Multiple sequence alignment - TraesCS3B01G116900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G116900 chr3B 100.000 5134 0 0 1 5134 83880992 83886125 0.000000e+00 9481
1 TraesCS3B01G116900 chr3B 83.599 689 74 18 1120 1798 82453070 82452411 1.220000e-170 610
2 TraesCS3B01G116900 chr3B 82.196 601 75 14 1792 2389 82447174 82446603 5.970000e-134 488
3 TraesCS3B01G116900 chr3B 93.190 279 17 1 207 485 108739266 108739542 4.790000e-110 409
4 TraesCS3B01G116900 chr3A 94.376 3823 170 24 540 4338 64778652 64782453 0.000000e+00 5827
5 TraesCS3B01G116900 chr3A 93.636 220 9 4 4303 4519 64782453 64782670 1.780000e-84 324
6 TraesCS3B01G116900 chr3A 92.891 211 13 2 4926 5134 64782925 64783135 6.460000e-79 305
7 TraesCS3B01G116900 chr3D 92.799 2472 113 19 2690 5127 53464983 53467423 0.000000e+00 3518
8 TraesCS3B01G116900 chr3D 93.747 2159 124 7 536 2691 53462672 53464822 0.000000e+00 3229
9 TraesCS3B01G116900 chr3D 92.832 279 20 0 207 485 359589377 359589099 6.190000e-109 405
10 TraesCS3B01G116900 chr5B 92.832 279 18 1 207 485 495582141 495581865 2.230000e-108 403
11 TraesCS3B01G116900 chr5B 92.500 280 21 0 206 485 696315020 696314741 8.010000e-108 401
12 TraesCS3B01G116900 chr6D 92.500 280 21 0 206 485 380285814 380286093 8.010000e-108 401
13 TraesCS3B01G116900 chr4D 92.500 280 19 2 207 485 36577847 36578125 2.880000e-107 399
14 TraesCS3B01G116900 chr1B 92.727 275 20 0 209 483 100713757 100713483 1.040000e-106 398
15 TraesCS3B01G116900 chr1B 92.473 279 19 1 207 485 137730853 137730577 1.040000e-106 398
16 TraesCS3B01G116900 chr1B 92.115 279 20 1 207 485 106526298 106526022 4.820000e-105 392
17 TraesCS3B01G116900 chr1B 89.011 182 15 3 4338 4519 570842207 570842031 2.410000e-53 220
18 TraesCS3B01G116900 chr1D 85.263 380 45 6 4513 4888 421881762 421881390 1.040000e-101 381
19 TraesCS3B01G116900 chr1D 87.912 182 17 3 4338 4519 421882427 421882251 5.210000e-50 209
20 TraesCS3B01G116900 chr1A 87.363 182 18 3 4338 4519 517896090 517895914 2.420000e-48 204


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G116900 chr3B 83880992 83886125 5133 False 9481.0 9481 100.000000 1 5134 1 chr3B.!!$F1 5133
1 TraesCS3B01G116900 chr3B 82452411 82453070 659 True 610.0 610 83.599000 1120 1798 1 chr3B.!!$R2 678
2 TraesCS3B01G116900 chr3B 82446603 82447174 571 True 488.0 488 82.196000 1792 2389 1 chr3B.!!$R1 597
3 TraesCS3B01G116900 chr3A 64778652 64783135 4483 False 2152.0 5827 93.634333 540 5134 3 chr3A.!!$F1 4594
4 TraesCS3B01G116900 chr3D 53462672 53467423 4751 False 3373.5 3518 93.273000 536 5127 2 chr3D.!!$F1 4591
5 TraesCS3B01G116900 chr1D 421881390 421882427 1037 True 295.0 381 86.587500 4338 4888 2 chr1D.!!$R1 550

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
143 144 0.178767 CAAGGCATCCATCGGTCTCA 59.821 55.0 0.00 0.0 0.00 3.27 F
144 145 0.179000 AAGGCATCCATCGGTCTCAC 59.821 55.0 0.00 0.0 0.00 3.51 F
1651 1675 0.250727 TCGAGGTTGCTTTGGGGAAG 60.251 55.0 0.00 0.0 38.45 3.46 F
1665 1689 2.224769 TGGGGAAGAATGGAACTGTGTC 60.225 50.0 0.00 0.0 0.00 3.67 F
3135 3329 0.673644 CCACTTGAGCCAAGGTACCG 60.674 60.0 6.18 0.0 44.81 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1480 1496 1.002134 AATGGAGGACACGCCCTTG 60.002 57.895 0.00 0.00 36.49 3.61 R
1749 1774 1.203441 AGCCTGTCAGCCTCATCCAA 61.203 55.000 0.00 0.00 0.00 3.53 R
2529 2556 1.048601 ACGTGGGCCCTACATATGAG 58.951 55.000 25.70 8.05 0.00 2.90 R
3188 3382 1.933005 GCAGCTGCTCTAATCTGCG 59.067 57.895 31.33 0.00 41.80 5.18 R
4809 5569 0.381801 CCGCCGCATATTTCTTTGCT 59.618 50.000 0.00 0.00 36.71 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.568000 AGCTCACAACACACAACCA 57.432 47.368 0.00 0.00 0.00 3.67
19 20 1.094785 AGCTCACAACACACAACCAC 58.905 50.000 0.00 0.00 0.00 4.16
20 21 0.808125 GCTCACAACACACAACCACA 59.192 50.000 0.00 0.00 0.00 4.17
21 22 1.405105 GCTCACAACACACAACCACAT 59.595 47.619 0.00 0.00 0.00 3.21
22 23 2.795681 GCTCACAACACACAACCACATG 60.796 50.000 0.00 0.00 0.00 3.21
23 24 2.682352 CTCACAACACACAACCACATGA 59.318 45.455 0.00 0.00 0.00 3.07
24 25 3.084786 TCACAACACACAACCACATGAA 58.915 40.909 0.00 0.00 0.00 2.57
25 26 3.507622 TCACAACACACAACCACATGAAA 59.492 39.130 0.00 0.00 0.00 2.69
26 27 3.611986 CACAACACACAACCACATGAAAC 59.388 43.478 0.00 0.00 0.00 2.78
27 28 3.509575 ACAACACACAACCACATGAAACT 59.490 39.130 0.00 0.00 0.00 2.66
28 29 4.104776 CAACACACAACCACATGAAACTC 58.895 43.478 0.00 0.00 0.00 3.01
29 30 3.351740 ACACACAACCACATGAAACTCA 58.648 40.909 0.00 0.00 0.00 3.41
30 31 3.378112 ACACACAACCACATGAAACTCAG 59.622 43.478 0.00 0.00 0.00 3.35
31 32 2.358898 ACACAACCACATGAAACTCAGC 59.641 45.455 0.00 0.00 0.00 4.26
32 33 2.620115 CACAACCACATGAAACTCAGCT 59.380 45.455 0.00 0.00 0.00 4.24
33 34 3.814842 CACAACCACATGAAACTCAGCTA 59.185 43.478 0.00 0.00 0.00 3.32
34 35 3.815401 ACAACCACATGAAACTCAGCTAC 59.185 43.478 0.00 0.00 0.00 3.58
35 36 2.688507 ACCACATGAAACTCAGCTACG 58.311 47.619 0.00 0.00 0.00 3.51
36 37 2.037251 ACCACATGAAACTCAGCTACGT 59.963 45.455 0.00 0.00 0.00 3.57
37 38 3.067106 CCACATGAAACTCAGCTACGTT 58.933 45.455 0.00 0.00 0.00 3.99
38 39 3.498397 CCACATGAAACTCAGCTACGTTT 59.502 43.478 11.13 11.13 36.16 3.60
39 40 4.457810 CACATGAAACTCAGCTACGTTTG 58.542 43.478 14.94 6.60 33.82 2.93
40 41 4.024893 CACATGAAACTCAGCTACGTTTGT 60.025 41.667 14.94 7.11 33.82 2.83
41 42 4.211374 ACATGAAACTCAGCTACGTTTGTC 59.789 41.667 14.94 5.14 33.82 3.18
42 43 4.054780 TGAAACTCAGCTACGTTTGTCT 57.945 40.909 14.94 0.00 33.82 3.41
43 44 4.049186 TGAAACTCAGCTACGTTTGTCTC 58.951 43.478 14.94 4.29 33.82 3.36
44 45 3.728076 AACTCAGCTACGTTTGTCTCA 57.272 42.857 0.00 0.00 0.00 3.27
45 46 3.728076 ACTCAGCTACGTTTGTCTCAA 57.272 42.857 0.00 0.00 0.00 3.02
46 47 4.054780 ACTCAGCTACGTTTGTCTCAAA 57.945 40.909 0.00 0.00 0.00 2.69
47 48 4.439057 ACTCAGCTACGTTTGTCTCAAAA 58.561 39.130 0.00 0.00 0.00 2.44
48 49 4.873827 ACTCAGCTACGTTTGTCTCAAAAA 59.126 37.500 0.00 0.00 0.00 1.94
68 69 4.823790 AAAAATGAAACTCGGCTACGTT 57.176 36.364 0.00 0.00 41.85 3.99
69 70 3.806316 AAATGAAACTCGGCTACGTTG 57.194 42.857 0.00 0.00 41.85 4.10
70 71 1.076332 ATGAAACTCGGCTACGTTGC 58.924 50.000 13.81 13.81 41.85 4.17
98 99 3.455619 AAAATGAAACTCAGCTACGCG 57.544 42.857 3.53 3.53 0.00 6.01
99 100 0.721718 AATGAAACTCAGCTACGCGC 59.278 50.000 5.73 0.00 39.57 6.86
100 101 0.389817 ATGAAACTCAGCTACGCGCA 60.390 50.000 5.73 0.00 42.61 6.09
101 102 0.598942 TGAAACTCAGCTACGCGCAA 60.599 50.000 5.73 0.00 42.61 4.85
102 103 0.511221 GAAACTCAGCTACGCGCAAA 59.489 50.000 5.73 0.00 42.61 3.68
103 104 0.941542 AAACTCAGCTACGCGCAAAA 59.058 45.000 5.73 0.00 42.61 2.44
104 105 0.941542 AACTCAGCTACGCGCAAAAA 59.058 45.000 5.73 0.00 42.61 1.94
124 125 4.866682 AAAGCTAAATCTCGCTAACAGC 57.133 40.909 0.00 0.00 34.96 4.40
125 126 3.526931 AGCTAAATCTCGCTAACAGCA 57.473 42.857 0.00 0.00 42.58 4.41
126 127 3.861840 AGCTAAATCTCGCTAACAGCAA 58.138 40.909 0.00 0.00 42.58 3.91
127 128 3.868077 AGCTAAATCTCGCTAACAGCAAG 59.132 43.478 0.00 0.00 42.58 4.01
128 129 3.001736 GCTAAATCTCGCTAACAGCAAGG 59.998 47.826 0.00 0.00 42.58 3.61
129 130 1.373570 AATCTCGCTAACAGCAAGGC 58.626 50.000 0.00 0.00 42.58 4.35
130 131 0.250234 ATCTCGCTAACAGCAAGGCA 59.750 50.000 0.00 0.00 42.58 4.75
131 132 0.250234 TCTCGCTAACAGCAAGGCAT 59.750 50.000 0.00 0.00 42.58 4.40
132 133 0.654683 CTCGCTAACAGCAAGGCATC 59.345 55.000 0.00 0.00 42.58 3.91
133 134 0.744414 TCGCTAACAGCAAGGCATCC 60.744 55.000 0.00 0.00 42.58 3.51
134 135 1.026182 CGCTAACAGCAAGGCATCCA 61.026 55.000 0.00 0.00 42.58 3.41
135 136 1.396653 GCTAACAGCAAGGCATCCAT 58.603 50.000 0.00 0.00 41.89 3.41
136 137 1.336125 GCTAACAGCAAGGCATCCATC 59.664 52.381 0.00 0.00 41.89 3.51
137 138 1.600957 CTAACAGCAAGGCATCCATCG 59.399 52.381 0.00 0.00 0.00 3.84
138 139 1.033746 AACAGCAAGGCATCCATCGG 61.034 55.000 0.00 0.00 0.00 4.18
139 140 1.452651 CAGCAAGGCATCCATCGGT 60.453 57.895 0.00 0.00 0.00 4.69
140 141 1.153086 AGCAAGGCATCCATCGGTC 60.153 57.895 0.00 0.00 0.00 4.79
141 142 1.153086 GCAAGGCATCCATCGGTCT 60.153 57.895 0.00 0.00 0.00 3.85
142 143 1.162800 GCAAGGCATCCATCGGTCTC 61.163 60.000 0.00 0.00 0.00 3.36
143 144 0.178767 CAAGGCATCCATCGGTCTCA 59.821 55.000 0.00 0.00 0.00 3.27
144 145 0.179000 AAGGCATCCATCGGTCTCAC 59.821 55.000 0.00 0.00 0.00 3.51
145 146 1.227674 GGCATCCATCGGTCTCACC 60.228 63.158 0.00 0.00 34.05 4.02
146 147 1.690219 GGCATCCATCGGTCTCACCT 61.690 60.000 0.00 0.00 35.66 4.00
147 148 1.040646 GCATCCATCGGTCTCACCTA 58.959 55.000 0.00 0.00 35.66 3.08
148 149 1.269831 GCATCCATCGGTCTCACCTAC 60.270 57.143 0.00 0.00 35.66 3.18
149 150 2.031870 CATCCATCGGTCTCACCTACA 58.968 52.381 0.00 0.00 35.66 2.74
150 151 1.763968 TCCATCGGTCTCACCTACAG 58.236 55.000 0.00 0.00 35.66 2.74
151 152 0.747255 CCATCGGTCTCACCTACAGG 59.253 60.000 0.00 0.00 35.66 4.00
152 153 0.747255 CATCGGTCTCACCTACAGGG 59.253 60.000 0.00 0.00 40.27 4.45
153 154 0.629596 ATCGGTCTCACCTACAGGGA 59.370 55.000 0.00 0.00 40.27 4.20
154 155 0.629596 TCGGTCTCACCTACAGGGAT 59.370 55.000 0.00 0.00 40.27 3.85
155 156 1.033574 CGGTCTCACCTACAGGGATC 58.966 60.000 0.00 0.00 40.27 3.36
156 157 1.033574 GGTCTCACCTACAGGGATCG 58.966 60.000 0.00 0.00 40.27 3.69
157 158 1.409802 GGTCTCACCTACAGGGATCGA 60.410 57.143 0.00 0.00 40.27 3.59
158 159 2.588620 GTCTCACCTACAGGGATCGAT 58.411 52.381 0.00 0.00 40.27 3.59
159 160 2.294791 GTCTCACCTACAGGGATCGATG 59.705 54.545 0.54 0.00 40.27 3.84
160 161 2.174854 TCTCACCTACAGGGATCGATGA 59.825 50.000 0.54 0.00 40.27 2.92
161 162 2.959030 CTCACCTACAGGGATCGATGAA 59.041 50.000 0.54 0.00 40.27 2.57
162 163 2.959030 TCACCTACAGGGATCGATGAAG 59.041 50.000 0.54 0.00 40.27 3.02
163 164 2.695666 CACCTACAGGGATCGATGAAGT 59.304 50.000 0.54 0.00 40.27 3.01
164 165 2.695666 ACCTACAGGGATCGATGAAGTG 59.304 50.000 0.54 0.00 40.27 3.16
165 166 2.695666 CCTACAGGGATCGATGAAGTGT 59.304 50.000 0.54 3.59 37.23 3.55
166 167 2.680312 ACAGGGATCGATGAAGTGTG 57.320 50.000 0.54 0.00 0.00 3.82
167 168 1.293924 CAGGGATCGATGAAGTGTGC 58.706 55.000 0.54 0.00 0.00 4.57
168 169 1.134580 CAGGGATCGATGAAGTGTGCT 60.135 52.381 0.54 0.00 0.00 4.40
169 170 1.134580 AGGGATCGATGAAGTGTGCTG 60.135 52.381 0.54 0.00 0.00 4.41
170 171 1.134699 GGGATCGATGAAGTGTGCTGA 60.135 52.381 0.54 0.00 0.00 4.26
171 172 1.929836 GGATCGATGAAGTGTGCTGAC 59.070 52.381 0.54 0.00 0.00 3.51
172 173 2.417924 GGATCGATGAAGTGTGCTGACT 60.418 50.000 0.54 0.00 0.00 3.41
173 174 2.070262 TCGATGAAGTGTGCTGACTG 57.930 50.000 0.00 0.00 0.00 3.51
174 175 1.613437 TCGATGAAGTGTGCTGACTGA 59.387 47.619 0.00 0.00 0.00 3.41
175 176 2.035832 TCGATGAAGTGTGCTGACTGAA 59.964 45.455 0.00 0.00 0.00 3.02
176 177 2.998670 CGATGAAGTGTGCTGACTGAAT 59.001 45.455 0.00 0.00 0.00 2.57
177 178 4.082245 TCGATGAAGTGTGCTGACTGAATA 60.082 41.667 0.00 0.00 0.00 1.75
178 179 4.627035 CGATGAAGTGTGCTGACTGAATAA 59.373 41.667 0.00 0.00 0.00 1.40
179 180 5.220359 CGATGAAGTGTGCTGACTGAATAAG 60.220 44.000 0.00 0.00 0.00 1.73
180 181 4.960938 TGAAGTGTGCTGACTGAATAAGT 58.039 39.130 0.00 0.00 43.85 2.24
181 182 4.751600 TGAAGTGTGCTGACTGAATAAGTG 59.248 41.667 0.00 0.00 40.07 3.16
182 183 4.342862 AGTGTGCTGACTGAATAAGTGT 57.657 40.909 0.00 0.00 40.07 3.55
183 184 4.060900 AGTGTGCTGACTGAATAAGTGTG 58.939 43.478 0.00 0.00 40.07 3.82
184 185 4.058124 GTGTGCTGACTGAATAAGTGTGA 58.942 43.478 0.00 0.00 40.07 3.58
185 186 4.692625 GTGTGCTGACTGAATAAGTGTGAT 59.307 41.667 0.00 0.00 40.07 3.06
186 187 5.869344 GTGTGCTGACTGAATAAGTGTGATA 59.131 40.000 0.00 0.00 40.07 2.15
187 188 5.869344 TGTGCTGACTGAATAAGTGTGATAC 59.131 40.000 0.00 0.00 40.07 2.24
188 189 5.292101 GTGCTGACTGAATAAGTGTGATACC 59.708 44.000 0.00 0.00 40.07 2.73
189 190 4.504461 GCTGACTGAATAAGTGTGATACCG 59.496 45.833 0.00 0.00 40.07 4.02
190 191 5.678871 GCTGACTGAATAAGTGTGATACCGA 60.679 44.000 0.00 0.00 40.07 4.69
191 192 5.891451 TGACTGAATAAGTGTGATACCGAG 58.109 41.667 0.00 0.00 40.07 4.63
192 193 4.683832 ACTGAATAAGTGTGATACCGAGC 58.316 43.478 0.00 0.00 37.88 5.03
193 194 4.051922 CTGAATAAGTGTGATACCGAGCC 58.948 47.826 0.00 0.00 0.00 4.70
194 195 3.704566 TGAATAAGTGTGATACCGAGCCT 59.295 43.478 0.00 0.00 0.00 4.58
195 196 4.161565 TGAATAAGTGTGATACCGAGCCTT 59.838 41.667 0.00 0.00 0.00 4.35
196 197 4.755266 ATAAGTGTGATACCGAGCCTTT 57.245 40.909 0.00 0.00 0.00 3.11
197 198 3.418684 AAGTGTGATACCGAGCCTTTT 57.581 42.857 0.00 0.00 0.00 2.27
198 199 3.418684 AGTGTGATACCGAGCCTTTTT 57.581 42.857 0.00 0.00 0.00 1.94
199 200 3.074412 AGTGTGATACCGAGCCTTTTTG 58.926 45.455 0.00 0.00 0.00 2.44
200 201 2.161609 GTGTGATACCGAGCCTTTTTGG 59.838 50.000 0.00 0.00 39.35 3.28
201 202 1.743394 GTGATACCGAGCCTTTTTGGG 59.257 52.381 0.00 0.00 36.00 4.12
202 203 1.631388 TGATACCGAGCCTTTTTGGGA 59.369 47.619 0.00 0.00 36.00 4.37
203 204 2.040545 TGATACCGAGCCTTTTTGGGAA 59.959 45.455 0.00 0.00 36.00 3.97
204 205 2.194201 TACCGAGCCTTTTTGGGAAG 57.806 50.000 0.00 0.00 36.00 3.46
205 206 1.179174 ACCGAGCCTTTTTGGGAAGC 61.179 55.000 0.00 0.00 36.00 3.86
206 207 0.895559 CCGAGCCTTTTTGGGAAGCT 60.896 55.000 0.00 0.00 36.00 3.74
207 208 0.961753 CGAGCCTTTTTGGGAAGCTT 59.038 50.000 0.00 0.00 36.00 3.74
208 209 2.159382 CGAGCCTTTTTGGGAAGCTTA 58.841 47.619 0.00 0.00 36.00 3.09
209 210 2.162408 CGAGCCTTTTTGGGAAGCTTAG 59.838 50.000 0.00 0.00 36.00 2.18
210 211 3.421844 GAGCCTTTTTGGGAAGCTTAGA 58.578 45.455 0.00 0.00 36.00 2.10
211 212 3.157881 AGCCTTTTTGGGAAGCTTAGAC 58.842 45.455 0.00 0.00 36.00 2.59
212 213 3.157881 GCCTTTTTGGGAAGCTTAGACT 58.842 45.455 0.00 0.00 36.00 3.24
213 214 4.042934 AGCCTTTTTGGGAAGCTTAGACTA 59.957 41.667 0.00 0.00 36.00 2.59
214 215 4.396478 GCCTTTTTGGGAAGCTTAGACTAG 59.604 45.833 0.00 0.00 36.00 2.57
215 216 4.396478 CCTTTTTGGGAAGCTTAGACTAGC 59.604 45.833 0.00 0.00 41.53 3.42
216 217 3.629142 TTTGGGAAGCTTAGACTAGCC 57.371 47.619 0.00 0.00 42.20 3.93
217 218 2.247699 TGGGAAGCTTAGACTAGCCA 57.752 50.000 0.00 0.00 42.20 4.75
218 219 1.831736 TGGGAAGCTTAGACTAGCCAC 59.168 52.381 0.00 0.00 42.20 5.01
219 220 1.831736 GGGAAGCTTAGACTAGCCACA 59.168 52.381 0.00 0.00 42.20 4.17
220 221 2.236395 GGGAAGCTTAGACTAGCCACAA 59.764 50.000 0.00 0.00 42.20 3.33
221 222 3.118223 GGGAAGCTTAGACTAGCCACAAT 60.118 47.826 0.00 0.00 42.20 2.71
222 223 3.873952 GGAAGCTTAGACTAGCCACAATG 59.126 47.826 0.00 0.00 42.20 2.82
223 224 4.383118 GGAAGCTTAGACTAGCCACAATGA 60.383 45.833 0.00 0.00 42.20 2.57
224 225 4.399004 AGCTTAGACTAGCCACAATGAG 57.601 45.455 0.00 0.00 42.20 2.90
225 226 4.026744 AGCTTAGACTAGCCACAATGAGA 58.973 43.478 0.00 0.00 42.20 3.27
226 227 4.099266 AGCTTAGACTAGCCACAATGAGAG 59.901 45.833 0.00 0.00 42.20 3.20
227 228 4.142049 GCTTAGACTAGCCACAATGAGAGT 60.142 45.833 0.00 0.00 35.06 3.24
228 229 5.067936 GCTTAGACTAGCCACAATGAGAGTA 59.932 44.000 0.00 0.00 35.06 2.59
229 230 6.405953 GCTTAGACTAGCCACAATGAGAGTAA 60.406 42.308 0.00 0.00 35.06 2.24
230 231 5.331876 AGACTAGCCACAATGAGAGTAAC 57.668 43.478 0.00 0.00 0.00 2.50
231 232 5.020132 AGACTAGCCACAATGAGAGTAACT 58.980 41.667 0.00 0.00 0.00 2.24
232 233 5.482175 AGACTAGCCACAATGAGAGTAACTT 59.518 40.000 0.00 0.00 0.00 2.66
233 234 5.725362 ACTAGCCACAATGAGAGTAACTTC 58.275 41.667 0.00 0.00 0.00 3.01
234 235 4.623932 AGCCACAATGAGAGTAACTTCA 57.376 40.909 0.00 0.00 0.00 3.02
235 236 4.573900 AGCCACAATGAGAGTAACTTCAG 58.426 43.478 0.00 0.00 0.00 3.02
236 237 4.040952 AGCCACAATGAGAGTAACTTCAGT 59.959 41.667 0.00 0.00 0.00 3.41
237 238 5.246203 AGCCACAATGAGAGTAACTTCAGTA 59.754 40.000 0.00 0.00 0.00 2.74
238 239 5.348997 GCCACAATGAGAGTAACTTCAGTAC 59.651 44.000 0.00 0.00 0.00 2.73
239 240 6.692486 CCACAATGAGAGTAACTTCAGTACT 58.308 40.000 0.00 0.00 0.00 2.73
240 241 7.577046 GCCACAATGAGAGTAACTTCAGTACTA 60.577 40.741 0.00 0.00 0.00 1.82
241 242 8.304596 CCACAATGAGAGTAACTTCAGTACTAA 58.695 37.037 0.00 0.00 0.00 2.24
242 243 9.130312 CACAATGAGAGTAACTTCAGTACTAAC 57.870 37.037 0.00 0.00 0.00 2.34
243 244 8.857098 ACAATGAGAGTAACTTCAGTACTAACA 58.143 33.333 0.00 0.00 0.00 2.41
244 245 9.862371 CAATGAGAGTAACTTCAGTACTAACAT 57.138 33.333 0.00 0.00 0.00 2.71
246 247 8.631480 TGAGAGTAACTTCAGTACTAACATCA 57.369 34.615 0.00 0.00 0.00 3.07
247 248 9.074576 TGAGAGTAACTTCAGTACTAACATCAA 57.925 33.333 0.00 0.00 0.00 2.57
248 249 9.562583 GAGAGTAACTTCAGTACTAACATCAAG 57.437 37.037 0.00 0.00 0.00 3.02
249 250 9.080097 AGAGTAACTTCAGTACTAACATCAAGT 57.920 33.333 0.00 0.00 0.00 3.16
250 251 9.344309 GAGTAACTTCAGTACTAACATCAAGTC 57.656 37.037 0.00 0.00 0.00 3.01
251 252 8.305317 AGTAACTTCAGTACTAACATCAAGTCC 58.695 37.037 0.00 0.00 0.00 3.85
252 253 6.665992 ACTTCAGTACTAACATCAAGTCCA 57.334 37.500 0.00 0.00 0.00 4.02
253 254 7.062749 ACTTCAGTACTAACATCAAGTCCAA 57.937 36.000 0.00 0.00 0.00 3.53
254 255 6.929606 ACTTCAGTACTAACATCAAGTCCAAC 59.070 38.462 0.00 0.00 0.00 3.77
255 256 6.665992 TCAGTACTAACATCAAGTCCAACT 57.334 37.500 0.00 0.00 0.00 3.16
256 257 7.770366 TCAGTACTAACATCAAGTCCAACTA 57.230 36.000 0.00 0.00 0.00 2.24
257 258 8.185506 TCAGTACTAACATCAAGTCCAACTAA 57.814 34.615 0.00 0.00 0.00 2.24
258 259 8.644216 TCAGTACTAACATCAAGTCCAACTAAA 58.356 33.333 0.00 0.00 0.00 1.85
259 260 8.709646 CAGTACTAACATCAAGTCCAACTAAAC 58.290 37.037 0.00 0.00 0.00 2.01
260 261 8.426489 AGTACTAACATCAAGTCCAACTAAACA 58.574 33.333 0.00 0.00 0.00 2.83
261 262 9.048446 GTACTAACATCAAGTCCAACTAAACAA 57.952 33.333 0.00 0.00 0.00 2.83
262 263 8.514330 ACTAACATCAAGTCCAACTAAACAAA 57.486 30.769 0.00 0.00 0.00 2.83
263 264 9.131791 ACTAACATCAAGTCCAACTAAACAAAT 57.868 29.630 0.00 0.00 0.00 2.32
264 265 9.965824 CTAACATCAAGTCCAACTAAACAAATT 57.034 29.630 0.00 0.00 0.00 1.82
266 267 8.647143 ACATCAAGTCCAACTAAACAAATTTG 57.353 30.769 16.67 16.67 0.00 2.32
267 268 7.224557 ACATCAAGTCCAACTAAACAAATTTGC 59.775 33.333 18.12 0.00 0.00 3.68
268 269 6.872920 TCAAGTCCAACTAAACAAATTTGCT 58.127 32.000 18.12 2.78 0.00 3.91
269 270 7.327214 TCAAGTCCAACTAAACAAATTTGCTT 58.673 30.769 18.12 14.47 0.00 3.91
270 271 8.470805 TCAAGTCCAACTAAACAAATTTGCTTA 58.529 29.630 18.12 14.83 0.00 3.09
271 272 9.260002 CAAGTCCAACTAAACAAATTTGCTTAT 57.740 29.630 18.12 4.69 0.00 1.73
272 273 8.816640 AGTCCAACTAAACAAATTTGCTTATG 57.183 30.769 18.12 11.74 0.00 1.90
273 274 8.421002 AGTCCAACTAAACAAATTTGCTTATGT 58.579 29.630 18.12 12.44 0.00 2.29
274 275 8.487176 GTCCAACTAAACAAATTTGCTTATGTG 58.513 33.333 18.12 14.78 0.00 3.21
275 276 7.655328 TCCAACTAAACAAATTTGCTTATGTGG 59.345 33.333 22.74 22.74 31.01 4.17
276 277 7.290118 CAACTAAACAAATTTGCTTATGTGGC 58.710 34.615 18.12 0.00 0.00 5.01
277 278 6.520272 ACTAAACAAATTTGCTTATGTGGCA 58.480 32.000 18.12 0.00 37.97 4.92
278 279 6.989169 ACTAAACAAATTTGCTTATGTGGCAA 59.011 30.769 18.12 0.00 46.12 4.52
279 280 6.880942 AAACAAATTTGCTTATGTGGCAAT 57.119 29.167 18.12 0.00 46.81 3.56
280 281 5.866335 ACAAATTTGCTTATGTGGCAATG 57.134 34.783 18.12 1.36 46.81 2.82
281 282 5.549347 ACAAATTTGCTTATGTGGCAATGA 58.451 33.333 18.12 0.00 46.81 2.57
282 283 5.640357 ACAAATTTGCTTATGTGGCAATGAG 59.360 36.000 18.12 0.00 46.81 2.90
283 284 5.410355 AATTTGCTTATGTGGCAATGAGT 57.590 34.783 2.01 0.00 46.81 3.41
284 285 4.870123 TTTGCTTATGTGGCAATGAGTT 57.130 36.364 2.01 0.00 46.81 3.01
285 286 5.973899 TTTGCTTATGTGGCAATGAGTTA 57.026 34.783 2.01 0.00 46.81 2.24
286 287 5.565592 TTGCTTATGTGGCAATGAGTTAG 57.434 39.130 0.00 0.00 43.50 2.34
287 288 4.588899 TGCTTATGTGGCAATGAGTTAGT 58.411 39.130 0.00 0.00 36.71 2.24
288 289 4.395854 TGCTTATGTGGCAATGAGTTAGTG 59.604 41.667 0.00 0.00 36.71 2.74
289 290 4.635765 GCTTATGTGGCAATGAGTTAGTGA 59.364 41.667 0.00 0.00 0.00 3.41
290 291 5.220739 GCTTATGTGGCAATGAGTTAGTGAG 60.221 44.000 0.00 0.00 0.00 3.51
291 292 3.057969 TGTGGCAATGAGTTAGTGAGG 57.942 47.619 0.00 0.00 0.00 3.86
292 293 2.637382 TGTGGCAATGAGTTAGTGAGGA 59.363 45.455 0.00 0.00 0.00 3.71
293 294 3.265791 GTGGCAATGAGTTAGTGAGGAG 58.734 50.000 0.00 0.00 0.00 3.69
294 295 3.055819 GTGGCAATGAGTTAGTGAGGAGA 60.056 47.826 0.00 0.00 0.00 3.71
295 296 3.196469 TGGCAATGAGTTAGTGAGGAGAG 59.804 47.826 0.00 0.00 0.00 3.20
296 297 3.449018 GGCAATGAGTTAGTGAGGAGAGA 59.551 47.826 0.00 0.00 0.00 3.10
297 298 4.441356 GGCAATGAGTTAGTGAGGAGAGAG 60.441 50.000 0.00 0.00 0.00 3.20
298 299 4.441356 GCAATGAGTTAGTGAGGAGAGAGG 60.441 50.000 0.00 0.00 0.00 3.69
299 300 4.601406 ATGAGTTAGTGAGGAGAGAGGT 57.399 45.455 0.00 0.00 0.00 3.85
300 301 5.718801 ATGAGTTAGTGAGGAGAGAGGTA 57.281 43.478 0.00 0.00 0.00 3.08
301 302 5.105567 TGAGTTAGTGAGGAGAGAGGTAG 57.894 47.826 0.00 0.00 0.00 3.18
302 303 4.536888 TGAGTTAGTGAGGAGAGAGGTAGT 59.463 45.833 0.00 0.00 0.00 2.73
303 304 5.014333 TGAGTTAGTGAGGAGAGAGGTAGTT 59.986 44.000 0.00 0.00 0.00 2.24
304 305 5.894653 AGTTAGTGAGGAGAGAGGTAGTTT 58.105 41.667 0.00 0.00 0.00 2.66
305 306 5.712917 AGTTAGTGAGGAGAGAGGTAGTTTG 59.287 44.000 0.00 0.00 0.00 2.93
306 307 4.390129 AGTGAGGAGAGAGGTAGTTTGA 57.610 45.455 0.00 0.00 0.00 2.69
307 308 4.340617 AGTGAGGAGAGAGGTAGTTTGAG 58.659 47.826 0.00 0.00 0.00 3.02
308 309 4.083565 GTGAGGAGAGAGGTAGTTTGAGT 58.916 47.826 0.00 0.00 0.00 3.41
309 310 5.014333 AGTGAGGAGAGAGGTAGTTTGAGTA 59.986 44.000 0.00 0.00 0.00 2.59
310 311 5.711036 GTGAGGAGAGAGGTAGTTTGAGTAA 59.289 44.000 0.00 0.00 0.00 2.24
311 312 5.711036 TGAGGAGAGAGGTAGTTTGAGTAAC 59.289 44.000 0.00 0.00 36.99 2.50
313 314 6.316513 AGGAGAGAGGTAGTTTGAGTAACTT 58.683 40.000 0.00 0.00 44.73 2.66
314 315 7.468496 AGGAGAGAGGTAGTTTGAGTAACTTA 58.532 38.462 0.00 0.00 44.73 2.24
315 316 7.612633 AGGAGAGAGGTAGTTTGAGTAACTTAG 59.387 40.741 0.00 0.00 44.73 2.18
316 317 7.160547 AGAGAGGTAGTTTGAGTAACTTAGC 57.839 40.000 0.00 0.00 44.73 3.09
317 318 6.949463 AGAGAGGTAGTTTGAGTAACTTAGCT 59.051 38.462 0.00 0.00 44.73 3.32
318 319 8.108364 AGAGAGGTAGTTTGAGTAACTTAGCTA 58.892 37.037 0.00 0.00 44.73 3.32
319 320 8.283699 AGAGGTAGTTTGAGTAACTTAGCTAG 57.716 38.462 0.00 0.00 44.73 3.42
320 321 7.889600 AGAGGTAGTTTGAGTAACTTAGCTAGT 59.110 37.037 0.00 0.00 44.73 2.57
321 322 8.419922 AGGTAGTTTGAGTAACTTAGCTAGTT 57.580 34.615 11.59 11.59 44.73 2.24
322 323 9.525826 AGGTAGTTTGAGTAACTTAGCTAGTTA 57.474 33.333 10.09 10.09 44.73 2.24
334 335 8.983307 AACTTAGCTAGTTACTGTAACATCAC 57.017 34.615 27.12 15.70 45.22 3.06
335 336 8.118976 ACTTAGCTAGTTACTGTAACATCACA 57.881 34.615 27.12 10.61 41.07 3.58
336 337 8.750298 ACTTAGCTAGTTACTGTAACATCACAT 58.250 33.333 27.12 11.85 41.07 3.21
337 338 8.926715 TTAGCTAGTTACTGTAACATCACATG 57.073 34.615 27.12 12.57 41.07 3.21
339 340 7.036220 AGCTAGTTACTGTAACATCACATGTC 58.964 38.462 27.12 9.51 44.07 3.06
340 341 7.036220 GCTAGTTACTGTAACATCACATGTCT 58.964 38.462 27.12 9.43 44.07 3.41
341 342 7.221067 GCTAGTTACTGTAACATCACATGTCTC 59.779 40.741 27.12 1.55 44.07 3.36
342 343 6.993079 AGTTACTGTAACATCACATGTCTCA 58.007 36.000 27.12 0.00 44.07 3.27
343 344 7.441836 AGTTACTGTAACATCACATGTCTCAA 58.558 34.615 27.12 0.00 44.07 3.02
344 345 8.097038 AGTTACTGTAACATCACATGTCTCAAT 58.903 33.333 27.12 3.45 44.07 2.57
345 346 6.732531 ACTGTAACATCACATGTCTCAATG 57.267 37.500 0.00 0.45 44.07 2.82
346 347 5.122869 ACTGTAACATCACATGTCTCAATGC 59.877 40.000 0.00 0.00 44.07 3.56
347 348 5.002516 TGTAACATCACATGTCTCAATGCA 58.997 37.500 0.00 0.00 44.07 3.96
348 349 4.430137 AACATCACATGTCTCAATGCAC 57.570 40.909 0.00 0.00 44.07 4.57
349 350 3.682696 ACATCACATGTCTCAATGCACT 58.317 40.909 0.00 0.00 39.92 4.40
350 351 4.835678 ACATCACATGTCTCAATGCACTA 58.164 39.130 0.00 0.00 39.92 2.74
351 352 4.633126 ACATCACATGTCTCAATGCACTAC 59.367 41.667 0.00 0.00 39.92 2.73
352 353 3.253230 TCACATGTCTCAATGCACTACG 58.747 45.455 0.00 0.00 0.00 3.51
353 354 3.056891 TCACATGTCTCAATGCACTACGA 60.057 43.478 0.00 0.00 0.00 3.43
354 355 3.305361 CACATGTCTCAATGCACTACGAG 59.695 47.826 0.00 0.00 0.00 4.18
355 356 3.056536 ACATGTCTCAATGCACTACGAGT 60.057 43.478 0.00 0.00 0.00 4.18
356 357 3.217599 TGTCTCAATGCACTACGAGTC 57.782 47.619 0.00 0.00 0.00 3.36
357 358 2.820197 TGTCTCAATGCACTACGAGTCT 59.180 45.455 0.00 0.00 0.00 3.24
358 359 4.007659 TGTCTCAATGCACTACGAGTCTA 58.992 43.478 0.00 0.00 0.00 2.59
359 360 4.640647 TGTCTCAATGCACTACGAGTCTAT 59.359 41.667 0.00 0.00 0.00 1.98
360 361 5.820947 TGTCTCAATGCACTACGAGTCTATA 59.179 40.000 0.00 0.00 0.00 1.31
361 362 6.317893 TGTCTCAATGCACTACGAGTCTATAA 59.682 38.462 0.00 0.00 0.00 0.98
362 363 6.633634 GTCTCAATGCACTACGAGTCTATAAC 59.366 42.308 0.00 0.00 0.00 1.89
363 364 5.828747 TCAATGCACTACGAGTCTATAACC 58.171 41.667 0.00 0.00 0.00 2.85
364 365 5.593095 TCAATGCACTACGAGTCTATAACCT 59.407 40.000 0.00 0.00 0.00 3.50
365 366 6.769341 TCAATGCACTACGAGTCTATAACCTA 59.231 38.462 0.00 0.00 0.00 3.08
366 367 7.283807 TCAATGCACTACGAGTCTATAACCTAA 59.716 37.037 0.00 0.00 0.00 2.69
367 368 7.762588 ATGCACTACGAGTCTATAACCTAAT 57.237 36.000 0.00 0.00 0.00 1.73
368 369 8.859236 ATGCACTACGAGTCTATAACCTAATA 57.141 34.615 0.00 0.00 0.00 0.98
369 370 8.681486 TGCACTACGAGTCTATAACCTAATAA 57.319 34.615 0.00 0.00 0.00 1.40
370 371 9.123902 TGCACTACGAGTCTATAACCTAATAAA 57.876 33.333 0.00 0.00 0.00 1.40
393 394 8.970691 AAATAAAGCTTTGTATGACATCACAC 57.029 30.769 22.02 0.00 0.00 3.82
394 395 7.928307 ATAAAGCTTTGTATGACATCACACT 57.072 32.000 22.02 0.00 0.00 3.55
395 396 6.639632 AAAGCTTTGTATGACATCACACTT 57.360 33.333 11.80 0.00 0.00 3.16
396 397 7.744087 AAAGCTTTGTATGACATCACACTTA 57.256 32.000 11.80 0.00 0.00 2.24
397 398 7.928307 AAGCTTTGTATGACATCACACTTAT 57.072 32.000 0.00 0.00 0.00 1.73
398 399 9.448438 AAAGCTTTGTATGACATCACACTTATA 57.552 29.630 11.80 0.00 0.00 0.98
399 400 9.618890 AAGCTTTGTATGACATCACACTTATAT 57.381 29.630 0.00 0.00 0.00 0.86
400 401 9.618890 AGCTTTGTATGACATCACACTTATATT 57.381 29.630 0.00 0.00 0.00 1.28
408 409 8.541899 TGACATCACACTTATATTACTACCCA 57.458 34.615 0.00 0.00 0.00 4.51
409 410 9.154632 TGACATCACACTTATATTACTACCCAT 57.845 33.333 0.00 0.00 0.00 4.00
410 411 9.998106 GACATCACACTTATATTACTACCCATT 57.002 33.333 0.00 0.00 0.00 3.16
414 415 9.353431 TCACACTTATATTACTACCCATTACGA 57.647 33.333 0.00 0.00 0.00 3.43
415 416 9.970395 CACACTTATATTACTACCCATTACGAA 57.030 33.333 0.00 0.00 0.00 3.85
453 454 9.742144 AGTCTAGGGATATGTGTATGTTACTAG 57.258 37.037 0.00 0.00 0.00 2.57
454 455 8.460428 GTCTAGGGATATGTGTATGTTACTAGC 58.540 40.741 0.00 0.00 0.00 3.42
455 456 6.268825 AGGGATATGTGTATGTTACTAGCG 57.731 41.667 0.00 0.00 0.00 4.26
456 457 5.773680 AGGGATATGTGTATGTTACTAGCGT 59.226 40.000 0.00 0.00 0.00 5.07
457 458 6.944290 AGGGATATGTGTATGTTACTAGCGTA 59.056 38.462 0.00 0.00 0.00 4.42
458 459 7.614583 AGGGATATGTGTATGTTACTAGCGTAT 59.385 37.037 0.00 0.00 0.00 3.06
459 460 7.701078 GGGATATGTGTATGTTACTAGCGTATG 59.299 40.741 0.00 0.00 0.00 2.39
460 461 8.242053 GGATATGTGTATGTTACTAGCGTATGT 58.758 37.037 0.00 0.00 0.00 2.29
461 462 9.622004 GATATGTGTATGTTACTAGCGTATGTT 57.378 33.333 0.00 0.00 0.00 2.71
463 464 8.792831 ATGTGTATGTTACTAGCGTATGTTAC 57.207 34.615 0.00 0.00 0.00 2.50
464 465 7.988737 TGTGTATGTTACTAGCGTATGTTACT 58.011 34.615 0.00 0.00 0.00 2.24
465 466 9.108284 TGTGTATGTTACTAGCGTATGTTACTA 57.892 33.333 0.00 0.00 0.00 1.82
468 469 9.059485 GTATGTTACTAGCGTATGTTACTATGC 57.941 37.037 0.00 0.00 34.47 3.14
469 470 7.030075 TGTTACTAGCGTATGTTACTATGCA 57.970 36.000 0.00 0.00 36.32 3.96
470 471 6.914215 TGTTACTAGCGTATGTTACTATGCAC 59.086 38.462 0.00 0.00 36.32 4.57
471 472 5.769484 ACTAGCGTATGTTACTATGCACT 57.231 39.130 0.00 0.00 36.32 4.40
472 473 6.872628 ACTAGCGTATGTTACTATGCACTA 57.127 37.500 0.00 0.00 36.32 2.74
473 474 7.450124 ACTAGCGTATGTTACTATGCACTAT 57.550 36.000 0.00 0.00 36.32 2.12
474 475 7.306213 ACTAGCGTATGTTACTATGCACTATG 58.694 38.462 0.00 0.00 36.32 2.23
475 476 5.470368 AGCGTATGTTACTATGCACTATGG 58.530 41.667 0.00 0.00 36.32 2.74
476 477 4.091509 GCGTATGTTACTATGCACTATGGC 59.908 45.833 0.00 0.00 34.43 4.40
477 478 5.470368 CGTATGTTACTATGCACTATGGCT 58.530 41.667 0.00 0.00 34.04 4.75
478 479 6.617879 CGTATGTTACTATGCACTATGGCTA 58.382 40.000 0.00 0.00 34.04 3.93
479 480 6.747739 CGTATGTTACTATGCACTATGGCTAG 59.252 42.308 0.00 0.00 34.04 3.42
480 481 6.672266 ATGTTACTATGCACTATGGCTAGT 57.328 37.500 0.00 0.00 38.79 2.57
481 482 6.085555 TGTTACTATGCACTATGGCTAGTC 57.914 41.667 0.00 0.00 35.99 2.59
482 483 5.833667 TGTTACTATGCACTATGGCTAGTCT 59.166 40.000 0.00 0.00 35.99 3.24
483 484 6.323996 TGTTACTATGCACTATGGCTAGTCTT 59.676 38.462 0.00 0.00 35.99 3.01
484 485 7.504574 TGTTACTATGCACTATGGCTAGTCTTA 59.495 37.037 0.00 0.00 35.99 2.10
485 486 6.334102 ACTATGCACTATGGCTAGTCTTAC 57.666 41.667 0.00 0.00 35.99 2.34
486 487 5.833667 ACTATGCACTATGGCTAGTCTTACA 59.166 40.000 0.00 0.00 35.99 2.41
487 488 5.614324 ATGCACTATGGCTAGTCTTACAA 57.386 39.130 0.00 0.00 35.99 2.41
488 489 5.011090 TGCACTATGGCTAGTCTTACAAG 57.989 43.478 0.00 0.00 35.99 3.16
489 490 4.709886 TGCACTATGGCTAGTCTTACAAGA 59.290 41.667 0.00 0.00 35.99 3.02
490 491 5.394224 TGCACTATGGCTAGTCTTACAAGAC 60.394 44.000 13.15 13.15 43.93 3.01
491 492 7.753307 TGCACTATGGCTAGTCTTACAAGACA 61.753 42.308 20.99 8.76 44.93 3.41
492 493 9.448686 TGCACTATGGCTAGTCTTACAAGACAG 62.449 44.444 20.99 16.47 44.93 3.51
501 502 4.659111 TCTTACAAGACAGTTTCGTGGA 57.341 40.909 0.00 0.00 37.98 4.02
502 503 5.013568 TCTTACAAGACAGTTTCGTGGAA 57.986 39.130 0.00 0.00 37.98 3.53
503 504 4.807304 TCTTACAAGACAGTTTCGTGGAAC 59.193 41.667 0.00 0.00 37.98 3.62
504 505 2.285977 ACAAGACAGTTTCGTGGAACC 58.714 47.619 0.00 0.00 37.98 3.62
505 506 2.093128 ACAAGACAGTTTCGTGGAACCT 60.093 45.455 0.00 0.00 37.98 3.50
506 507 2.943033 CAAGACAGTTTCGTGGAACCTT 59.057 45.455 0.00 0.00 30.56 3.50
507 508 2.835027 AGACAGTTTCGTGGAACCTTC 58.165 47.619 0.00 0.00 0.00 3.46
517 518 3.842069 GGAACCTTCCACCTGGTTT 57.158 52.632 0.00 0.00 45.48 3.27
518 519 2.082140 GGAACCTTCCACCTGGTTTT 57.918 50.000 0.00 0.00 45.48 2.43
519 520 1.961394 GGAACCTTCCACCTGGTTTTC 59.039 52.381 0.00 0.00 45.48 2.29
520 521 2.661718 GAACCTTCCACCTGGTTTTCA 58.338 47.619 0.00 0.00 45.48 2.69
521 522 2.364972 ACCTTCCACCTGGTTTTCAG 57.635 50.000 0.00 0.00 43.00 3.02
522 523 1.850345 ACCTTCCACCTGGTTTTCAGA 59.150 47.619 0.00 0.00 46.18 3.27
523 524 2.243736 ACCTTCCACCTGGTTTTCAGAA 59.756 45.455 0.00 0.00 46.18 3.02
524 525 2.887152 CCTTCCACCTGGTTTTCAGAAG 59.113 50.000 0.00 5.14 46.18 2.85
525 526 2.656947 TCCACCTGGTTTTCAGAAGG 57.343 50.000 0.00 0.00 46.18 3.46
526 527 1.850345 TCCACCTGGTTTTCAGAAGGT 59.150 47.619 0.00 0.00 46.18 3.50
527 528 2.243736 TCCACCTGGTTTTCAGAAGGTT 59.756 45.455 0.00 0.00 46.18 3.50
528 529 2.623416 CCACCTGGTTTTCAGAAGGTTC 59.377 50.000 0.00 0.00 46.18 3.62
529 530 2.623416 CACCTGGTTTTCAGAAGGTTCC 59.377 50.000 0.00 0.00 46.18 3.62
530 531 2.243736 ACCTGGTTTTCAGAAGGTTCCA 59.756 45.455 0.00 0.00 46.18 3.53
531 532 2.623416 CCTGGTTTTCAGAAGGTTCCAC 59.377 50.000 0.00 0.00 46.18 4.02
532 533 3.287222 CTGGTTTTCAGAAGGTTCCACA 58.713 45.455 0.00 0.00 46.18 4.17
533 534 3.891366 CTGGTTTTCAGAAGGTTCCACAT 59.109 43.478 0.00 0.00 46.18 3.21
534 535 3.636300 TGGTTTTCAGAAGGTTCCACATG 59.364 43.478 0.00 0.00 0.00 3.21
535 536 3.636764 GGTTTTCAGAAGGTTCCACATGT 59.363 43.478 0.00 0.00 0.00 3.21
536 537 4.099419 GGTTTTCAGAAGGTTCCACATGTT 59.901 41.667 0.00 0.00 0.00 2.71
537 538 5.281727 GTTTTCAGAAGGTTCCACATGTTC 58.718 41.667 0.00 0.00 0.00 3.18
653 655 6.440436 ACACGGTGGATATTTTAAAACACAC 58.560 36.000 13.48 14.98 0.00 3.82
655 657 4.555747 CGGTGGATATTTTAAAACACACGC 59.444 41.667 16.62 9.36 0.00 5.34
756 759 8.506168 AATATTACGAAGCCTTTTCTGAATGA 57.494 30.769 0.00 0.00 0.00 2.57
851 862 8.871686 AAACTAAGGTCATGAACATTGTTTTC 57.128 30.769 18.46 0.00 33.38 2.29
854 865 5.458041 AGGTCATGAACATTGTTTTCCAG 57.542 39.130 14.46 0.00 0.00 3.86
859 870 5.539574 TCATGAACATTGTTTTCCAGATGGT 59.460 36.000 3.08 0.00 36.34 3.55
860 871 6.718912 TCATGAACATTGTTTTCCAGATGGTA 59.281 34.615 3.08 0.00 36.34 3.25
864 875 6.764308 ACATTGTTTTCCAGATGGTATGAG 57.236 37.500 0.00 0.00 36.34 2.90
883 894 3.348341 CAATTTTTGCAAAGGCGCG 57.652 47.368 12.41 0.00 45.35 6.86
907 918 7.618751 GCGTCTTGGTTTAGATTACGTATATGC 60.619 40.741 0.00 0.00 0.00 3.14
908 919 7.409026 CGTCTTGGTTTAGATTACGTATATGCG 60.409 40.741 11.90 11.90 37.94 4.73
954 967 0.398696 TTTGCCAGCTAAACCCTCGA 59.601 50.000 0.00 0.00 0.00 4.04
1227 1243 4.785453 GGCTCCGGCAAGACCCTG 62.785 72.222 0.00 0.00 40.87 4.45
1304 1320 1.152247 ACCAGGTCACCTCTCTGCA 60.152 57.895 0.00 0.00 0.00 4.41
1356 1372 3.751698 AGTTTTGCTTACAGAATCCCGTC 59.248 43.478 0.00 0.00 0.00 4.79
1360 1376 2.100916 TGCTTACAGAATCCCGTCTAGC 59.899 50.000 0.00 0.00 0.00 3.42
1362 1378 3.707793 CTTACAGAATCCCGTCTAGCAC 58.292 50.000 0.00 0.00 0.00 4.40
1438 1454 2.433436 TCTCCGACGAGAGAATTGTCA 58.567 47.619 11.95 0.00 41.83 3.58
1480 1496 2.815647 CCCTTCTTCGCCACGCTC 60.816 66.667 0.00 0.00 0.00 5.03
1535 1559 1.207089 TGGACATTAAGGTGGAGCTCG 59.793 52.381 7.83 0.00 0.00 5.03
1547 1571 1.178276 GGAGCTCGAGAAAGTGGAGA 58.822 55.000 18.75 0.00 32.82 3.71
1618 1642 2.659610 GAGCGCCTGGACACTCTT 59.340 61.111 2.29 0.00 0.00 2.85
1651 1675 0.250727 TCGAGGTTGCTTTGGGGAAG 60.251 55.000 0.00 0.00 38.45 3.46
1665 1689 2.224769 TGGGGAAGAATGGAACTGTGTC 60.225 50.000 0.00 0.00 0.00 3.67
1678 1703 4.214332 GGAACTGTGTCTGATTGGTTTCTC 59.786 45.833 0.00 0.00 0.00 2.87
1686 1711 2.232208 CTGATTGGTTTCTCCTTTGGCC 59.768 50.000 0.00 0.00 37.07 5.36
1729 1754 5.456192 TGTTATTTTGGTTTTTGTGTGCG 57.544 34.783 0.00 0.00 0.00 5.34
1749 1774 3.464907 CGTTGGATGCAGATTCTGATCT 58.535 45.455 17.87 0.53 43.43 2.75
2010 2035 3.815401 GGTATGGCGAGATGCTTTTGTAT 59.185 43.478 0.00 0.00 45.43 2.29
2022 2047 2.678336 GCTTTTGTATAGCAGTTCGCCT 59.322 45.455 0.00 0.00 44.04 5.52
2032 2057 7.929245 TGTATAGCAGTTCGCCTTTTATTGATA 59.071 33.333 0.00 0.00 44.04 2.15
2071 2096 6.701145 TTAGCTGATTACAGTAGACCTCTG 57.299 41.667 0.00 0.00 45.04 3.35
2074 2099 6.606069 AGCTGATTACAGTAGACCTCTGATA 58.394 40.000 0.00 0.00 45.04 2.15
2107 2132 9.205719 TGTTTGTCATGATTTTGTCAATATTGG 57.794 29.630 15.36 0.00 40.97 3.16
2226 2251 6.024552 TGGAAAGAAAATCATGGTGTAAGC 57.975 37.500 0.00 0.00 0.00 3.09
2291 2316 4.814465 GCATTTTGCATCGTGCTAATTTC 58.186 39.130 10.54 0.00 45.31 2.17
2529 2556 5.477510 TGTATTGATTGCCACCATGTTTTC 58.522 37.500 0.00 0.00 0.00 2.29
2557 2584 3.056328 GGCCCACGTGAGAAAGCC 61.056 66.667 19.30 16.32 36.17 4.35
2572 2599 1.941377 AAGCCCTGGCATCATTTTCA 58.059 45.000 11.38 0.00 44.88 2.69
2656 2683 5.124457 ACATGTTGATCTAATTGTGCAGGTC 59.876 40.000 0.00 0.00 0.00 3.85
2657 2684 4.650734 TGTTGATCTAATTGTGCAGGTCA 58.349 39.130 0.00 0.00 30.05 4.02
2658 2685 4.455533 TGTTGATCTAATTGTGCAGGTCAC 59.544 41.667 0.00 0.00 45.82 3.67
2777 2967 3.073678 TCAAGATCCCAATGTGTTCGTG 58.926 45.455 0.00 0.00 0.00 4.35
2847 3037 3.609175 CGTGTTTCTCTTACCGACGGTAA 60.609 47.826 31.75 31.75 44.72 2.85
2848 3038 4.488879 GTGTTTCTCTTACCGACGGTAAT 58.511 43.478 33.41 10.22 45.58 1.89
2849 3039 4.325472 GTGTTTCTCTTACCGACGGTAATG 59.675 45.833 33.41 27.53 45.58 1.90
2850 3040 4.022068 TGTTTCTCTTACCGACGGTAATGT 60.022 41.667 33.41 9.47 45.58 2.71
2851 3041 5.182950 TGTTTCTCTTACCGACGGTAATGTA 59.817 40.000 33.41 22.19 45.58 2.29
2932 3122 8.916628 TTGTTGGTCTATGCTGCAATTATATA 57.083 30.769 6.36 0.00 0.00 0.86
2956 3146 2.423185 TGTGTTGGCTGTCTTGTTGAAG 59.577 45.455 0.00 0.00 0.00 3.02
2998 3188 6.963322 ACTTTTTCTGTAGGAGGATGCTTAT 58.037 36.000 0.00 0.00 38.32 1.73
3004 3194 5.069648 TCTGTAGGAGGATGCTTATGTTGAG 59.930 44.000 0.00 0.00 38.32 3.02
3099 3289 9.220767 ACAGGTTAGTTTCTTCTGTATCATTTC 57.779 33.333 0.00 0.00 36.98 2.17
3135 3329 0.673644 CCACTTGAGCCAAGGTACCG 60.674 60.000 6.18 0.00 44.81 4.02
3174 3368 4.505922 GTCATGCTGACTACTGACTAATGC 59.494 45.833 8.50 0.00 43.73 3.56
3178 3372 3.868077 GCTGACTACTGACTAATGCCTTG 59.132 47.826 0.00 0.00 0.00 3.61
3185 3379 1.545582 TGACTAATGCCTTGCCTTTGC 59.454 47.619 0.00 0.00 38.26 3.68
3188 3382 2.224495 TAATGCCTTGCCTTTGCGCC 62.224 55.000 4.18 0.00 41.78 6.53
3285 3479 3.369892 GGTCATACAAGGAGCATCACTGT 60.370 47.826 0.00 0.00 36.25 3.55
3508 3702 6.549364 TCTCAGCTGACCCATTTTCTTTTAAA 59.451 34.615 13.74 0.00 0.00 1.52
3509 3703 6.748132 TCAGCTGACCCATTTTCTTTTAAAG 58.252 36.000 13.74 0.00 0.00 1.85
3656 3853 5.812127 TCATATGTTTGGATGTCAAGAGTCG 59.188 40.000 1.90 0.00 36.62 4.18
3684 3881 2.848678 TCTAGTATCAGCAGTGGGGT 57.151 50.000 0.00 0.00 0.00 4.95
3689 3886 2.578021 AGTATCAGCAGTGGGGTTTGAT 59.422 45.455 0.00 0.00 33.44 2.57
3690 3887 1.843368 ATCAGCAGTGGGGTTTGATG 58.157 50.000 0.00 0.00 32.27 3.07
3691 3888 0.770499 TCAGCAGTGGGGTTTGATGA 59.230 50.000 0.00 0.00 37.38 2.92
3703 3900 3.578688 GGTTTGATGACATGTTTCCTGC 58.421 45.455 0.00 0.00 0.00 4.85
3704 3901 3.578688 GTTTGATGACATGTTTCCTGCC 58.421 45.455 0.00 0.00 0.00 4.85
3731 3928 2.009774 CACTGCAGGGATAAAACTCGG 58.990 52.381 19.93 0.00 0.00 4.63
3968 4165 0.803740 ACGAGTACGAGAAGCTCACC 59.196 55.000 0.00 0.00 42.66 4.02
3983 4180 3.647771 ACCGGGTTTGGAGGCTCC 61.648 66.667 26.95 26.95 36.96 4.70
4208 4407 1.700739 TCATGGTAGGTTTCACCGGTT 59.299 47.619 2.97 0.00 44.90 4.44
4211 4410 3.853355 TGGTAGGTTTCACCGGTTAAA 57.147 42.857 2.97 7.23 44.90 1.52
4236 4435 2.335712 GCCTTGTGCCAGTGTAGCC 61.336 63.158 0.00 0.00 0.00 3.93
4241 4440 1.600636 GTGCCAGTGTAGCCTTGCA 60.601 57.895 0.00 0.00 31.34 4.08
4259 4458 1.801395 GCATAGTTTAGTGCGAGGCGA 60.801 52.381 0.00 0.00 0.00 5.54
4310 4534 1.978782 GCGCGGCATTTTATCTTATGC 59.021 47.619 8.83 0.00 44.93 3.14
4311 4535 2.604373 GCGCGGCATTTTATCTTATGCA 60.604 45.455 8.83 0.00 46.91 3.96
4314 4538 3.848019 GCGGCATTTTATCTTATGCATCG 59.152 43.478 0.19 0.00 46.91 3.84
4418 4679 0.321564 TTTCGGAGGTCATGCCACAG 60.322 55.000 8.58 3.86 40.61 3.66
4557 5313 3.508845 ACTGTTAGTTGAACCTGGCAT 57.491 42.857 0.00 0.00 37.22 4.40
4558 5314 3.149196 ACTGTTAGTTGAACCTGGCATG 58.851 45.455 0.00 0.00 37.22 4.06
4600 5356 1.439679 CAAAGTTCACTAGGGACGGC 58.560 55.000 0.00 0.00 0.00 5.68
4646 5403 0.944386 CTTCACACAGTTTGGGGTCG 59.056 55.000 0.00 0.00 0.00 4.79
4648 5405 0.179067 TCACACAGTTTGGGGTCGAC 60.179 55.000 7.13 7.13 0.00 4.20
4678 5435 3.403936 GCAATACCTAGTGCCCAGG 57.596 57.895 0.00 0.00 41.02 4.45
4679 5436 0.837272 GCAATACCTAGTGCCCAGGA 59.163 55.000 2.59 0.00 41.02 3.86
4717 5477 6.089417 GCCAAATTTAAAGGACAGATGAAACG 59.911 38.462 0.00 0.00 0.00 3.60
4734 5494 1.098050 ACGATGCAAGGAGAAATGCC 58.902 50.000 0.00 0.00 41.87 4.40
4754 5514 2.670934 GGCGGCCATGGCATAGAG 60.671 66.667 36.56 21.81 44.11 2.43
4808 5568 5.520649 GCTATTGAGTAAAGTAGCTGACACC 59.479 44.000 0.00 0.00 37.25 4.16
4809 5569 4.948341 TTGAGTAAAGTAGCTGACACCA 57.052 40.909 0.00 0.00 0.00 4.17
4829 5589 0.380378 GCAAAGAAATATGCGGCGGA 59.620 50.000 9.78 6.17 32.17 5.54
4830 5590 1.859998 GCAAAGAAATATGCGGCGGAC 60.860 52.381 9.78 0.00 32.17 4.79
4901 5663 1.198094 TGGAAATGCCGACAGGAGGA 61.198 55.000 0.00 0.00 41.02 3.71
4924 5686 5.363562 ACACCTATTTGATGAGCTGATGA 57.636 39.130 0.00 0.00 0.00 2.92
4975 5738 6.621596 GCTGATGCTTCTACTTTACCAAACAG 60.622 42.308 0.88 0.00 36.03 3.16
5016 5779 6.323266 ACTATGCTATAAAATCGGAGCTACG 58.677 40.000 13.63 13.63 35.89 3.51
5038 5801 1.177401 GCTGTTTTCCCTCCATGGAC 58.823 55.000 11.44 0.00 38.35 4.02
5040 5803 0.407918 TGTTTTCCCTCCATGGACCC 59.592 55.000 11.44 0.00 38.35 4.46
5105 5868 7.281999 TCGTGATGCAATGGTTTGATCTTAATA 59.718 33.333 0.00 0.00 34.60 0.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.094785 GTGGTTGTGTGTTGTGAGCT 58.905 50.000 0.00 0.00 0.00 4.09
1 2 0.808125 TGTGGTTGTGTGTTGTGAGC 59.192 50.000 0.00 0.00 0.00 4.26
2 3 2.682352 TCATGTGGTTGTGTGTTGTGAG 59.318 45.455 0.00 0.00 0.00 3.51
3 4 2.716217 TCATGTGGTTGTGTGTTGTGA 58.284 42.857 0.00 0.00 0.00 3.58
4 5 3.500558 TTCATGTGGTTGTGTGTTGTG 57.499 42.857 0.00 0.00 0.00 3.33
5 6 3.509575 AGTTTCATGTGGTTGTGTGTTGT 59.490 39.130 0.00 0.00 0.00 3.32
6 7 4.104776 GAGTTTCATGTGGTTGTGTGTTG 58.895 43.478 0.00 0.00 0.00 3.33
7 8 3.761218 TGAGTTTCATGTGGTTGTGTGTT 59.239 39.130 0.00 0.00 0.00 3.32
8 9 3.351740 TGAGTTTCATGTGGTTGTGTGT 58.648 40.909 0.00 0.00 0.00 3.72
9 10 3.793129 GCTGAGTTTCATGTGGTTGTGTG 60.793 47.826 0.00 0.00 0.00 3.82
10 11 2.358898 GCTGAGTTTCATGTGGTTGTGT 59.641 45.455 0.00 0.00 0.00 3.72
11 12 2.620115 AGCTGAGTTTCATGTGGTTGTG 59.380 45.455 0.00 0.00 0.00 3.33
12 13 2.936202 AGCTGAGTTTCATGTGGTTGT 58.064 42.857 0.00 0.00 0.00 3.32
13 14 3.120546 CGTAGCTGAGTTTCATGTGGTTG 60.121 47.826 0.00 0.00 0.00 3.77
14 15 3.067106 CGTAGCTGAGTTTCATGTGGTT 58.933 45.455 0.00 0.00 0.00 3.67
15 16 2.037251 ACGTAGCTGAGTTTCATGTGGT 59.963 45.455 0.00 0.00 0.00 4.16
16 17 2.688507 ACGTAGCTGAGTTTCATGTGG 58.311 47.619 0.00 0.00 0.00 4.17
17 18 4.024893 ACAAACGTAGCTGAGTTTCATGTG 60.025 41.667 15.50 9.58 38.37 3.21
18 19 4.127171 ACAAACGTAGCTGAGTTTCATGT 58.873 39.130 15.50 10.62 38.37 3.21
19 20 4.449068 AGACAAACGTAGCTGAGTTTCATG 59.551 41.667 15.50 10.13 38.37 3.07
20 21 4.632153 AGACAAACGTAGCTGAGTTTCAT 58.368 39.130 15.50 9.13 38.37 2.57
21 22 4.049186 GAGACAAACGTAGCTGAGTTTCA 58.951 43.478 15.50 0.00 38.37 2.69
22 23 4.049186 TGAGACAAACGTAGCTGAGTTTC 58.951 43.478 15.50 8.39 38.37 2.78
23 24 4.054780 TGAGACAAACGTAGCTGAGTTT 57.945 40.909 13.41 13.41 40.74 2.66
24 25 3.728076 TGAGACAAACGTAGCTGAGTT 57.272 42.857 0.00 0.00 0.00 3.01
25 26 3.728076 TTGAGACAAACGTAGCTGAGT 57.272 42.857 0.00 0.00 0.00 3.41
26 27 5.403897 TTTTTGAGACAAACGTAGCTGAG 57.596 39.130 0.00 0.00 0.00 3.35
47 48 4.533222 CAACGTAGCCGAGTTTCATTTTT 58.467 39.130 0.00 0.00 37.88 1.94
48 49 3.608474 GCAACGTAGCCGAGTTTCATTTT 60.608 43.478 0.00 0.00 37.88 1.82
49 50 2.095919 GCAACGTAGCCGAGTTTCATTT 60.096 45.455 0.00 0.00 37.88 2.32
50 51 1.463444 GCAACGTAGCCGAGTTTCATT 59.537 47.619 0.00 0.00 37.88 2.57
51 52 1.076332 GCAACGTAGCCGAGTTTCAT 58.924 50.000 0.00 0.00 37.88 2.57
52 53 0.947180 GGCAACGTAGCCGAGTTTCA 60.947 55.000 0.00 0.00 46.12 2.69
53 54 1.785951 GGCAACGTAGCCGAGTTTC 59.214 57.895 0.00 0.00 46.12 2.78
54 55 3.961729 GGCAACGTAGCCGAGTTT 58.038 55.556 0.00 0.00 46.12 2.66
101 102 5.181245 TGCTGTTAGCGAGATTTAGCTTTTT 59.819 36.000 0.00 0.00 46.26 1.94
102 103 4.695455 TGCTGTTAGCGAGATTTAGCTTTT 59.305 37.500 0.00 0.00 46.26 2.27
103 104 4.253685 TGCTGTTAGCGAGATTTAGCTTT 58.746 39.130 0.00 0.00 46.26 3.51
104 105 3.861840 TGCTGTTAGCGAGATTTAGCTT 58.138 40.909 0.00 0.00 46.26 3.74
105 106 3.526931 TGCTGTTAGCGAGATTTAGCT 57.473 42.857 0.00 0.00 46.26 3.32
114 115 0.744414 GGATGCCTTGCTGTTAGCGA 60.744 55.000 0.00 0.00 46.26 4.93
115 116 1.026182 TGGATGCCTTGCTGTTAGCG 61.026 55.000 0.00 0.00 46.26 4.26
116 117 1.336125 GATGGATGCCTTGCTGTTAGC 59.664 52.381 0.00 0.00 42.82 3.09
117 118 1.600957 CGATGGATGCCTTGCTGTTAG 59.399 52.381 0.00 0.00 0.00 2.34
118 119 1.667236 CGATGGATGCCTTGCTGTTA 58.333 50.000 0.00 0.00 0.00 2.41
119 120 1.033746 CCGATGGATGCCTTGCTGTT 61.034 55.000 0.00 0.00 0.00 3.16
120 121 1.452651 CCGATGGATGCCTTGCTGT 60.453 57.895 0.00 0.00 0.00 4.40
121 122 1.442526 GACCGATGGATGCCTTGCTG 61.443 60.000 0.00 0.00 0.00 4.41
122 123 1.153086 GACCGATGGATGCCTTGCT 60.153 57.895 0.00 0.00 0.00 3.91
123 124 1.153086 AGACCGATGGATGCCTTGC 60.153 57.895 0.00 0.00 0.00 4.01
124 125 0.178767 TGAGACCGATGGATGCCTTG 59.821 55.000 0.00 0.00 0.00 3.61
125 126 0.179000 GTGAGACCGATGGATGCCTT 59.821 55.000 0.00 0.00 0.00 4.35
126 127 1.690219 GGTGAGACCGATGGATGCCT 61.690 60.000 0.00 0.00 0.00 4.75
127 128 1.227674 GGTGAGACCGATGGATGCC 60.228 63.158 0.00 0.00 0.00 4.40
128 129 1.040646 TAGGTGAGACCGATGGATGC 58.959 55.000 0.00 0.00 44.90 3.91
129 130 2.031870 TGTAGGTGAGACCGATGGATG 58.968 52.381 0.00 0.00 44.90 3.51
130 131 2.311463 CTGTAGGTGAGACCGATGGAT 58.689 52.381 0.00 0.00 44.90 3.41
131 132 1.685180 CCTGTAGGTGAGACCGATGGA 60.685 57.143 0.00 0.00 44.90 3.41
132 133 0.747255 CCTGTAGGTGAGACCGATGG 59.253 60.000 0.00 0.00 44.90 3.51
133 134 0.747255 CCCTGTAGGTGAGACCGATG 59.253 60.000 0.00 0.00 44.90 3.84
134 135 0.629596 TCCCTGTAGGTGAGACCGAT 59.370 55.000 0.00 0.00 44.90 4.18
135 136 0.629596 ATCCCTGTAGGTGAGACCGA 59.370 55.000 0.00 0.00 44.90 4.69
136 137 1.033574 GATCCCTGTAGGTGAGACCG 58.966 60.000 0.00 0.00 44.90 4.79
137 138 1.033574 CGATCCCTGTAGGTGAGACC 58.966 60.000 0.00 0.00 38.99 3.85
138 139 2.054232 TCGATCCCTGTAGGTGAGAC 57.946 55.000 0.00 0.00 36.75 3.36
139 140 2.174854 TCATCGATCCCTGTAGGTGAGA 59.825 50.000 0.00 0.00 36.75 3.27
140 141 2.587522 TCATCGATCCCTGTAGGTGAG 58.412 52.381 0.00 0.00 36.75 3.51
141 142 2.748209 TCATCGATCCCTGTAGGTGA 57.252 50.000 0.00 0.00 36.75 4.02
142 143 2.695666 ACTTCATCGATCCCTGTAGGTG 59.304 50.000 0.00 0.00 36.75 4.00
143 144 2.695666 CACTTCATCGATCCCTGTAGGT 59.304 50.000 0.00 0.00 36.75 3.08
144 145 2.695666 ACACTTCATCGATCCCTGTAGG 59.304 50.000 0.00 0.00 0.00 3.18
145 146 3.711086 CACACTTCATCGATCCCTGTAG 58.289 50.000 0.00 0.00 0.00 2.74
146 147 2.159099 GCACACTTCATCGATCCCTGTA 60.159 50.000 0.00 0.00 0.00 2.74
147 148 1.406069 GCACACTTCATCGATCCCTGT 60.406 52.381 0.00 0.00 0.00 4.00
148 149 1.134580 AGCACACTTCATCGATCCCTG 60.135 52.381 0.00 0.00 0.00 4.45
149 150 1.134580 CAGCACACTTCATCGATCCCT 60.135 52.381 0.00 0.00 0.00 4.20
150 151 1.134699 TCAGCACACTTCATCGATCCC 60.135 52.381 0.00 0.00 0.00 3.85
151 152 1.929836 GTCAGCACACTTCATCGATCC 59.070 52.381 0.00 0.00 0.00 3.36
152 153 2.602211 CAGTCAGCACACTTCATCGATC 59.398 50.000 0.00 0.00 0.00 3.69
153 154 2.232208 TCAGTCAGCACACTTCATCGAT 59.768 45.455 0.00 0.00 0.00 3.59
154 155 1.613437 TCAGTCAGCACACTTCATCGA 59.387 47.619 0.00 0.00 0.00 3.59
155 156 2.070262 TCAGTCAGCACACTTCATCG 57.930 50.000 0.00 0.00 0.00 3.84
156 157 5.641209 ACTTATTCAGTCAGCACACTTCATC 59.359 40.000 0.00 0.00 0.00 2.92
157 158 5.410746 CACTTATTCAGTCAGCACACTTCAT 59.589 40.000 0.00 0.00 30.92 2.57
158 159 4.751600 CACTTATTCAGTCAGCACACTTCA 59.248 41.667 0.00 0.00 30.92 3.02
159 160 4.752101 ACACTTATTCAGTCAGCACACTTC 59.248 41.667 0.00 0.00 30.92 3.01
160 161 4.512944 CACACTTATTCAGTCAGCACACTT 59.487 41.667 0.00 0.00 30.92 3.16
161 162 4.060900 CACACTTATTCAGTCAGCACACT 58.939 43.478 0.00 0.00 30.92 3.55
162 163 4.058124 TCACACTTATTCAGTCAGCACAC 58.942 43.478 0.00 0.00 30.92 3.82
163 164 4.335400 TCACACTTATTCAGTCAGCACA 57.665 40.909 0.00 0.00 30.92 4.57
164 165 5.292101 GGTATCACACTTATTCAGTCAGCAC 59.708 44.000 0.00 0.00 30.92 4.40
165 166 5.419542 GGTATCACACTTATTCAGTCAGCA 58.580 41.667 0.00 0.00 30.92 4.41
166 167 4.504461 CGGTATCACACTTATTCAGTCAGC 59.496 45.833 0.00 0.00 30.92 4.26
167 168 5.891451 TCGGTATCACACTTATTCAGTCAG 58.109 41.667 0.00 0.00 30.92 3.51
168 169 5.678871 GCTCGGTATCACACTTATTCAGTCA 60.679 44.000 0.00 0.00 30.92 3.41
169 170 4.740695 GCTCGGTATCACACTTATTCAGTC 59.259 45.833 0.00 0.00 30.92 3.51
170 171 4.441634 GGCTCGGTATCACACTTATTCAGT 60.442 45.833 0.00 0.00 35.35 3.41
171 172 4.051922 GGCTCGGTATCACACTTATTCAG 58.948 47.826 0.00 0.00 0.00 3.02
172 173 3.704566 AGGCTCGGTATCACACTTATTCA 59.295 43.478 0.00 0.00 0.00 2.57
173 174 4.323553 AGGCTCGGTATCACACTTATTC 57.676 45.455 0.00 0.00 0.00 1.75
174 175 4.755266 AAGGCTCGGTATCACACTTATT 57.245 40.909 0.00 0.00 0.00 1.40
175 176 4.755266 AAAGGCTCGGTATCACACTTAT 57.245 40.909 0.00 0.00 0.00 1.73
176 177 4.546829 AAAAGGCTCGGTATCACACTTA 57.453 40.909 0.00 0.00 0.00 2.24
177 178 3.418684 AAAAGGCTCGGTATCACACTT 57.581 42.857 0.00 0.00 0.00 3.16
178 179 3.074412 CAAAAAGGCTCGGTATCACACT 58.926 45.455 0.00 0.00 0.00 3.55
179 180 2.161609 CCAAAAAGGCTCGGTATCACAC 59.838 50.000 0.00 0.00 0.00 3.82
180 181 2.432444 CCAAAAAGGCTCGGTATCACA 58.568 47.619 0.00 0.00 0.00 3.58
181 182 1.743394 CCCAAAAAGGCTCGGTATCAC 59.257 52.381 0.00 0.00 35.39 3.06
182 183 1.631388 TCCCAAAAAGGCTCGGTATCA 59.369 47.619 0.00 0.00 35.39 2.15
183 184 2.413310 TCCCAAAAAGGCTCGGTATC 57.587 50.000 0.00 0.00 35.39 2.24
184 185 2.723273 CTTCCCAAAAAGGCTCGGTAT 58.277 47.619 0.00 0.00 35.39 2.73
185 186 1.884928 GCTTCCCAAAAAGGCTCGGTA 60.885 52.381 0.00 0.00 35.39 4.02
186 187 1.179174 GCTTCCCAAAAAGGCTCGGT 61.179 55.000 0.00 0.00 35.39 4.69
187 188 0.895559 AGCTTCCCAAAAAGGCTCGG 60.896 55.000 0.00 0.00 35.39 4.63
188 189 0.961753 AAGCTTCCCAAAAAGGCTCG 59.038 50.000 0.00 0.00 35.39 5.03
189 190 3.191581 GTCTAAGCTTCCCAAAAAGGCTC 59.808 47.826 0.00 0.00 35.39 4.70
190 191 3.157881 GTCTAAGCTTCCCAAAAAGGCT 58.842 45.455 0.00 0.00 35.39 4.58
191 192 3.157881 AGTCTAAGCTTCCCAAAAAGGC 58.842 45.455 0.00 0.00 35.39 4.35
192 193 4.396478 GCTAGTCTAAGCTTCCCAAAAAGG 59.604 45.833 0.00 0.00 39.50 3.11
193 194 4.396478 GGCTAGTCTAAGCTTCCCAAAAAG 59.604 45.833 0.00 0.00 42.37 2.27
194 195 4.202524 TGGCTAGTCTAAGCTTCCCAAAAA 60.203 41.667 0.00 0.00 42.37 1.94
195 196 3.329520 TGGCTAGTCTAAGCTTCCCAAAA 59.670 43.478 0.00 0.00 42.37 2.44
196 197 2.910319 TGGCTAGTCTAAGCTTCCCAAA 59.090 45.455 0.00 0.00 42.37 3.28
197 198 2.236395 GTGGCTAGTCTAAGCTTCCCAA 59.764 50.000 0.00 0.00 42.37 4.12
198 199 1.831736 GTGGCTAGTCTAAGCTTCCCA 59.168 52.381 0.00 0.00 42.37 4.37
199 200 1.831736 TGTGGCTAGTCTAAGCTTCCC 59.168 52.381 0.00 0.00 42.37 3.97
200 201 3.611766 TTGTGGCTAGTCTAAGCTTCC 57.388 47.619 0.00 0.00 42.37 3.46
201 202 4.759782 TCATTGTGGCTAGTCTAAGCTTC 58.240 43.478 0.00 0.00 42.37 3.86
202 203 4.467795 TCTCATTGTGGCTAGTCTAAGCTT 59.532 41.667 3.48 3.48 42.37 3.74
203 204 4.026744 TCTCATTGTGGCTAGTCTAAGCT 58.973 43.478 0.00 0.00 42.37 3.74
204 205 4.142049 ACTCTCATTGTGGCTAGTCTAAGC 60.142 45.833 0.00 0.00 41.99 3.09
205 206 5.590530 ACTCTCATTGTGGCTAGTCTAAG 57.409 43.478 0.00 0.00 0.00 2.18
206 207 6.663953 AGTTACTCTCATTGTGGCTAGTCTAA 59.336 38.462 0.00 0.00 0.00 2.10
207 208 6.188407 AGTTACTCTCATTGTGGCTAGTCTA 58.812 40.000 0.00 0.00 0.00 2.59
208 209 5.020132 AGTTACTCTCATTGTGGCTAGTCT 58.980 41.667 0.00 0.00 0.00 3.24
209 210 5.331876 AGTTACTCTCATTGTGGCTAGTC 57.668 43.478 0.00 0.00 0.00 2.59
210 211 5.246203 TGAAGTTACTCTCATTGTGGCTAGT 59.754 40.000 0.00 0.00 0.00 2.57
211 212 5.724328 TGAAGTTACTCTCATTGTGGCTAG 58.276 41.667 0.00 0.00 0.00 3.42
212 213 5.246203 ACTGAAGTTACTCTCATTGTGGCTA 59.754 40.000 0.00 0.00 0.00 3.93
213 214 4.040952 ACTGAAGTTACTCTCATTGTGGCT 59.959 41.667 0.00 0.00 0.00 4.75
214 215 4.319177 ACTGAAGTTACTCTCATTGTGGC 58.681 43.478 0.00 0.00 0.00 5.01
215 216 6.692486 AGTACTGAAGTTACTCTCATTGTGG 58.308 40.000 0.00 0.00 0.00 4.17
216 217 9.130312 GTTAGTACTGAAGTTACTCTCATTGTG 57.870 37.037 5.39 0.00 0.00 3.33
217 218 8.857098 TGTTAGTACTGAAGTTACTCTCATTGT 58.143 33.333 5.39 0.00 0.00 2.71
218 219 9.862371 ATGTTAGTACTGAAGTTACTCTCATTG 57.138 33.333 5.39 0.00 0.00 2.82
220 221 9.244292 TGATGTTAGTACTGAAGTTACTCTCAT 57.756 33.333 5.39 0.00 0.00 2.90
221 222 8.631480 TGATGTTAGTACTGAAGTTACTCTCA 57.369 34.615 5.39 0.00 0.00 3.27
222 223 9.562583 CTTGATGTTAGTACTGAAGTTACTCTC 57.437 37.037 5.39 0.00 0.00 3.20
223 224 9.080097 ACTTGATGTTAGTACTGAAGTTACTCT 57.920 33.333 5.39 0.00 0.00 3.24
224 225 9.344309 GACTTGATGTTAGTACTGAAGTTACTC 57.656 37.037 5.39 0.00 0.00 2.59
225 226 8.305317 GGACTTGATGTTAGTACTGAAGTTACT 58.695 37.037 5.39 0.00 0.00 2.24
226 227 8.086522 TGGACTTGATGTTAGTACTGAAGTTAC 58.913 37.037 5.39 3.21 0.00 2.50
227 228 8.185506 TGGACTTGATGTTAGTACTGAAGTTA 57.814 34.615 5.39 0.00 0.00 2.24
228 229 7.062749 TGGACTTGATGTTAGTACTGAAGTT 57.937 36.000 5.39 0.00 0.00 2.66
229 230 6.665992 TGGACTTGATGTTAGTACTGAAGT 57.334 37.500 5.39 4.11 0.00 3.01
230 231 7.155328 AGTTGGACTTGATGTTAGTACTGAAG 58.845 38.462 5.39 1.03 0.00 3.02
231 232 7.062749 AGTTGGACTTGATGTTAGTACTGAA 57.937 36.000 5.39 0.00 0.00 3.02
232 233 6.665992 AGTTGGACTTGATGTTAGTACTGA 57.334 37.500 5.39 0.00 0.00 3.41
233 234 8.709646 GTTTAGTTGGACTTGATGTTAGTACTG 58.290 37.037 5.39 0.00 0.00 2.74
234 235 8.426489 TGTTTAGTTGGACTTGATGTTAGTACT 58.574 33.333 0.00 0.00 0.00 2.73
235 236 8.597662 TGTTTAGTTGGACTTGATGTTAGTAC 57.402 34.615 0.00 0.00 0.00 2.73
236 237 9.616156 TTTGTTTAGTTGGACTTGATGTTAGTA 57.384 29.630 0.00 0.00 0.00 1.82
237 238 8.514330 TTTGTTTAGTTGGACTTGATGTTAGT 57.486 30.769 0.00 0.00 0.00 2.24
238 239 9.965824 AATTTGTTTAGTTGGACTTGATGTTAG 57.034 29.630 0.00 0.00 0.00 2.34
240 241 9.097257 CAAATTTGTTTAGTTGGACTTGATGTT 57.903 29.630 10.15 0.00 0.00 2.71
241 242 7.224557 GCAAATTTGTTTAGTTGGACTTGATGT 59.775 33.333 19.03 0.00 0.00 3.06
242 243 7.439056 AGCAAATTTGTTTAGTTGGACTTGATG 59.561 33.333 19.03 0.00 0.00 3.07
243 244 7.500141 AGCAAATTTGTTTAGTTGGACTTGAT 58.500 30.769 19.03 0.00 0.00 2.57
244 245 6.872920 AGCAAATTTGTTTAGTTGGACTTGA 58.127 32.000 19.03 0.00 0.00 3.02
245 246 7.538303 AAGCAAATTTGTTTAGTTGGACTTG 57.462 32.000 17.44 0.00 29.54 3.16
246 247 9.260002 CATAAGCAAATTTGTTTAGTTGGACTT 57.740 29.630 25.23 15.53 37.30 3.01
247 248 8.421002 ACATAAGCAAATTTGTTTAGTTGGACT 58.579 29.630 25.23 10.07 37.30 3.85
248 249 8.487176 CACATAAGCAAATTTGTTTAGTTGGAC 58.513 33.333 25.23 5.58 37.30 4.02
249 250 7.655328 CCACATAAGCAAATTTGTTTAGTTGGA 59.345 33.333 30.20 15.31 39.46 3.53
250 251 7.571059 GCCACATAAGCAAATTTGTTTAGTTGG 60.571 37.037 29.93 29.93 39.74 3.77
251 252 7.042187 TGCCACATAAGCAAATTTGTTTAGTTG 60.042 33.333 25.23 21.87 37.30 3.16
252 253 6.989169 TGCCACATAAGCAAATTTGTTTAGTT 59.011 30.769 25.23 15.42 37.30 2.24
253 254 6.520272 TGCCACATAAGCAAATTTGTTTAGT 58.480 32.000 25.23 20.44 37.30 2.24
254 255 7.418840 TTGCCACATAAGCAAATTTGTTTAG 57.581 32.000 25.23 19.98 46.71 1.85
265 266 4.395854 CACTAACTCATTGCCACATAAGCA 59.604 41.667 0.00 0.00 38.81 3.91
266 267 4.635765 TCACTAACTCATTGCCACATAAGC 59.364 41.667 0.00 0.00 0.00 3.09
267 268 5.295292 CCTCACTAACTCATTGCCACATAAG 59.705 44.000 0.00 0.00 0.00 1.73
268 269 5.045942 TCCTCACTAACTCATTGCCACATAA 60.046 40.000 0.00 0.00 0.00 1.90
269 270 4.469586 TCCTCACTAACTCATTGCCACATA 59.530 41.667 0.00 0.00 0.00 2.29
270 271 3.264193 TCCTCACTAACTCATTGCCACAT 59.736 43.478 0.00 0.00 0.00 3.21
271 272 2.637382 TCCTCACTAACTCATTGCCACA 59.363 45.455 0.00 0.00 0.00 4.17
272 273 3.055819 TCTCCTCACTAACTCATTGCCAC 60.056 47.826 0.00 0.00 0.00 5.01
273 274 3.173151 TCTCCTCACTAACTCATTGCCA 58.827 45.455 0.00 0.00 0.00 4.92
274 275 3.449018 TCTCTCCTCACTAACTCATTGCC 59.551 47.826 0.00 0.00 0.00 4.52
275 276 4.441356 CCTCTCTCCTCACTAACTCATTGC 60.441 50.000 0.00 0.00 0.00 3.56
276 277 4.709397 ACCTCTCTCCTCACTAACTCATTG 59.291 45.833 0.00 0.00 0.00 2.82
277 278 4.941713 ACCTCTCTCCTCACTAACTCATT 58.058 43.478 0.00 0.00 0.00 2.57
278 279 4.601406 ACCTCTCTCCTCACTAACTCAT 57.399 45.455 0.00 0.00 0.00 2.90
279 280 4.536888 ACTACCTCTCTCCTCACTAACTCA 59.463 45.833 0.00 0.00 0.00 3.41
280 281 5.106876 ACTACCTCTCTCCTCACTAACTC 57.893 47.826 0.00 0.00 0.00 3.01
281 282 5.523883 AACTACCTCTCTCCTCACTAACT 57.476 43.478 0.00 0.00 0.00 2.24
282 283 5.711036 TCAAACTACCTCTCTCCTCACTAAC 59.289 44.000 0.00 0.00 0.00 2.34
283 284 5.888901 TCAAACTACCTCTCTCCTCACTAA 58.111 41.667 0.00 0.00 0.00 2.24
284 285 5.014333 ACTCAAACTACCTCTCTCCTCACTA 59.986 44.000 0.00 0.00 0.00 2.74
285 286 4.202631 ACTCAAACTACCTCTCTCCTCACT 60.203 45.833 0.00 0.00 0.00 3.41
286 287 4.083565 ACTCAAACTACCTCTCTCCTCAC 58.916 47.826 0.00 0.00 0.00 3.51
287 288 4.390129 ACTCAAACTACCTCTCTCCTCA 57.610 45.455 0.00 0.00 0.00 3.86
288 289 5.947566 AGTTACTCAAACTACCTCTCTCCTC 59.052 44.000 0.00 0.00 46.85 3.71
289 290 5.894653 AGTTACTCAAACTACCTCTCTCCT 58.105 41.667 0.00 0.00 46.85 3.69
310 311 8.118976 TGTGATGTTACAGTAACTAGCTAAGT 57.881 34.615 21.56 0.00 41.49 2.24
311 312 9.025020 CATGTGATGTTACAGTAACTAGCTAAG 57.975 37.037 21.56 6.36 39.38 2.18
312 313 8.528643 ACATGTGATGTTACAGTAACTAGCTAA 58.471 33.333 21.56 3.59 41.63 3.09
313 314 8.063200 ACATGTGATGTTACAGTAACTAGCTA 57.937 34.615 21.56 4.25 41.63 3.32
314 315 6.936279 ACATGTGATGTTACAGTAACTAGCT 58.064 36.000 21.56 6.57 41.63 3.32
315 316 7.036220 AGACATGTGATGTTACAGTAACTAGC 58.964 38.462 21.56 12.59 45.03 3.42
316 317 8.244113 TGAGACATGTGATGTTACAGTAACTAG 58.756 37.037 21.56 8.25 45.03 2.57
317 318 8.117813 TGAGACATGTGATGTTACAGTAACTA 57.882 34.615 21.56 10.50 45.03 2.24
318 319 6.993079 TGAGACATGTGATGTTACAGTAACT 58.007 36.000 21.56 9.41 45.03 2.24
319 320 7.652300 TTGAGACATGTGATGTTACAGTAAC 57.348 36.000 15.58 15.58 45.03 2.50
320 321 7.148423 GCATTGAGACATGTGATGTTACAGTAA 60.148 37.037 1.15 0.00 45.03 2.24
321 322 6.313658 GCATTGAGACATGTGATGTTACAGTA 59.686 38.462 1.15 0.00 45.03 2.74
322 323 5.122869 GCATTGAGACATGTGATGTTACAGT 59.877 40.000 1.15 0.00 45.03 3.55
323 324 5.122711 TGCATTGAGACATGTGATGTTACAG 59.877 40.000 1.15 0.00 45.03 2.74
324 325 5.002516 TGCATTGAGACATGTGATGTTACA 58.997 37.500 1.15 0.00 45.03 2.41
325 326 5.122869 AGTGCATTGAGACATGTGATGTTAC 59.877 40.000 1.15 6.37 45.03 2.50
326 327 5.247862 AGTGCATTGAGACATGTGATGTTA 58.752 37.500 1.15 0.00 45.03 2.41
327 328 4.077108 AGTGCATTGAGACATGTGATGTT 58.923 39.130 1.15 0.00 45.03 2.71
329 330 4.260091 CGTAGTGCATTGAGACATGTGATG 60.260 45.833 1.15 3.48 0.00 3.07
330 331 3.867493 CGTAGTGCATTGAGACATGTGAT 59.133 43.478 1.15 0.00 0.00 3.06
331 332 3.056891 TCGTAGTGCATTGAGACATGTGA 60.057 43.478 1.15 0.00 0.00 3.58
332 333 3.253230 TCGTAGTGCATTGAGACATGTG 58.747 45.455 1.15 0.00 0.00 3.21
333 334 3.056536 ACTCGTAGTGCATTGAGACATGT 60.057 43.478 0.00 0.00 32.81 3.21
334 335 3.515630 ACTCGTAGTGCATTGAGACATG 58.484 45.455 12.49 0.00 32.81 3.21
335 336 3.445450 AGACTCGTAGTGCATTGAGACAT 59.555 43.478 12.49 0.00 32.81 3.06
336 337 2.820197 AGACTCGTAGTGCATTGAGACA 59.180 45.455 12.49 0.00 32.81 3.41
337 338 3.495670 AGACTCGTAGTGCATTGAGAC 57.504 47.619 12.49 7.72 32.81 3.36
338 339 6.238676 GGTTATAGACTCGTAGTGCATTGAGA 60.239 42.308 12.49 2.34 32.81 3.27
339 340 5.915758 GGTTATAGACTCGTAGTGCATTGAG 59.084 44.000 0.00 0.00 34.65 3.02
340 341 5.593095 AGGTTATAGACTCGTAGTGCATTGA 59.407 40.000 0.00 0.00 0.00 2.57
341 342 5.833082 AGGTTATAGACTCGTAGTGCATTG 58.167 41.667 0.00 0.00 0.00 2.82
342 343 7.578310 TTAGGTTATAGACTCGTAGTGCATT 57.422 36.000 0.00 0.00 0.00 3.56
343 344 7.762588 ATTAGGTTATAGACTCGTAGTGCAT 57.237 36.000 0.00 0.00 0.00 3.96
344 345 8.681486 TTATTAGGTTATAGACTCGTAGTGCA 57.319 34.615 0.00 0.00 0.00 4.57
368 369 8.796475 AGTGTGATGTCATACAAAGCTTTATTT 58.204 29.630 12.25 1.87 39.95 1.40
369 370 8.340618 AGTGTGATGTCATACAAAGCTTTATT 57.659 30.769 12.25 4.53 39.95 1.40
370 371 7.928307 AGTGTGATGTCATACAAAGCTTTAT 57.072 32.000 12.25 2.53 39.95 1.40
371 372 7.744087 AAGTGTGATGTCATACAAAGCTTTA 57.256 32.000 12.25 0.00 39.95 1.85
372 373 6.639632 AAGTGTGATGTCATACAAAGCTTT 57.360 33.333 5.69 5.69 39.95 3.51
373 374 7.928307 ATAAGTGTGATGTCATACAAAGCTT 57.072 32.000 11.61 0.00 39.95 3.74
374 375 9.618890 AATATAAGTGTGATGTCATACAAAGCT 57.381 29.630 11.61 0.00 39.95 3.74
382 383 9.154632 TGGGTAGTAATATAAGTGTGATGTCAT 57.845 33.333 0.00 0.00 0.00 3.06
383 384 8.541899 TGGGTAGTAATATAAGTGTGATGTCA 57.458 34.615 0.00 0.00 0.00 3.58
384 385 9.998106 AATGGGTAGTAATATAAGTGTGATGTC 57.002 33.333 0.00 0.00 0.00 3.06
388 389 9.353431 TCGTAATGGGTAGTAATATAAGTGTGA 57.647 33.333 0.00 0.00 0.00 3.58
389 390 9.970395 TTCGTAATGGGTAGTAATATAAGTGTG 57.030 33.333 0.00 0.00 0.00 3.82
427 428 9.742144 CTAGTAACATACACATATCCCTAGACT 57.258 37.037 0.00 0.00 0.00 3.24
428 429 8.460428 GCTAGTAACATACACATATCCCTAGAC 58.540 40.741 0.00 0.00 0.00 2.59
429 430 7.336176 CGCTAGTAACATACACATATCCCTAGA 59.664 40.741 0.00 0.00 0.00 2.43
430 431 7.120873 ACGCTAGTAACATACACATATCCCTAG 59.879 40.741 0.00 0.00 0.00 3.02
431 432 6.944290 ACGCTAGTAACATACACATATCCCTA 59.056 38.462 0.00 0.00 0.00 3.53
432 433 5.773680 ACGCTAGTAACATACACATATCCCT 59.226 40.000 0.00 0.00 0.00 4.20
433 434 6.022163 ACGCTAGTAACATACACATATCCC 57.978 41.667 0.00 0.00 0.00 3.85
434 435 8.242053 ACATACGCTAGTAACATACACATATCC 58.758 37.037 0.00 0.00 36.29 2.59
435 436 9.622004 AACATACGCTAGTAACATACACATATC 57.378 33.333 0.00 0.00 36.29 1.63
437 438 9.882996 GTAACATACGCTAGTAACATACACATA 57.117 33.333 0.00 0.00 36.29 2.29
438 439 8.627403 AGTAACATACGCTAGTAACATACACAT 58.373 33.333 0.00 0.00 36.29 3.21
439 440 7.988737 AGTAACATACGCTAGTAACATACACA 58.011 34.615 0.00 0.00 36.29 3.72
442 443 9.059485 GCATAGTAACATACGCTAGTAACATAC 57.941 37.037 0.00 0.00 36.29 2.39
443 444 8.785946 TGCATAGTAACATACGCTAGTAACATA 58.214 33.333 0.00 0.00 36.29 2.29
444 445 7.594015 GTGCATAGTAACATACGCTAGTAACAT 59.406 37.037 0.00 0.00 36.29 2.71
445 446 6.914215 GTGCATAGTAACATACGCTAGTAACA 59.086 38.462 0.00 0.00 36.29 2.41
446 447 7.137426 AGTGCATAGTAACATACGCTAGTAAC 58.863 38.462 0.00 0.00 36.29 2.50
447 448 7.268199 AGTGCATAGTAACATACGCTAGTAA 57.732 36.000 0.00 0.00 36.29 2.24
448 449 6.872628 AGTGCATAGTAACATACGCTAGTA 57.127 37.500 0.00 0.00 37.24 1.82
449 450 5.769484 AGTGCATAGTAACATACGCTAGT 57.231 39.130 0.00 0.00 0.00 2.57
450 451 6.747739 CCATAGTGCATAGTAACATACGCTAG 59.252 42.308 0.00 0.00 0.00 3.42
451 452 6.617879 CCATAGTGCATAGTAACATACGCTA 58.382 40.000 0.00 0.00 0.00 4.26
452 453 5.470368 CCATAGTGCATAGTAACATACGCT 58.530 41.667 0.00 0.00 0.00 5.07
453 454 4.091509 GCCATAGTGCATAGTAACATACGC 59.908 45.833 0.00 0.00 0.00 4.42
454 455 5.470368 AGCCATAGTGCATAGTAACATACG 58.530 41.667 0.00 0.00 0.00 3.06
455 456 7.603651 ACTAGCCATAGTGCATAGTAACATAC 58.396 38.462 0.00 0.00 40.84 2.39
456 457 7.670140 AGACTAGCCATAGTGCATAGTAACATA 59.330 37.037 0.00 0.00 42.46 2.29
457 458 6.495181 AGACTAGCCATAGTGCATAGTAACAT 59.505 38.462 0.00 0.00 42.46 2.71
458 459 5.833667 AGACTAGCCATAGTGCATAGTAACA 59.166 40.000 0.00 0.00 42.46 2.41
459 460 6.334102 AGACTAGCCATAGTGCATAGTAAC 57.666 41.667 0.00 0.00 42.46 2.50
460 461 6.978674 AAGACTAGCCATAGTGCATAGTAA 57.021 37.500 0.00 0.00 42.46 2.24
461 462 7.002276 TGTAAGACTAGCCATAGTGCATAGTA 58.998 38.462 0.00 0.00 42.46 1.82
462 463 5.833667 TGTAAGACTAGCCATAGTGCATAGT 59.166 40.000 0.00 0.00 42.46 2.12
463 464 6.332735 TGTAAGACTAGCCATAGTGCATAG 57.667 41.667 0.00 0.00 42.46 2.23
464 465 6.549736 TCTTGTAAGACTAGCCATAGTGCATA 59.450 38.462 0.00 0.00 42.46 3.14
465 466 5.363868 TCTTGTAAGACTAGCCATAGTGCAT 59.636 40.000 0.00 0.00 42.46 3.96
466 467 4.709886 TCTTGTAAGACTAGCCATAGTGCA 59.290 41.667 0.00 0.00 42.46 4.57
467 468 5.263968 TCTTGTAAGACTAGCCATAGTGC 57.736 43.478 0.00 0.00 42.46 4.40
480 481 4.659111 TCCACGAAACTGTCTTGTAAGA 57.341 40.909 0.00 0.00 0.00 2.10
481 482 4.025145 GGTTCCACGAAACTGTCTTGTAAG 60.025 45.833 0.00 0.00 0.00 2.34
482 483 3.872771 GGTTCCACGAAACTGTCTTGTAA 59.127 43.478 0.00 0.00 0.00 2.41
483 484 3.133362 AGGTTCCACGAAACTGTCTTGTA 59.867 43.478 0.00 0.00 38.26 2.41
484 485 2.093128 AGGTTCCACGAAACTGTCTTGT 60.093 45.455 0.00 0.00 38.26 3.16
485 486 2.561569 AGGTTCCACGAAACTGTCTTG 58.438 47.619 0.00 0.00 38.26 3.02
486 487 3.203716 GAAGGTTCCACGAAACTGTCTT 58.796 45.455 0.00 0.00 38.80 3.01
487 488 2.484947 GGAAGGTTCCACGAAACTGTCT 60.485 50.000 3.73 0.00 46.76 3.41
488 489 1.871676 GGAAGGTTCCACGAAACTGTC 59.128 52.381 3.73 0.00 46.76 3.51
489 490 1.963172 GGAAGGTTCCACGAAACTGT 58.037 50.000 3.73 0.00 46.76 3.55
498 499 6.999084 CTGAAAACCAGGTGGAAGGTTCCA 62.999 50.000 7.39 7.39 46.92 3.53
499 500 1.961394 GAAAACCAGGTGGAAGGTTCC 59.039 52.381 2.10 1.42 46.92 3.62
500 501 2.623416 CTGAAAACCAGGTGGAAGGTTC 59.377 50.000 2.10 1.63 46.92 3.62
502 503 1.850345 TCTGAAAACCAGGTGGAAGGT 59.150 47.619 2.10 0.00 43.12 3.50
503 504 2.656947 TCTGAAAACCAGGTGGAAGG 57.343 50.000 2.10 0.00 43.12 3.46
504 505 2.887152 CCTTCTGAAAACCAGGTGGAAG 59.113 50.000 2.10 3.07 43.12 3.46
505 506 2.243736 ACCTTCTGAAAACCAGGTGGAA 59.756 45.455 2.10 0.00 43.12 3.53
506 507 1.850345 ACCTTCTGAAAACCAGGTGGA 59.150 47.619 2.10 0.00 43.12 4.02
507 508 2.364972 ACCTTCTGAAAACCAGGTGG 57.635 50.000 0.00 0.00 43.12 4.61
508 509 2.623416 GGAACCTTCTGAAAACCAGGTG 59.377 50.000 0.00 0.00 43.12 4.00
509 510 2.243736 TGGAACCTTCTGAAAACCAGGT 59.756 45.455 0.00 0.00 43.12 4.00
510 511 2.623416 GTGGAACCTTCTGAAAACCAGG 59.377 50.000 0.00 0.00 43.12 4.45
511 512 3.287222 TGTGGAACCTTCTGAAAACCAG 58.713 45.455 0.00 0.00 39.41 4.00
512 513 3.374042 TGTGGAACCTTCTGAAAACCA 57.626 42.857 0.00 0.00 34.36 3.67
513 514 3.636764 ACATGTGGAACCTTCTGAAAACC 59.363 43.478 0.00 0.00 34.36 3.27
514 515 4.918810 ACATGTGGAACCTTCTGAAAAC 57.081 40.909 0.00 0.00 34.36 2.43
515 516 5.200483 AGAACATGTGGAACCTTCTGAAAA 58.800 37.500 0.00 0.00 34.36 2.29
516 517 4.792068 AGAACATGTGGAACCTTCTGAAA 58.208 39.130 0.00 0.00 34.36 2.69
517 518 4.437682 AGAACATGTGGAACCTTCTGAA 57.562 40.909 0.00 0.00 34.36 3.02
518 519 4.437682 AAGAACATGTGGAACCTTCTGA 57.562 40.909 0.00 0.00 34.36 3.27
519 520 5.520376 AAAAGAACATGTGGAACCTTCTG 57.480 39.130 0.00 0.00 34.36 3.02
520 521 7.839680 ATTAAAAGAACATGTGGAACCTTCT 57.160 32.000 0.00 0.00 34.36 2.85
521 522 8.573035 TGTATTAAAAGAACATGTGGAACCTTC 58.427 33.333 0.00 0.00 34.36 3.46
522 523 8.357402 GTGTATTAAAAGAACATGTGGAACCTT 58.643 33.333 0.00 0.00 34.36 3.50
523 524 7.504238 TGTGTATTAAAAGAACATGTGGAACCT 59.496 33.333 0.00 0.00 34.36 3.50
524 525 7.653647 TGTGTATTAAAAGAACATGTGGAACC 58.346 34.615 0.00 0.00 34.36 3.62
525 526 9.691362 AATGTGTATTAAAAGAACATGTGGAAC 57.309 29.630 0.00 0.00 32.04 3.62
526 527 9.689976 CAATGTGTATTAAAAGAACATGTGGAA 57.310 29.630 0.00 0.00 32.04 3.53
527 528 9.072375 TCAATGTGTATTAAAAGAACATGTGGA 57.928 29.630 0.00 0.00 32.04 4.02
528 529 9.689976 TTCAATGTGTATTAAAAGAACATGTGG 57.310 29.630 0.00 0.00 32.04 4.17
738 741 5.801350 TGTATCATTCAGAAAAGGCTTCG 57.199 39.130 0.00 0.00 0.00 3.79
829 839 6.980593 TGGAAAACAATGTTCATGACCTTAG 58.019 36.000 0.00 0.00 0.00 2.18
830 840 6.775142 TCTGGAAAACAATGTTCATGACCTTA 59.225 34.615 0.00 0.00 0.00 2.69
833 844 5.452078 TCTGGAAAACAATGTTCATGACC 57.548 39.130 0.00 0.00 0.00 4.02
882 893 7.409026 CGCATATACGTAATCTAAACCAAGACG 60.409 40.741 0.00 0.00 0.00 4.18
883 894 7.592533 TCGCATATACGTAATCTAAACCAAGAC 59.407 37.037 0.00 0.00 0.00 3.01
907 918 1.154225 GTCATGTTGGCGGCTTTCG 60.154 57.895 11.43 0.00 42.76 3.46
908 919 1.212751 GGTCATGTTGGCGGCTTTC 59.787 57.895 11.43 0.95 0.00 2.62
940 953 0.037605 ACGGTTCGAGGGTTTAGCTG 60.038 55.000 0.00 0.00 0.00 4.24
1304 1320 1.122019 AACAGAGAAGAGGGCACGGT 61.122 55.000 0.00 0.00 0.00 4.83
1356 1372 7.288317 CTGTTAATCAGAACTGAAGTGCTAG 57.712 40.000 8.59 0.00 46.27 3.42
1438 1454 3.869912 GCGCCACATTGTATATCTGGGAT 60.870 47.826 0.00 0.00 0.00 3.85
1480 1496 1.002134 AATGGAGGACACGCCCTTG 60.002 57.895 0.00 0.00 36.49 3.61
1535 1559 2.705730 GCCCTCTTTCTCCACTTTCTC 58.294 52.381 0.00 0.00 0.00 2.87
1547 1571 1.812571 CAGTATGTTTGCGCCCTCTTT 59.187 47.619 4.18 0.00 0.00 2.52
1618 1642 2.447443 ACCTCGAGATGCTTGTACTCA 58.553 47.619 15.71 0.00 0.00 3.41
1651 1675 4.074970 ACCAATCAGACACAGTTCCATTC 58.925 43.478 0.00 0.00 0.00 2.67
1665 1689 2.232208 GGCCAAAGGAGAAACCAATCAG 59.768 50.000 0.00 0.00 42.04 2.90
1678 1703 4.659172 TCACGCCTGGGCCAAAGG 62.659 66.667 17.54 17.54 37.98 3.11
1686 1711 4.142403 ACATCAACATATTTTCACGCCTGG 60.142 41.667 0.00 0.00 0.00 4.45
1729 1754 4.036498 CCAAGATCAGAATCTGCATCCAAC 59.964 45.833 5.18 0.00 41.54 3.77
1749 1774 1.203441 AGCCTGTCAGCCTCATCCAA 61.203 55.000 0.00 0.00 0.00 3.53
2010 2035 5.236478 GCTATCAATAAAAGGCGAACTGCTA 59.764 40.000 0.00 0.00 45.43 3.49
2018 2043 2.349817 CGGCAGCTATCAATAAAAGGCG 60.350 50.000 0.00 0.00 37.45 5.52
2046 2071 7.561722 TCAGAGGTCTACTGTAATCAGCTAAAT 59.438 37.037 0.00 0.00 44.77 1.40
2074 2099 9.814899 TGACAAAATCATGACAAACAATAAACT 57.185 25.926 0.00 0.00 29.99 2.66
2099 2124 8.596271 TTGATTTTCATATGCAGCCAATATTG 57.404 30.769 8.58 8.58 0.00 1.90
2107 2132 7.766219 AACAAGATTGATTTTCATATGCAGC 57.234 32.000 0.00 0.00 0.00 5.25
2226 2251 2.987821 TGAAATTTGCACGCATCATGTG 59.012 40.909 0.00 0.00 40.32 3.21
2291 2316 1.202806 TCAAGGAAGACCAAGGTGCAG 60.203 52.381 0.00 0.00 38.94 4.41
2459 2484 6.061441 CAGTATAAAGCCACCATATGTCCAA 58.939 40.000 1.24 0.00 0.00 3.53
2463 2488 6.247229 TGTCAGTATAAAGCCACCATATGT 57.753 37.500 1.24 0.00 0.00 2.29
2505 2532 4.724074 AACATGGTGGCAATCAATACAG 57.276 40.909 0.00 0.00 0.00 2.74
2529 2556 1.048601 ACGTGGGCCCTACATATGAG 58.951 55.000 25.70 8.05 0.00 2.90
2557 2584 2.376109 AGAGCTGAAAATGATGCCAGG 58.624 47.619 0.00 0.00 0.00 4.45
2572 2599 4.829492 ACTAAAATGCCACTTGAAAGAGCT 59.171 37.500 0.00 0.00 32.62 4.09
2656 2683 4.454678 ACCATAGCACTGGAATGTATGTG 58.545 43.478 11.20 0.00 39.73 3.21
2657 2684 4.410228 AGACCATAGCACTGGAATGTATGT 59.590 41.667 11.20 0.00 39.73 2.29
2658 2685 4.965814 AGACCATAGCACTGGAATGTATG 58.034 43.478 11.20 0.00 39.73 2.39
2659 2686 5.636903 AAGACCATAGCACTGGAATGTAT 57.363 39.130 11.20 0.00 39.73 2.29
2666 2693 2.119495 AGGGTAAGACCATAGCACTGG 58.881 52.381 3.19 3.19 41.02 4.00
2667 2694 3.452627 AGAAGGGTAAGACCATAGCACTG 59.547 47.826 0.00 0.00 41.02 3.66
2777 2967 2.126914 CAGTACGACCTGCTCTATGC 57.873 55.000 0.00 0.00 43.25 3.14
2932 3122 2.620115 CAACAAGACAGCCAACACAGAT 59.380 45.455 0.00 0.00 0.00 2.90
2984 3174 5.957771 AACTCAACATAAGCATCCTCCTA 57.042 39.130 0.00 0.00 0.00 2.94
2998 3188 5.355910 ACCTCGAAGCTTTAAAAACTCAACA 59.644 36.000 0.00 0.00 0.00 3.33
3004 3194 4.974275 GGAACACCTCGAAGCTTTAAAAAC 59.026 41.667 0.00 0.00 0.00 2.43
3135 3329 8.861033 TCAGCATGACAAAATGATATTTAAGC 57.139 30.769 0.00 0.00 42.56 3.09
3178 3372 2.652893 CTAATCTGCGGCGCAAAGGC 62.653 60.000 35.41 7.43 38.41 4.35
3185 3379 3.622756 CTGCTCTAATCTGCGGCG 58.377 61.111 0.51 0.51 0.00 6.46
3188 3382 1.933005 GCAGCTGCTCTAATCTGCG 59.067 57.895 31.33 0.00 41.80 5.18
3285 3479 4.037446 CCTTTCCACCTGAAAATGAACGAA 59.963 41.667 0.00 0.00 42.25 3.85
3508 3702 7.946219 TCACATATCATCATTTAATGGCCTTCT 59.054 33.333 3.32 0.00 0.00 2.85
3509 3703 8.114331 TCACATATCATCATTTAATGGCCTTC 57.886 34.615 3.32 0.00 0.00 3.46
3656 3853 7.868415 CCCACTGCTGATACTAGATAAACTTAC 59.132 40.741 0.00 0.00 0.00 2.34
3684 3881 3.499338 AGGCAGGAAACATGTCATCAAA 58.501 40.909 0.00 0.00 0.00 2.69
3689 3886 1.133513 ACCAAGGCAGGAAACATGTCA 60.134 47.619 0.00 0.00 0.00 3.58
3690 3887 1.620822 ACCAAGGCAGGAAACATGTC 58.379 50.000 0.00 0.00 0.00 3.06
3691 3888 1.963515 GAACCAAGGCAGGAAACATGT 59.036 47.619 0.00 0.00 0.00 3.21
3703 3900 0.038744 ATCCCTGCAGTGAACCAAGG 59.961 55.000 13.81 3.90 0.00 3.61
3704 3901 2.787473 TATCCCTGCAGTGAACCAAG 57.213 50.000 13.81 0.00 0.00 3.61
3731 3928 1.301677 CCTTCTGGCGCTGTTTCTCC 61.302 60.000 7.64 0.00 0.00 3.71
3851 4048 1.589716 GGATTGTCTGGCGCTGCTTT 61.590 55.000 7.64 0.00 0.00 3.51
3968 4165 3.702048 TCGGAGCCTCCAAACCCG 61.702 66.667 12.13 0.00 35.91 5.28
3983 4180 3.744719 TCCGAGCCTTCACCGTCG 61.745 66.667 0.00 0.00 0.00 5.12
4236 4435 2.030946 GCCTCGCACTAAACTATGCAAG 59.969 50.000 0.00 0.00 42.17 4.01
4241 4440 3.454371 AATCGCCTCGCACTAAACTAT 57.546 42.857 0.00 0.00 0.00 2.12
4365 4625 3.618690 AGCTTCATCCTGGTCTGTTAC 57.381 47.619 0.00 0.00 0.00 2.50
4497 4758 9.154847 TGTCAAACTCTGAATCTATGTTACATG 57.845 33.333 8.26 0.00 35.22 3.21
4499 4760 7.819415 CCTGTCAAACTCTGAATCTATGTTACA 59.181 37.037 0.00 0.00 35.22 2.41
4600 5356 1.882912 ATATGTGGCAGCACGGTATG 58.117 50.000 0.00 0.00 0.00 2.39
4646 5403 4.547406 GGTATTGCCTTGGTATTTCGTC 57.453 45.455 0.00 0.00 0.00 4.20
4673 5430 3.330720 GTCCACCTGGGTCCTGGG 61.331 72.222 15.80 7.70 39.05 4.45
4674 5431 3.330720 GGTCCACCTGGGTCCTGG 61.331 72.222 10.83 10.83 41.23 4.45
4675 5432 3.706373 CGGTCCACCTGGGTCCTG 61.706 72.222 0.00 0.00 42.16 3.86
4705 5462 3.002791 TCCTTGCATCGTTTCATCTGTC 58.997 45.455 0.00 0.00 0.00 3.51
4717 5477 1.407979 CCAGGCATTTCTCCTTGCATC 59.592 52.381 0.00 0.00 40.66 3.91
4734 5494 4.584518 TATGCCATGGCCGCCCAG 62.585 66.667 33.44 0.00 46.24 4.45
4754 5514 7.627939 GCATATCTCATGGTATTTCCTGATTGC 60.628 40.741 0.00 0.00 37.07 3.56
4762 5522 5.583854 AGCATCGCATATCTCATGGTATTTC 59.416 40.000 0.00 0.00 0.00 2.17
4808 5568 1.469917 CGCCGCATATTTCTTTGCTG 58.530 50.000 0.00 0.00 36.71 4.41
4809 5569 0.381801 CCGCCGCATATTTCTTTGCT 59.618 50.000 0.00 0.00 36.71 3.91
4852 5612 2.880268 CTGAATTGTGTCAGTTCCAGCA 59.120 45.455 3.36 0.00 40.22 4.41
4901 5663 5.587844 GTCATCAGCTCATCAAATAGGTGTT 59.412 40.000 0.00 0.00 41.03 3.32
4924 5686 8.192774 CCATGTTAACATTATGCAATTCTGAGT 58.807 33.333 18.50 0.00 33.61 3.41
5016 5779 0.890683 CATGGAGGGAAAACAGCACC 59.109 55.000 0.00 0.00 0.00 5.01
5038 5801 2.819608 ACACCAGTTCATCAAAATCGGG 59.180 45.455 0.00 0.00 0.00 5.14
5040 5803 6.578545 CAGTAAACACCAGTTCATCAAAATCG 59.421 38.462 0.00 0.00 36.84 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.