Multiple sequence alignment - TraesCS3B01G115000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G115000 chr3B 100.000 3013 0 0 1 3013 81335211 81332199 0.000000e+00 5565.0
1 TraesCS3B01G115000 chr3B 91.554 296 21 4 1914 2207 81333150 81332857 3.620000e-109 405.0
2 TraesCS3B01G115000 chr3B 91.554 296 21 4 2062 2355 81333298 81333005 3.620000e-109 405.0
3 TraesCS3B01G115000 chr3B 92.466 146 9 2 1914 2058 81333003 81332859 1.090000e-49 207.0
4 TraesCS3B01G115000 chr3B 92.466 146 9 2 2209 2353 81333298 81333154 1.090000e-49 207.0
5 TraesCS3B01G115000 chr3B 100.000 31 0 0 2361 2391 642888296 642888326 1.170000e-04 58.4
6 TraesCS3B01G115000 chr3B 100.000 31 0 0 2361 2391 786498010 786497980 1.170000e-04 58.4
7 TraesCS3B01G115000 chr3A 93.460 1636 57 23 243 1852 63838897 63837286 0.000000e+00 2383.0
8 TraesCS3B01G115000 chr3A 90.955 199 18 0 2815 3013 63835402 63835204 4.950000e-68 268.0
9 TraesCS3B01G115000 chr3A 94.595 74 3 1 1868 1940 63837301 63837228 2.450000e-21 113.0
10 TraesCS3B01G115000 chr3D 95.290 1189 27 12 672 1852 50881036 50879869 0.000000e+00 1858.0
11 TraesCS3B01G115000 chr3D 93.850 439 15 6 243 670 50881507 50881070 0.000000e+00 651.0
12 TraesCS3B01G115000 chr3D 97.200 250 6 1 2764 3013 50879175 50878927 3.590000e-114 422.0
13 TraesCS3B01G115000 chr3D 97.119 243 5 2 2448 2690 50879688 50879448 2.800000e-110 409.0
14 TraesCS3B01G115000 chr7D 92.553 94 7 0 2471 2564 62232696 62232789 5.240000e-28 135.0
15 TraesCS3B01G115000 chr7D 93.478 92 5 1 2473 2564 62255595 62255685 5.240000e-28 135.0
16 TraesCS3B01G115000 chr6D 91.837 98 6 2 2467 2564 10745263 10745358 5.240000e-28 135.0
17 TraesCS3B01G115000 chr6D 92.473 93 6 1 2473 2564 467999702 467999610 6.780000e-27 132.0
18 TraesCS3B01G115000 chr4D 90.909 99 7 2 2466 2564 12648683 12648779 6.780000e-27 132.0
19 TraesCS3B01G115000 chr1D 92.473 93 5 2 2472 2564 315545658 315545748 6.780000e-27 132.0
20 TraesCS3B01G115000 chr2D 90.816 98 5 4 2468 2564 633225330 633225236 8.770000e-26 128.0
21 TraesCS3B01G115000 chr2B 91.579 95 5 3 2471 2564 768106357 768106449 8.770000e-26 128.0
22 TraesCS3B01G115000 chr1B 84.921 126 16 3 101 224 22900753 22900877 1.130000e-24 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G115000 chr3B 81332199 81335211 3012 True 1357.800000 5565 93.608000 1 3013 5 chr3B.!!$R2 3012
1 TraesCS3B01G115000 chr3A 63835204 63838897 3693 True 921.333333 2383 93.003333 243 3013 3 chr3A.!!$R1 2770
2 TraesCS3B01G115000 chr3D 50878927 50881507 2580 True 835.000000 1858 95.864750 243 3013 4 chr3D.!!$R1 2770

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
156 157 0.105039 CAGATGGGAGGTAAGACGGC 59.895 60.0 0.0 0.0 0.0 5.68 F
157 158 0.325296 AGATGGGAGGTAAGACGGCA 60.325 55.0 0.0 0.0 0.0 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1754 1823 0.179275 CACACGCGACACTTGAATCG 60.179 55.0 15.93 0.0 41.32 3.34 R
2061 3543 0.251653 AACGGCAGTAGGAGAGACCA 60.252 55.0 0.00 0.0 42.04 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 5.845391 AAAAACCATTCTTCTTCCGTGAA 57.155 34.783 0.00 0.00 0.00 3.18
41 42 6.405278 AAAAACCATTCTTCTTCCGTGAAT 57.595 33.333 0.00 0.00 0.00 2.57
42 43 7.519032 AAAAACCATTCTTCTTCCGTGAATA 57.481 32.000 0.00 0.00 0.00 1.75
43 44 6.743575 AAACCATTCTTCTTCCGTGAATAG 57.256 37.500 0.00 0.00 0.00 1.73
44 45 5.422214 ACCATTCTTCTTCCGTGAATAGT 57.578 39.130 0.00 0.00 0.00 2.12
45 46 6.540438 ACCATTCTTCTTCCGTGAATAGTA 57.460 37.500 0.00 0.00 0.00 1.82
46 47 6.574350 ACCATTCTTCTTCCGTGAATAGTAG 58.426 40.000 0.00 0.00 0.00 2.57
47 48 5.463724 CCATTCTTCTTCCGTGAATAGTAGC 59.536 44.000 0.00 0.00 0.00 3.58
48 49 5.654603 TTCTTCTTCCGTGAATAGTAGCA 57.345 39.130 0.00 0.00 0.00 3.49
49 50 4.995124 TCTTCTTCCGTGAATAGTAGCAC 58.005 43.478 0.00 0.00 0.00 4.40
50 51 4.461431 TCTTCTTCCGTGAATAGTAGCACA 59.539 41.667 0.00 0.00 34.78 4.57
51 52 5.127194 TCTTCTTCCGTGAATAGTAGCACAT 59.873 40.000 0.00 0.00 34.78 3.21
52 53 5.339008 TCTTCCGTGAATAGTAGCACATT 57.661 39.130 0.00 0.00 34.78 2.71
53 54 5.730550 TCTTCCGTGAATAGTAGCACATTT 58.269 37.500 0.00 0.00 34.78 2.32
54 55 6.170506 TCTTCCGTGAATAGTAGCACATTTT 58.829 36.000 0.00 0.00 34.78 1.82
55 56 6.653320 TCTTCCGTGAATAGTAGCACATTTTT 59.347 34.615 0.00 0.00 34.78 1.94
92 93 3.955771 AAAACAGTAACGCACATTCGT 57.044 38.095 0.00 0.00 45.58 3.85
98 99 3.253955 ACGCACATTCGTTGCTCC 58.746 55.556 0.00 0.00 40.07 4.70
99 100 1.301716 ACGCACATTCGTTGCTCCT 60.302 52.632 0.00 0.00 40.07 3.69
100 101 1.133253 CGCACATTCGTTGCTCCTG 59.867 57.895 0.00 0.00 0.00 3.86
101 102 1.503542 GCACATTCGTTGCTCCTGG 59.496 57.895 0.00 0.00 0.00 4.45
102 103 0.955428 GCACATTCGTTGCTCCTGGA 60.955 55.000 0.00 0.00 0.00 3.86
103 104 1.081892 CACATTCGTTGCTCCTGGAG 58.918 55.000 19.55 19.55 0.00 3.86
117 118 4.427312 CTCCTGGAGCAATTTTAACATGC 58.573 43.478 11.42 0.00 40.34 4.06
124 125 4.908966 GCAATTTTAACATGCTTTCGCT 57.091 36.364 0.00 0.00 37.12 4.93
125 126 5.268107 GCAATTTTAACATGCTTTCGCTT 57.732 34.783 0.00 0.00 37.12 4.68
126 127 6.388259 GCAATTTTAACATGCTTTCGCTTA 57.612 33.333 0.00 0.00 37.12 3.09
127 128 6.233500 GCAATTTTAACATGCTTTCGCTTAC 58.766 36.000 0.00 0.00 37.12 2.34
128 129 6.669741 GCAATTTTAACATGCTTTCGCTTACC 60.670 38.462 0.00 0.00 37.12 2.85
129 130 4.428615 TTTAACATGCTTTCGCTTACCC 57.571 40.909 0.00 0.00 36.97 3.69
130 131 1.173913 AACATGCTTTCGCTTACCCC 58.826 50.000 0.00 0.00 36.97 4.95
131 132 0.328258 ACATGCTTTCGCTTACCCCT 59.672 50.000 0.00 0.00 36.97 4.79
132 133 1.017387 CATGCTTTCGCTTACCCCTC 58.983 55.000 0.00 0.00 36.97 4.30
133 134 0.912486 ATGCTTTCGCTTACCCCTCT 59.088 50.000 0.00 0.00 36.97 3.69
134 135 0.690762 TGCTTTCGCTTACCCCTCTT 59.309 50.000 0.00 0.00 36.97 2.85
135 136 1.073284 TGCTTTCGCTTACCCCTCTTT 59.927 47.619 0.00 0.00 36.97 2.52
136 137 2.160205 GCTTTCGCTTACCCCTCTTTT 58.840 47.619 0.00 0.00 0.00 2.27
137 138 2.161808 GCTTTCGCTTACCCCTCTTTTC 59.838 50.000 0.00 0.00 0.00 2.29
138 139 3.408634 CTTTCGCTTACCCCTCTTTTCA 58.591 45.455 0.00 0.00 0.00 2.69
139 140 2.762535 TCGCTTACCCCTCTTTTCAG 57.237 50.000 0.00 0.00 0.00 3.02
140 141 2.253610 TCGCTTACCCCTCTTTTCAGA 58.746 47.619 0.00 0.00 0.00 3.27
141 142 2.838202 TCGCTTACCCCTCTTTTCAGAT 59.162 45.455 0.00 0.00 0.00 2.90
142 143 2.939103 CGCTTACCCCTCTTTTCAGATG 59.061 50.000 0.00 0.00 0.00 2.90
143 144 3.282885 GCTTACCCCTCTTTTCAGATGG 58.717 50.000 0.00 0.00 35.15 3.51
147 148 2.725221 CCCTCTTTTCAGATGGGAGG 57.275 55.000 0.00 0.00 38.71 4.30
148 149 1.918957 CCCTCTTTTCAGATGGGAGGT 59.081 52.381 0.00 0.00 41.20 3.85
149 150 3.115390 CCCTCTTTTCAGATGGGAGGTA 58.885 50.000 0.00 0.00 41.20 3.08
150 151 3.523564 CCCTCTTTTCAGATGGGAGGTAA 59.476 47.826 0.00 0.00 41.20 2.85
151 152 4.384647 CCCTCTTTTCAGATGGGAGGTAAG 60.385 50.000 0.00 0.00 41.20 2.34
152 153 4.471386 CCTCTTTTCAGATGGGAGGTAAGA 59.529 45.833 0.00 0.00 38.83 2.10
153 154 5.422214 TCTTTTCAGATGGGAGGTAAGAC 57.578 43.478 0.00 0.00 0.00 3.01
154 155 3.887621 TTTCAGATGGGAGGTAAGACG 57.112 47.619 0.00 0.00 0.00 4.18
155 156 1.776662 TCAGATGGGAGGTAAGACGG 58.223 55.000 0.00 0.00 0.00 4.79
156 157 0.105039 CAGATGGGAGGTAAGACGGC 59.895 60.000 0.00 0.00 0.00 5.68
157 158 0.325296 AGATGGGAGGTAAGACGGCA 60.325 55.000 0.00 0.00 0.00 5.69
158 159 0.539986 GATGGGAGGTAAGACGGCAA 59.460 55.000 0.00 0.00 0.00 4.52
159 160 0.988832 ATGGGAGGTAAGACGGCAAA 59.011 50.000 0.00 0.00 0.00 3.68
160 161 0.766131 TGGGAGGTAAGACGGCAAAA 59.234 50.000 0.00 0.00 0.00 2.44
161 162 1.271163 TGGGAGGTAAGACGGCAAAAG 60.271 52.381 0.00 0.00 0.00 2.27
162 163 1.271217 GGGAGGTAAGACGGCAAAAGT 60.271 52.381 0.00 0.00 0.00 2.66
163 164 2.501261 GGAGGTAAGACGGCAAAAGTT 58.499 47.619 0.00 0.00 0.00 2.66
164 165 3.557686 GGGAGGTAAGACGGCAAAAGTTA 60.558 47.826 0.00 0.00 0.00 2.24
165 166 4.067192 GGAGGTAAGACGGCAAAAGTTAA 58.933 43.478 0.00 0.00 0.00 2.01
166 167 4.698780 GGAGGTAAGACGGCAAAAGTTAAT 59.301 41.667 0.00 0.00 0.00 1.40
167 168 5.163784 GGAGGTAAGACGGCAAAAGTTAATC 60.164 44.000 0.00 0.00 0.00 1.75
168 169 5.310451 AGGTAAGACGGCAAAAGTTAATCA 58.690 37.500 0.00 0.00 0.00 2.57
169 170 5.766174 AGGTAAGACGGCAAAAGTTAATCAA 59.234 36.000 0.00 0.00 0.00 2.57
170 171 6.263617 AGGTAAGACGGCAAAAGTTAATCAAA 59.736 34.615 0.00 0.00 0.00 2.69
171 172 6.361481 GGTAAGACGGCAAAAGTTAATCAAAC 59.639 38.462 0.00 0.00 38.46 2.93
192 193 9.624697 TCAAACTCATAACTTAATGCAATCAAC 57.375 29.630 0.00 0.00 0.00 3.18
193 194 8.577939 CAAACTCATAACTTAATGCAATCAACG 58.422 33.333 0.00 0.00 0.00 4.10
194 195 7.609760 ACTCATAACTTAATGCAATCAACGA 57.390 32.000 0.00 0.00 0.00 3.85
195 196 7.464358 ACTCATAACTTAATGCAATCAACGAC 58.536 34.615 0.00 0.00 0.00 4.34
196 197 7.334421 ACTCATAACTTAATGCAATCAACGACT 59.666 33.333 0.00 0.00 0.00 4.18
197 198 7.684670 TCATAACTTAATGCAATCAACGACTC 58.315 34.615 0.00 0.00 0.00 3.36
198 199 5.940192 AACTTAATGCAATCAACGACTCA 57.060 34.783 0.00 0.00 0.00 3.41
199 200 5.536554 ACTTAATGCAATCAACGACTCAG 57.463 39.130 0.00 0.00 0.00 3.35
200 201 5.237815 ACTTAATGCAATCAACGACTCAGA 58.762 37.500 0.00 0.00 0.00 3.27
201 202 5.877012 ACTTAATGCAATCAACGACTCAGAT 59.123 36.000 0.00 0.00 0.00 2.90
202 203 4.871993 AATGCAATCAACGACTCAGATC 57.128 40.909 0.00 0.00 0.00 2.75
203 204 3.599730 TGCAATCAACGACTCAGATCT 57.400 42.857 0.00 0.00 0.00 2.75
204 205 4.718940 TGCAATCAACGACTCAGATCTA 57.281 40.909 0.00 0.00 0.00 1.98
205 206 5.268118 TGCAATCAACGACTCAGATCTAT 57.732 39.130 0.00 0.00 0.00 1.98
206 207 5.664457 TGCAATCAACGACTCAGATCTATT 58.336 37.500 0.00 0.00 0.00 1.73
207 208 6.108687 TGCAATCAACGACTCAGATCTATTT 58.891 36.000 0.00 0.00 0.00 1.40
208 209 7.264947 TGCAATCAACGACTCAGATCTATTTA 58.735 34.615 0.00 0.00 0.00 1.40
209 210 7.928167 TGCAATCAACGACTCAGATCTATTTAT 59.072 33.333 0.00 0.00 0.00 1.40
210 211 9.411801 GCAATCAACGACTCAGATCTATTTATA 57.588 33.333 0.00 0.00 0.00 0.98
214 215 9.562408 TCAACGACTCAGATCTATTTATACTCT 57.438 33.333 0.00 0.00 0.00 3.24
215 216 9.820229 CAACGACTCAGATCTATTTATACTCTC 57.180 37.037 0.00 0.00 0.00 3.20
216 217 9.562408 AACGACTCAGATCTATTTATACTCTCA 57.438 33.333 0.00 0.00 0.00 3.27
217 218 8.995220 ACGACTCAGATCTATTTATACTCTCAC 58.005 37.037 0.00 0.00 0.00 3.51
218 219 8.447833 CGACTCAGATCTATTTATACTCTCACC 58.552 40.741 0.00 0.00 0.00 4.02
219 220 9.515226 GACTCAGATCTATTTATACTCTCACCT 57.485 37.037 0.00 0.00 0.00 4.00
220 221 9.515226 ACTCAGATCTATTTATACTCTCACCTC 57.485 37.037 0.00 0.00 0.00 3.85
221 222 9.739276 CTCAGATCTATTTATACTCTCACCTCT 57.261 37.037 0.00 0.00 0.00 3.69
222 223 9.733556 TCAGATCTATTTATACTCTCACCTCTC 57.266 37.037 0.00 0.00 0.00 3.20
223 224 9.513906 CAGATCTATTTATACTCTCACCTCTCA 57.486 37.037 0.00 0.00 0.00 3.27
224 225 9.515226 AGATCTATTTATACTCTCACCTCTCAC 57.485 37.037 0.00 0.00 0.00 3.51
225 226 8.644374 ATCTATTTATACTCTCACCTCTCACC 57.356 38.462 0.00 0.00 0.00 4.02
226 227 7.817440 TCTATTTATACTCTCACCTCTCACCT 58.183 38.462 0.00 0.00 0.00 4.00
227 228 6.723298 ATTTATACTCTCACCTCTCACCTG 57.277 41.667 0.00 0.00 0.00 4.00
228 229 3.748645 ATACTCTCACCTCTCACCTGT 57.251 47.619 0.00 0.00 0.00 4.00
229 230 4.864483 ATACTCTCACCTCTCACCTGTA 57.136 45.455 0.00 0.00 0.00 2.74
230 231 2.797786 ACTCTCACCTCTCACCTGTAC 58.202 52.381 0.00 0.00 0.00 2.90
231 232 2.108425 ACTCTCACCTCTCACCTGTACA 59.892 50.000 0.00 0.00 0.00 2.90
232 233 2.752354 CTCTCACCTCTCACCTGTACAG 59.248 54.545 16.34 16.34 0.00 2.74
233 234 2.108425 TCTCACCTCTCACCTGTACAGT 59.892 50.000 21.18 7.09 0.00 3.55
234 235 2.894126 CTCACCTCTCACCTGTACAGTT 59.106 50.000 21.18 4.32 0.00 3.16
235 236 2.628178 TCACCTCTCACCTGTACAGTTG 59.372 50.000 21.18 17.59 0.00 3.16
236 237 2.628178 CACCTCTCACCTGTACAGTTGA 59.372 50.000 20.44 20.44 0.00 3.18
237 238 2.894126 ACCTCTCACCTGTACAGTTGAG 59.106 50.000 33.29 33.29 45.75 3.02
238 239 2.232452 CCTCTCACCTGTACAGTTGAGG 59.768 54.545 35.94 29.28 44.86 3.86
239 240 3.157881 CTCTCACCTGTACAGTTGAGGA 58.842 50.000 35.94 25.48 44.86 3.71
240 241 3.766591 CTCTCACCTGTACAGTTGAGGAT 59.233 47.826 35.94 8.41 44.86 3.24
241 242 4.160329 TCTCACCTGTACAGTTGAGGATT 58.840 43.478 35.94 3.52 44.86 3.01
250 251 7.607991 CCTGTACAGTTGAGGATTATCAAAACT 59.392 37.037 21.18 0.00 40.72 2.66
258 260 7.615582 TGAGGATTATCAAAACTGCACTAAG 57.384 36.000 0.00 0.00 0.00 2.18
261 263 8.635765 AGGATTATCAAAACTGCACTAAGAAA 57.364 30.769 0.00 0.00 0.00 2.52
414 422 1.818060 TGAAGAAACCATTGGGCGATG 59.182 47.619 7.78 0.00 37.90 3.84
628 642 2.202892 GCCCCTCAACGGATCGAC 60.203 66.667 0.00 0.00 33.16 4.20
695 744 5.993106 GGCAACTAGTTTCTATAGCTTGG 57.007 43.478 5.07 0.00 0.00 3.61
786 839 4.268767 CGTAAGCGTGAGTATGAGTACA 57.731 45.455 0.00 0.00 33.09 2.90
807 860 6.636562 ACACGATCGTTAAGGATCTAGATT 57.363 37.500 26.95 10.78 40.52 2.40
962 1015 2.785562 CCTCCTCGTCGATCCTATCTT 58.214 52.381 0.00 0.00 0.00 2.40
963 1016 2.745281 CCTCCTCGTCGATCCTATCTTC 59.255 54.545 0.00 0.00 0.00 2.87
1004 1057 1.958715 CGTCACATCACGCCACCAA 60.959 57.895 0.00 0.00 31.96 3.67
1008 1061 0.518636 CACATCACGCCACCAAAGAG 59.481 55.000 0.00 0.00 0.00 2.85
1009 1062 0.396435 ACATCACGCCACCAAAGAGA 59.604 50.000 0.00 0.00 0.00 3.10
1016 1069 1.674221 CGCCACCAAAGAGAAGAGAGG 60.674 57.143 0.00 0.00 0.00 3.69
1025 1081 7.069331 CACCAAAGAGAAGAGAGGTATCTACAT 59.931 40.741 0.00 0.00 35.30 2.29
1038 1094 6.170506 AGGTATCTACATAGAGAAGAGCGAG 58.829 44.000 0.00 0.00 35.50 5.03
1045 1101 0.916086 AGAGAAGAGCGAGAGGGAGA 59.084 55.000 0.00 0.00 0.00 3.71
1046 1102 1.134098 AGAGAAGAGCGAGAGGGAGAG 60.134 57.143 0.00 0.00 0.00 3.20
1180 1236 2.509336 GTCCGGATCGTGCACCTG 60.509 66.667 7.81 2.09 0.00 4.00
1259 1315 3.414700 CGAACCACGTGCTCAGCC 61.415 66.667 10.91 0.00 37.22 4.85
1667 1735 2.356432 CCTTTCTGCATGGATGGTCTCA 60.356 50.000 0.00 0.00 0.00 3.27
1698 1766 4.150098 GTCTGATCGCGTGGTAAATATTCC 59.850 45.833 5.77 0.00 0.00 3.01
1721 1789 6.209192 TCCTGTTGCATGTCTCACATTTATTT 59.791 34.615 0.00 0.00 36.53 1.40
1754 1823 1.353022 TCCACCCCCAAGTGTACATTC 59.647 52.381 0.00 0.00 35.93 2.67
1778 1847 0.043053 CAAGTGTCGCGTGTGTGAAG 60.043 55.000 5.77 0.00 36.14 3.02
1840 1909 6.165577 AGTTTTGAACTTTGTGATTTGTGCT 58.834 32.000 0.00 0.00 39.04 4.40
1841 1910 6.650390 AGTTTTGAACTTTGTGATTTGTGCTT 59.350 30.769 0.00 0.00 39.04 3.91
1842 1911 7.173047 AGTTTTGAACTTTGTGATTTGTGCTTT 59.827 29.630 0.00 0.00 39.04 3.51
1843 1912 6.406093 TTGAACTTTGTGATTTGTGCTTTG 57.594 33.333 0.00 0.00 0.00 2.77
1844 1913 5.477510 TGAACTTTGTGATTTGTGCTTTGT 58.522 33.333 0.00 0.00 0.00 2.83
1845 1914 5.348179 TGAACTTTGTGATTTGTGCTTTGTG 59.652 36.000 0.00 0.00 0.00 3.33
1846 1915 5.070770 ACTTTGTGATTTGTGCTTTGTGA 57.929 34.783 0.00 0.00 0.00 3.58
1847 1916 4.864247 ACTTTGTGATTTGTGCTTTGTGAC 59.136 37.500 0.00 0.00 0.00 3.67
1848 1917 4.446994 TTGTGATTTGTGCTTTGTGACA 57.553 36.364 0.00 0.00 0.00 3.58
1849 1918 3.768406 TGTGATTTGTGCTTTGTGACAC 58.232 40.909 0.00 0.00 37.31 3.67
1850 1919 3.443329 TGTGATTTGTGCTTTGTGACACT 59.557 39.130 7.20 0.00 37.68 3.55
1851 1920 4.082300 TGTGATTTGTGCTTTGTGACACTT 60.082 37.500 7.20 0.00 37.68 3.16
1852 1921 4.864247 GTGATTTGTGCTTTGTGACACTTT 59.136 37.500 7.20 0.00 37.68 2.66
1853 1922 5.348451 GTGATTTGTGCTTTGTGACACTTTT 59.652 36.000 7.20 0.00 37.68 2.27
1854 1923 5.931146 TGATTTGTGCTTTGTGACACTTTTT 59.069 32.000 7.20 0.00 37.68 1.94
1925 1995 4.393371 GCTGTCAATTTTGGTCTCTCCTAC 59.607 45.833 0.00 0.00 37.07 3.18
1934 2004 2.097825 GGTCTCTCCTACTGCCGTTTA 58.902 52.381 0.00 0.00 0.00 2.01
1945 3427 8.428186 TCCTACTGCCGTTTATTTAAACATAG 57.572 34.615 12.33 9.19 44.29 2.23
1949 3431 7.532571 ACTGCCGTTTATTTAAACATAGGTTC 58.467 34.615 12.33 0.00 44.29 3.62
1967 3449 4.140663 AGGTTCTAGCCTACACATCCCTAT 60.141 45.833 0.00 0.00 37.04 2.57
2008 3490 6.036300 ACGTGTCTCATTCGTAAAACAAAGAA 59.964 34.615 0.00 0.00 36.05 2.52
2052 3534 6.595772 CGTAGACATCTACTACCTACGTTT 57.404 41.667 15.32 0.00 44.97 3.60
2053 3535 7.009568 CGTAGACATCTACTACCTACGTTTT 57.990 40.000 15.32 0.00 44.97 2.43
2054 3536 6.904011 CGTAGACATCTACTACCTACGTTTTG 59.096 42.308 15.32 0.00 44.97 2.44
2055 3537 6.205101 AGACATCTACTACCTACGTTTTGG 57.795 41.667 0.00 0.00 0.00 3.28
2056 3538 5.713861 AGACATCTACTACCTACGTTTTGGT 59.286 40.000 11.34 11.34 40.12 3.67
2057 3539 6.210185 AGACATCTACTACCTACGTTTTGGTT 59.790 38.462 11.75 0.28 37.74 3.67
2058 3540 6.393171 ACATCTACTACCTACGTTTTGGTTC 58.607 40.000 11.75 0.00 37.74 3.62
2059 3541 6.015180 ACATCTACTACCTACGTTTTGGTTCA 60.015 38.462 11.75 0.00 37.74 3.18
2060 3542 5.772521 TCTACTACCTACGTTTTGGTTCAC 58.227 41.667 11.75 0.00 37.74 3.18
2061 3543 4.677673 ACTACCTACGTTTTGGTTCACT 57.322 40.909 11.75 0.00 37.74 3.41
2062 3544 4.374399 ACTACCTACGTTTTGGTTCACTG 58.626 43.478 11.75 3.16 37.74 3.66
2063 3545 2.567985 ACCTACGTTTTGGTTCACTGG 58.432 47.619 0.00 0.00 31.62 4.00
2064 3546 2.092807 ACCTACGTTTTGGTTCACTGGT 60.093 45.455 0.00 0.00 31.62 4.00
2065 3547 2.546789 CCTACGTTTTGGTTCACTGGTC 59.453 50.000 0.00 0.00 0.00 4.02
2066 3548 2.413310 ACGTTTTGGTTCACTGGTCT 57.587 45.000 0.00 0.00 0.00 3.85
2067 3549 2.285977 ACGTTTTGGTTCACTGGTCTC 58.714 47.619 0.00 0.00 0.00 3.36
2068 3550 2.093128 ACGTTTTGGTTCACTGGTCTCT 60.093 45.455 0.00 0.00 0.00 3.10
2069 3551 2.544267 CGTTTTGGTTCACTGGTCTCTC 59.456 50.000 0.00 0.00 0.00 3.20
2070 3552 2.879026 GTTTTGGTTCACTGGTCTCTCC 59.121 50.000 0.00 0.00 0.00 3.71
2071 3553 2.103153 TTGGTTCACTGGTCTCTCCT 57.897 50.000 0.00 0.00 37.07 3.69
2072 3554 2.992847 TGGTTCACTGGTCTCTCCTA 57.007 50.000 0.00 0.00 37.07 2.94
2073 3555 2.526432 TGGTTCACTGGTCTCTCCTAC 58.474 52.381 0.00 0.00 37.07 3.18
2074 3556 2.110188 TGGTTCACTGGTCTCTCCTACT 59.890 50.000 0.00 0.00 37.07 2.57
2075 3557 2.494073 GGTTCACTGGTCTCTCCTACTG 59.506 54.545 0.00 0.00 37.07 2.74
2076 3558 1.840737 TCACTGGTCTCTCCTACTGC 58.159 55.000 0.00 0.00 37.07 4.40
2077 3559 0.820871 CACTGGTCTCTCCTACTGCC 59.179 60.000 0.00 0.00 37.07 4.85
2078 3560 0.681564 ACTGGTCTCTCCTACTGCCG 60.682 60.000 0.00 0.00 37.07 5.69
2079 3561 0.681564 CTGGTCTCTCCTACTGCCGT 60.682 60.000 0.00 0.00 37.07 5.68
2080 3562 0.251653 TGGTCTCTCCTACTGCCGTT 60.252 55.000 0.00 0.00 37.07 4.44
2081 3563 0.896226 GGTCTCTCCTACTGCCGTTT 59.104 55.000 0.00 0.00 0.00 3.60
2082 3564 2.097825 GGTCTCTCCTACTGCCGTTTA 58.902 52.381 0.00 0.00 0.00 2.01
2083 3565 2.694109 GGTCTCTCCTACTGCCGTTTAT 59.306 50.000 0.00 0.00 0.00 1.40
2084 3566 3.132467 GGTCTCTCCTACTGCCGTTTATT 59.868 47.826 0.00 0.00 0.00 1.40
2085 3567 4.382793 GGTCTCTCCTACTGCCGTTTATTT 60.383 45.833 0.00 0.00 0.00 1.40
2086 3568 5.163478 GGTCTCTCCTACTGCCGTTTATTTA 60.163 44.000 0.00 0.00 0.00 1.40
2087 3569 6.335777 GTCTCTCCTACTGCCGTTTATTTAA 58.664 40.000 0.00 0.00 0.00 1.52
2088 3570 6.815142 GTCTCTCCTACTGCCGTTTATTTAAA 59.185 38.462 0.00 0.00 0.00 1.52
2089 3571 6.815142 TCTCTCCTACTGCCGTTTATTTAAAC 59.185 38.462 3.59 3.59 41.51 2.01
2090 3572 6.465948 TCTCCTACTGCCGTTTATTTAAACA 58.534 36.000 12.33 0.00 44.29 2.83
2091 3573 7.107542 TCTCCTACTGCCGTTTATTTAAACAT 58.892 34.615 12.33 0.00 44.29 2.71
2092 3574 8.259411 TCTCCTACTGCCGTTTATTTAAACATA 58.741 33.333 12.33 0.00 44.29 2.29
2093 3575 8.967664 TCCTACTGCCGTTTATTTAAACATAT 57.032 30.769 12.33 0.00 44.29 1.78
2094 3576 8.832521 TCCTACTGCCGTTTATTTAAACATATG 58.167 33.333 12.33 0.00 44.29 1.78
2095 3577 8.617809 CCTACTGCCGTTTATTTAAACATATGT 58.382 33.333 1.41 1.41 44.29 2.29
2096 3578 9.997482 CTACTGCCGTTTATTTAAACATATGTT 57.003 29.630 15.47 15.47 44.29 2.71
2097 3579 8.905103 ACTGCCGTTTATTTAAACATATGTTC 57.095 30.769 21.02 5.68 44.29 3.18
2098 3580 8.736244 ACTGCCGTTTATTTAAACATATGTTCT 58.264 29.630 21.02 13.38 44.29 3.01
2101 3583 9.166126 GCCGTTTATTTAAACATATGTTCTAGC 57.834 33.333 21.02 8.21 44.29 3.42
2102 3584 9.659830 CCGTTTATTTAAACATATGTTCTAGCC 57.340 33.333 21.02 4.87 44.29 3.93
2112 3594 7.425224 ACATATGTTCTAGCCTATACATCCC 57.575 40.000 1.41 0.00 33.58 3.85
2113 3595 7.192628 ACATATGTTCTAGCCTATACATCCCT 58.807 38.462 1.41 0.00 33.58 4.20
2114 3596 8.344546 ACATATGTTCTAGCCTATACATCCCTA 58.655 37.037 1.41 0.00 33.58 3.53
2115 3597 8.634444 CATATGTTCTAGCCTATACATCCCTAC 58.366 40.741 3.67 0.00 33.58 3.18
2116 3598 5.960704 TGTTCTAGCCTATACATCCCTACA 58.039 41.667 0.00 0.00 0.00 2.74
2117 3599 6.562228 TGTTCTAGCCTATACATCCCTACAT 58.438 40.000 0.00 0.00 0.00 2.29
2118 3600 7.705700 TGTTCTAGCCTATACATCCCTACATA 58.294 38.462 0.00 0.00 0.00 2.29
2119 3601 8.344546 TGTTCTAGCCTATACATCCCTACATAT 58.655 37.037 0.00 0.00 0.00 1.78
2120 3602 9.203163 GTTCTAGCCTATACATCCCTACATATT 57.797 37.037 0.00 0.00 0.00 1.28
2121 3603 9.784376 TTCTAGCCTATACATCCCTACATATTT 57.216 33.333 0.00 0.00 0.00 1.40
2122 3604 9.784376 TCTAGCCTATACATCCCTACATATTTT 57.216 33.333 0.00 0.00 0.00 1.82
2126 3608 9.614792 GCCTATACATCCCTACATATTTTAAGG 57.385 37.037 0.00 0.00 0.00 2.69
2150 3632 9.733556 AGGTATACATGTCTCATTTGTAAAACA 57.266 29.630 0.00 0.00 30.29 2.83
2199 3681 7.450124 TCGTAGACATCTATTACCTCCATTC 57.550 40.000 0.00 0.00 0.00 2.67
2200 3682 7.232188 TCGTAGACATCTATTACCTCCATTCT 58.768 38.462 0.00 0.00 0.00 2.40
2201 3683 7.175119 TCGTAGACATCTATTACCTCCATTCTG 59.825 40.741 0.00 0.00 0.00 3.02
2202 3684 6.678568 AGACATCTATTACCTCCATTCTGG 57.321 41.667 0.00 0.00 39.43 3.86
2203 3685 6.146760 AGACATCTATTACCTCCATTCTGGT 58.853 40.000 0.00 0.00 39.03 4.00
2204 3686 6.617371 AGACATCTATTACCTCCATTCTGGTT 59.383 38.462 0.00 0.00 39.03 3.67
2205 3687 7.127955 AGACATCTATTACCTCCATTCTGGTTT 59.872 37.037 0.00 0.00 39.03 3.27
2206 3688 8.331931 ACATCTATTACCTCCATTCTGGTTTA 57.668 34.615 0.00 0.00 39.03 2.01
2207 3689 8.211629 ACATCTATTACCTCCATTCTGGTTTAC 58.788 37.037 0.00 0.00 39.03 2.01
2208 3690 7.989947 TCTATTACCTCCATTCTGGTTTACT 57.010 36.000 0.00 0.00 39.03 2.24
2209 3691 7.792032 TCTATTACCTCCATTCTGGTTTACTG 58.208 38.462 0.00 0.00 39.03 2.74
2210 3692 3.721087 ACCTCCATTCTGGTTTACTGG 57.279 47.619 0.00 0.00 39.03 4.00
2211 3693 2.986728 ACCTCCATTCTGGTTTACTGGT 59.013 45.455 0.00 0.00 39.03 4.00
2212 3694 3.009143 ACCTCCATTCTGGTTTACTGGTC 59.991 47.826 0.00 0.00 39.03 4.02
2213 3695 3.264450 CCTCCATTCTGGTTTACTGGTCT 59.736 47.826 0.00 0.00 39.03 3.85
2214 3696 4.508662 CTCCATTCTGGTTTACTGGTCTC 58.491 47.826 0.00 0.00 39.03 3.36
2215 3697 4.168101 TCCATTCTGGTTTACTGGTCTCT 58.832 43.478 0.00 0.00 39.03 3.10
2216 3698 4.223032 TCCATTCTGGTTTACTGGTCTCTC 59.777 45.833 0.00 0.00 39.03 3.20
2217 3699 4.508662 CATTCTGGTTTACTGGTCTCTCC 58.491 47.826 0.00 0.00 0.00 3.71
2218 3700 3.544698 TCTGGTTTACTGGTCTCTCCT 57.455 47.619 0.00 0.00 37.07 3.69
2219 3701 4.669866 TCTGGTTTACTGGTCTCTCCTA 57.330 45.455 0.00 0.00 37.07 2.94
2220 3702 4.342359 TCTGGTTTACTGGTCTCTCCTAC 58.658 47.826 0.00 0.00 37.07 3.18
2221 3703 4.044317 TCTGGTTTACTGGTCTCTCCTACT 59.956 45.833 0.00 0.00 37.07 2.57
2222 3704 4.087182 TGGTTTACTGGTCTCTCCTACTG 58.913 47.826 0.00 0.00 37.07 2.74
2223 3705 3.119065 GGTTTACTGGTCTCTCCTACTGC 60.119 52.174 0.00 0.00 37.07 4.40
2224 3706 2.438800 TACTGGTCTCTCCTACTGCC 57.561 55.000 0.00 0.00 37.07 4.85
2225 3707 0.681564 ACTGGTCTCTCCTACTGCCG 60.682 60.000 0.00 0.00 37.07 5.69
2226 3708 0.681564 CTGGTCTCTCCTACTGCCGT 60.682 60.000 0.00 0.00 37.07 5.68
2227 3709 0.251653 TGGTCTCTCCTACTGCCGTT 60.252 55.000 0.00 0.00 37.07 4.44
2228 3710 0.896226 GGTCTCTCCTACTGCCGTTT 59.104 55.000 0.00 0.00 0.00 3.60
2229 3711 2.097825 GGTCTCTCCTACTGCCGTTTA 58.902 52.381 0.00 0.00 0.00 2.01
2230 3712 2.694109 GGTCTCTCCTACTGCCGTTTAT 59.306 50.000 0.00 0.00 0.00 1.40
2231 3713 3.132467 GGTCTCTCCTACTGCCGTTTATT 59.868 47.826 0.00 0.00 0.00 1.40
2232 3714 4.382793 GGTCTCTCCTACTGCCGTTTATTT 60.383 45.833 0.00 0.00 0.00 1.40
2233 3715 5.163478 GGTCTCTCCTACTGCCGTTTATTTA 60.163 44.000 0.00 0.00 0.00 1.40
2234 3716 6.335777 GTCTCTCCTACTGCCGTTTATTTAA 58.664 40.000 0.00 0.00 0.00 1.52
2235 3717 6.815142 GTCTCTCCTACTGCCGTTTATTTAAA 59.185 38.462 0.00 0.00 0.00 1.52
2236 3718 6.815142 TCTCTCCTACTGCCGTTTATTTAAAC 59.185 38.462 3.59 3.59 41.51 2.01
2237 3719 6.465948 TCTCCTACTGCCGTTTATTTAAACA 58.534 36.000 12.33 0.00 44.29 2.83
2238 3720 7.107542 TCTCCTACTGCCGTTTATTTAAACAT 58.892 34.615 12.33 0.00 44.29 2.71
2239 3721 8.259411 TCTCCTACTGCCGTTTATTTAAACATA 58.741 33.333 12.33 0.00 44.29 2.29
2240 3722 8.200364 TCCTACTGCCGTTTATTTAAACATAC 57.800 34.615 12.33 3.25 44.29 2.39
2241 3723 7.010367 TCCTACTGCCGTTTATTTAAACATACG 59.990 37.037 12.33 2.93 44.29 3.06
2242 3724 5.326292 ACTGCCGTTTATTTAAACATACGC 58.674 37.500 12.33 8.47 44.29 4.42
2243 3725 5.122711 ACTGCCGTTTATTTAAACATACGCT 59.877 36.000 12.33 0.00 44.29 5.07
2244 3726 5.940595 TGCCGTTTATTTAAACATACGCTT 58.059 33.333 12.33 0.00 44.29 4.68
2245 3727 6.022821 TGCCGTTTATTTAAACATACGCTTC 58.977 36.000 12.33 0.00 44.29 3.86
2246 3728 6.022821 GCCGTTTATTTAAACATACGCTTCA 58.977 36.000 12.33 0.00 44.29 3.02
2247 3729 6.193959 GCCGTTTATTTAAACATACGCTTCAG 59.806 38.462 12.33 0.00 44.29 3.02
2248 3730 6.193959 CCGTTTATTTAAACATACGCTTCAGC 59.806 38.462 12.33 0.00 44.29 4.26
2249 3731 6.193959 CGTTTATTTAAACATACGCTTCAGCC 59.806 38.462 12.33 0.00 44.29 4.85
2250 3732 6.995511 TTATTTAAACATACGCTTCAGCCT 57.004 33.333 0.00 0.00 37.91 4.58
2251 3733 8.392612 GTTTATTTAAACATACGCTTCAGCCTA 58.607 33.333 8.05 0.00 43.70 3.93
2252 3734 5.789710 TTTAAACATACGCTTCAGCCTAC 57.210 39.130 0.00 0.00 37.91 3.18
2253 3735 3.328382 AAACATACGCTTCAGCCTACA 57.672 42.857 0.00 0.00 37.91 2.74
2254 3736 2.295253 ACATACGCTTCAGCCTACAC 57.705 50.000 0.00 0.00 37.91 2.90
2255 3737 1.548719 ACATACGCTTCAGCCTACACA 59.451 47.619 0.00 0.00 37.91 3.72
2256 3738 2.168521 ACATACGCTTCAGCCTACACAT 59.831 45.455 0.00 0.00 37.91 3.21
2257 3739 2.579207 TACGCTTCAGCCTACACATC 57.421 50.000 0.00 0.00 37.91 3.06
2258 3740 0.108138 ACGCTTCAGCCTACACATCC 60.108 55.000 0.00 0.00 37.91 3.51
2259 3741 0.811616 CGCTTCAGCCTACACATCCC 60.812 60.000 0.00 0.00 37.91 3.85
2260 3742 0.543749 GCTTCAGCCTACACATCCCT 59.456 55.000 0.00 0.00 34.31 4.20
2261 3743 1.762957 GCTTCAGCCTACACATCCCTA 59.237 52.381 0.00 0.00 34.31 3.53
2262 3744 2.483889 GCTTCAGCCTACACATCCCTAC 60.484 54.545 0.00 0.00 34.31 3.18
2263 3745 2.543037 TCAGCCTACACATCCCTACA 57.457 50.000 0.00 0.00 0.00 2.74
2264 3746 3.046283 TCAGCCTACACATCCCTACAT 57.954 47.619 0.00 0.00 0.00 2.29
2265 3747 4.193240 TCAGCCTACACATCCCTACATA 57.807 45.455 0.00 0.00 0.00 2.29
2266 3748 4.752063 TCAGCCTACACATCCCTACATAT 58.248 43.478 0.00 0.00 0.00 1.78
2267 3749 5.155161 TCAGCCTACACATCCCTACATATT 58.845 41.667 0.00 0.00 0.00 1.28
2268 3750 5.606749 TCAGCCTACACATCCCTACATATTT 59.393 40.000 0.00 0.00 0.00 1.40
2269 3751 6.101150 TCAGCCTACACATCCCTACATATTTT 59.899 38.462 0.00 0.00 0.00 1.82
2270 3752 7.291416 TCAGCCTACACATCCCTACATATTTTA 59.709 37.037 0.00 0.00 0.00 1.52
2271 3753 7.936847 CAGCCTACACATCCCTACATATTTTAA 59.063 37.037 0.00 0.00 0.00 1.52
2272 3754 8.157476 AGCCTACACATCCCTACATATTTTAAG 58.843 37.037 0.00 0.00 0.00 1.85
2273 3755 7.390718 GCCTACACATCCCTACATATTTTAAGG 59.609 40.741 0.00 0.00 0.00 2.69
2274 3756 8.437575 CCTACACATCCCTACATATTTTAAGGT 58.562 37.037 0.00 0.00 0.00 3.50
2282 3764 9.985730 TCCCTACATATTTTAAGGTAATACGTG 57.014 33.333 0.00 0.00 0.00 4.49
2283 3765 9.768662 CCCTACATATTTTAAGGTAATACGTGT 57.231 33.333 0.00 0.00 0.00 4.49
2292 3774 8.836268 TTTAAGGTAATACGTGTCTCATTTGT 57.164 30.769 0.00 0.00 0.00 2.83
2293 3775 9.926158 TTTAAGGTAATACGTGTCTCATTTGTA 57.074 29.630 0.00 0.00 0.00 2.41
2294 3776 9.926158 TTAAGGTAATACGTGTCTCATTTGTAA 57.074 29.630 0.00 0.00 0.00 2.41
2295 3777 8.836268 AAGGTAATACGTGTCTCATTTGTAAA 57.164 30.769 0.00 0.00 0.00 2.01
2296 3778 8.836268 AGGTAATACGTGTCTCATTTGTAAAA 57.164 30.769 0.00 0.00 0.00 1.52
2297 3779 8.715088 AGGTAATACGTGTCTCATTTGTAAAAC 58.285 33.333 0.00 0.00 0.00 2.43
2298 3780 8.497554 GGTAATACGTGTCTCATTTGTAAAACA 58.502 33.333 0.00 0.00 0.00 2.83
2299 3781 9.866936 GTAATACGTGTCTCATTTGTAAAACAA 57.133 29.630 0.00 0.00 36.11 2.83
2320 3802 8.502161 AACAAAGAATAAAATACAAGTGACGC 57.498 30.769 0.00 0.00 0.00 5.19
2321 3803 7.644490 ACAAAGAATAAAATACAAGTGACGCA 58.356 30.769 0.00 0.00 0.00 5.24
2322 3804 7.803189 ACAAAGAATAAAATACAAGTGACGCAG 59.197 33.333 0.00 0.00 0.00 5.18
2323 3805 5.869350 AGAATAAAATACAAGTGACGCAGC 58.131 37.500 0.00 0.00 0.00 5.25
2324 3806 5.411361 AGAATAAAATACAAGTGACGCAGCA 59.589 36.000 0.00 0.00 0.00 4.41
2325 3807 3.542712 AAAATACAAGTGACGCAGCAG 57.457 42.857 0.00 0.00 0.00 4.24
2326 3808 2.169832 AATACAAGTGACGCAGCAGT 57.830 45.000 0.00 0.00 0.00 4.40
2327 3809 3.313012 AATACAAGTGACGCAGCAGTA 57.687 42.857 0.00 0.00 0.00 2.74
2328 3810 2.347697 TACAAGTGACGCAGCAGTAG 57.652 50.000 0.00 0.00 0.00 2.57
2329 3811 0.673985 ACAAGTGACGCAGCAGTAGA 59.326 50.000 0.00 0.00 0.00 2.59
2330 3812 1.063806 CAAGTGACGCAGCAGTAGAC 58.936 55.000 0.00 0.00 0.00 2.59
2331 3813 0.673985 AAGTGACGCAGCAGTAGACA 59.326 50.000 0.00 0.00 0.00 3.41
2332 3814 0.891373 AGTGACGCAGCAGTAGACAT 59.109 50.000 0.00 0.00 0.00 3.06
2333 3815 1.135257 AGTGACGCAGCAGTAGACATC 60.135 52.381 0.00 0.00 0.00 3.06
2334 3816 1.135257 GTGACGCAGCAGTAGACATCT 60.135 52.381 0.00 0.00 0.00 2.90
2335 3817 2.097629 GTGACGCAGCAGTAGACATCTA 59.902 50.000 0.00 0.00 0.00 1.98
2336 3818 2.097629 TGACGCAGCAGTAGACATCTAC 59.902 50.000 10.53 10.53 46.93 2.59
2345 3827 2.299521 GTAGACATCTACTGCCTCCGT 58.700 52.381 11.14 0.00 44.06 4.69
2346 3828 1.394618 AGACATCTACTGCCTCCGTC 58.605 55.000 0.00 0.00 0.00 4.79
2347 3829 1.064314 AGACATCTACTGCCTCCGTCT 60.064 52.381 0.00 0.00 0.00 4.18
2348 3830 1.751924 GACATCTACTGCCTCCGTCTT 59.248 52.381 0.00 0.00 0.00 3.01
2349 3831 1.478510 ACATCTACTGCCTCCGTCTTG 59.521 52.381 0.00 0.00 0.00 3.02
2350 3832 1.115467 ATCTACTGCCTCCGTCTTGG 58.885 55.000 0.00 0.00 40.09 3.61
2351 3833 0.251653 TCTACTGCCTCCGTCTTGGT 60.252 55.000 0.00 0.00 39.52 3.67
2352 3834 0.608640 CTACTGCCTCCGTCTTGGTT 59.391 55.000 0.00 0.00 39.52 3.67
2353 3835 1.002087 CTACTGCCTCCGTCTTGGTTT 59.998 52.381 0.00 0.00 39.52 3.27
2354 3836 1.053424 ACTGCCTCCGTCTTGGTTTA 58.947 50.000 0.00 0.00 39.52 2.01
2355 3837 1.628846 ACTGCCTCCGTCTTGGTTTAT 59.371 47.619 0.00 0.00 39.52 1.40
2356 3838 2.039879 ACTGCCTCCGTCTTGGTTTATT 59.960 45.455 0.00 0.00 39.52 1.40
2357 3839 3.262405 ACTGCCTCCGTCTTGGTTTATTA 59.738 43.478 0.00 0.00 39.52 0.98
2358 3840 3.869065 TGCCTCCGTCTTGGTTTATTAG 58.131 45.455 0.00 0.00 39.52 1.73
2362 3844 5.625197 GCCTCCGTCTTGGTTTATTAGTACA 60.625 44.000 0.00 0.00 39.52 2.90
2366 3848 7.262772 TCCGTCTTGGTTTATTAGTACATGAG 58.737 38.462 0.00 0.00 39.52 2.90
2591 4191 6.547141 CCCCATGAAAGTATCAAAAGAGCATA 59.453 38.462 0.00 0.00 42.54 3.14
2606 4206 4.360563 AGAGCATAAAACATCTACGGTCG 58.639 43.478 0.00 0.00 0.00 4.79
2633 4233 0.611618 TGATTGCAAGGGTCGCCAAT 60.612 50.000 4.94 0.00 0.00 3.16
2690 4291 4.982999 TGTAGAAGAGCAACATAGTCGAC 58.017 43.478 7.70 7.70 0.00 4.20
2691 4292 4.700692 TGTAGAAGAGCAACATAGTCGACT 59.299 41.667 23.66 23.66 0.00 4.18
2692 4293 4.103365 AGAAGAGCAACATAGTCGACTG 57.897 45.455 28.12 15.51 0.00 3.51
2693 4294 3.508012 AGAAGAGCAACATAGTCGACTGT 59.492 43.478 28.12 19.24 0.00 3.55
2694 4295 3.495670 AGAGCAACATAGTCGACTGTC 57.504 47.619 28.12 9.36 0.00 3.51
2695 4296 2.820197 AGAGCAACATAGTCGACTGTCA 59.180 45.455 28.12 8.81 0.00 3.58
2696 4297 3.445450 AGAGCAACATAGTCGACTGTCAT 59.555 43.478 28.12 10.98 0.00 3.06
2697 4298 3.775202 AGCAACATAGTCGACTGTCATC 58.225 45.455 28.12 12.03 0.00 2.92
2698 4299 2.860735 GCAACATAGTCGACTGTCATCC 59.139 50.000 28.12 8.61 0.00 3.51
2699 4300 3.676049 GCAACATAGTCGACTGTCATCCA 60.676 47.826 28.12 6.35 0.00 3.41
2700 4301 4.494484 CAACATAGTCGACTGTCATCCAA 58.506 43.478 28.12 5.53 0.00 3.53
2701 4302 4.377839 ACATAGTCGACTGTCATCCAAG 57.622 45.455 28.12 9.91 0.00 3.61
2702 4303 3.131223 ACATAGTCGACTGTCATCCAAGG 59.869 47.826 28.12 9.49 0.00 3.61
2703 4304 1.924731 AGTCGACTGTCATCCAAGGA 58.075 50.000 19.30 0.00 0.00 3.36
2704 4305 2.248248 AGTCGACTGTCATCCAAGGAA 58.752 47.619 19.30 0.00 0.00 3.36
2705 4306 2.834549 AGTCGACTGTCATCCAAGGAAT 59.165 45.455 19.30 0.00 0.00 3.01
2706 4307 4.023980 AGTCGACTGTCATCCAAGGAATA 58.976 43.478 19.30 0.00 0.00 1.75
2707 4308 4.098654 AGTCGACTGTCATCCAAGGAATAG 59.901 45.833 19.30 0.00 0.00 1.73
2708 4309 4.098044 GTCGACTGTCATCCAAGGAATAGA 59.902 45.833 8.70 0.00 0.00 1.98
2709 4310 4.339530 TCGACTGTCATCCAAGGAATAGAG 59.660 45.833 8.73 0.00 0.00 2.43
2710 4311 4.500545 CGACTGTCATCCAAGGAATAGAGG 60.501 50.000 8.73 0.00 0.00 3.69
2711 4312 3.713764 ACTGTCATCCAAGGAATAGAGGG 59.286 47.826 0.00 0.00 0.00 4.30
2712 4313 3.048600 TGTCATCCAAGGAATAGAGGGG 58.951 50.000 0.00 0.00 0.00 4.79
2713 4314 2.373502 GTCATCCAAGGAATAGAGGGGG 59.626 54.545 0.00 0.00 0.00 5.40
2735 4336 3.654414 GACCTCATCCATAGGCTTTACG 58.346 50.000 0.00 0.00 37.67 3.18
2736 4337 3.305720 ACCTCATCCATAGGCTTTACGA 58.694 45.455 0.00 0.00 37.67 3.43
2737 4338 3.322254 ACCTCATCCATAGGCTTTACGAG 59.678 47.826 0.00 0.00 37.67 4.18
2755 4356 1.823976 GCTCTAGTAGCCACCCACC 59.176 63.158 0.00 0.00 46.25 4.61
2756 4357 0.688087 GCTCTAGTAGCCACCCACCT 60.688 60.000 0.00 0.00 46.25 4.00
2757 4358 1.404843 CTCTAGTAGCCACCCACCTC 58.595 60.000 0.00 0.00 0.00 3.85
2758 4359 1.008403 TCTAGTAGCCACCCACCTCT 58.992 55.000 0.00 0.00 0.00 3.69
2759 4360 2.175069 CTCTAGTAGCCACCCACCTCTA 59.825 54.545 0.00 0.00 0.00 2.43
2760 4361 2.584031 TCTAGTAGCCACCCACCTCTAA 59.416 50.000 0.00 0.00 0.00 2.10
2761 4362 2.337359 AGTAGCCACCCACCTCTAAA 57.663 50.000 0.00 0.00 0.00 1.85
2762 4363 2.846950 AGTAGCCACCCACCTCTAAAT 58.153 47.619 0.00 0.00 0.00 1.40
2965 4765 5.455056 AACTGAAGTATCGAACTGTCACT 57.545 39.130 0.00 0.00 38.88 3.41
2979 4779 4.694339 ACTGTCACTGACTCCTAAACAAC 58.306 43.478 10.54 0.00 33.15 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 5.845391 TTCACGGAAGAAGAATGGTTTTT 57.155 34.783 0.00 0.00 0.00 1.94
19 20 6.715264 ACTATTCACGGAAGAAGAATGGTTTT 59.285 34.615 0.00 0.00 42.64 2.43
20 21 6.238648 ACTATTCACGGAAGAAGAATGGTTT 58.761 36.000 0.00 0.00 42.64 3.27
21 22 5.805728 ACTATTCACGGAAGAAGAATGGTT 58.194 37.500 0.00 0.00 42.64 3.67
22 23 5.422214 ACTATTCACGGAAGAAGAATGGT 57.578 39.130 0.00 0.00 41.58 3.55
23 24 5.463724 GCTACTATTCACGGAAGAAGAATGG 59.536 44.000 0.00 0.00 40.41 3.16
24 25 6.019479 GTGCTACTATTCACGGAAGAAGAATG 60.019 42.308 0.00 0.00 38.82 2.67
25 26 6.043411 GTGCTACTATTCACGGAAGAAGAAT 58.957 40.000 0.00 0.00 40.44 2.40
26 27 5.047590 TGTGCTACTATTCACGGAAGAAGAA 60.048 40.000 0.00 0.00 36.06 2.52
27 28 4.461431 TGTGCTACTATTCACGGAAGAAGA 59.539 41.667 0.00 0.00 36.06 2.87
28 29 4.744570 TGTGCTACTATTCACGGAAGAAG 58.255 43.478 0.00 0.00 36.06 2.85
29 30 4.794278 TGTGCTACTATTCACGGAAGAA 57.206 40.909 0.00 0.00 36.06 2.52
30 31 5.339008 AATGTGCTACTATTCACGGAAGA 57.661 39.130 0.00 0.00 36.06 2.87
31 32 6.422776 AAAATGTGCTACTATTCACGGAAG 57.577 37.500 0.00 0.00 36.06 3.46
32 33 6.811253 AAAAATGTGCTACTATTCACGGAA 57.189 33.333 0.00 0.00 36.06 4.30
71 72 4.281525 ACGAATGTGCGTTACTGTTTTT 57.718 36.364 0.00 0.00 42.71 1.94
72 73 3.955771 ACGAATGTGCGTTACTGTTTT 57.044 38.095 0.00 0.00 42.71 2.43
82 83 1.133253 CAGGAGCAACGAATGTGCG 59.867 57.895 0.00 0.00 37.29 5.34
83 84 0.955428 TCCAGGAGCAACGAATGTGC 60.955 55.000 0.00 0.00 0.00 4.57
84 85 1.081892 CTCCAGGAGCAACGAATGTG 58.918 55.000 2.60 0.00 0.00 3.21
85 86 3.540211 CTCCAGGAGCAACGAATGT 57.460 52.632 2.60 0.00 0.00 2.71
95 96 4.159135 AGCATGTTAAAATTGCTCCAGGAG 59.841 41.667 12.81 12.81 42.88 3.69
96 97 4.088634 AGCATGTTAAAATTGCTCCAGGA 58.911 39.130 0.00 0.00 42.88 3.86
97 98 4.460948 AGCATGTTAAAATTGCTCCAGG 57.539 40.909 0.00 0.00 42.88 4.45
98 99 5.061311 CGAAAGCATGTTAAAATTGCTCCAG 59.939 40.000 8.10 1.37 45.54 3.86
99 100 4.922692 CGAAAGCATGTTAAAATTGCTCCA 59.077 37.500 8.10 0.00 45.54 3.86
100 101 5.440260 CGAAAGCATGTTAAAATTGCTCC 57.560 39.130 8.10 4.26 45.54 4.70
117 118 3.408634 TGAAAAGAGGGGTAAGCGAAAG 58.591 45.455 0.00 0.00 0.00 2.62
118 119 3.071892 TCTGAAAAGAGGGGTAAGCGAAA 59.928 43.478 0.00 0.00 0.00 3.46
119 120 2.635915 TCTGAAAAGAGGGGTAAGCGAA 59.364 45.455 0.00 0.00 0.00 4.70
120 121 2.253610 TCTGAAAAGAGGGGTAAGCGA 58.746 47.619 0.00 0.00 0.00 4.93
121 122 2.762535 TCTGAAAAGAGGGGTAAGCG 57.237 50.000 0.00 0.00 0.00 4.68
122 123 3.282885 CCATCTGAAAAGAGGGGTAAGC 58.717 50.000 0.00 0.00 36.23 3.09
128 129 1.918957 ACCTCCCATCTGAAAAGAGGG 59.081 52.381 18.65 0.00 46.93 4.30
130 131 5.423886 GTCTTACCTCCCATCTGAAAAGAG 58.576 45.833 0.00 0.00 0.00 2.85
131 132 4.081642 CGTCTTACCTCCCATCTGAAAAGA 60.082 45.833 0.00 0.00 0.00 2.52
132 133 4.184629 CGTCTTACCTCCCATCTGAAAAG 58.815 47.826 0.00 0.00 0.00 2.27
133 134 3.055385 CCGTCTTACCTCCCATCTGAAAA 60.055 47.826 0.00 0.00 0.00 2.29
134 135 2.500098 CCGTCTTACCTCCCATCTGAAA 59.500 50.000 0.00 0.00 0.00 2.69
135 136 2.108168 CCGTCTTACCTCCCATCTGAA 58.892 52.381 0.00 0.00 0.00 3.02
136 137 1.776662 CCGTCTTACCTCCCATCTGA 58.223 55.000 0.00 0.00 0.00 3.27
137 138 0.105039 GCCGTCTTACCTCCCATCTG 59.895 60.000 0.00 0.00 0.00 2.90
138 139 0.325296 TGCCGTCTTACCTCCCATCT 60.325 55.000 0.00 0.00 0.00 2.90
139 140 0.539986 TTGCCGTCTTACCTCCCATC 59.460 55.000 0.00 0.00 0.00 3.51
140 141 0.988832 TTTGCCGTCTTACCTCCCAT 59.011 50.000 0.00 0.00 0.00 4.00
141 142 0.766131 TTTTGCCGTCTTACCTCCCA 59.234 50.000 0.00 0.00 0.00 4.37
142 143 1.271217 ACTTTTGCCGTCTTACCTCCC 60.271 52.381 0.00 0.00 0.00 4.30
143 144 2.180432 ACTTTTGCCGTCTTACCTCC 57.820 50.000 0.00 0.00 0.00 4.30
144 145 5.410439 TGATTAACTTTTGCCGTCTTACCTC 59.590 40.000 0.00 0.00 0.00 3.85
145 146 5.310451 TGATTAACTTTTGCCGTCTTACCT 58.690 37.500 0.00 0.00 0.00 3.08
146 147 5.616488 TGATTAACTTTTGCCGTCTTACC 57.384 39.130 0.00 0.00 0.00 2.85
147 148 7.136772 AGTTTGATTAACTTTTGCCGTCTTAC 58.863 34.615 0.00 0.00 44.73 2.34
148 149 7.012515 TGAGTTTGATTAACTTTTGCCGTCTTA 59.987 33.333 0.00 0.00 47.00 2.10
149 150 6.144078 AGTTTGATTAACTTTTGCCGTCTT 57.856 33.333 0.00 0.00 44.73 3.01
150 151 5.298276 TGAGTTTGATTAACTTTTGCCGTCT 59.702 36.000 0.00 0.00 47.00 4.18
151 152 5.516090 TGAGTTTGATTAACTTTTGCCGTC 58.484 37.500 0.00 0.00 47.00 4.79
152 153 5.508200 TGAGTTTGATTAACTTTTGCCGT 57.492 34.783 0.00 0.00 47.00 5.68
153 154 7.807907 AGTTATGAGTTTGATTAACTTTTGCCG 59.192 33.333 0.00 0.00 47.00 5.69
154 155 9.476202 AAGTTATGAGTTTGATTAACTTTTGCC 57.524 29.630 0.00 0.00 47.00 4.52
166 167 9.624697 GTTGATTGCATTAAGTTATGAGTTTGA 57.375 29.630 0.00 0.00 0.00 2.69
167 168 8.577939 CGTTGATTGCATTAAGTTATGAGTTTG 58.422 33.333 0.00 0.00 0.00 2.93
168 169 8.511321 TCGTTGATTGCATTAAGTTATGAGTTT 58.489 29.630 0.00 0.00 0.00 2.66
169 170 7.962918 GTCGTTGATTGCATTAAGTTATGAGTT 59.037 33.333 0.00 0.00 0.00 3.01
170 171 7.334421 AGTCGTTGATTGCATTAAGTTATGAGT 59.666 33.333 0.00 0.00 0.00 3.41
171 172 7.688372 AGTCGTTGATTGCATTAAGTTATGAG 58.312 34.615 0.00 0.00 0.00 2.90
172 173 7.333174 TGAGTCGTTGATTGCATTAAGTTATGA 59.667 33.333 0.00 0.00 0.00 2.15
173 174 7.463544 TGAGTCGTTGATTGCATTAAGTTATG 58.536 34.615 0.00 0.00 0.00 1.90
174 175 7.549134 TCTGAGTCGTTGATTGCATTAAGTTAT 59.451 33.333 0.00 0.00 0.00 1.89
175 176 6.871492 TCTGAGTCGTTGATTGCATTAAGTTA 59.129 34.615 0.00 0.00 0.00 2.24
176 177 5.700832 TCTGAGTCGTTGATTGCATTAAGTT 59.299 36.000 0.00 0.00 0.00 2.66
177 178 5.237815 TCTGAGTCGTTGATTGCATTAAGT 58.762 37.500 0.00 0.00 0.00 2.24
178 179 5.784750 TCTGAGTCGTTGATTGCATTAAG 57.215 39.130 0.00 0.00 0.00 1.85
179 180 6.108687 AGATCTGAGTCGTTGATTGCATTAA 58.891 36.000 0.00 0.00 0.00 1.40
180 181 5.664457 AGATCTGAGTCGTTGATTGCATTA 58.336 37.500 0.00 0.00 0.00 1.90
181 182 4.511527 AGATCTGAGTCGTTGATTGCATT 58.488 39.130 0.00 0.00 0.00 3.56
182 183 4.134379 AGATCTGAGTCGTTGATTGCAT 57.866 40.909 0.00 0.00 0.00 3.96
183 184 3.599730 AGATCTGAGTCGTTGATTGCA 57.400 42.857 0.00 0.00 0.00 4.08
184 185 6.595772 AAATAGATCTGAGTCGTTGATTGC 57.404 37.500 5.18 0.00 0.00 3.56
188 189 9.562408 AGAGTATAAATAGATCTGAGTCGTTGA 57.438 33.333 5.18 0.00 0.00 3.18
189 190 9.820229 GAGAGTATAAATAGATCTGAGTCGTTG 57.180 37.037 5.18 0.00 0.00 4.10
190 191 9.562408 TGAGAGTATAAATAGATCTGAGTCGTT 57.438 33.333 5.18 0.00 0.00 3.85
191 192 8.995220 GTGAGAGTATAAATAGATCTGAGTCGT 58.005 37.037 5.18 0.00 0.00 4.34
192 193 8.447833 GGTGAGAGTATAAATAGATCTGAGTCG 58.552 40.741 5.18 0.00 0.00 4.18
193 194 9.515226 AGGTGAGAGTATAAATAGATCTGAGTC 57.485 37.037 5.18 0.00 0.00 3.36
194 195 9.515226 GAGGTGAGAGTATAAATAGATCTGAGT 57.485 37.037 5.18 0.00 0.00 3.41
195 196 9.739276 AGAGGTGAGAGTATAAATAGATCTGAG 57.261 37.037 5.18 0.00 0.00 3.35
196 197 9.733556 GAGAGGTGAGAGTATAAATAGATCTGA 57.266 37.037 5.18 0.00 0.00 3.27
197 198 9.513906 TGAGAGGTGAGAGTATAAATAGATCTG 57.486 37.037 5.18 0.00 0.00 2.90
198 199 9.515226 GTGAGAGGTGAGAGTATAAATAGATCT 57.485 37.037 0.00 0.00 0.00 2.75
199 200 8.736244 GGTGAGAGGTGAGAGTATAAATAGATC 58.264 40.741 0.00 0.00 0.00 2.75
200 201 8.452868 AGGTGAGAGGTGAGAGTATAAATAGAT 58.547 37.037 0.00 0.00 0.00 1.98
201 202 7.721842 CAGGTGAGAGGTGAGAGTATAAATAGA 59.278 40.741 0.00 0.00 0.00 1.98
202 203 7.504238 ACAGGTGAGAGGTGAGAGTATAAATAG 59.496 40.741 0.00 0.00 0.00 1.73
203 204 7.355101 ACAGGTGAGAGGTGAGAGTATAAATA 58.645 38.462 0.00 0.00 0.00 1.40
204 205 6.198639 ACAGGTGAGAGGTGAGAGTATAAAT 58.801 40.000 0.00 0.00 0.00 1.40
205 206 5.580998 ACAGGTGAGAGGTGAGAGTATAAA 58.419 41.667 0.00 0.00 0.00 1.40
206 207 5.194473 ACAGGTGAGAGGTGAGAGTATAA 57.806 43.478 0.00 0.00 0.00 0.98
207 208 4.864483 ACAGGTGAGAGGTGAGAGTATA 57.136 45.455 0.00 0.00 0.00 1.47
208 209 3.748645 ACAGGTGAGAGGTGAGAGTAT 57.251 47.619 0.00 0.00 0.00 2.12
209 210 3.329814 TGTACAGGTGAGAGGTGAGAGTA 59.670 47.826 0.00 0.00 0.00 2.59
210 211 2.108425 TGTACAGGTGAGAGGTGAGAGT 59.892 50.000 0.00 0.00 0.00 3.24
211 212 2.752354 CTGTACAGGTGAGAGGTGAGAG 59.248 54.545 15.49 0.00 0.00 3.20
212 213 2.108425 ACTGTACAGGTGAGAGGTGAGA 59.892 50.000 26.12 0.00 0.00 3.27
213 214 2.520069 ACTGTACAGGTGAGAGGTGAG 58.480 52.381 26.12 0.00 0.00 3.51
214 215 2.677542 ACTGTACAGGTGAGAGGTGA 57.322 50.000 26.12 0.00 0.00 4.02
223 224 6.620877 TTGATAATCCTCAACTGTACAGGT 57.379 37.500 26.12 18.46 30.34 4.00
224 225 7.607991 AGTTTTGATAATCCTCAACTGTACAGG 59.392 37.037 26.12 9.70 34.96 4.00
225 226 8.446273 CAGTTTTGATAATCCTCAACTGTACAG 58.554 37.037 21.44 21.44 34.96 2.74
226 227 7.094805 GCAGTTTTGATAATCCTCAACTGTACA 60.095 37.037 10.62 0.00 36.79 2.90
227 228 7.094805 TGCAGTTTTGATAATCCTCAACTGTAC 60.095 37.037 10.62 0.00 36.79 2.90
228 229 6.939730 TGCAGTTTTGATAATCCTCAACTGTA 59.060 34.615 10.62 4.53 36.79 2.74
229 230 5.769662 TGCAGTTTTGATAATCCTCAACTGT 59.230 36.000 10.62 0.00 36.79 3.55
230 231 6.072286 AGTGCAGTTTTGATAATCCTCAACTG 60.072 38.462 5.65 5.65 37.19 3.16
231 232 6.006449 AGTGCAGTTTTGATAATCCTCAACT 58.994 36.000 0.00 0.00 34.96 3.16
232 233 6.259550 AGTGCAGTTTTGATAATCCTCAAC 57.740 37.500 0.00 0.00 34.96 3.18
233 234 7.882791 TCTTAGTGCAGTTTTGATAATCCTCAA 59.117 33.333 0.00 0.00 33.42 3.02
234 235 7.394016 TCTTAGTGCAGTTTTGATAATCCTCA 58.606 34.615 0.00 0.00 0.00 3.86
235 236 7.849804 TCTTAGTGCAGTTTTGATAATCCTC 57.150 36.000 0.00 0.00 0.00 3.71
236 237 8.635765 TTTCTTAGTGCAGTTTTGATAATCCT 57.364 30.769 0.00 0.00 0.00 3.24
237 238 9.860898 ATTTTCTTAGTGCAGTTTTGATAATCC 57.139 29.630 0.00 0.00 0.00 3.01
250 251 7.047891 CCATAGGAGTACATTTTCTTAGTGCA 58.952 38.462 0.00 0.00 0.00 4.57
258 260 5.648092 ACAACAGCCATAGGAGTACATTTTC 59.352 40.000 0.00 0.00 0.00 2.29
261 263 4.844349 ACAACAGCCATAGGAGTACATT 57.156 40.909 0.00 0.00 0.00 2.71
286 288 1.298014 CCAACCAGAGAGAGCCACC 59.702 63.158 0.00 0.00 0.00 4.61
414 422 2.280628 GATTGTTCGTCTGGTGGATCC 58.719 52.381 4.20 4.20 0.00 3.36
667 681 9.907229 AAGCTATAGAAACTAGTTGCCTTTTAT 57.093 29.630 9.34 3.80 0.00 1.40
668 682 9.162764 CAAGCTATAGAAACTAGTTGCCTTTTA 57.837 33.333 9.34 0.00 0.00 1.52
780 833 5.421212 AGATCCTTAACGATCGTGTACTC 57.579 43.478 23.51 13.53 42.94 2.59
786 839 8.162878 TGTAAATCTAGATCCTTAACGATCGT 57.837 34.615 16.60 16.60 42.94 3.73
807 860 0.983905 TCCTGGCCGGCCTTATGTAA 60.984 55.000 43.34 22.68 36.94 2.41
834 887 3.166953 ATGTGTGTGTGTGTGCGCG 62.167 57.895 0.00 0.00 0.00 6.86
835 888 1.655046 CATGTGTGTGTGTGTGCGC 60.655 57.895 0.00 0.00 0.00 6.09
836 889 1.655046 GCATGTGTGTGTGTGTGCG 60.655 57.895 0.00 0.00 0.00 5.34
837 890 0.031043 ATGCATGTGTGTGTGTGTGC 59.969 50.000 0.00 0.00 0.00 4.57
838 891 1.334243 TCATGCATGTGTGTGTGTGTG 59.666 47.619 25.43 0.00 0.00 3.82
839 892 1.605232 CTCATGCATGTGTGTGTGTGT 59.395 47.619 25.43 0.00 0.00 3.72
840 893 1.605232 ACTCATGCATGTGTGTGTGTG 59.395 47.619 28.44 6.86 33.71 3.82
841 894 1.605232 CACTCATGCATGTGTGTGTGT 59.395 47.619 36.56 16.33 43.49 3.72
1004 1057 9.166222 TCTCTATGTAGATACCTCTCTTCTCTT 57.834 37.037 0.00 0.00 32.66 2.85
1008 1061 9.436957 CTCTTCTCTATGTAGATACCTCTCTTC 57.563 40.741 0.00 0.00 32.66 2.87
1009 1062 7.883311 GCTCTTCTCTATGTAGATACCTCTCTT 59.117 40.741 0.00 0.00 32.66 2.85
1016 1069 6.312918 CCTCTCGCTCTTCTCTATGTAGATAC 59.687 46.154 0.00 0.00 0.00 2.24
1025 1081 2.104111 CTCTCCCTCTCGCTCTTCTCTA 59.896 54.545 0.00 0.00 0.00 2.43
1038 1094 1.334384 GCCACCTTCCTCTCTCCCTC 61.334 65.000 0.00 0.00 0.00 4.30
1045 1101 2.060980 CGCCTAGCCACCTTCCTCT 61.061 63.158 0.00 0.00 0.00 3.69
1046 1102 2.501610 CGCCTAGCCACCTTCCTC 59.498 66.667 0.00 0.00 0.00 3.71
1667 1735 2.002586 CACGCGATCAGACAGGAAAAT 58.997 47.619 15.93 0.00 0.00 1.82
1698 1766 7.878477 AAAATAAATGTGAGACATGCAACAG 57.122 32.000 0.00 0.00 37.97 3.16
1721 1789 3.117093 TGGGGGTGGATTAACAAGACAAA 60.117 43.478 0.00 0.00 0.00 2.83
1736 1805 1.002659 TCGAATGTACACTTGGGGGTG 59.997 52.381 0.00 0.00 42.34 4.61
1754 1823 0.179275 CACACGCGACACTTGAATCG 60.179 55.000 15.93 0.00 41.32 3.34
1778 1847 1.195448 CACGGTCACAGCATTGTTCTC 59.805 52.381 0.00 0.00 34.62 2.87
1828 1897 3.443329 AGTGTCACAAAGCACAAATCACA 59.557 39.130 5.62 0.00 38.02 3.58
1855 1924 1.546476 ACAAAGCACCCACGTCAAAAA 59.454 42.857 0.00 0.00 0.00 1.94
1856 1925 1.135257 CACAAAGCACCCACGTCAAAA 60.135 47.619 0.00 0.00 0.00 2.44
1857 1926 0.453793 CACAAAGCACCCACGTCAAA 59.546 50.000 0.00 0.00 0.00 2.69
1858 1927 0.393132 TCACAAAGCACCCACGTCAA 60.393 50.000 0.00 0.00 0.00 3.18
1859 1928 1.092921 GTCACAAAGCACCCACGTCA 61.093 55.000 0.00 0.00 0.00 4.35
1860 1929 1.092921 TGTCACAAAGCACCCACGTC 61.093 55.000 0.00 0.00 0.00 4.34
1861 1930 1.078072 TGTCACAAAGCACCCACGT 60.078 52.632 0.00 0.00 0.00 4.49
1862 1931 1.095228 AGTGTCACAAAGCACCCACG 61.095 55.000 5.62 0.00 36.35 4.94
1863 1932 1.065551 GAAGTGTCACAAAGCACCCAC 59.934 52.381 5.62 0.00 36.35 4.61
1864 1933 1.064758 AGAAGTGTCACAAAGCACCCA 60.065 47.619 5.62 0.00 36.35 4.51
1865 1934 1.334869 CAGAAGTGTCACAAAGCACCC 59.665 52.381 5.62 0.00 36.35 4.61
1866 1935 2.017049 ACAGAAGTGTCACAAAGCACC 58.983 47.619 5.62 0.00 36.35 5.01
1867 1936 3.119849 ACAACAGAAGTGTCACAAAGCAC 60.120 43.478 5.62 0.00 35.08 4.40
1868 1937 3.081061 ACAACAGAAGTGTCACAAAGCA 58.919 40.909 5.62 0.00 35.08 3.91
1869 1938 3.764885 ACAACAGAAGTGTCACAAAGC 57.235 42.857 5.62 0.00 35.08 3.51
1870 1939 8.394877 TGTATTTACAACAGAAGTGTCACAAAG 58.605 33.333 5.62 0.00 35.08 2.77
1925 1995 7.758495 AGAACCTATGTTTAAATAAACGGCAG 58.242 34.615 10.51 7.56 46.38 4.85
1934 2004 8.545472 TGTGTAGGCTAGAACCTATGTTTAAAT 58.455 33.333 0.00 0.00 44.08 1.40
1945 3427 2.399580 AGGGATGTGTAGGCTAGAACC 58.600 52.381 0.00 0.00 0.00 3.62
1982 3464 6.696583 TCTTTGTTTTACGAATGAGACACGTA 59.303 34.615 0.00 0.00 40.61 3.57
1984 3466 5.969741 TCTTTGTTTTACGAATGAGACACG 58.030 37.500 0.00 0.00 0.00 4.49
2032 3514 5.713861 ACCAAAACGTAGGTAGTAGATGTCT 59.286 40.000 5.55 0.00 36.07 3.41
2033 3515 5.958955 ACCAAAACGTAGGTAGTAGATGTC 58.041 41.667 5.55 0.00 36.07 3.06
2034 3516 5.990120 ACCAAAACGTAGGTAGTAGATGT 57.010 39.130 5.55 0.00 36.07 3.06
2035 3517 6.309737 GTGAACCAAAACGTAGGTAGTAGATG 59.690 42.308 7.57 0.00 37.07 2.90
2037 3519 5.536161 AGTGAACCAAAACGTAGGTAGTAGA 59.464 40.000 7.57 0.00 37.07 2.59
2038 3520 5.632347 CAGTGAACCAAAACGTAGGTAGTAG 59.368 44.000 7.57 0.00 37.07 2.57
2039 3521 5.509501 CCAGTGAACCAAAACGTAGGTAGTA 60.510 44.000 7.57 0.00 37.07 1.82
2041 3523 3.744426 CCAGTGAACCAAAACGTAGGTAG 59.256 47.826 7.57 0.00 37.07 3.18
2042 3524 3.134442 ACCAGTGAACCAAAACGTAGGTA 59.866 43.478 7.57 0.00 37.07 3.08
2043 3525 2.092807 ACCAGTGAACCAAAACGTAGGT 60.093 45.455 1.76 1.76 40.61 3.08
2044 3526 2.546789 GACCAGTGAACCAAAACGTAGG 59.453 50.000 0.00 0.00 0.00 3.18
2045 3527 3.463944 AGACCAGTGAACCAAAACGTAG 58.536 45.455 0.00 0.00 0.00 3.51
2046 3528 3.133362 AGAGACCAGTGAACCAAAACGTA 59.867 43.478 0.00 0.00 0.00 3.57
2047 3529 2.093128 AGAGACCAGTGAACCAAAACGT 60.093 45.455 0.00 0.00 0.00 3.99
2048 3530 2.544267 GAGAGACCAGTGAACCAAAACG 59.456 50.000 0.00 0.00 0.00 3.60
2049 3531 2.879026 GGAGAGACCAGTGAACCAAAAC 59.121 50.000 0.00 0.00 38.79 2.43
2050 3532 2.777692 AGGAGAGACCAGTGAACCAAAA 59.222 45.455 0.00 0.00 42.04 2.44
2051 3533 2.408565 AGGAGAGACCAGTGAACCAAA 58.591 47.619 0.00 0.00 42.04 3.28
2052 3534 2.103153 AGGAGAGACCAGTGAACCAA 57.897 50.000 0.00 0.00 42.04 3.67
2053 3535 2.110188 AGTAGGAGAGACCAGTGAACCA 59.890 50.000 0.00 0.00 42.04 3.67
2054 3536 2.494073 CAGTAGGAGAGACCAGTGAACC 59.506 54.545 0.00 0.00 42.04 3.62
2055 3537 2.094442 GCAGTAGGAGAGACCAGTGAAC 60.094 54.545 0.00 0.00 42.04 3.18
2056 3538 2.171840 GCAGTAGGAGAGACCAGTGAA 58.828 52.381 0.00 0.00 42.04 3.18
2057 3539 1.617263 GGCAGTAGGAGAGACCAGTGA 60.617 57.143 0.00 0.00 42.04 3.41
2058 3540 0.820871 GGCAGTAGGAGAGACCAGTG 59.179 60.000 0.00 0.00 42.04 3.66
2059 3541 0.681564 CGGCAGTAGGAGAGACCAGT 60.682 60.000 0.00 0.00 42.04 4.00
2060 3542 0.681564 ACGGCAGTAGGAGAGACCAG 60.682 60.000 0.00 0.00 42.04 4.00
2061 3543 0.251653 AACGGCAGTAGGAGAGACCA 60.252 55.000 0.00 0.00 42.04 4.02
2062 3544 0.896226 AAACGGCAGTAGGAGAGACC 59.104 55.000 0.00 0.00 39.35 3.85
2063 3545 4.388378 AATAAACGGCAGTAGGAGAGAC 57.612 45.455 0.00 0.00 0.00 3.36
2064 3546 6.534475 TTAAATAAACGGCAGTAGGAGAGA 57.466 37.500 0.00 0.00 0.00 3.10
2065 3547 6.592607 TGTTTAAATAAACGGCAGTAGGAGAG 59.407 38.462 10.51 0.00 46.38 3.20
2066 3548 6.465948 TGTTTAAATAAACGGCAGTAGGAGA 58.534 36.000 10.51 0.00 46.38 3.71
2067 3549 6.730960 TGTTTAAATAAACGGCAGTAGGAG 57.269 37.500 10.51 0.00 46.38 3.69
2068 3550 8.832521 CATATGTTTAAATAAACGGCAGTAGGA 58.167 33.333 10.51 0.00 46.38 2.94
2069 3551 8.617809 ACATATGTTTAAATAAACGGCAGTAGG 58.382 33.333 1.41 4.52 46.38 3.18
2070 3552 9.997482 AACATATGTTTAAATAAACGGCAGTAG 57.003 29.630 15.47 1.78 46.38 2.57
2071 3553 9.991388 GAACATATGTTTAAATAAACGGCAGTA 57.009 29.630 21.63 1.58 46.38 2.74
2072 3554 8.736244 AGAACATATGTTTAAATAAACGGCAGT 58.264 29.630 21.63 0.00 46.38 4.40
2075 3557 9.166126 GCTAGAACATATGTTTAAATAAACGGC 57.834 33.333 21.63 11.78 46.38 5.68
2076 3558 9.659830 GGCTAGAACATATGTTTAAATAAACGG 57.340 33.333 21.63 6.85 46.38 4.44
2086 3568 8.322091 GGGATGTATAGGCTAGAACATATGTTT 58.678 37.037 21.63 13.71 38.56 2.83
2087 3569 7.680310 AGGGATGTATAGGCTAGAACATATGTT 59.320 37.037 20.93 20.93 41.64 2.71
2088 3570 7.192628 AGGGATGTATAGGCTAGAACATATGT 58.807 38.462 19.56 1.41 32.87 2.29
2089 3571 7.667575 AGGGATGTATAGGCTAGAACATATG 57.332 40.000 19.56 0.00 32.87 1.78
2090 3572 8.344546 TGTAGGGATGTATAGGCTAGAACATAT 58.655 37.037 19.56 13.41 32.87 1.78
2091 3573 7.705700 TGTAGGGATGTATAGGCTAGAACATA 58.294 38.462 19.56 6.94 32.87 2.29
2092 3574 6.562228 TGTAGGGATGTATAGGCTAGAACAT 58.438 40.000 19.60 19.60 35.34 2.71
2093 3575 5.960704 TGTAGGGATGTATAGGCTAGAACA 58.039 41.667 13.09 13.09 0.00 3.18
2094 3576 8.770010 ATATGTAGGGATGTATAGGCTAGAAC 57.230 38.462 0.00 1.62 0.00 3.01
2095 3577 9.784376 AAATATGTAGGGATGTATAGGCTAGAA 57.216 33.333 0.00 0.00 0.00 2.10
2096 3578 9.784376 AAAATATGTAGGGATGTATAGGCTAGA 57.216 33.333 0.00 0.00 0.00 2.43
2100 3582 9.614792 CCTTAAAATATGTAGGGATGTATAGGC 57.385 37.037 0.00 0.00 0.00 3.93
2124 3606 9.733556 TGTTTTACAAATGAGACATGTATACCT 57.266 29.630 0.00 0.00 30.29 3.08
2151 3633 8.857216 CGACTACGTCACTTGTATTTTATTCTT 58.143 33.333 0.00 0.00 32.09 2.52
2152 3634 8.390854 CGACTACGTCACTTGTATTTTATTCT 57.609 34.615 0.00 0.00 32.09 2.40
2170 3652 6.090628 GGAGGTAATAGATGTCTACGACTACG 59.909 46.154 0.00 0.00 45.75 3.51
2171 3653 6.933521 TGGAGGTAATAGATGTCTACGACTAC 59.066 42.308 0.00 0.00 33.15 2.73
2172 3654 7.071069 TGGAGGTAATAGATGTCTACGACTA 57.929 40.000 0.00 0.00 33.15 2.59
2173 3655 5.938279 TGGAGGTAATAGATGTCTACGACT 58.062 41.667 0.00 0.00 33.15 4.18
2174 3656 6.821031 ATGGAGGTAATAGATGTCTACGAC 57.179 41.667 0.00 0.00 0.00 4.34
2175 3657 7.175119 CAGAATGGAGGTAATAGATGTCTACGA 59.825 40.741 0.00 0.00 0.00 3.43
2176 3658 7.309177 CAGAATGGAGGTAATAGATGTCTACG 58.691 42.308 0.00 0.00 0.00 3.51
2195 3677 4.223923 AGGAGAGACCAGTAAACCAGAATG 59.776 45.833 0.00 0.00 42.04 2.67
2196 3678 4.430441 AGGAGAGACCAGTAAACCAGAAT 58.570 43.478 0.00 0.00 42.04 2.40
2197 3679 3.858135 AGGAGAGACCAGTAAACCAGAA 58.142 45.455 0.00 0.00 42.04 3.02
2198 3680 3.544698 AGGAGAGACCAGTAAACCAGA 57.455 47.619 0.00 0.00 42.04 3.86
2199 3681 4.158764 CAGTAGGAGAGACCAGTAAACCAG 59.841 50.000 0.00 0.00 42.04 4.00
2200 3682 4.087182 CAGTAGGAGAGACCAGTAAACCA 58.913 47.826 0.00 0.00 42.04 3.67
2201 3683 3.119065 GCAGTAGGAGAGACCAGTAAACC 60.119 52.174 0.00 0.00 42.04 3.27
2202 3684 3.119065 GGCAGTAGGAGAGACCAGTAAAC 60.119 52.174 0.00 0.00 42.04 2.01
2203 3685 3.097614 GGCAGTAGGAGAGACCAGTAAA 58.902 50.000 0.00 0.00 42.04 2.01
2204 3686 2.736347 GGCAGTAGGAGAGACCAGTAA 58.264 52.381 0.00 0.00 42.04 2.24
2205 3687 1.408405 CGGCAGTAGGAGAGACCAGTA 60.408 57.143 0.00 0.00 42.04 2.74
2206 3688 0.681564 CGGCAGTAGGAGAGACCAGT 60.682 60.000 0.00 0.00 42.04 4.00
2207 3689 0.681564 ACGGCAGTAGGAGAGACCAG 60.682 60.000 0.00 0.00 42.04 4.00
2208 3690 0.251653 AACGGCAGTAGGAGAGACCA 60.252 55.000 0.00 0.00 42.04 4.02
2209 3691 0.896226 AAACGGCAGTAGGAGAGACC 59.104 55.000 0.00 0.00 39.35 3.85
2210 3692 4.388378 AATAAACGGCAGTAGGAGAGAC 57.612 45.455 0.00 0.00 0.00 3.36
2211 3693 6.534475 TTAAATAAACGGCAGTAGGAGAGA 57.466 37.500 0.00 0.00 0.00 3.10
2212 3694 6.592607 TGTTTAAATAAACGGCAGTAGGAGAG 59.407 38.462 10.51 0.00 46.38 3.20
2213 3695 6.465948 TGTTTAAATAAACGGCAGTAGGAGA 58.534 36.000 10.51 0.00 46.38 3.71
2214 3696 6.730960 TGTTTAAATAAACGGCAGTAGGAG 57.269 37.500 10.51 0.00 46.38 3.69
2215 3697 7.010367 CGTATGTTTAAATAAACGGCAGTAGGA 59.990 37.037 10.51 0.00 46.38 2.94
2216 3698 7.121272 CGTATGTTTAAATAAACGGCAGTAGG 58.879 38.462 10.51 2.96 46.38 3.18
2217 3699 6.626095 GCGTATGTTTAAATAAACGGCAGTAG 59.374 38.462 16.02 1.88 46.38 2.57
2218 3700 6.313411 AGCGTATGTTTAAATAAACGGCAGTA 59.687 34.615 16.02 0.00 46.38 2.74
2219 3701 5.122711 AGCGTATGTTTAAATAAACGGCAGT 59.877 36.000 16.02 0.00 46.38 4.40
2220 3702 5.565695 AGCGTATGTTTAAATAAACGGCAG 58.434 37.500 16.02 4.96 46.38 4.85
2221 3703 5.548706 AGCGTATGTTTAAATAAACGGCA 57.451 34.783 16.02 0.00 46.38 5.69
2222 3704 6.022821 TGAAGCGTATGTTTAAATAAACGGC 58.977 36.000 16.02 10.52 46.38 5.68
2223 3705 6.193959 GCTGAAGCGTATGTTTAAATAAACGG 59.806 38.462 16.02 3.04 46.38 4.44
2224 3706 6.193959 GGCTGAAGCGTATGTTTAAATAAACG 59.806 38.462 10.51 12.20 43.93 3.60
2225 3707 7.248437 AGGCTGAAGCGTATGTTTAAATAAAC 58.752 34.615 8.72 8.72 42.69 2.01
2226 3708 7.385778 AGGCTGAAGCGTATGTTTAAATAAA 57.614 32.000 0.00 0.00 43.26 1.40
2227 3709 6.995511 AGGCTGAAGCGTATGTTTAAATAA 57.004 33.333 0.00 0.00 43.26 1.40
2228 3710 7.010738 GTGTAGGCTGAAGCGTATGTTTAAATA 59.989 37.037 7.87 0.00 42.35 1.40
2229 3711 5.878116 TGTAGGCTGAAGCGTATGTTTAAAT 59.122 36.000 7.87 0.00 42.35 1.40
2230 3712 5.121142 GTGTAGGCTGAAGCGTATGTTTAAA 59.879 40.000 7.87 0.00 42.35 1.52
2231 3713 4.628333 GTGTAGGCTGAAGCGTATGTTTAA 59.372 41.667 7.87 0.00 42.35 1.52
2232 3714 4.178540 GTGTAGGCTGAAGCGTATGTTTA 58.821 43.478 7.87 0.00 42.35 2.01
2233 3715 3.000727 GTGTAGGCTGAAGCGTATGTTT 58.999 45.455 7.87 0.00 42.35 2.83
2234 3716 2.028476 TGTGTAGGCTGAAGCGTATGTT 60.028 45.455 7.87 0.00 42.35 2.71
2235 3717 1.548719 TGTGTAGGCTGAAGCGTATGT 59.451 47.619 7.87 0.00 42.35 2.29
2236 3718 2.293677 TGTGTAGGCTGAAGCGTATG 57.706 50.000 7.87 0.00 42.35 2.39
2237 3719 2.224066 GGATGTGTAGGCTGAAGCGTAT 60.224 50.000 7.87 0.00 42.35 3.06
2238 3720 1.136305 GGATGTGTAGGCTGAAGCGTA 59.864 52.381 0.00 0.73 43.26 4.42
2239 3721 0.108138 GGATGTGTAGGCTGAAGCGT 60.108 55.000 0.00 2.75 43.26 5.07
2240 3722 0.811616 GGGATGTGTAGGCTGAAGCG 60.812 60.000 0.00 0.00 43.26 4.68
2241 3723 0.543749 AGGGATGTGTAGGCTGAAGC 59.456 55.000 0.00 0.00 41.14 3.86
2242 3724 2.766263 TGTAGGGATGTGTAGGCTGAAG 59.234 50.000 0.00 0.00 0.00 3.02
2243 3725 2.827755 TGTAGGGATGTGTAGGCTGAA 58.172 47.619 0.00 0.00 0.00 3.02
2244 3726 2.543037 TGTAGGGATGTGTAGGCTGA 57.457 50.000 0.00 0.00 0.00 4.26
2245 3727 5.489792 AATATGTAGGGATGTGTAGGCTG 57.510 43.478 0.00 0.00 0.00 4.85
2246 3728 6.515512 AAAATATGTAGGGATGTGTAGGCT 57.484 37.500 0.00 0.00 0.00 4.58
2247 3729 7.390718 CCTTAAAATATGTAGGGATGTGTAGGC 59.609 40.741 0.00 0.00 0.00 3.93
2248 3730 8.437575 ACCTTAAAATATGTAGGGATGTGTAGG 58.562 37.037 0.00 0.00 31.91 3.18
2256 3738 9.985730 CACGTATTACCTTAAAATATGTAGGGA 57.014 33.333 0.00 0.00 37.07 4.20
2257 3739 9.768662 ACACGTATTACCTTAAAATATGTAGGG 57.231 33.333 0.00 0.00 37.07 3.53
2266 3748 9.275398 ACAAATGAGACACGTATTACCTTAAAA 57.725 29.630 0.00 0.00 0.00 1.52
2267 3749 8.836268 ACAAATGAGACACGTATTACCTTAAA 57.164 30.769 0.00 0.00 0.00 1.52
2268 3750 9.926158 TTACAAATGAGACACGTATTACCTTAA 57.074 29.630 0.00 0.00 0.00 1.85
2269 3751 9.926158 TTTACAAATGAGACACGTATTACCTTA 57.074 29.630 0.00 0.00 0.00 2.69
2270 3752 8.836268 TTTACAAATGAGACACGTATTACCTT 57.164 30.769 0.00 0.00 0.00 3.50
2271 3753 8.715088 GTTTTACAAATGAGACACGTATTACCT 58.285 33.333 0.00 0.00 0.00 3.08
2272 3754 8.497554 TGTTTTACAAATGAGACACGTATTACC 58.502 33.333 0.00 0.00 0.00 2.85
2273 3755 9.866936 TTGTTTTACAAATGAGACACGTATTAC 57.133 29.630 0.00 0.00 34.76 1.89
2275 3757 9.445786 CTTTGTTTTACAAATGAGACACGTATT 57.554 29.630 5.54 0.00 45.79 1.89
2276 3758 8.832521 TCTTTGTTTTACAAATGAGACACGTAT 58.167 29.630 5.54 0.00 45.79 3.06
2277 3759 8.199176 TCTTTGTTTTACAAATGAGACACGTA 57.801 30.769 5.54 0.00 45.79 3.57
2278 3760 7.079182 TCTTTGTTTTACAAATGAGACACGT 57.921 32.000 5.54 0.00 45.79 4.49
2279 3761 7.962934 TTCTTTGTTTTACAAATGAGACACG 57.037 32.000 5.54 0.00 45.79 4.49
2294 3776 8.964150 GCGTCACTTGTATTTTATTCTTTGTTT 58.036 29.630 0.00 0.00 0.00 2.83
2295 3777 8.132362 TGCGTCACTTGTATTTTATTCTTTGTT 58.868 29.630 0.00 0.00 0.00 2.83
2296 3778 7.644490 TGCGTCACTTGTATTTTATTCTTTGT 58.356 30.769 0.00 0.00 0.00 2.83
2297 3779 7.201266 GCTGCGTCACTTGTATTTTATTCTTTG 60.201 37.037 0.00 0.00 0.00 2.77
2298 3780 6.801862 GCTGCGTCACTTGTATTTTATTCTTT 59.198 34.615 0.00 0.00 0.00 2.52
2299 3781 6.072728 TGCTGCGTCACTTGTATTTTATTCTT 60.073 34.615 0.00 0.00 0.00 2.52
2300 3782 5.411361 TGCTGCGTCACTTGTATTTTATTCT 59.589 36.000 0.00 0.00 0.00 2.40
2301 3783 5.627172 TGCTGCGTCACTTGTATTTTATTC 58.373 37.500 0.00 0.00 0.00 1.75
2302 3784 5.181245 ACTGCTGCGTCACTTGTATTTTATT 59.819 36.000 0.00 0.00 0.00 1.40
2303 3785 4.695455 ACTGCTGCGTCACTTGTATTTTAT 59.305 37.500 0.00 0.00 0.00 1.40
2304 3786 4.062293 ACTGCTGCGTCACTTGTATTTTA 58.938 39.130 0.00 0.00 0.00 1.52
2305 3787 2.878406 ACTGCTGCGTCACTTGTATTTT 59.122 40.909 0.00 0.00 0.00 1.82
2306 3788 2.494059 ACTGCTGCGTCACTTGTATTT 58.506 42.857 0.00 0.00 0.00 1.40
2307 3789 2.169832 ACTGCTGCGTCACTTGTATT 57.830 45.000 0.00 0.00 0.00 1.89
2308 3790 2.492088 TCTACTGCTGCGTCACTTGTAT 59.508 45.455 0.00 0.00 0.00 2.29
2309 3791 1.883926 TCTACTGCTGCGTCACTTGTA 59.116 47.619 0.00 0.00 0.00 2.41
2310 3792 0.673985 TCTACTGCTGCGTCACTTGT 59.326 50.000 0.00 0.00 0.00 3.16
2311 3793 1.063806 GTCTACTGCTGCGTCACTTG 58.936 55.000 0.00 0.00 0.00 3.16
2312 3794 0.673985 TGTCTACTGCTGCGTCACTT 59.326 50.000 0.00 0.00 0.00 3.16
2313 3795 0.891373 ATGTCTACTGCTGCGTCACT 59.109 50.000 0.00 0.00 0.00 3.41
2314 3796 1.135257 AGATGTCTACTGCTGCGTCAC 60.135 52.381 0.00 0.00 0.00 3.67
2315 3797 1.177401 AGATGTCTACTGCTGCGTCA 58.823 50.000 0.00 0.00 0.00 4.35
2316 3798 2.722071 GTAGATGTCTACTGCTGCGTC 58.278 52.381 11.90 0.00 44.06 5.19
2317 3799 2.853731 GTAGATGTCTACTGCTGCGT 57.146 50.000 11.90 0.00 44.06 5.24
2325 3807 2.291190 GACGGAGGCAGTAGATGTCTAC 59.709 54.545 11.35 11.35 46.38 2.59
2326 3808 2.172930 AGACGGAGGCAGTAGATGTCTA 59.827 50.000 0.00 0.00 46.38 2.59
2328 3810 1.394618 AGACGGAGGCAGTAGATGTC 58.605 55.000 0.00 0.00 0.00 3.06
2329 3811 1.478510 CAAGACGGAGGCAGTAGATGT 59.521 52.381 0.00 0.00 0.00 3.06
2330 3812 1.202463 CCAAGACGGAGGCAGTAGATG 60.202 57.143 0.00 0.00 36.56 2.90
2331 3813 1.115467 CCAAGACGGAGGCAGTAGAT 58.885 55.000 0.00 0.00 36.56 1.98
2332 3814 0.251653 ACCAAGACGGAGGCAGTAGA 60.252 55.000 0.00 0.00 38.63 2.59
2333 3815 0.608640 AACCAAGACGGAGGCAGTAG 59.391 55.000 0.00 0.00 38.63 2.57
2334 3816 1.053424 AAACCAAGACGGAGGCAGTA 58.947 50.000 0.00 0.00 38.63 2.74
2335 3817 1.053424 TAAACCAAGACGGAGGCAGT 58.947 50.000 0.00 0.00 38.63 4.40
2336 3818 2.403252 ATAAACCAAGACGGAGGCAG 57.597 50.000 0.00 0.00 38.63 4.85
2337 3819 2.871096 AATAAACCAAGACGGAGGCA 57.129 45.000 0.00 0.00 38.63 4.75
2338 3820 3.870274 ACTAATAAACCAAGACGGAGGC 58.130 45.455 0.00 0.00 38.63 4.70
2339 3821 5.969423 TGTACTAATAAACCAAGACGGAGG 58.031 41.667 0.00 0.00 38.63 4.30
2340 3822 7.262772 TCATGTACTAATAAACCAAGACGGAG 58.737 38.462 0.00 0.00 38.63 4.63
2341 3823 7.123098 TCTCATGTACTAATAAACCAAGACGGA 59.877 37.037 0.00 0.00 38.63 4.69
2342 3824 7.262772 TCTCATGTACTAATAAACCAAGACGG 58.737 38.462 0.00 0.00 42.50 4.79
2343 3825 8.697846 TTCTCATGTACTAATAAACCAAGACG 57.302 34.615 0.00 0.00 0.00 4.18
2380 3862 5.252547 TGGCTCATTGCTTATGTTCTGTTA 58.747 37.500 0.00 0.00 42.39 2.41
2390 3872 2.825532 GGGTCTTTTGGCTCATTGCTTA 59.174 45.455 0.00 0.00 42.39 3.09
2399 3881 1.872773 TTGGTTTGGGTCTTTTGGCT 58.127 45.000 0.00 0.00 0.00 4.75
2431 3913 1.533625 TTTCGATGGAACCAGCTTGG 58.466 50.000 7.48 1.16 45.02 3.61
2432 3914 3.689161 TGTATTTCGATGGAACCAGCTTG 59.311 43.478 7.48 0.00 0.00 4.01
2433 3915 3.689649 GTGTATTTCGATGGAACCAGCTT 59.310 43.478 7.48 0.00 0.00 3.74
2445 4045 1.074084 TGGGGCCTTTGTGTATTTCGA 59.926 47.619 0.84 0.00 0.00 3.71
2591 4191 3.432252 CAGAAAGCGACCGTAGATGTTTT 59.568 43.478 0.00 0.00 0.00 2.43
2606 4206 1.615392 ACCCTTGCAATCACAGAAAGC 59.385 47.619 0.00 0.00 0.00 3.51
2690 4291 3.072184 CCCCTCTATTCCTTGGATGACAG 59.928 52.174 0.00 0.00 0.00 3.51
2691 4292 3.048600 CCCCTCTATTCCTTGGATGACA 58.951 50.000 0.00 0.00 0.00 3.58
2692 4293 2.373502 CCCCCTCTATTCCTTGGATGAC 59.626 54.545 0.00 0.00 0.00 3.06
2693 4294 2.706350 CCCCCTCTATTCCTTGGATGA 58.294 52.381 0.00 0.00 0.00 2.92
2714 4315 3.321111 TCGTAAAGCCTATGGATGAGGTC 59.679 47.826 0.00 0.00 36.37 3.85
2715 4316 3.305720 TCGTAAAGCCTATGGATGAGGT 58.694 45.455 0.00 0.00 36.37 3.85
2716 4317 3.862642 GCTCGTAAAGCCTATGGATGAGG 60.863 52.174 0.00 0.00 45.92 3.86
2717 4318 3.321497 GCTCGTAAAGCCTATGGATGAG 58.679 50.000 0.00 0.00 45.92 2.90
2718 4319 3.386768 GCTCGTAAAGCCTATGGATGA 57.613 47.619 0.00 0.00 45.92 2.92
2738 4339 1.063567 AGAGGTGGGTGGCTACTAGAG 60.064 57.143 0.00 0.00 0.00 2.43
2739 4340 1.008403 AGAGGTGGGTGGCTACTAGA 58.992 55.000 0.00 0.00 0.00 2.43
2740 4341 2.750141 TAGAGGTGGGTGGCTACTAG 57.250 55.000 0.00 0.00 0.00 2.57
2741 4342 3.478175 TTTAGAGGTGGGTGGCTACTA 57.522 47.619 0.00 0.00 0.00 1.82
2742 4343 2.337359 TTTAGAGGTGGGTGGCTACT 57.663 50.000 0.00 0.00 0.00 2.57
2743 4344 3.492137 CGTATTTAGAGGTGGGTGGCTAC 60.492 52.174 0.00 0.00 0.00 3.58
2744 4345 2.696707 CGTATTTAGAGGTGGGTGGCTA 59.303 50.000 0.00 0.00 0.00 3.93
2745 4346 1.485066 CGTATTTAGAGGTGGGTGGCT 59.515 52.381 0.00 0.00 0.00 4.75
2746 4347 1.474498 CCGTATTTAGAGGTGGGTGGC 60.474 57.143 0.00 0.00 0.00 5.01
2747 4348 1.140252 CCCGTATTTAGAGGTGGGTGG 59.860 57.143 0.00 0.00 31.82 4.61
2748 4349 2.112998 TCCCGTATTTAGAGGTGGGTG 58.887 52.381 0.00 0.00 37.88 4.61
2749 4350 2.555732 TCCCGTATTTAGAGGTGGGT 57.444 50.000 0.00 0.00 37.88 4.51
2750 4351 2.550208 GCATCCCGTATTTAGAGGTGGG 60.550 54.545 0.00 0.00 38.02 4.61
2751 4352 2.104111 TGCATCCCGTATTTAGAGGTGG 59.896 50.000 0.00 0.00 0.00 4.61
2752 4353 3.469008 TGCATCCCGTATTTAGAGGTG 57.531 47.619 0.00 0.00 0.00 4.00
2753 4354 3.454812 ACTTGCATCCCGTATTTAGAGGT 59.545 43.478 0.00 0.00 0.00 3.85
2754 4355 4.058817 GACTTGCATCCCGTATTTAGAGG 58.941 47.826 0.00 0.00 0.00 3.69
2755 4356 4.693283 TGACTTGCATCCCGTATTTAGAG 58.307 43.478 0.00 0.00 0.00 2.43
2756 4357 4.746535 TGACTTGCATCCCGTATTTAGA 57.253 40.909 0.00 0.00 0.00 2.10
2757 4358 5.597813 GATGACTTGCATCCCGTATTTAG 57.402 43.478 0.00 0.00 46.23 1.85
2797 4597 2.210116 CACATAAGTATGGGGCGTGTC 58.790 52.381 3.48 0.00 38.00 3.67
2848 4648 2.039480 GCATATCTGGGCATCTTCCTCA 59.961 50.000 0.00 0.00 0.00 3.86
2926 4726 5.395682 TCAGTTATGTTTAGTGGTAGCGT 57.604 39.130 0.00 0.00 0.00 5.07
2965 4765 8.367660 AGATCTAATGAGTTGTTTAGGAGTCA 57.632 34.615 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.