCCGTGGTGGACTTGCAT 60.003 57.895 0.00 0.00 43.74 3.96 R
1561 1628 2.382882 CAGAGCAGATAGGTCCACAGA 58.617 52.381 0.00 0.00 45.87 3.41 R
1603 1727 2.516695 TACGGCCCATGCATGCAG 60.517 61.111 26.69 16.97 40.13 4.41 R
1815 1939 4.124943 ACCGCCTCGCCCTCTAGA 62.125 66.667 0.00 0.00 0.00 2.43 R
1851 1975 4.351938 CCGTTGCCGTCACCGAGA 62.352 66.667 0.00 0.00 35.63 4.04 R
2325 2456 0.396811 GGTACCTGCAGTTGGTCTGT 59.603 55.000 13.81 3.81 45.23 3.41 R
2464 2595 1.919600 GCCTTCTCCTGCCACTCCAT 61.920 60.000 0.00 0.00 0.00 3.41 R
2597 2737 2.159028 ACAAACGTTTGGTTTCCCATGG 60.159 45.455 36.52 14.00 45.60 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.315251 GGACTTTTGGAGCAACTGGC 59.685 55.000 0.00 0.00 45.30 4.85
28 29 3.690745 GCAACTGGCTGGAGCATT 58.309 55.556 0.20 0.00 44.36 3.56
29 30 2.872408 GCAACTGGCTGGAGCATTA 58.128 52.632 0.20 0.00 44.36 1.90
30 31 1.176527 GCAACTGGCTGGAGCATTAA 58.823 50.000 0.20 0.00 44.36 1.40
31 32 1.753073 GCAACTGGCTGGAGCATTAAT 59.247 47.619 0.20 0.00 44.36 1.40
32 33 2.167075 GCAACTGGCTGGAGCATTAATT 59.833 45.455 0.20 0.00 44.36 1.40
33 34 3.736126 GCAACTGGCTGGAGCATTAATTC 60.736 47.826 0.20 0.00 44.36 2.17
34 35 3.370840 ACTGGCTGGAGCATTAATTCA 57.629 42.857 0.20 0.00 44.36 2.57
35 36 3.700538 ACTGGCTGGAGCATTAATTCAA 58.299 40.909 0.20 0.00 44.36 2.69
36 37 4.284178 ACTGGCTGGAGCATTAATTCAAT 58.716 39.130 0.20 0.00 44.36 2.57
37 38 5.448654 ACTGGCTGGAGCATTAATTCAATA 58.551 37.500 0.20 0.00 44.36 1.90
38 39 6.073314 ACTGGCTGGAGCATTAATTCAATAT 58.927 36.000 0.20 0.00 44.36 1.28
39 40 6.015688 ACTGGCTGGAGCATTAATTCAATATG 60.016 38.462 0.20 0.00 44.36 1.78
40 41 5.244402 TGGCTGGAGCATTAATTCAATATGG 59.756 40.000 0.20 0.00 44.36 2.74
41 42 5.244626 GGCTGGAGCATTAATTCAATATGGT 59.755 40.000 0.20 0.00 44.36 3.55
42 43 6.434028 GGCTGGAGCATTAATTCAATATGGTA 59.566 38.462 0.20 0.00 44.36 3.25
43 44 7.123247 GGCTGGAGCATTAATTCAATATGGTAT 59.877 37.037 0.20 0.00 44.36 2.73
44 45 8.186821 GCTGGAGCATTAATTCAATATGGTATC 58.813 37.037 0.00 0.00 41.59 2.24
45 46 8.579850 TGGAGCATTAATTCAATATGGTATCC 57.420 34.615 0.00 0.00 30.82 2.59
46 47 7.336679 TGGAGCATTAATTCAATATGGTATCCG 59.663 37.037 0.00 0.00 30.82 4.18
47 48 7.201732 GGAGCATTAATTCAATATGGTATCCGG 60.202 40.741 0.00 0.00 30.82 5.14
48 49 6.603201 AGCATTAATTCAATATGGTATCCGGG 59.397 38.462 0.00 0.00 0.00 5.73
49 50 6.680378 GCATTAATTCAATATGGTATCCGGGC 60.680 42.308 0.00 0.00 0.00 6.13
50 51 2.871096 TTCAATATGGTATCCGGGCC 57.129 50.000 0.00 0.00 0.00 5.80
51 52 1.735926 TCAATATGGTATCCGGGCCA 58.264 50.000 4.39 14.01 39.33 5.36
52 53 2.058705 TCAATATGGTATCCGGGCCAA 58.941 47.619 15.26 7.38 38.38 4.52
53 54 2.039746 TCAATATGGTATCCGGGCCAAG 59.960 50.000 15.26 0.00 38.38 3.61
54 55 2.038863 ATATGGTATCCGGGCCAAGA 57.961 50.000 15.26 0.00 38.38 3.02
55 56 1.348064 TATGGTATCCGGGCCAAGAG 58.652 55.000 15.26 0.00 38.38 2.85
56 57 1.418908 ATGGTATCCGGGCCAAGAGG 61.419 60.000 15.26 1.69 38.38 3.69
57 58 2.070650 GGTATCCGGGCCAAGAGGT 61.071 63.158 4.39 0.00 37.19 3.85
58 59 1.446366 GTATCCGGGCCAAGAGGTC 59.554 63.158 4.39 0.00 39.43 3.85
59 60 1.049289 GTATCCGGGCCAAGAGGTCT 61.049 60.000 4.39 0.00 40.27 3.85
60 61 0.326238 TATCCGGGCCAAGAGGTCTT 60.326 55.000 4.39 0.00 40.27 3.01
77 78 3.725754 TTGAGTTCAAGACCCTGCC 57.274 52.632 0.00 0.00 0.00 4.85
78 79 0.843309 TTGAGTTCAAGACCCTGCCA 59.157 50.000 0.00 0.00 0.00 4.92
79 80 0.843309 TGAGTTCAAGACCCTGCCAA 59.157 50.000 0.00 0.00 0.00 4.52
80 81 1.239347 GAGTTCAAGACCCTGCCAAC 58.761 55.000 0.00 0.00 0.00 3.77
81 82 0.550914 AGTTCAAGACCCTGCCAACA 59.449 50.000 0.00 0.00 0.00 3.33
82 83 0.668535 GTTCAAGACCCTGCCAACAC 59.331 55.000 0.00 0.00 0.00 3.32
83 84 0.257328 TTCAAGACCCTGCCAACACA 59.743 50.000 0.00 0.00 0.00 3.72
84 85 0.179020 TCAAGACCCTGCCAACACAG 60.179 55.000 0.00 0.00 37.42 3.66
85 86 0.466189 CAAGACCCTGCCAACACAGT 60.466 55.000 0.00 0.00 35.83 3.55
86 87 1.136828 AAGACCCTGCCAACACAGTA 58.863 50.000 0.00 0.00 35.83 2.74
87 88 1.362224 AGACCCTGCCAACACAGTAT 58.638 50.000 0.00 0.00 35.83 2.12
88 89 1.705186 AGACCCTGCCAACACAGTATT 59.295 47.619 0.00 0.00 35.83 1.89
89 90 2.910319 AGACCCTGCCAACACAGTATTA 59.090 45.455 0.00 0.00 35.83 0.98
90 91 3.329520 AGACCCTGCCAACACAGTATTAA 59.670 43.478 0.00 0.00 35.83 1.40
91 92 4.076394 GACCCTGCCAACACAGTATTAAA 58.924 43.478 0.00 0.00 35.83 1.52
92 93 4.672899 ACCCTGCCAACACAGTATTAAAT 58.327 39.130 0.00 0.00 35.83 1.40
93 94 5.822204 ACCCTGCCAACACAGTATTAAATA 58.178 37.500 0.00 0.00 35.83 1.40
94 95 6.249951 ACCCTGCCAACACAGTATTAAATAA 58.750 36.000 0.00 0.00 35.83 1.40
95 96 6.722129 ACCCTGCCAACACAGTATTAAATAAA 59.278 34.615 0.00 0.00 35.83 1.40
96 97 7.233757 ACCCTGCCAACACAGTATTAAATAAAA 59.766 33.333 0.00 0.00 35.83 1.52
97 98 7.544217 CCCTGCCAACACAGTATTAAATAAAAC 59.456 37.037 0.00 0.00 35.83 2.43
98 99 7.272515 CCTGCCAACACAGTATTAAATAAAACG 59.727 37.037 0.00 0.00 35.83 3.60
99 100 7.872881 TGCCAACACAGTATTAAATAAAACGA 58.127 30.769 0.00 0.00 0.00 3.85
100 101 8.516234 TGCCAACACAGTATTAAATAAAACGAT 58.484 29.630 0.00 0.00 0.00 3.73
101 102 9.349145 GCCAACACAGTATTAAATAAAACGATT 57.651 29.630 0.00 0.00 0.00 3.34
105 106 9.769093 ACACAGTATTAAATAAAACGATTCTGC 57.231 29.630 0.00 0.00 0.00 4.26
106 107 8.933955 CACAGTATTAAATAAAACGATTCTGCG 58.066 33.333 0.00 0.00 37.29 5.18
107 108 8.120465 ACAGTATTAAATAAAACGATTCTGCGG 58.880 33.333 0.00 0.00 35.12 5.69
108 109 7.111593 CAGTATTAAATAAAACGATTCTGCGGC 59.888 37.037 0.00 0.00 35.12 6.53
109 110 2.844122 AATAAAACGATTCTGCGGCC 57.156 45.000 0.00 0.00 35.12 6.13
110 111 2.038387 ATAAAACGATTCTGCGGCCT 57.962 45.000 0.00 0.00 35.12 5.19
111 112 2.676632 TAAAACGATTCTGCGGCCTA 57.323 45.000 0.00 0.00 35.12 3.93
112 113 1.084289 AAAACGATTCTGCGGCCTAC 58.916 50.000 0.00 0.00 35.12 3.18
113 114 0.036765 AAACGATTCTGCGGCCTACA 60.037 50.000 0.00 0.00 35.12 2.74
114 115 0.178068 AACGATTCTGCGGCCTACAT 59.822 50.000 0.00 0.00 35.12 2.29
115 116 0.249489 ACGATTCTGCGGCCTACATC 60.249 55.000 0.00 0.00 35.12 3.06
116 117 1.278172 CGATTCTGCGGCCTACATCG 61.278 60.000 0.00 3.24 0.00 3.84
117 118 0.032130 GATTCTGCGGCCTACATCGA 59.968 55.000 0.00 0.00 0.00 3.59
118 119 0.681733 ATTCTGCGGCCTACATCGAT 59.318 50.000 0.00 0.00 0.00 3.59
119 120 0.032130 TTCTGCGGCCTACATCGATC 59.968 55.000 0.00 0.00 0.00 3.69
120 121 1.373497 CTGCGGCCTACATCGATCC 60.373 63.158 0.00 0.00 0.00 3.36
121 122 2.048127 GCGGCCTACATCGATCCC 60.048 66.667 0.00 0.00 0.00 3.85
122 123 2.867855 GCGGCCTACATCGATCCCA 61.868 63.158 0.00 0.00 0.00 4.37
123 124 1.006102 CGGCCTACATCGATCCCAC 60.006 63.158 0.00 0.00 0.00 4.61
124 125 1.006102 GGCCTACATCGATCCCACG 60.006 63.158 0.00 0.00 0.00 4.94
125 126 1.740285 GCCTACATCGATCCCACGT 59.260 57.895 0.00 0.00 34.70 4.49
126 127 0.318784 GCCTACATCGATCCCACGTC 60.319 60.000 0.00 0.00 34.70 4.34
127 128 1.319541 CCTACATCGATCCCACGTCT 58.680 55.000 0.00 0.00 34.70 4.18
128 129 2.501261 CCTACATCGATCCCACGTCTA 58.499 52.381 0.00 0.00 34.70 2.59
129 130 2.882761 CCTACATCGATCCCACGTCTAA 59.117 50.000 0.00 0.00 34.70 2.10
130 131 2.865343 ACATCGATCCCACGTCTAAC 57.135 50.000 0.00 0.00 34.70 2.34
131 132 2.376109 ACATCGATCCCACGTCTAACT 58.624 47.619 0.00 0.00 34.70 2.24
132 133 2.099263 ACATCGATCCCACGTCTAACTG 59.901 50.000 0.00 0.00 34.70 3.16
133 134 2.118313 TCGATCCCACGTCTAACTGA 57.882 50.000 0.00 0.00 34.70 3.41
134 135 2.651455 TCGATCCCACGTCTAACTGAT 58.349 47.619 0.00 0.00 34.70 2.90
135 136 3.812262 TCGATCCCACGTCTAACTGATA 58.188 45.455 0.00 0.00 34.70 2.15
136 137 4.201657 TCGATCCCACGTCTAACTGATAA 58.798 43.478 0.00 0.00 34.70 1.75
137 138 4.641541 TCGATCCCACGTCTAACTGATAAA 59.358 41.667 0.00 0.00 34.70 1.40
138 139 5.125900 TCGATCCCACGTCTAACTGATAAAA 59.874 40.000 0.00 0.00 34.70 1.52
139 140 5.983720 CGATCCCACGTCTAACTGATAAAAT 59.016 40.000 0.00 0.00 0.00 1.82
140 141 7.013559 TCGATCCCACGTCTAACTGATAAAATA 59.986 37.037 0.00 0.00 34.70 1.40
141 142 7.326305 CGATCCCACGTCTAACTGATAAAATAG 59.674 40.741 0.00 0.00 0.00 1.73
142 143 7.414222 TCCCACGTCTAACTGATAAAATAGT 57.586 36.000 0.00 0.00 0.00 2.12
143 144 7.486647 TCCCACGTCTAACTGATAAAATAGTC 58.513 38.462 0.00 0.00 0.00 2.59
144 145 7.341256 TCCCACGTCTAACTGATAAAATAGTCT 59.659 37.037 0.00 0.00 0.00 3.24
145 146 8.627403 CCCACGTCTAACTGATAAAATAGTCTA 58.373 37.037 0.00 0.00 0.00 2.59
146 147 9.666626 CCACGTCTAACTGATAAAATAGTCTAG 57.333 37.037 0.00 0.00 0.00 2.43
149 150 9.583530 CGTCTAACTGATAAAATAGTCTAGACG 57.416 37.037 17.07 20.52 43.62 4.18
154 155 7.932335 ACTGATAAAATAGTCTAGACGTGAGG 58.068 38.462 17.07 4.44 36.20 3.86
155 156 7.013464 ACTGATAAAATAGTCTAGACGTGAGGG 59.987 40.741 17.07 5.06 36.20 4.30
156 157 6.264744 TGATAAAATAGTCTAGACGTGAGGGG 59.735 42.308 17.07 0.00 36.20 4.79
157 158 2.660670 ATAGTCTAGACGTGAGGGGG 57.339 55.000 17.07 0.00 36.20 5.40
158 159 1.588239 TAGTCTAGACGTGAGGGGGA 58.412 55.000 17.07 0.00 36.20 4.81
159 160 0.256464 AGTCTAGACGTGAGGGGGAG 59.744 60.000 17.07 0.00 36.20 4.30
160 161 0.034283 GTCTAGACGTGAGGGGGAGT 60.034 60.000 7.22 0.00 0.00 3.85
161 162 0.034380 TCTAGACGTGAGGGGGAGTG 60.034 60.000 0.00 0.00 0.00 3.51
162 163 0.323542 CTAGACGTGAGGGGGAGTGT 60.324 60.000 0.00 0.00 0.00 3.55
163 164 0.113776 TAGACGTGAGGGGGAGTGTT 59.886 55.000 0.00 0.00 0.00 3.32
164 165 1.004918 GACGTGAGGGGGAGTGTTG 60.005 63.158 0.00 0.00 0.00 3.33
165 166 1.458777 ACGTGAGGGGGAGTGTTGA 60.459 57.895 0.00 0.00 0.00 3.18
166 167 1.052124 ACGTGAGGGGGAGTGTTGAA 61.052 55.000 0.00 0.00 0.00 2.69
167 168 0.107831 CGTGAGGGGGAGTGTTGAAA 59.892 55.000 0.00 0.00 0.00 2.69
168 169 1.271379 CGTGAGGGGGAGTGTTGAAAT 60.271 52.381 0.00 0.00 0.00 2.17
169 170 2.027561 CGTGAGGGGGAGTGTTGAAATA 60.028 50.000 0.00 0.00 0.00 1.40
170 171 3.370527 CGTGAGGGGGAGTGTTGAAATAT 60.371 47.826 0.00 0.00 0.00 1.28
171 172 4.141801 CGTGAGGGGGAGTGTTGAAATATA 60.142 45.833 0.00 0.00 0.00 0.86
172 173 5.454755 CGTGAGGGGGAGTGTTGAAATATAT 60.455 44.000 0.00 0.00 0.00 0.86
173 174 6.365520 GTGAGGGGGAGTGTTGAAATATATT 58.634 40.000 0.00 0.00 0.00 1.28
174 175 6.833933 GTGAGGGGGAGTGTTGAAATATATTT 59.166 38.462 10.51 10.51 0.00 1.40
248 249 0.320421 GTTTGGCTGCTCCTACGACA 60.320 55.000 0.00 0.00 35.26 4.35
263 264 0.796312 CGACAGGTTCCATTTCCACG 59.204 55.000 0.00 0.00 0.00 4.94
411 413 1.349357 AGAACAAGAAGCTGGACCCTC 59.651 52.381 0.00 0.00 0.00 4.30
426 428 1.026718 CCCTCCCTTCATGAACGCAC 61.027 60.000 3.38 0.00 0.00 5.34
553 557 1.412079 CTCTGCTGACTAGGCTCCAT 58.588 55.000 0.00 0.00 0.00 3.41
593 597 4.159506 GGCTAGGACCAAATTTGCACATTA 59.840 41.667 12.92 4.96 0.00 1.90
595 599 6.162777 GCTAGGACCAAATTTGCACATTAAA 58.837 36.000 12.92 0.00 0.00 1.52
731 735 2.619074 GCTGCTATCACCCCTTCAAGTT 60.619 50.000 0.00 0.00 0.00 2.66
740 744 1.686587 CCCCTTCAAGTTGGACCAAAC 59.313 52.381 8.94 3.63 0.00 2.93
811 815 3.419759 CGTTGGTACCACAGGCGC 61.420 66.667 16.04 0.00 0.00 6.53
867 873 5.696822 TCGCTAGCTTATAAATACTCCGTG 58.303 41.667 13.93 0.00 0.00 4.94
926 964 2.392662 TGCACCAACCAAATCAAGGAA 58.607 42.857 0.00 0.00 0.00 3.36
936 974 7.066284 CCAACCAAATCAAGGAATACTCTACAG 59.934 40.741 0.00 0.00 0.00 2.74
937 975 7.259088 ACCAAATCAAGGAATACTCTACAGT 57.741 36.000 0.00 0.00 36.55 3.55
938 976 7.331791 ACCAAATCAAGGAATACTCTACAGTC 58.668 38.462 0.00 0.00 33.62 3.51
939 977 7.181125 ACCAAATCAAGGAATACTCTACAGTCT 59.819 37.037 0.00 0.00 33.62 3.24
940 978 8.696374 CCAAATCAAGGAATACTCTACAGTCTA 58.304 37.037 0.00 0.00 33.62 2.59
941 979 9.522804 CAAATCAAGGAATACTCTACAGTCTAC 57.477 37.037 0.00 0.00 33.62 2.59
942 980 8.824756 AATCAAGGAATACTCTACAGTCTACA 57.175 34.615 0.00 0.00 33.62 2.74
943 981 7.627298 TCAAGGAATACTCTACAGTCTACAC 57.373 40.000 0.00 0.00 33.62 2.90
944 982 7.173032 TCAAGGAATACTCTACAGTCTACACA 58.827 38.462 0.00 0.00 33.62 3.72
948 986 8.524487 AGGAATACTCTACAGTCTACACAAAAG 58.476 37.037 0.00 0.00 33.62 2.27
952 990 7.584122 ACTCTACAGTCTACACAAAAGAAGA 57.416 36.000 0.00 0.00 0.00 2.87
956 994 9.909644 TCTACAGTCTACACAAAAGAAGAATAC 57.090 33.333 0.00 0.00 0.00 1.89
989 1028 2.298729 CCCTTTTGCCATTTCGGAGAAA 59.701 45.455 0.00 0.00 45.90 2.52
990 1029 3.244044 CCCTTTTGCCATTTCGGAGAAAA 60.244 43.478 0.00 0.00 45.90 2.29
991 1030 3.989817 CCTTTTGCCATTTCGGAGAAAAG 59.010 43.478 0.00 0.00 45.90 2.27
992 1031 3.658757 TTTGCCATTTCGGAGAAAAGG 57.341 42.857 11.17 11.17 45.90 3.11
993 1032 2.577606 TGCCATTTCGGAGAAAAGGA 57.422 45.000 17.60 4.14 45.90 3.36
994 1033 3.085952 TGCCATTTCGGAGAAAAGGAT 57.914 42.857 17.60 0.00 45.90 3.24
995 1034 3.016736 TGCCATTTCGGAGAAAAGGATC 58.983 45.455 17.60 4.80 45.90 3.36
996 1035 2.032178 GCCATTTCGGAGAAAAGGATCG 59.968 50.000 17.60 0.00 45.90 3.69
1012 1060 4.812476 CGTCAATGGCCGCGGAGA 62.812 66.667 33.48 15.16 0.00 3.71
1013 1061 3.195698 GTCAATGGCCGCGGAGAC 61.196 66.667 33.48 22.22 0.00 3.36
1014 1062 3.700970 TCAATGGCCGCGGAGACA 61.701 61.111 33.48 24.22 0.00 3.41
1098 1146 2.591715 AACGTCGCCAAGCTGCTT 60.592 55.556 9.53 9.53 0.00 3.91
1104 1152 3.360340 GCCAAGCTGCTTCACGCT 61.360 61.111 12.82 0.00 40.11 5.07
1281 1329 2.782222 GCAGGACATCCCGTCGCTA 61.782 63.158 0.00 0.00 46.42 4.26
1533 1584 4.186159 CCCCACTTAAAGGTACGTACATG 58.814 47.826 26.02 10.57 0.00 3.21
1603 1727 7.224297 TCTGGCAATAATACCATCTCTTTACC 58.776 38.462 0.00 0.00 34.82 2.85
1851 1975 2.044946 GAGGCCATGGAACCGCTT 60.045 61.111 18.40 0.00 0.00 4.68
2325 2456 2.345991 CCCTTCTTCGGCGACCAA 59.654 61.111 10.16 4.08 0.00 3.67
2464 2595 1.680522 GCAGATGAGGAAGAGGGCGA 61.681 60.000 0.00 0.00 0.00 5.54
2465 2596 1.047002 CAGATGAGGAAGAGGGCGAT 58.953 55.000 0.00 0.00 0.00 4.58
2597 2737 1.563173 GTGTCGCGCGGGATTAATC 59.437 57.895 31.69 15.81 0.00 1.75
2641 2784 9.664332 TTGTGCTGCAAAATTACCATATTTTAT 57.336 25.926 2.77 0.00 35.98 1.40
2663 2809 4.452825 TGAAATGTGTCCCTTAAACGACA 58.547 39.130 0.00 1.13 36.67 4.35
2696 2844 3.380320 ACCTCTGTTTGTAAACTGCAACC 59.620 43.478 8.74 0.00 39.59 3.77
2697 2845 3.380004 CCTCTGTTTGTAAACTGCAACCA 59.620 43.478 8.74 0.00 39.59 3.67
2698 2846 4.037923 CCTCTGTTTGTAAACTGCAACCAT 59.962 41.667 8.74 0.00 39.59 3.55
2699 2847 5.240623 CCTCTGTTTGTAAACTGCAACCATA 59.759 40.000 8.74 0.00 39.59 2.74
2713 2861 8.076910 ACTGCAACCATATATTTCAATTTGGA 57.923 30.769 0.00 0.00 0.00 3.53
2733 2881 3.489416 GGATTGGTTTGTTTTCAAGCGAC 59.511 43.478 0.00 0.00 40.98 5.19
2734 2882 3.859411 TTGGTTTGTTTTCAAGCGACT 57.141 38.095 0.00 0.00 40.98 4.18
2878 3026 1.015085 CCGTTCCGTATTGCCGTTCA 61.015 55.000 0.00 0.00 0.00 3.18
2920 3068 6.534934 CAATACTTTAGACAGAGCGGTTTTC 58.465 40.000 0.00 0.00 0.00 2.29
2965 3113 5.934402 ATTCACTGTAGGATTAGGTTCGT 57.066 39.130 0.00 0.00 0.00 3.85
3078 3234 2.557056 GACCTGGTAGAAAGCCCAAAAC 59.443 50.000 0.00 0.00 0.00 2.43
3090 3246 1.480545 GCCCAAAACTGTGACCTTTGT 59.519 47.619 2.98 0.00 0.00 2.83
3205 3391 3.946201 CCATCGGCCAGGCTAGGG 61.946 72.222 12.43 7.53 0.00 3.53
3237 3423 7.466746 AAGCACTTTCATATAAGGCTTTTGA 57.533 32.000 4.45 4.08 37.88 2.69
3255 3441 1.119684 GAAAGCCCAACCCACAAACT 58.880 50.000 0.00 0.00 0.00 2.66
3261 3447 0.955905 CCAACCCACAAACTAACCCG 59.044 55.000 0.00 0.00 0.00 5.28
3269 3455 1.202842 ACAAACTAACCCGACCCAAGG 60.203 52.381 0.00 0.00 0.00 3.61
3276 3462 0.616891 ACCCGACCCAAGGTATGAAC 59.383 55.000 0.00 0.00 35.25 3.18
3294 3480 2.260639 ACAGGTCCAGGATGATGACT 57.739 50.000 0.00 0.00 39.69 3.41
3325 3511 3.202829 TCTCCAACTACTTTTTGGCGT 57.797 42.857 0.00 0.00 42.96 5.68
3326 3512 4.339872 TCTCCAACTACTTTTTGGCGTA 57.660 40.909 0.00 0.00 42.96 4.42
3327 3513 4.060205 TCTCCAACTACTTTTTGGCGTAC 58.940 43.478 0.00 0.00 42.96 3.67
3328 3514 3.140623 TCCAACTACTTTTTGGCGTACC 58.859 45.455 0.00 0.00 42.96 3.34
3341 3527 3.903360 TGGCGTACCAAAAATGCTAAAC 58.097 40.909 0.00 0.00 45.37 2.01
3342 3528 2.912345 GGCGTACCAAAAATGCTAAACG 59.088 45.455 0.00 0.00 35.26 3.60
3343 3529 3.557508 GCGTACCAAAAATGCTAAACGT 58.442 40.909 0.00 0.00 0.00 3.99
3344 3530 4.378253 GGCGTACCAAAAATGCTAAACGTA 60.378 41.667 0.00 0.00 35.26 3.57
3345 3531 4.550744 GCGTACCAAAAATGCTAAACGTAC 59.449 41.667 0.00 0.00 0.00 3.67
3346 3532 4.777527 CGTACCAAAAATGCTAAACGTACG 59.222 41.667 15.01 15.01 40.96 3.67
3347 3533 4.149910 ACCAAAAATGCTAAACGTACGG 57.850 40.909 21.06 2.24 0.00 4.02
3348 3534 3.058085 ACCAAAAATGCTAAACGTACGGG 60.058 43.478 21.06 8.43 0.00 5.28
3349 3535 2.905959 AAAATGCTAAACGTACGGGC 57.094 45.000 21.06 17.10 0.00 6.13
3350 3536 1.810959 AAATGCTAAACGTACGGGCA 58.189 45.000 21.06 21.66 37.32 5.36
3351 3537 1.081094 AATGCTAAACGTACGGGCAC 58.919 50.000 21.06 5.46 35.72 5.01
3364 3550 3.078836 GGCACCTACAGGCCCGTA 61.079 66.667 0.00 0.00 44.53 4.02
3365 3551 2.186125 GCACCTACAGGCCCGTAC 59.814 66.667 0.00 0.00 39.32 3.67
3366 3552 2.493030 CACCTACAGGCCCGTACG 59.507 66.667 8.69 8.69 39.32 3.67
3367 3553 2.048023 CACCTACAGGCCCGTACGA 61.048 63.158 18.76 0.00 39.32 3.43
3368 3554 1.751927 ACCTACAGGCCCGTACGAG 60.752 63.158 18.76 4.06 39.32 4.18
3369 3555 2.487532 CCTACAGGCCCGTACGAGG 61.488 68.421 18.76 17.00 0.00 4.63
3370 3556 1.452651 CTACAGGCCCGTACGAGGA 60.453 63.158 18.76 0.00 0.00 3.71
3371 3557 1.722636 CTACAGGCCCGTACGAGGAC 61.723 65.000 18.76 18.25 0.00 3.85
3372 3558 3.834799 CAGGCCCGTACGAGGACC 61.835 72.222 18.76 18.91 29.74 4.46
3373 3559 4.057943 AGGCCCGTACGAGGACCT 62.058 66.667 18.76 20.55 29.74 3.85
3374 3560 3.073101 GGCCCGTACGAGGACCTT 61.073 66.667 18.76 0.00 0.00 3.50
3375 3561 2.493501 GCCCGTACGAGGACCTTC 59.506 66.667 18.76 0.00 0.00 3.46
3376 3562 3.073742 GCCCGTACGAGGACCTTCC 62.074 68.421 18.76 0.00 36.58 3.46
3377 3563 1.679977 CCCGTACGAGGACCTTCCA 60.680 63.158 18.76 0.00 39.61 3.53
3378 3564 1.252904 CCCGTACGAGGACCTTCCAA 61.253 60.000 18.76 0.00 39.61 3.53
3379 3565 0.108945 CCGTACGAGGACCTTCCAAC 60.109 60.000 18.76 0.00 39.61 3.77
3380 3566 0.599558 CGTACGAGGACCTTCCAACA 59.400 55.000 10.44 0.00 39.61 3.33
3381 3567 1.000060 CGTACGAGGACCTTCCAACAA 60.000 52.381 10.44 0.00 39.61 2.83
3382 3568 2.546373 CGTACGAGGACCTTCCAACAAA 60.546 50.000 10.44 0.00 39.61 2.83
3383 3569 1.963172 ACGAGGACCTTCCAACAAAC 58.037 50.000 0.00 0.00 39.61 2.93
3384 3570 1.489230 ACGAGGACCTTCCAACAAACT 59.511 47.619 0.00 0.00 39.61 2.66
3385 3571 2.701951 ACGAGGACCTTCCAACAAACTA 59.298 45.455 0.00 0.00 39.61 2.24
3386 3572 3.135167 ACGAGGACCTTCCAACAAACTAA 59.865 43.478 0.00 0.00 39.61 2.24
3387 3573 4.131596 CGAGGACCTTCCAACAAACTAAA 58.868 43.478 0.00 0.00 39.61 1.85
3388 3574 4.024302 CGAGGACCTTCCAACAAACTAAAC 60.024 45.833 0.00 0.00 39.61 2.01
3389 3575 4.862371 AGGACCTTCCAACAAACTAAACA 58.138 39.130 0.00 0.00 39.61 2.83
3390 3576 4.643334 AGGACCTTCCAACAAACTAAACAC 59.357 41.667 0.00 0.00 39.61 3.32
3391 3577 4.643334 GGACCTTCCAACAAACTAAACACT 59.357 41.667 0.00 0.00 36.28 3.55
3392 3578 5.449999 GGACCTTCCAACAAACTAAACACTG 60.450 44.000 0.00 0.00 36.28 3.66
3393 3579 4.142249 ACCTTCCAACAAACTAAACACTGC 60.142 41.667 0.00 0.00 0.00 4.40
3394 3580 4.359706 CTTCCAACAAACTAAACACTGCC 58.640 43.478 0.00 0.00 0.00 4.85
3395 3581 2.691011 TCCAACAAACTAAACACTGCCC 59.309 45.455 0.00 0.00 0.00 5.36
3396 3582 2.223947 CCAACAAACTAAACACTGCCCC 60.224 50.000 0.00 0.00 0.00 5.80
3397 3583 1.699730 ACAAACTAAACACTGCCCCC 58.300 50.000 0.00 0.00 0.00 5.40
3411 3597 4.528121 CCCCCTCCCTCCTGATTT 57.472 61.111 0.00 0.00 0.00 2.17
3412 3598 2.728683 CCCCCTCCCTCCTGATTTT 58.271 57.895 0.00 0.00 0.00 1.82
3413 3599 0.553333 CCCCCTCCCTCCTGATTTTC 59.447 60.000 0.00 0.00 0.00 2.29
3414 3600 1.298953 CCCCTCCCTCCTGATTTTCA 58.701 55.000 0.00 0.00 0.00 2.69
3415 3601 1.213926 CCCCTCCCTCCTGATTTTCAG 59.786 57.143 0.00 0.00 43.91 3.02
3424 3610 2.134789 CTGATTTTCAGGAGGTGGGG 57.865 55.000 0.00 0.00 40.71 4.96
3425 3611 0.039618 TGATTTTCAGGAGGTGGGGC 59.960 55.000 0.00 0.00 0.00 5.80
3426 3612 0.684479 GATTTTCAGGAGGTGGGGCC 60.684 60.000 0.00 0.00 37.58 5.80
3435 3621 4.736739 GGTGGGGCCTACTTTGAC 57.263 61.111 20.11 0.00 0.00 3.18
3436 3622 1.765074 GGTGGGGCCTACTTTGACA 59.235 57.895 20.11 0.00 0.00 3.58
3437 3623 0.111639 GGTGGGGCCTACTTTGACAA 59.888 55.000 20.11 0.00 0.00 3.18
3438 3624 1.272480 GGTGGGGCCTACTTTGACAAT 60.272 52.381 20.11 0.00 0.00 2.71
3439 3625 2.525368 GTGGGGCCTACTTTGACAATT 58.475 47.619 13.48 0.00 0.00 2.32
3440 3626 3.562609 GGTGGGGCCTACTTTGACAATTA 60.563 47.826 20.11 0.00 0.00 1.40
3441 3627 4.083565 GTGGGGCCTACTTTGACAATTAA 58.916 43.478 13.48 0.00 0.00 1.40
3442 3628 4.525100 GTGGGGCCTACTTTGACAATTAAA 59.475 41.667 13.48 0.00 0.00 1.52
3443 3629 5.186992 GTGGGGCCTACTTTGACAATTAAAT 59.813 40.000 13.48 0.00 0.00 1.40
3444 3630 5.420739 TGGGGCCTACTTTGACAATTAAATC 59.579 40.000 0.84 0.00 0.00 2.17
3445 3631 5.163447 GGGGCCTACTTTGACAATTAAATCC 60.163 44.000 0.84 0.00 0.00 3.01
3446 3632 5.420739 GGGCCTACTTTGACAATTAAATCCA 59.579 40.000 0.84 0.00 0.00 3.41
3447 3633 6.071051 GGGCCTACTTTGACAATTAAATCCAA 60.071 38.462 0.84 0.00 0.00 3.53
3448 3634 7.364673 GGGCCTACTTTGACAATTAAATCCAAT 60.365 37.037 0.84 0.00 0.00 3.16
3449 3635 7.706607 GGCCTACTTTGACAATTAAATCCAATC 59.293 37.037 0.00 0.00 0.00 2.67
3450 3636 8.250332 GCCTACTTTGACAATTAAATCCAATCA 58.750 33.333 0.00 0.00 0.00 2.57
3451 3637 9.573133 CCTACTTTGACAATTAAATCCAATCAC 57.427 33.333 0.00 0.00 0.00 3.06
3454 3640 9.829507 ACTTTGACAATTAAATCCAATCACAAA 57.170 25.926 0.00 0.00 0.00 2.83
3456 3642 9.829507 TTTGACAATTAAATCCAATCACAAACT 57.170 25.926 0.00 0.00 0.00 2.66
3457 3643 9.829507 TTGACAATTAAATCCAATCACAAACTT 57.170 25.926 0.00 0.00 0.00 2.66
3458 3644 9.474920 TGACAATTAAATCCAATCACAAACTTC 57.525 29.630 0.00 0.00 0.00 3.01
3459 3645 8.831715 ACAATTAAATCCAATCACAAACTTCC 57.168 30.769 0.00 0.00 0.00 3.46
3460 3646 8.428063 ACAATTAAATCCAATCACAAACTTCCA 58.572 29.630 0.00 0.00 0.00 3.53
3461 3647 8.711457 CAATTAAATCCAATCACAAACTTCCAC 58.289 33.333 0.00 0.00 0.00 4.02
3462 3648 4.503741 AATCCAATCACAAACTTCCACG 57.496 40.909 0.00 0.00 0.00 4.94
3463 3649 2.925724 TCCAATCACAAACTTCCACGT 58.074 42.857 0.00 0.00 0.00 4.49
3464 3650 2.875933 TCCAATCACAAACTTCCACGTC 59.124 45.455 0.00 0.00 0.00 4.34
3465 3651 2.616376 CCAATCACAAACTTCCACGTCA 59.384 45.455 0.00 0.00 0.00 4.35
3466 3652 3.548014 CCAATCACAAACTTCCACGTCAC 60.548 47.826 0.00 0.00 0.00 3.67
3467 3653 2.388310 TCACAAACTTCCACGTCACA 57.612 45.000 0.00 0.00 0.00 3.58
3468 3654 2.912771 TCACAAACTTCCACGTCACAT 58.087 42.857 0.00 0.00 0.00 3.21
3469 3655 3.275143 TCACAAACTTCCACGTCACATT 58.725 40.909 0.00 0.00 0.00 2.71
3470 3656 4.443621 TCACAAACTTCCACGTCACATTA 58.556 39.130 0.00 0.00 0.00 1.90
3471 3657 5.060506 TCACAAACTTCCACGTCACATTAT 58.939 37.500 0.00 0.00 0.00 1.28
3472 3658 5.529430 TCACAAACTTCCACGTCACATTATT 59.471 36.000 0.00 0.00 0.00 1.40
3473 3659 6.038825 TCACAAACTTCCACGTCACATTATTT 59.961 34.615 0.00 0.00 0.00 1.40
3474 3660 6.695278 CACAAACTTCCACGTCACATTATTTT 59.305 34.615 0.00 0.00 0.00 1.82
3475 3661 6.915843 ACAAACTTCCACGTCACATTATTTTC 59.084 34.615 0.00 0.00 0.00 2.29
3476 3662 6.627395 AACTTCCACGTCACATTATTTTCA 57.373 33.333 0.00 0.00 0.00 2.69
3477 3663 6.627395 ACTTCCACGTCACATTATTTTCAA 57.373 33.333 0.00 0.00 0.00 2.69
3478 3664 6.668323 ACTTCCACGTCACATTATTTTCAAG 58.332 36.000 0.00 0.00 0.00 3.02
3479 3665 6.262273 ACTTCCACGTCACATTATTTTCAAGT 59.738 34.615 0.00 0.00 0.00 3.16
3480 3666 6.236017 TCCACGTCACATTATTTTCAAGTC 57.764 37.500 0.00 0.00 0.00 3.01
3481 3667 5.760743 TCCACGTCACATTATTTTCAAGTCA 59.239 36.000 0.00 0.00 0.00 3.41
3482 3668 6.261158 TCCACGTCACATTATTTTCAAGTCAA 59.739 34.615 0.00 0.00 0.00 3.18
3483 3669 6.359617 CCACGTCACATTATTTTCAAGTCAAC 59.640 38.462 0.00 0.00 0.00 3.18
3484 3670 6.359617 CACGTCACATTATTTTCAAGTCAACC 59.640 38.462 0.00 0.00 0.00 3.77
3485 3671 6.262273 ACGTCACATTATTTTCAAGTCAACCT 59.738 34.615 0.00 0.00 0.00 3.50
3486 3672 7.442969 ACGTCACATTATTTTCAAGTCAACCTA 59.557 33.333 0.00 0.00 0.00 3.08
3487 3673 8.450964 CGTCACATTATTTTCAAGTCAACCTAT 58.549 33.333 0.00 0.00 0.00 2.57
3495 3681 7.833285 TTTTCAAGTCAACCTATAAAAGCCT 57.167 32.000 0.00 0.00 0.00 4.58
3496 3682 6.817765 TTCAAGTCAACCTATAAAAGCCTG 57.182 37.500 0.00 0.00 0.00 4.85
3497 3683 5.876357 TCAAGTCAACCTATAAAAGCCTGT 58.124 37.500 0.00 0.00 0.00 4.00
3498 3684 7.011499 TCAAGTCAACCTATAAAAGCCTGTA 57.989 36.000 0.00 0.00 0.00 2.74
3499 3685 7.630082 TCAAGTCAACCTATAAAAGCCTGTAT 58.370 34.615 0.00 0.00 0.00 2.29
3500 3686 8.764558 TCAAGTCAACCTATAAAAGCCTGTATA 58.235 33.333 0.00 0.00 0.00 1.47
3501 3687 9.391006 CAAGTCAACCTATAAAAGCCTGTATAA 57.609 33.333 0.00 0.00 0.00 0.98
3503 3689 9.780186 AGTCAACCTATAAAAGCCTGTATAATC 57.220 33.333 0.00 0.00 0.00 1.75
3504 3690 9.000486 GTCAACCTATAAAAGCCTGTATAATCC 58.000 37.037 0.00 0.00 0.00 3.01
3505 3691 8.945193 TCAACCTATAAAAGCCTGTATAATCCT 58.055 33.333 0.00 0.00 0.00 3.24
3506 3692 9.003658 CAACCTATAAAAGCCTGTATAATCCTG 57.996 37.037 0.00 0.00 0.00 3.86
3507 3693 8.276453 ACCTATAAAAGCCTGTATAATCCTGT 57.724 34.615 0.00 0.00 0.00 4.00
3508 3694 9.388672 ACCTATAAAAGCCTGTATAATCCTGTA 57.611 33.333 0.00 0.00 0.00 2.74
3509 3695 9.654663 CCTATAAAAGCCTGTATAATCCTGTAC 57.345 37.037 0.00 0.00 0.00 2.90
3510 3696 9.355215 CTATAAAAGCCTGTATAATCCTGTACG 57.645 37.037 0.00 0.00 0.00 3.67
3511 3697 4.602340 AAGCCTGTATAATCCTGTACGG 57.398 45.455 0.00 0.00 0.00 4.02
3512 3698 2.897969 AGCCTGTATAATCCTGTACGGG 59.102 50.000 15.21 15.21 44.63 5.28
3513 3699 2.631545 GCCTGTATAATCCTGTACGGGT 59.368 50.000 20.40 4.82 44.02 5.28
3514 3700 3.828451 GCCTGTATAATCCTGTACGGGTA 59.172 47.826 20.40 7.06 44.02 3.69
3515 3701 4.082354 GCCTGTATAATCCTGTACGGGTAG 60.082 50.000 20.40 8.35 44.02 3.18
3516 3702 4.082354 CCTGTATAATCCTGTACGGGTAGC 60.082 50.000 20.40 7.00 39.63 3.58
3517 3703 4.472496 TGTATAATCCTGTACGGGTAGCA 58.528 43.478 20.40 9.26 0.00 3.49
3518 3704 5.081728 TGTATAATCCTGTACGGGTAGCAT 58.918 41.667 20.40 11.64 0.00 3.79
3519 3705 5.541101 TGTATAATCCTGTACGGGTAGCATT 59.459 40.000 20.40 14.29 0.00 3.56
3520 3706 6.720748 TGTATAATCCTGTACGGGTAGCATTA 59.279 38.462 20.40 15.86 0.00 1.90
3521 3707 6.869206 ATAATCCTGTACGGGTAGCATTAT 57.131 37.500 20.40 17.22 0.00 1.28
3522 3708 5.562298 AATCCTGTACGGGTAGCATTATT 57.438 39.130 20.40 8.05 0.00 1.40
3523 3709 4.330944 TCCTGTACGGGTAGCATTATTG 57.669 45.455 20.40 0.00 0.00 1.90
3524 3710 3.707611 TCCTGTACGGGTAGCATTATTGT 59.292 43.478 20.40 0.00 0.00 2.71
3525 3711 4.162698 TCCTGTACGGGTAGCATTATTGTT 59.837 41.667 20.40 0.00 0.00 2.83
3526 3712 4.879545 CCTGTACGGGTAGCATTATTGTTT 59.120 41.667 13.06 0.00 0.00 2.83
3527 3713 5.220777 CCTGTACGGGTAGCATTATTGTTTG 60.221 44.000 13.06 0.00 0.00 2.93
3528 3714 4.636648 TGTACGGGTAGCATTATTGTTTGG 59.363 41.667 0.00 0.00 0.00 3.28
3529 3715 2.425668 ACGGGTAGCATTATTGTTTGGC 59.574 45.455 0.00 0.00 0.00 4.52
3530 3716 2.540769 CGGGTAGCATTATTGTTTGGCG 60.541 50.000 0.00 0.00 0.00 5.69
3531 3717 2.425668 GGGTAGCATTATTGTTTGGCGT 59.574 45.455 0.00 0.00 0.00 5.68
3532 3718 3.628487 GGGTAGCATTATTGTTTGGCGTA 59.372 43.478 0.00 0.00 0.00 4.42
3533 3719 4.496840 GGGTAGCATTATTGTTTGGCGTAC 60.497 45.833 0.00 0.00 0.00 3.67
3534 3720 3.775661 AGCATTATTGTTTGGCGTACC 57.224 42.857 0.00 0.00 0.00 3.34
3547 3733 4.710167 GTACCACGCCCCCACCAC 62.710 72.222 0.00 0.00 0.00 4.16
3554 3740 2.682494 GCCCCCACCACGAGACTA 60.682 66.667 0.00 0.00 0.00 2.59
3555 3741 2.064581 GCCCCCACCACGAGACTAT 61.065 63.158 0.00 0.00 0.00 2.12
3556 3742 0.757935 GCCCCCACCACGAGACTATA 60.758 60.000 0.00 0.00 0.00 1.31
3557 3743 1.329256 CCCCCACCACGAGACTATAG 58.671 60.000 0.00 0.00 0.00 1.31
3558 3744 0.674534 CCCCACCACGAGACTATAGC 59.325 60.000 0.00 0.00 0.00 2.97
3559 3745 1.693627 CCCACCACGAGACTATAGCT 58.306 55.000 0.00 0.00 0.00 3.32
3560 3746 2.488528 CCCCACCACGAGACTATAGCTA 60.489 54.545 0.00 0.00 0.00 3.32
3561 3747 2.814919 CCCACCACGAGACTATAGCTAG 59.185 54.545 0.00 1.65 0.00 3.42
3562 3748 2.226912 CCACCACGAGACTATAGCTAGC 59.773 54.545 6.62 6.62 0.00 3.42
3563 3749 2.096169 CACCACGAGACTATAGCTAGCG 60.096 54.545 9.55 0.00 0.00 4.26
3564 3750 1.135916 CCACGAGACTATAGCTAGCGC 60.136 57.143 9.55 0.00 0.00 5.92
3576 3762 3.849951 TAGCGCTGCTAGCCACCC 61.850 66.667 22.90 0.00 40.44 4.61
3581 3767 3.720601 CTGCTAGCCACCCTGCCA 61.721 66.667 13.29 0.00 0.00 4.92
3582 3768 3.694058 CTGCTAGCCACCCTGCCAG 62.694 68.421 13.29 0.00 0.00 4.85
3584 3770 4.496336 CTAGCCACCCTGCCAGCC 62.496 72.222 0.00 0.00 0.00 4.85
3586 3772 3.634157 TAGCCACCCTGCCAGCCTA 62.634 63.158 0.00 0.00 0.00 3.93
3587 3773 4.803908 GCCACCCTGCCAGCCTAC 62.804 72.222 0.00 0.00 0.00 3.18
3588 3774 3.011517 CCACCCTGCCAGCCTACT 61.012 66.667 0.00 0.00 0.00 2.57
3589 3775 2.270205 CACCCTGCCAGCCTACTG 59.730 66.667 0.00 0.00 44.05 2.74
3590 3776 2.203998 ACCCTGCCAGCCTACTGT 60.204 61.111 0.00 0.00 42.81 3.55
3591 3777 1.847968 ACCCTGCCAGCCTACTGTT 60.848 57.895 0.00 0.00 42.81 3.16
3592 3778 1.380302 CCCTGCCAGCCTACTGTTT 59.620 57.895 0.00 0.00 42.81 2.83
3593 3779 0.962356 CCCTGCCAGCCTACTGTTTG 60.962 60.000 0.00 0.00 42.81 2.93
3594 3780 0.250901 CCTGCCAGCCTACTGTTTGT 60.251 55.000 0.00 0.00 42.81 2.83
3595 3781 0.877071 CTGCCAGCCTACTGTTTGTG 59.123 55.000 0.00 0.00 42.81 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.315251 GCCAGTTGCTCCAAAAGTCC 59.685 55.000 0.00 0.00 36.87 3.85
1 2 3.873805 GCCAGTTGCTCCAAAAGTC 57.126 52.632 0.00 0.00 36.87 3.01
11 12 1.176527 TTAATGCTCCAGCCAGTTGC 58.823 50.000 0.00 0.00 41.18 4.17
12 13 3.444742 TGAATTAATGCTCCAGCCAGTTG 59.555 43.478 0.00 0.00 41.18 3.16
13 14 3.700538 TGAATTAATGCTCCAGCCAGTT 58.299 40.909 0.00 0.00 41.18 3.16
14 15 3.370840 TGAATTAATGCTCCAGCCAGT 57.629 42.857 0.00 0.00 41.18 4.00
15 16 4.931661 ATTGAATTAATGCTCCAGCCAG 57.068 40.909 0.00 0.00 41.18 4.85
16 17 5.244402 CCATATTGAATTAATGCTCCAGCCA 59.756 40.000 0.00 0.00 41.18 4.75
17 18 5.244626 ACCATATTGAATTAATGCTCCAGCC 59.755 40.000 0.00 0.00 41.18 4.85
18 19 6.336842 ACCATATTGAATTAATGCTCCAGC 57.663 37.500 0.00 0.00 42.50 4.85
19 20 8.680903 GGATACCATATTGAATTAATGCTCCAG 58.319 37.037 0.00 0.00 0.00 3.86
20 21 7.336679 CGGATACCATATTGAATTAATGCTCCA 59.663 37.037 0.00 0.00 0.00 3.86
21 22 7.201732 CCGGATACCATATTGAATTAATGCTCC 60.202 40.741 0.00 0.00 0.00 4.70
22 23 7.201732 CCCGGATACCATATTGAATTAATGCTC 60.202 40.741 0.73 0.00 0.00 4.26
23 24 6.603201 CCCGGATACCATATTGAATTAATGCT 59.397 38.462 0.73 0.00 0.00 3.79
24 25 6.680378 GCCCGGATACCATATTGAATTAATGC 60.680 42.308 0.73 0.00 0.00 3.56
25 26 6.183360 GGCCCGGATACCATATTGAATTAATG 60.183 42.308 0.73 0.00 0.00 1.90
26 27 5.891551 GGCCCGGATACCATATTGAATTAAT 59.108 40.000 0.73 0.00 0.00 1.40
27 28 5.222151 TGGCCCGGATACCATATTGAATTAA 60.222 40.000 0.73 0.00 0.00 1.40
28 29 4.289934 TGGCCCGGATACCATATTGAATTA 59.710 41.667 0.73 0.00 0.00 1.40
29 30 3.075283 TGGCCCGGATACCATATTGAATT 59.925 43.478 0.73 0.00 0.00 2.17
30 31 2.647299 TGGCCCGGATACCATATTGAAT 59.353 45.455 0.73 0.00 0.00 2.57
31 32 2.058705 TGGCCCGGATACCATATTGAA 58.941 47.619 0.73 0.00 0.00 2.69
32 33 1.735926 TGGCCCGGATACCATATTGA 58.264 50.000 0.73 0.00 0.00 2.57
33 34 2.039746 TCTTGGCCCGGATACCATATTG 59.960 50.000 0.73 0.00 35.42 1.90
34 35 2.305927 CTCTTGGCCCGGATACCATATT 59.694 50.000 0.73 0.00 35.42 1.28
35 36 1.909302 CTCTTGGCCCGGATACCATAT 59.091 52.381 0.73 0.00 35.42 1.78
36 37 1.348064 CTCTTGGCCCGGATACCATA 58.652 55.000 0.73 0.00 35.42 2.74
37 38 1.418908 CCTCTTGGCCCGGATACCAT 61.419 60.000 0.73 0.00 35.42 3.55
38 39 2.070039 CCTCTTGGCCCGGATACCA 61.070 63.158 0.73 4.56 0.00 3.25
39 40 2.041206 GACCTCTTGGCCCGGATACC 62.041 65.000 0.73 1.21 36.63 2.73
40 41 1.049289 AGACCTCTTGGCCCGGATAC 61.049 60.000 0.73 0.00 36.63 2.24
41 42 0.326238 AAGACCTCTTGGCCCGGATA 60.326 55.000 0.73 0.00 34.38 2.59
42 43 1.616628 AAGACCTCTTGGCCCGGAT 60.617 57.895 0.73 0.00 34.38 4.18
43 44 2.203938 AAGACCTCTTGGCCCGGA 60.204 61.111 0.73 0.00 34.38 5.14
59 60 0.843309 TGGCAGGGTCTTGAACTCAA 59.157 50.000 0.00 0.00 0.00 3.02
60 61 0.843309 TTGGCAGGGTCTTGAACTCA 59.157 50.000 0.00 0.00 0.00 3.41
61 62 1.239347 GTTGGCAGGGTCTTGAACTC 58.761 55.000 0.00 0.00 0.00 3.01
62 63 0.550914 TGTTGGCAGGGTCTTGAACT 59.449 50.000 0.00 0.00 0.00 3.01
63 64 0.668535 GTGTTGGCAGGGTCTTGAAC 59.331 55.000 0.00 0.00 0.00 3.18
64 65 0.257328 TGTGTTGGCAGGGTCTTGAA 59.743 50.000 0.00 0.00 0.00 2.69
65 66 0.179020 CTGTGTTGGCAGGGTCTTGA 60.179 55.000 0.00 0.00 33.11 3.02
66 67 0.466189 ACTGTGTTGGCAGGGTCTTG 60.466 55.000 0.00 0.00 40.59 3.02
67 68 1.136828 TACTGTGTTGGCAGGGTCTT 58.863 50.000 0.00 0.00 40.59 3.01
68 69 1.362224 ATACTGTGTTGGCAGGGTCT 58.638 50.000 0.00 0.00 40.59 3.85
69 70 2.200373 AATACTGTGTTGGCAGGGTC 57.800 50.000 0.00 0.00 40.59 4.46
70 71 3.799432 TTAATACTGTGTTGGCAGGGT 57.201 42.857 0.00 0.00 40.59 4.34
71 72 6.767524 TTATTTAATACTGTGTTGGCAGGG 57.232 37.500 0.00 0.00 40.59 4.45
72 73 7.272515 CGTTTTATTTAATACTGTGTTGGCAGG 59.727 37.037 0.00 0.00 40.59 4.85
73 74 8.018520 TCGTTTTATTTAATACTGTGTTGGCAG 58.981 33.333 0.00 0.00 41.92 4.85
74 75 7.872881 TCGTTTTATTTAATACTGTGTTGGCA 58.127 30.769 0.00 0.00 0.00 4.92
75 76 8.905103 ATCGTTTTATTTAATACTGTGTTGGC 57.095 30.769 0.00 0.00 0.00 4.52
79 80 9.769093 GCAGAATCGTTTTATTTAATACTGTGT 57.231 29.630 0.00 0.00 0.00 3.72
80 81 8.933955 CGCAGAATCGTTTTATTTAATACTGTG 58.066 33.333 0.00 0.00 0.00 3.66
81 82 8.120465 CCGCAGAATCGTTTTATTTAATACTGT 58.880 33.333 0.00 0.00 0.00 3.55
82 83 7.111593 GCCGCAGAATCGTTTTATTTAATACTG 59.888 37.037 0.00 0.00 0.00 2.74
83 84 7.130269 GCCGCAGAATCGTTTTATTTAATACT 58.870 34.615 0.00 0.00 0.00 2.12
84 85 6.358822 GGCCGCAGAATCGTTTTATTTAATAC 59.641 38.462 0.00 0.00 0.00 1.89
85 86 6.261381 AGGCCGCAGAATCGTTTTATTTAATA 59.739 34.615 0.00 0.00 0.00 0.98
86 87 5.067283 AGGCCGCAGAATCGTTTTATTTAAT 59.933 36.000 0.00 0.00 0.00 1.40
87 88 4.396790 AGGCCGCAGAATCGTTTTATTTAA 59.603 37.500 0.00 0.00 0.00 1.52
88 89 3.942748 AGGCCGCAGAATCGTTTTATTTA 59.057 39.130 0.00 0.00 0.00 1.40
89 90 2.752903 AGGCCGCAGAATCGTTTTATTT 59.247 40.909 0.00 0.00 0.00 1.40
90 91 2.365582 AGGCCGCAGAATCGTTTTATT 58.634 42.857 0.00 0.00 0.00 1.40
91 92 2.038387 AGGCCGCAGAATCGTTTTAT 57.962 45.000 0.00 0.00 0.00 1.40
92 93 2.273557 GTAGGCCGCAGAATCGTTTTA 58.726 47.619 0.00 0.00 0.00 1.52
93 94 1.084289 GTAGGCCGCAGAATCGTTTT 58.916 50.000 0.00 0.00 0.00 2.43
94 95 0.036765 TGTAGGCCGCAGAATCGTTT 60.037 50.000 0.00 0.00 0.00 3.60
95 96 0.178068 ATGTAGGCCGCAGAATCGTT 59.822 50.000 8.88 0.00 0.00 3.85
96 97 0.249489 GATGTAGGCCGCAGAATCGT 60.249 55.000 8.88 0.00 0.00 3.73
97 98 1.278172 CGATGTAGGCCGCAGAATCG 61.278 60.000 12.57 12.57 0.00 3.34
98 99 0.032130 TCGATGTAGGCCGCAGAATC 59.968 55.000 8.88 3.64 0.00 2.52
99 100 0.681733 ATCGATGTAGGCCGCAGAAT 59.318 50.000 0.00 0.00 0.00 2.40
100 101 0.032130 GATCGATGTAGGCCGCAGAA 59.968 55.000 0.54 0.00 0.00 3.02
101 102 1.660355 GATCGATGTAGGCCGCAGA 59.340 57.895 0.54 2.74 0.00 4.26
102 103 1.373497 GGATCGATGTAGGCCGCAG 60.373 63.158 0.54 0.00 0.00 5.18
103 104 2.734591 GGATCGATGTAGGCCGCA 59.265 61.111 0.54 0.22 0.00 5.69
104 105 2.048127 GGGATCGATGTAGGCCGC 60.048 66.667 0.54 0.00 0.00 6.53
105 106 1.006102 GTGGGATCGATGTAGGCCG 60.006 63.158 0.54 0.00 0.00 6.13
106 107 1.006102 CGTGGGATCGATGTAGGCC 60.006 63.158 0.54 0.00 0.00 5.19
107 108 0.318784 GACGTGGGATCGATGTAGGC 60.319 60.000 0.54 0.00 34.70 3.93
108 109 1.319541 AGACGTGGGATCGATGTAGG 58.680 55.000 0.54 0.00 34.70 3.18
109 110 3.564644 AGTTAGACGTGGGATCGATGTAG 59.435 47.826 0.54 0.00 34.70 2.74
110 111 3.314357 CAGTTAGACGTGGGATCGATGTA 59.686 47.826 0.54 0.00 34.70 2.29
111 112 2.099263 CAGTTAGACGTGGGATCGATGT 59.901 50.000 0.54 0.00 34.70 3.06
112 113 2.357952 TCAGTTAGACGTGGGATCGATG 59.642 50.000 0.54 0.00 34.70 3.84
113 114 2.651455 TCAGTTAGACGTGGGATCGAT 58.349 47.619 0.00 0.00 34.70 3.59
114 115 2.118313 TCAGTTAGACGTGGGATCGA 57.882 50.000 0.00 0.00 34.70 3.59
115 116 4.563337 TTATCAGTTAGACGTGGGATCG 57.437 45.455 0.00 0.00 0.00 3.69
116 117 8.142551 ACTATTTTATCAGTTAGACGTGGGATC 58.857 37.037 0.00 0.00 0.00 3.36
117 118 8.019656 ACTATTTTATCAGTTAGACGTGGGAT 57.980 34.615 0.00 0.00 0.00 3.85
118 119 7.341256 AGACTATTTTATCAGTTAGACGTGGGA 59.659 37.037 0.00 0.00 0.00 4.37
119 120 7.490000 AGACTATTTTATCAGTTAGACGTGGG 58.510 38.462 0.00 0.00 0.00 4.61
120 121 9.666626 CTAGACTATTTTATCAGTTAGACGTGG 57.333 37.037 0.00 0.00 0.00 4.94
123 124 9.583530 CGTCTAGACTATTTTATCAGTTAGACG 57.416 37.037 20.34 19.45 42.97 4.18
128 129 8.407064 CCTCACGTCTAGACTATTTTATCAGTT 58.593 37.037 20.34 0.00 0.00 3.16
129 130 7.013464 CCCTCACGTCTAGACTATTTTATCAGT 59.987 40.741 20.34 4.31 0.00 3.41
130 131 7.364200 CCCTCACGTCTAGACTATTTTATCAG 58.636 42.308 20.34 3.69 0.00 2.90
131 132 6.264744 CCCCTCACGTCTAGACTATTTTATCA 59.735 42.308 20.34 0.00 0.00 2.15
132 133 6.294620 CCCCCTCACGTCTAGACTATTTTATC 60.295 46.154 20.34 0.00 0.00 1.75
133 134 5.539193 CCCCCTCACGTCTAGACTATTTTAT 59.461 44.000 20.34 0.00 0.00 1.40
134 135 4.891756 CCCCCTCACGTCTAGACTATTTTA 59.108 45.833 20.34 0.07 0.00 1.52
135 136 3.705072 CCCCCTCACGTCTAGACTATTTT 59.295 47.826 20.34 0.00 0.00 1.82
136 137 3.053095 TCCCCCTCACGTCTAGACTATTT 60.053 47.826 20.34 0.00 0.00 1.40
137 138 2.512896 TCCCCCTCACGTCTAGACTATT 59.487 50.000 20.34 2.18 0.00 1.73
138 139 2.106857 CTCCCCCTCACGTCTAGACTAT 59.893 54.545 20.34 6.03 0.00 2.12
139 140 1.489649 CTCCCCCTCACGTCTAGACTA 59.510 57.143 20.34 5.43 0.00 2.59
140 141 0.256464 CTCCCCCTCACGTCTAGACT 59.744 60.000 20.34 5.27 0.00 3.24
141 142 0.034283 ACTCCCCCTCACGTCTAGAC 60.034 60.000 13.18 13.18 0.00 2.59
142 143 0.034380 CACTCCCCCTCACGTCTAGA 60.034 60.000 0.00 0.00 0.00 2.43
143 144 0.323542 ACACTCCCCCTCACGTCTAG 60.324 60.000 0.00 0.00 0.00 2.43
144 145 0.113776 AACACTCCCCCTCACGTCTA 59.886 55.000 0.00 0.00 0.00 2.59
145 146 1.152312 AACACTCCCCCTCACGTCT 60.152 57.895 0.00 0.00 0.00 4.18
146 147 1.004918 CAACACTCCCCCTCACGTC 60.005 63.158 0.00 0.00 0.00 4.34
147 148 1.052124 TTCAACACTCCCCCTCACGT 61.052 55.000 0.00 0.00 0.00 4.49
148 149 0.107831 TTTCAACACTCCCCCTCACG 59.892 55.000 0.00 0.00 0.00 4.35
149 150 2.586648 ATTTCAACACTCCCCCTCAC 57.413 50.000 0.00 0.00 0.00 3.51
150 151 6.590656 AATATATTTCAACACTCCCCCTCA 57.409 37.500 0.00 0.00 0.00 3.86
151 152 7.511959 GAAATATATTTCAACACTCCCCCTC 57.488 40.000 26.36 1.73 44.19 4.30
163 164 6.018262 CCTCGAAGGCGTTGAAATATATTTCA 60.018 38.462 28.93 28.93 44.40 2.69
164 165 6.202188 TCCTCGAAGGCGTTGAAATATATTTC 59.798 38.462 25.14 25.14 41.30 2.17
165 166 6.053005 TCCTCGAAGGCGTTGAAATATATTT 58.947 36.000 10.51 10.51 38.98 1.40
166 167 5.607477 TCCTCGAAGGCGTTGAAATATATT 58.393 37.500 0.00 0.00 38.98 1.28
167 168 5.209818 TCCTCGAAGGCGTTGAAATATAT 57.790 39.130 0.00 0.00 38.98 0.86
168 169 4.500887 CCTCCTCGAAGGCGTTGAAATATA 60.501 45.833 0.00 0.00 38.98 0.86
169 170 3.458189 CTCCTCGAAGGCGTTGAAATAT 58.542 45.455 0.00 0.00 38.98 1.28
170 171 2.418197 CCTCCTCGAAGGCGTTGAAATA 60.418 50.000 0.00 0.00 38.98 1.40
171 172 1.676014 CCTCCTCGAAGGCGTTGAAAT 60.676 52.381 0.00 0.00 38.98 2.17
172 173 0.320421 CCTCCTCGAAGGCGTTGAAA 60.320 55.000 0.00 0.00 38.98 2.69
173 174 1.183030 TCCTCCTCGAAGGCGTTGAA 61.183 55.000 0.00 0.00 38.98 2.69
174 175 1.605451 TCCTCCTCGAAGGCGTTGA 60.605 57.895 0.00 0.00 38.98 3.18
231 232 1.591703 CTGTCGTAGGAGCAGCCAA 59.408 57.895 0.00 0.00 40.02 4.52
232 233 3.288484 CTGTCGTAGGAGCAGCCA 58.712 61.111 0.00 0.00 40.02 4.75
248 249 0.999712 ATCCCGTGGAAATGGAACCT 59.000 50.000 0.00 0.00 34.34 3.50
263 264 1.799544 ACGACGTTACCAAACATCCC 58.200 50.000 0.00 0.00 35.16 3.85
411 413 1.466167 CTTCAGTGCGTTCATGAAGGG 59.534 52.381 25.08 14.41 43.94 3.95
426 428 2.094854 GCAGCATTTCCTTGGTCTTCAG 60.095 50.000 0.00 0.00 0.00 3.02
553 557 3.057969 AGCCAATCAGACGATGACAAA 57.942 42.857 0.00 0.00 41.91 2.83
593 597 1.693062 TGCATCCCACAACTTGCATTT 59.307 42.857 0.00 0.00 39.98 2.32
595 599 1.340088 TTGCATCCCACAACTTGCAT 58.660 45.000 0.00 0.00 43.91 3.96
628 632 9.383519 GGATGTGATGATCTAGTTCAAAACTTA 57.616 33.333 7.56 0.00 42.81 2.24
637 641 4.964897 TGTCCAGGATGTGATGATCTAGTT 59.035 41.667 0.00 0.00 0.00 2.24
720 724 1.686587 GTTTGGTCCAACTTGAAGGGG 59.313 52.381 2.98 0.00 0.00 4.79
731 735 5.205056 ACAATTACTTCTTGGTTTGGTCCA 58.795 37.500 0.00 0.00 35.49 4.02
740 744 4.082625 TGCATGCTGACAATTACTTCTTGG 60.083 41.667 20.33 0.00 0.00 3.61
744 748 3.419915 CGTGCATGCTGACAATTACTTC 58.580 45.455 20.33 0.00 0.00 3.01
833 839 3.826754 CTAGCGAGCACGGCCTCA 61.827 66.667 5.52 0.00 40.15 3.86
867 873 6.384015 TGGATATGGATATGGATACTGTGGAC 59.616 42.308 0.00 0.00 37.61 4.02
926 964 9.298250 TCTTCTTTTGTGTAGACTGTAGAGTAT 57.702 33.333 0.00 0.00 30.16 2.12
936 974 8.381387 GGATTCGTATTCTTCTTTTGTGTAGAC 58.619 37.037 0.00 0.00 0.00 2.59
937 975 7.548075 GGGATTCGTATTCTTCTTTTGTGTAGA 59.452 37.037 0.00 0.00 0.00 2.59
938 976 7.333423 TGGGATTCGTATTCTTCTTTTGTGTAG 59.667 37.037 0.00 0.00 0.00 2.74
939 977 7.118680 GTGGGATTCGTATTCTTCTTTTGTGTA 59.881 37.037 0.00 0.00 0.00 2.90
940 978 6.001460 TGGGATTCGTATTCTTCTTTTGTGT 58.999 36.000 0.00 0.00 0.00 3.72
941 979 6.072728 TGTGGGATTCGTATTCTTCTTTTGTG 60.073 38.462 0.00 0.00 0.00 3.33
942 980 6.001460 TGTGGGATTCGTATTCTTCTTTTGT 58.999 36.000 0.00 0.00 0.00 2.83
943 981 6.494893 TGTGGGATTCGTATTCTTCTTTTG 57.505 37.500 0.00 0.00 0.00 2.44
944 982 5.123979 GCTGTGGGATTCGTATTCTTCTTTT 59.876 40.000 0.00 0.00 0.00 2.27
948 986 2.872858 GGCTGTGGGATTCGTATTCTTC 59.127 50.000 0.00 0.00 0.00 2.87
952 990 1.213296 AGGGCTGTGGGATTCGTATT 58.787 50.000 0.00 0.00 0.00 1.89
956 994 0.527565 CAAAAGGGCTGTGGGATTCG 59.472 55.000 0.00 0.00 0.00 3.34
989 1028 1.819632 GCGGCCATTGACGATCCTT 60.820 57.895 2.24 0.00 0.00 3.36
990 1029 2.203070 GCGGCCATTGACGATCCT 60.203 61.111 2.24 0.00 0.00 3.24
991 1030 3.640000 CGCGGCCATTGACGATCC 61.640 66.667 2.24 0.00 0.00 3.36
992 1031 3.640000 CCGCGGCCATTGACGATC 61.640 66.667 14.67 0.00 0.00 3.69
993 1032 4.155733 TCCGCGGCCATTGACGAT 62.156 61.111 23.51 0.00 0.00 3.73
994 1033 4.812476 CTCCGCGGCCATTGACGA 62.812 66.667 23.51 0.00 0.00 4.20
995 1034 4.812476 TCTCCGCGGCCATTGACG 62.812 66.667 23.51 0.72 0.00 4.35
996 1035 3.195698 GTCTCCGCGGCCATTGAC 61.196 66.667 23.51 18.03 0.00 3.18
1012 1060 2.203773 GGGTTGGGGTGGCATTGT 60.204 61.111 0.00 0.00 0.00 2.71
1013 1061 3.002583 GGGGTTGGGGTGGCATTG 61.003 66.667 0.00 0.00 0.00 2.82
1014 1062 3.526428 TGGGGTTGGGGTGGCATT 61.526 61.111 0.00 0.00 0.00 3.56
1281 1329 1.003355 CTCCGTGGTGGACTTGCAT 60.003 57.895 0.00 0.00 43.74 3.96
1561 1628 2.382882 CAGAGCAGATAGGTCCACAGA 58.617 52.381 0.00 0.00 45.87 3.41
1603 1727 2.516695 TACGGCCCATGCATGCAG 60.517 61.111 26.69 16.97 40.13 4.41
1815 1939 4.124943 ACCGCCTCGCCCTCTAGA 62.125 66.667 0.00 0.00 0.00 2.43
1851 1975 4.351938 CCGTTGCCGTCACCGAGA 62.352 66.667 0.00 0.00 35.63 4.04
2325 2456 0.396811 GGTACCTGCAGTTGGTCTGT 59.603 55.000 13.81 3.81 45.23 3.41
2464 2595 1.919600 GCCTTCTCCTGCCACTCCAT 61.920 60.000 0.00 0.00 0.00 3.41
2465 2596 2.596851 GCCTTCTCCTGCCACTCCA 61.597 63.158 0.00 0.00 0.00 3.86
2597 2737 2.159028 ACAAACGTTTGGTTTCCCATGG 60.159 45.455 36.52 14.00 45.60 3.66
2618 2761 9.881649 TTCATAAAATATGGTAATTTTGCAGCA 57.118 25.926 0.00 0.00 38.98 4.41
2641 2784 4.452825 TGTCGTTTAAGGGACACATTTCA 58.547 39.130 6.58 0.00 38.19 2.69
2663 2809 5.552870 ACAAACAGAGGTCACTGATAACT 57.447 39.130 0.00 0.00 40.63 2.24
2713 2861 4.111916 CAGTCGCTTGAAAACAAACCAAT 58.888 39.130 0.00 0.00 0.00 3.16
2733 2881 7.597643 CAAAATGTGCTTATTTTGTTTGCAG 57.402 32.000 20.94 4.50 45.87 4.41
2908 3056 5.122239 TCAGTGAAATATGAAAACCGCTCTG 59.878 40.000 0.00 0.00 0.00 3.35
2920 3068 7.798596 ATTGCTTAGACCTCAGTGAAATATG 57.201 36.000 0.00 0.00 0.00 1.78
3167 3353 9.003658 CGATGGCCTAGAAAATTGTATTTCTAT 57.996 33.333 3.32 0.00 45.78 1.98
3168 3354 7.444183 CCGATGGCCTAGAAAATTGTATTTCTA 59.556 37.037 3.32 8.67 45.39 2.10
3169 3355 9.076625 GCCGATGGCCTAGAAAATTGTATTTCT 62.077 40.741 3.32 7.38 45.38 2.52
3170 3356 6.438763 CCGATGGCCTAGAAAATTGTATTTC 58.561 40.000 3.32 0.00 39.16 2.17
3175 3361 2.024414 GCCGATGGCCTAGAAAATTGT 58.976 47.619 3.32 0.00 44.06 2.71
3203 3389 1.304464 AAAGTGCTTAGCCTGGCCC 60.304 57.895 16.57 2.05 0.00 5.80
3204 3390 0.609131 TGAAAGTGCTTAGCCTGGCC 60.609 55.000 16.57 0.00 0.00 5.36
3205 3391 1.467920 ATGAAAGTGCTTAGCCTGGC 58.532 50.000 11.65 11.65 0.00 4.85
3206 3392 5.471456 CCTTATATGAAAGTGCTTAGCCTGG 59.529 44.000 0.29 0.00 0.00 4.45
3207 3393 5.049129 GCCTTATATGAAAGTGCTTAGCCTG 60.049 44.000 0.29 0.00 0.00 4.85
3208 3394 5.066593 GCCTTATATGAAAGTGCTTAGCCT 58.933 41.667 0.29 0.00 0.00 4.58
3209 3395 5.066593 AGCCTTATATGAAAGTGCTTAGCC 58.933 41.667 0.29 0.00 32.52 3.93
3210 3396 6.625873 AAGCCTTATATGAAAGTGCTTAGC 57.374 37.500 0.00 0.00 39.28 3.09
3211 3397 8.677300 TCAAAAGCCTTATATGAAAGTGCTTAG 58.323 33.333 11.28 8.97 39.72 2.18
3212 3398 8.574251 TCAAAAGCCTTATATGAAAGTGCTTA 57.426 30.769 11.28 0.28 39.72 3.09
3213 3399 7.466746 TCAAAAGCCTTATATGAAAGTGCTT 57.533 32.000 7.55 7.55 41.05 3.91
3237 3423 2.432874 GTTAGTTTGTGGGTTGGGCTTT 59.567 45.455 0.00 0.00 0.00 3.51
3255 3441 2.236893 GTTCATACCTTGGGTCGGGTTA 59.763 50.000 0.00 0.00 37.09 2.85
3261 3447 2.355818 GGACCTGTTCATACCTTGGGTC 60.356 54.545 0.00 0.00 40.44 4.46
3269 3455 4.101585 TCATCATCCTGGACCTGTTCATAC 59.898 45.833 0.00 0.00 0.00 2.39
3276 3462 2.616634 CAGTCATCATCCTGGACCTG 57.383 55.000 0.00 0.00 31.99 4.00
3294 3480 5.144159 AGTAGTTGGAGATACAGGATCCA 57.856 43.478 15.82 0.00 41.33 3.41
3296 3482 8.202745 CAAAAAGTAGTTGGAGATACAGGATC 57.797 38.462 0.00 0.00 34.40 3.36
3325 3511 4.153835 CCCGTACGTTTAGCATTTTTGGTA 59.846 41.667 15.21 0.00 0.00 3.25
3326 3512 3.058085 CCCGTACGTTTAGCATTTTTGGT 60.058 43.478 15.21 0.00 0.00 3.67
3327 3513 3.494232 CCCGTACGTTTAGCATTTTTGG 58.506 45.455 15.21 0.00 0.00 3.28
3328 3514 2.912345 GCCCGTACGTTTAGCATTTTTG 59.088 45.455 15.21 0.00 0.00 2.44
3329 3515 2.553172 TGCCCGTACGTTTAGCATTTTT 59.447 40.909 15.21 0.00 0.00 1.94
3330 3516 2.095617 GTGCCCGTACGTTTAGCATTTT 60.096 45.455 15.21 0.00 35.62 1.82
3331 3517 1.465777 GTGCCCGTACGTTTAGCATTT 59.534 47.619 15.21 0.00 35.62 2.32
3332 3518 1.081094 GTGCCCGTACGTTTAGCATT 58.919 50.000 15.21 0.00 35.62 3.56
3333 3519 0.741927 GGTGCCCGTACGTTTAGCAT 60.742 55.000 15.21 0.00 35.62 3.79
3334 3520 1.374505 GGTGCCCGTACGTTTAGCA 60.375 57.895 15.21 14.11 0.00 3.49
3335 3521 0.173255 TAGGTGCCCGTACGTTTAGC 59.827 55.000 15.21 11.67 0.00 3.09
3336 3522 1.202114 TGTAGGTGCCCGTACGTTTAG 59.798 52.381 15.21 0.00 35.24 1.85
3337 3523 1.202114 CTGTAGGTGCCCGTACGTTTA 59.798 52.381 15.21 0.00 35.24 2.01
3338 3524 0.037975 CTGTAGGTGCCCGTACGTTT 60.038 55.000 15.21 0.00 35.24 3.60
3339 3525 1.588082 CTGTAGGTGCCCGTACGTT 59.412 57.895 15.21 0.00 35.24 3.99
3340 3526 2.345760 CCTGTAGGTGCCCGTACGT 61.346 63.158 15.21 0.00 35.24 3.57
3341 3527 2.493030 CCTGTAGGTGCCCGTACG 59.507 66.667 8.69 8.69 35.24 3.67
3342 3528 2.186125 GCCTGTAGGTGCCCGTAC 59.814 66.667 0.00 0.00 37.57 3.67
3343 3529 3.078836 GGCCTGTAGGTGCCCGTA 61.079 66.667 0.00 0.00 41.97 4.02
3348 3534 2.186125 GTACGGGCCTGTAGGTGC 59.814 66.667 25.21 9.47 37.57 5.01
3349 3535 2.001361 CTCGTACGGGCCTGTAGGTG 62.001 65.000 32.96 28.64 37.57 4.00
3350 3536 1.751927 CTCGTACGGGCCTGTAGGT 60.752 63.158 32.96 10.58 37.57 3.08
3351 3537 2.487532 CCTCGTACGGGCCTGTAGG 61.488 68.421 30.46 30.46 38.53 3.18
3352 3538 1.452651 TCCTCGTACGGGCCTGTAG 60.453 63.158 25.21 15.08 0.00 2.74
3353 3539 1.750399 GTCCTCGTACGGGCCTGTA 60.750 63.158 21.00 21.00 0.00 2.74
3354 3540 3.066814 GTCCTCGTACGGGCCTGT 61.067 66.667 23.52 23.52 0.00 4.00
3355 3541 3.834799 GGTCCTCGTACGGGCCTG 61.835 72.222 16.52 11.02 45.64 4.85
3358 3544 2.493501 GAAGGTCCTCGTACGGGC 59.506 66.667 16.52 11.02 0.00 6.13
3359 3545 1.252904 TTGGAAGGTCCTCGTACGGG 61.253 60.000 16.52 12.77 37.46 5.28
3360 3546 0.108945 GTTGGAAGGTCCTCGTACGG 60.109 60.000 16.52 6.09 37.46 4.02
3361 3547 0.599558 TGTTGGAAGGTCCTCGTACG 59.400 55.000 9.53 9.53 37.46 3.67
3362 3548 2.804527 GTTTGTTGGAAGGTCCTCGTAC 59.195 50.000 0.00 0.00 37.46 3.67
3363 3549 2.701951 AGTTTGTTGGAAGGTCCTCGTA 59.298 45.455 0.00 0.00 37.46 3.43
3364 3550 1.489230 AGTTTGTTGGAAGGTCCTCGT 59.511 47.619 0.00 0.00 37.46 4.18
3365 3551 2.256117 AGTTTGTTGGAAGGTCCTCG 57.744 50.000 0.00 0.00 37.46 4.63
3366 3552 4.885325 TGTTTAGTTTGTTGGAAGGTCCTC 59.115 41.667 0.00 0.00 37.46 3.71
3367 3553 4.643334 GTGTTTAGTTTGTTGGAAGGTCCT 59.357 41.667 0.00 0.00 37.46 3.85
3368 3554 4.643334 AGTGTTTAGTTTGTTGGAAGGTCC 59.357 41.667 0.00 0.00 36.96 4.46
3369 3555 5.578776 CAGTGTTTAGTTTGTTGGAAGGTC 58.421 41.667 0.00 0.00 0.00 3.85
3370 3556 4.142249 GCAGTGTTTAGTTTGTTGGAAGGT 60.142 41.667 0.00 0.00 0.00 3.50
3371 3557 4.359706 GCAGTGTTTAGTTTGTTGGAAGG 58.640 43.478 0.00 0.00 0.00 3.46
3372 3558 4.359706 GGCAGTGTTTAGTTTGTTGGAAG 58.640 43.478 0.00 0.00 0.00 3.46
3373 3559 3.131400 GGGCAGTGTTTAGTTTGTTGGAA 59.869 43.478 0.00 0.00 0.00 3.53
3374 3560 2.691011 GGGCAGTGTTTAGTTTGTTGGA 59.309 45.455 0.00 0.00 0.00 3.53
3375 3561 2.223947 GGGGCAGTGTTTAGTTTGTTGG 60.224 50.000 0.00 0.00 0.00 3.77
3376 3562 2.223947 GGGGGCAGTGTTTAGTTTGTTG 60.224 50.000 0.00 0.00 0.00 3.33
3377 3563 2.036387 GGGGGCAGTGTTTAGTTTGTT 58.964 47.619 0.00 0.00 0.00 2.83
3378 3564 1.699730 GGGGGCAGTGTTTAGTTTGT 58.300 50.000 0.00 0.00 0.00 2.83
3394 3580 0.553333 GAAAATCAGGAGGGAGGGGG 59.447 60.000 0.00 0.00 0.00 5.40
3395 3581 1.213926 CTGAAAATCAGGAGGGAGGGG 59.786 57.143 0.00 0.00 40.71 4.79
3396 3582 2.725221 CTGAAAATCAGGAGGGAGGG 57.275 55.000 0.00 0.00 40.71 4.30
3405 3591 1.957113 GCCCCACCTCCTGAAAATCAG 60.957 57.143 0.32 0.32 43.91 2.90
3406 3592 0.039618 GCCCCACCTCCTGAAAATCA 59.960 55.000 0.00 0.00 0.00 2.57
3407 3593 0.684479 GGCCCCACCTCCTGAAAATC 60.684 60.000 0.00 0.00 34.51 2.17
3408 3594 1.388133 GGCCCCACCTCCTGAAAAT 59.612 57.895 0.00 0.00 34.51 1.82
3409 3595 2.851045 GGCCCCACCTCCTGAAAA 59.149 61.111 0.00 0.00 34.51 2.29
3418 3604 0.111639 TTGTCAAAGTAGGCCCCACC 59.888 55.000 0.00 0.00 39.61 4.61
3419 3605 2.215942 ATTGTCAAAGTAGGCCCCAC 57.784 50.000 0.00 0.00 0.00 4.61
3420 3606 2.990740 AATTGTCAAAGTAGGCCCCA 57.009 45.000 0.00 0.00 0.00 4.96
3421 3607 5.163447 GGATTTAATTGTCAAAGTAGGCCCC 60.163 44.000 0.00 0.00 0.00 5.80
3422 3608 5.420739 TGGATTTAATTGTCAAAGTAGGCCC 59.579 40.000 0.00 0.00 0.00 5.80
3423 3609 6.524101 TGGATTTAATTGTCAAAGTAGGCC 57.476 37.500 0.00 0.00 0.00 5.19
3424 3610 8.250332 TGATTGGATTTAATTGTCAAAGTAGGC 58.750 33.333 0.00 0.00 0.00 3.93
3425 3611 9.573133 GTGATTGGATTTAATTGTCAAAGTAGG 57.427 33.333 0.00 0.00 0.00 3.18
3428 3614 9.829507 TTTGTGATTGGATTTAATTGTCAAAGT 57.170 25.926 0.00 0.00 0.00 2.66
3430 3616 9.829507 AGTTTGTGATTGGATTTAATTGTCAAA 57.170 25.926 0.00 0.00 0.00 2.69
3431 3617 9.829507 AAGTTTGTGATTGGATTTAATTGTCAA 57.170 25.926 0.00 0.00 0.00 3.18
3432 3618 9.474920 GAAGTTTGTGATTGGATTTAATTGTCA 57.525 29.630 0.00 0.00 0.00 3.58
3433 3619 8.925700 GGAAGTTTGTGATTGGATTTAATTGTC 58.074 33.333 0.00 0.00 0.00 3.18
3434 3620 8.428063 TGGAAGTTTGTGATTGGATTTAATTGT 58.572 29.630 0.00 0.00 0.00 2.71
3435 3621 8.711457 GTGGAAGTTTGTGATTGGATTTAATTG 58.289 33.333 0.00 0.00 0.00 2.32
3436 3622 7.598493 CGTGGAAGTTTGTGATTGGATTTAATT 59.402 33.333 0.00 0.00 0.00 1.40
3437 3623 7.090173 CGTGGAAGTTTGTGATTGGATTTAAT 58.910 34.615 0.00 0.00 0.00 1.40
3438 3624 6.039941 ACGTGGAAGTTTGTGATTGGATTTAA 59.960 34.615 0.00 0.00 0.00 1.52
3439 3625 5.533154 ACGTGGAAGTTTGTGATTGGATTTA 59.467 36.000 0.00 0.00 0.00 1.40
3440 3626 4.340950 ACGTGGAAGTTTGTGATTGGATTT 59.659 37.500 0.00 0.00 0.00 2.17
3441 3627 3.888930 ACGTGGAAGTTTGTGATTGGATT 59.111 39.130 0.00 0.00 0.00 3.01
3442 3628 3.486383 ACGTGGAAGTTTGTGATTGGAT 58.514 40.909 0.00 0.00 0.00 3.41
3443 3629 2.875933 GACGTGGAAGTTTGTGATTGGA 59.124 45.455 0.00 0.00 0.00 3.53
3444 3630 2.616376 TGACGTGGAAGTTTGTGATTGG 59.384 45.455 0.00 0.00 0.00 3.16
3445 3631 3.064682 TGTGACGTGGAAGTTTGTGATTG 59.935 43.478 0.00 0.00 0.00 2.67
3446 3632 3.275143 TGTGACGTGGAAGTTTGTGATT 58.725 40.909 0.00 0.00 0.00 2.57
3447 3633 2.912771 TGTGACGTGGAAGTTTGTGAT 58.087 42.857 0.00 0.00 0.00 3.06
3448 3634 2.388310 TGTGACGTGGAAGTTTGTGA 57.612 45.000 0.00 0.00 0.00 3.58
3449 3635 3.691049 AATGTGACGTGGAAGTTTGTG 57.309 42.857 0.00 0.00 0.00 3.33
3450 3636 6.385649 AAATAATGTGACGTGGAAGTTTGT 57.614 33.333 0.00 0.00 0.00 2.83
3451 3637 6.915300 TGAAAATAATGTGACGTGGAAGTTTG 59.085 34.615 0.00 0.00 0.00 2.93
3452 3638 7.033530 TGAAAATAATGTGACGTGGAAGTTT 57.966 32.000 0.00 0.00 0.00 2.66
3453 3639 6.627395 TGAAAATAATGTGACGTGGAAGTT 57.373 33.333 0.00 0.00 0.00 2.66
3454 3640 6.262273 ACTTGAAAATAATGTGACGTGGAAGT 59.738 34.615 0.00 0.00 0.00 3.01
3455 3641 6.668323 ACTTGAAAATAATGTGACGTGGAAG 58.332 36.000 0.00 0.00 0.00 3.46
3456 3642 6.261158 TGACTTGAAAATAATGTGACGTGGAA 59.739 34.615 0.00 0.00 0.00 3.53
3457 3643 5.760743 TGACTTGAAAATAATGTGACGTGGA 59.239 36.000 0.00 0.00 0.00 4.02
3458 3644 5.996219 TGACTTGAAAATAATGTGACGTGG 58.004 37.500 0.00 0.00 0.00 4.94
3459 3645 6.359617 GGTTGACTTGAAAATAATGTGACGTG 59.640 38.462 0.00 0.00 0.00 4.49
3460 3646 6.262273 AGGTTGACTTGAAAATAATGTGACGT 59.738 34.615 0.00 0.00 0.00 4.34
3461 3647 6.668323 AGGTTGACTTGAAAATAATGTGACG 58.332 36.000 0.00 0.00 0.00 4.35
3469 3655 9.528489 AGGCTTTTATAGGTTGACTTGAAAATA 57.472 29.630 0.00 0.00 0.00 1.40
3470 3656 8.306761 CAGGCTTTTATAGGTTGACTTGAAAAT 58.693 33.333 0.00 0.00 0.00 1.82
3471 3657 7.286775 ACAGGCTTTTATAGGTTGACTTGAAAA 59.713 33.333 0.00 0.00 0.00 2.29
3472 3658 6.775629 ACAGGCTTTTATAGGTTGACTTGAAA 59.224 34.615 0.00 0.00 0.00 2.69
3473 3659 6.303839 ACAGGCTTTTATAGGTTGACTTGAA 58.696 36.000 0.00 0.00 0.00 2.69
3474 3660 5.876357 ACAGGCTTTTATAGGTTGACTTGA 58.124 37.500 0.00 0.00 0.00 3.02
3475 3661 7.865706 ATACAGGCTTTTATAGGTTGACTTG 57.134 36.000 0.00 0.00 0.00 3.16
3477 3663 9.780186 GATTATACAGGCTTTTATAGGTTGACT 57.220 33.333 0.00 0.00 0.00 3.41
3478 3664 9.000486 GGATTATACAGGCTTTTATAGGTTGAC 58.000 37.037 0.00 0.00 0.00 3.18
3479 3665 8.945193 AGGATTATACAGGCTTTTATAGGTTGA 58.055 33.333 0.00 0.00 0.00 3.18
3480 3666 9.003658 CAGGATTATACAGGCTTTTATAGGTTG 57.996 37.037 0.00 0.00 0.00 3.77
3481 3667 8.724310 ACAGGATTATACAGGCTTTTATAGGTT 58.276 33.333 0.00 0.00 0.00 3.50
3482 3668 8.276453 ACAGGATTATACAGGCTTTTATAGGT 57.724 34.615 0.00 0.00 0.00 3.08
3483 3669 9.654663 GTACAGGATTATACAGGCTTTTATAGG 57.345 37.037 0.00 0.00 0.00 2.57
3484 3670 9.355215 CGTACAGGATTATACAGGCTTTTATAG 57.645 37.037 0.00 0.00 0.00 1.31
3485 3671 8.308931 CCGTACAGGATTATACAGGCTTTTATA 58.691 37.037 0.00 0.00 45.00 0.98
3486 3672 7.159372 CCGTACAGGATTATACAGGCTTTTAT 58.841 38.462 0.00 0.00 45.00 1.40
3487 3673 6.463331 CCCGTACAGGATTATACAGGCTTTTA 60.463 42.308 5.46 0.00 45.00 1.52
3488 3674 5.365619 CCGTACAGGATTATACAGGCTTTT 58.634 41.667 0.00 0.00 45.00 2.27
3489 3675 4.202326 CCCGTACAGGATTATACAGGCTTT 60.202 45.833 5.46 0.00 45.00 3.51
3490 3676 3.323979 CCCGTACAGGATTATACAGGCTT 59.676 47.826 5.46 0.00 45.00 4.35
3491 3677 2.897969 CCCGTACAGGATTATACAGGCT 59.102 50.000 5.46 0.00 45.00 4.58
3492 3678 2.631545 ACCCGTACAGGATTATACAGGC 59.368 50.000 0.99 0.00 45.00 4.85
3493 3679 4.082354 GCTACCCGTACAGGATTATACAGG 60.082 50.000 0.99 0.00 45.00 4.00
3494 3680 4.521639 TGCTACCCGTACAGGATTATACAG 59.478 45.833 0.99 0.00 45.00 2.74
3495 3681 4.472496 TGCTACCCGTACAGGATTATACA 58.528 43.478 0.99 0.00 45.00 2.29
3496 3682 5.656213 ATGCTACCCGTACAGGATTATAC 57.344 43.478 0.99 0.00 45.00 1.47
3497 3683 7.966339 ATAATGCTACCCGTACAGGATTATA 57.034 36.000 12.89 0.00 41.31 0.98
3498 3684 6.869206 ATAATGCTACCCGTACAGGATTAT 57.131 37.500 0.99 6.95 45.00 1.28
3499 3685 6.042322 ACAATAATGCTACCCGTACAGGATTA 59.958 38.462 0.99 4.87 45.00 1.75
3500 3686 5.163237 ACAATAATGCTACCCGTACAGGATT 60.163 40.000 0.99 2.67 45.00 3.01
3501 3687 4.347000 ACAATAATGCTACCCGTACAGGAT 59.653 41.667 0.99 0.00 45.00 3.24
3502 3688 3.707611 ACAATAATGCTACCCGTACAGGA 59.292 43.478 0.99 0.00 45.00 3.86
3503 3689 4.067972 ACAATAATGCTACCCGTACAGG 57.932 45.455 0.00 0.00 40.63 4.00
3504 3690 5.220777 CCAAACAATAATGCTACCCGTACAG 60.221 44.000 0.00 0.00 0.00 2.74
3505 3691 4.636648 CCAAACAATAATGCTACCCGTACA 59.363 41.667 0.00 0.00 0.00 2.90
3506 3692 4.496840 GCCAAACAATAATGCTACCCGTAC 60.497 45.833 0.00 0.00 0.00 3.67
3507 3693 3.628487 GCCAAACAATAATGCTACCCGTA 59.372 43.478 0.00 0.00 0.00 4.02
3508 3694 2.425668 GCCAAACAATAATGCTACCCGT 59.574 45.455 0.00 0.00 0.00 5.28
3509 3695 2.540769 CGCCAAACAATAATGCTACCCG 60.541 50.000 0.00 0.00 0.00 5.28
3510 3696 2.425668 ACGCCAAACAATAATGCTACCC 59.574 45.455 0.00 0.00 0.00 3.69
3511 3697 3.775661 ACGCCAAACAATAATGCTACC 57.224 42.857 0.00 0.00 0.00 3.18
3512 3698 4.095185 TGGTACGCCAAACAATAATGCTAC 59.905 41.667 0.00 0.00 42.83 3.58
3513 3699 4.262617 TGGTACGCCAAACAATAATGCTA 58.737 39.130 0.00 0.00 42.83 3.49
3514 3700 3.085533 TGGTACGCCAAACAATAATGCT 58.914 40.909 0.00 0.00 42.83 3.79
3515 3701 3.495670 TGGTACGCCAAACAATAATGC 57.504 42.857 0.00 0.00 42.83 3.56
3530 3716 4.710167 GTGGTGGGGGCGTGGTAC 62.710 72.222 0.00 0.00 0.00 3.34
3537 3723 0.757935 TATAGTCTCGTGGTGGGGGC 60.758 60.000 0.00 0.00 0.00 5.80
3538 3724 1.329256 CTATAGTCTCGTGGTGGGGG 58.671 60.000 0.00 0.00 0.00 5.40
3539 3725 0.674534 GCTATAGTCTCGTGGTGGGG 59.325 60.000 0.84 0.00 0.00 4.96
3540 3726 1.693627 AGCTATAGTCTCGTGGTGGG 58.306 55.000 0.84 0.00 0.00 4.61
3541 3727 2.226912 GCTAGCTATAGTCTCGTGGTGG 59.773 54.545 7.70 0.00 0.00 4.61
3542 3728 2.096169 CGCTAGCTATAGTCTCGTGGTG 60.096 54.545 13.93 0.00 0.00 4.17
3543 3729 2.144730 CGCTAGCTATAGTCTCGTGGT 58.855 52.381 13.93 0.00 0.00 4.16
3544 3730 1.135916 GCGCTAGCTATAGTCTCGTGG 60.136 57.143 13.93 0.00 41.01 4.94
3545 3731 2.235238 GCGCTAGCTATAGTCTCGTG 57.765 55.000 13.93 3.80 41.01 4.35
3559 3745 3.849951 GGGTGGCTAGCAGCGCTA 61.850 66.667 18.24 9.37 43.62 4.26
3564 3750 3.694058 CTGGCAGGGTGGCTAGCAG 62.694 68.421 18.24 0.00 44.10 4.24
3565 3751 3.720601 CTGGCAGGGTGGCTAGCA 61.721 66.667 18.24 0.00 44.10 3.49
3567 3753 4.496336 GGCTGGCAGGGTGGCTAG 62.496 72.222 17.64 0.00 44.10 3.42
3568 3754 3.634157 TAGGCTGGCAGGGTGGCTA 62.634 63.158 17.64 10.08 44.10 3.93
3570 3756 4.803908 GTAGGCTGGCAGGGTGGC 62.804 72.222 17.64 2.93 44.03 5.01
3571 3757 3.011517 AGTAGGCTGGCAGGGTGG 61.012 66.667 17.64 0.00 0.00 4.61
3572 3758 2.129555 AACAGTAGGCTGGCAGGGTG 62.130 60.000 17.64 0.00 46.62 4.61
3573 3759 1.427072 AAACAGTAGGCTGGCAGGGT 61.427 55.000 17.64 0.00 46.62 4.34
3574 3760 0.962356 CAAACAGTAGGCTGGCAGGG 60.962 60.000 17.64 0.00 46.62 4.45
3575 3761 0.250901 ACAAACAGTAGGCTGGCAGG 60.251 55.000 17.64 0.16 46.62 4.85
3576 3762 0.877071 CACAAACAGTAGGCTGGCAG 59.123 55.000 10.94 10.94 46.62 4.85
3577 3763 3.019964 CACAAACAGTAGGCTGGCA 57.980 52.632 3.38 0.00 46.62 4.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.