Multiple sequence alignment - TraesCS3B01G109800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G109800 chr3B 100.000 2947 0 0 1 2947 75734554 75737500 0.000000e+00 5443.0
1 TraesCS3B01G109800 chr3A 89.069 2781 189 47 2 2736 60296494 60299205 0.000000e+00 3345.0
2 TraesCS3B01G109800 chr3D 89.213 1474 102 26 1310 2737 48071033 48072495 0.000000e+00 1788.0
3 TraesCS3B01G109800 chr3D 87.964 1321 76 40 1 1292 48069634 48070900 0.000000e+00 1482.0
4 TraesCS3B01G109800 chr2B 87.952 83 10 0 1377 1459 550213837 550213755 6.720000e-17 99.0
5 TraesCS3B01G109800 chr6D 86.747 83 11 0 1377 1459 309719548 309719630 3.130000e-15 93.5
6 TraesCS3B01G109800 chr6D 100.000 29 0 0 1062 1090 309341541 309341569 1.000000e-03 54.7
7 TraesCS3B01G109800 chr6B 86.747 83 11 0 1377 1459 477691822 477691904 3.130000e-15 93.5
8 TraesCS3B01G109800 chr6B 100.000 29 0 0 1062 1090 476841206 476841234 1.000000e-03 54.7
9 TraesCS3B01G109800 chr6A 86.747 83 11 0 1377 1459 446521693 446521775 3.130000e-15 93.5
10 TraesCS3B01G109800 chr6A 100.000 28 0 0 1062 1089 446091951 446091978 5.000000e-03 52.8
11 TraesCS3B01G109800 chr5D 75.410 244 32 23 1062 1291 130188037 130188266 3.130000e-15 93.5
12 TraesCS3B01G109800 chr5B 87.654 81 8 2 1377 1456 514279241 514279162 3.130000e-15 93.5
13 TraesCS3B01G109800 chr2D 86.747 83 11 0 1377 1459 471055606 471055524 3.130000e-15 93.5
14 TraesCS3B01G109800 chr2A 86.747 83 11 0 1377 1459 612834668 612834586 3.130000e-15 93.5
15 TraesCS3B01G109800 chr2A 96.875 32 1 0 1062 1093 613175733 613175702 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G109800 chr3B 75734554 75737500 2946 False 5443 5443 100.0000 1 2947 1 chr3B.!!$F1 2946
1 TraesCS3B01G109800 chr3A 60296494 60299205 2711 False 3345 3345 89.0690 2 2736 1 chr3A.!!$F1 2734
2 TraesCS3B01G109800 chr3D 48069634 48072495 2861 False 1635 1788 88.5885 1 2737 2 chr3D.!!$F1 2736

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
756 767 0.044092 TGGATGCCTCCACCCTAAGA 59.956 55.0 6.63 0.0 46.95 2.1 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2593 2784 0.537371 CCAAAGCACCCCGAGTCTTT 60.537 55.0 0.0 0.0 0.0 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.346476 CTTCACTCAAATCGAAAGGTAGATAG 57.654 38.462 0.00 0.00 0.00 2.08
27 28 6.096987 TCACTCAAATCGAAAGGTAGATAGCT 59.903 38.462 0.00 0.00 35.17 3.32
38 39 7.494625 CGAAAGGTAGATAGCTCAAATTAACCA 59.505 37.037 0.00 0.00 32.81 3.67
39 40 9.343539 GAAAGGTAGATAGCTCAAATTAACCAT 57.656 33.333 0.00 0.00 32.81 3.55
40 41 8.910351 AAGGTAGATAGCTCAAATTAACCATC 57.090 34.615 0.00 0.00 32.81 3.51
41 42 7.155328 AGGTAGATAGCTCAAATTAACCATCG 58.845 38.462 0.00 0.00 0.00 3.84
53 54 5.614324 ATTAACCATCGATCACTCTCCAA 57.386 39.130 0.00 0.00 0.00 3.53
72 73 4.707448 TCCAACTTAAGCTTTTCAACCACA 59.293 37.500 3.20 0.00 0.00 4.17
79 80 8.421002 ACTTAAGCTTTTCAACCACAAACATAT 58.579 29.630 3.20 0.00 0.00 1.78
80 81 9.906660 CTTAAGCTTTTCAACCACAAACATATA 57.093 29.630 3.20 0.00 0.00 0.86
82 83 8.587952 AAGCTTTTCAACCACAAACATATAAC 57.412 30.769 0.00 0.00 0.00 1.89
83 84 6.861055 AGCTTTTCAACCACAAACATATAACG 59.139 34.615 0.00 0.00 0.00 3.18
84 85 6.858993 GCTTTTCAACCACAAACATATAACGA 59.141 34.615 0.00 0.00 0.00 3.85
85 86 7.540745 GCTTTTCAACCACAAACATATAACGAT 59.459 33.333 0.00 0.00 0.00 3.73
86 87 9.405587 CTTTTCAACCACAAACATATAACGATT 57.594 29.630 0.00 0.00 0.00 3.34
87 88 8.735303 TTTCAACCACAAACATATAACGATTG 57.265 30.769 0.00 0.00 0.00 2.67
88 89 7.674471 TCAACCACAAACATATAACGATTGA 57.326 32.000 0.00 0.00 0.00 2.57
89 90 8.100508 TCAACCACAAACATATAACGATTGAA 57.899 30.769 0.00 0.00 0.00 2.69
90 91 8.233868 TCAACCACAAACATATAACGATTGAAG 58.766 33.333 0.00 0.00 0.00 3.02
91 92 6.551736 ACCACAAACATATAACGATTGAAGC 58.448 36.000 0.00 0.00 0.00 3.86
92 93 6.150307 ACCACAAACATATAACGATTGAAGCA 59.850 34.615 0.00 0.00 0.00 3.91
99 100 0.235665 AACGATTGAAGCAGCACGTG 59.764 50.000 12.28 12.28 34.36 4.49
134 135 9.787435 TTCACTTGTGTTTAATTACATACTCCT 57.213 29.630 0.46 0.00 0.00 3.69
137 138 8.999431 ACTTGTGTTTAATTACATACTCCTGTG 58.001 33.333 1.04 0.00 0.00 3.66
144 145 8.786826 TTAATTACATACTCCTGTGGAAAGTG 57.213 34.615 0.00 0.00 0.00 3.16
146 147 2.979678 ACATACTCCTGTGGAAAGTGGT 59.020 45.455 0.00 0.00 0.00 4.16
149 150 3.487120 ACTCCTGTGGAAAGTGGTTAC 57.513 47.619 0.00 0.00 0.00 2.50
153 154 0.180642 TGTGGAAAGTGGTTACGGCA 59.819 50.000 0.00 0.00 0.00 5.69
173 174 4.687483 GGCATGACTTGACCAAAATCTTTG 59.313 41.667 0.00 0.00 0.00 2.77
174 175 4.151157 GCATGACTTGACCAAAATCTTTGC 59.849 41.667 0.00 0.00 0.00 3.68
175 176 5.535333 CATGACTTGACCAAAATCTTTGCT 58.465 37.500 0.00 0.00 0.00 3.91
176 177 5.186996 TGACTTGACCAAAATCTTTGCTC 57.813 39.130 0.00 0.00 0.00 4.26
177 178 4.889409 TGACTTGACCAAAATCTTTGCTCT 59.111 37.500 0.00 0.00 0.00 4.09
180 181 7.068103 TGACTTGACCAAAATCTTTGCTCTTTA 59.932 33.333 0.00 0.00 0.00 1.85
181 182 7.781056 ACTTGACCAAAATCTTTGCTCTTTAA 58.219 30.769 0.00 0.00 0.00 1.52
182 183 8.424133 ACTTGACCAAAATCTTTGCTCTTTAAT 58.576 29.630 0.00 0.00 0.00 1.40
293 296 4.337555 GCAATTGTCTCTCATTGGCTGTAT 59.662 41.667 7.40 0.00 0.00 2.29
343 346 5.510861 GGAATACTACGATGGCATAGTTGGT 60.511 44.000 18.31 17.74 33.65 3.67
437 443 6.377327 TCAAAAGGAGTAGCTGACAAAAAG 57.623 37.500 0.00 0.00 0.00 2.27
438 444 5.885912 TCAAAAGGAGTAGCTGACAAAAAGT 59.114 36.000 0.00 0.00 0.00 2.66
439 445 6.377146 TCAAAAGGAGTAGCTGACAAAAAGTT 59.623 34.615 0.00 0.00 0.00 2.66
440 446 7.554835 TCAAAAGGAGTAGCTGACAAAAAGTTA 59.445 33.333 0.00 0.00 0.00 2.24
441 447 6.862711 AAGGAGTAGCTGACAAAAAGTTAC 57.137 37.500 0.00 0.00 33.08 2.50
476 482 6.564709 GCATGGATTCATATGCTCACTTAA 57.435 37.500 14.36 0.00 44.70 1.85
477 483 7.154435 GCATGGATTCATATGCTCACTTAAT 57.846 36.000 14.36 0.00 44.70 1.40
478 484 7.600065 GCATGGATTCATATGCTCACTTAATT 58.400 34.615 14.36 0.00 44.70 1.40
479 485 8.733458 GCATGGATTCATATGCTCACTTAATTA 58.267 33.333 14.36 0.00 44.70 1.40
520 529 6.005066 TGTGACTATGATCATCCATTGGTT 57.995 37.500 12.53 0.00 0.00 3.67
521 530 7.135591 TGTGACTATGATCATCCATTGGTTA 57.864 36.000 12.53 0.00 0.00 2.85
522 531 6.992123 TGTGACTATGATCATCCATTGGTTAC 59.008 38.462 12.53 4.71 0.00 2.50
523 532 6.146184 GTGACTATGATCATCCATTGGTTACG 59.854 42.308 12.53 0.00 0.00 3.18
524 533 6.174720 ACTATGATCATCCATTGGTTACGT 57.825 37.500 12.53 0.00 0.00 3.57
525 534 6.591935 ACTATGATCATCCATTGGTTACGTT 58.408 36.000 12.53 0.00 0.00 3.99
526 535 7.732025 ACTATGATCATCCATTGGTTACGTTA 58.268 34.615 12.53 0.00 0.00 3.18
527 536 8.375506 ACTATGATCATCCATTGGTTACGTTAT 58.624 33.333 12.53 0.00 0.00 1.89
528 537 9.869757 CTATGATCATCCATTGGTTACGTTATA 57.130 33.333 12.53 0.00 0.00 0.98
569 578 2.431057 CGGGTAGGAAGCTAGTCATTGT 59.569 50.000 0.00 0.00 0.00 2.71
572 581 4.113354 GGTAGGAAGCTAGTCATTGTTCG 58.887 47.826 0.00 0.00 0.00 3.95
696 706 9.794685 CATGATGGAGATACACATATAGTACAC 57.205 37.037 0.00 0.00 0.00 2.90
756 767 0.044092 TGGATGCCTCCACCCTAAGA 59.956 55.000 6.63 0.00 46.95 2.10
764 775 4.043561 TGCCTCCACCCTAAGATACAAAAA 59.956 41.667 0.00 0.00 0.00 1.94
1119 1149 2.692368 ACCCGGATCACCAGGCAT 60.692 61.111 0.73 0.00 37.24 4.40
1311 1456 7.550906 AGGTACTGCATTCTAGATTTCTTGTTC 59.449 37.037 0.00 0.00 37.18 3.18
1324 1469 8.955061 AGATTTCTTGTTCGTAATTGATTGTG 57.045 30.769 0.00 0.00 0.00 3.33
1340 1488 1.832883 TGTGGAACATTTGGGATCGG 58.167 50.000 0.00 0.00 45.67 4.18
1385 1533 5.163519 CCATGAAATTTGTATCAGGTGGTCC 60.164 44.000 0.00 0.00 0.00 4.46
1465 1613 1.746615 GCATCAGGAAGCGCCAGAA 60.747 57.895 2.29 0.00 35.62 3.02
1467 1615 1.448540 ATCAGGAAGCGCCAGAACG 60.449 57.895 2.29 0.00 35.62 3.95
1501 1649 4.785453 GAAGGGGGACAGCGGCTG 62.785 72.222 27.43 27.43 37.52 4.85
1725 1882 1.597663 CAACCACTCACGAGAACAACC 59.402 52.381 0.00 0.00 0.00 3.77
1853 2013 3.319122 TGATCCATCTCATGTCGTTCGAT 59.681 43.478 0.00 0.00 0.00 3.59
1875 2035 1.550130 CCTTCTTGAGTACCCGGCCA 61.550 60.000 2.24 0.00 0.00 5.36
1903 2063 0.947660 CTCATGGATGCGTGGGATCG 60.948 60.000 0.00 0.00 0.00 3.69
1907 2067 1.071471 GGATGCGTGGGATCGGAAT 59.929 57.895 0.00 0.00 34.56 3.01
1964 2124 7.230849 TGATTGATTTGGTTGTTGATTAGCT 57.769 32.000 0.00 0.00 0.00 3.32
2074 2234 2.276201 GTGCACAAACCCAACCTTTTC 58.724 47.619 13.17 0.00 0.00 2.29
2109 2269 1.871039 CGAGTGGTAATTAATGGCCGG 59.129 52.381 0.00 0.00 0.00 6.13
2115 2279 5.300792 AGTGGTAATTAATGGCCGGTTATTG 59.699 40.000 1.90 0.00 0.00 1.90
2144 2316 6.446318 TCCACATGCAAATTACTCTTCAAAC 58.554 36.000 0.00 0.00 0.00 2.93
2147 2319 5.304101 ACATGCAAATTACTCTTCAAACCCA 59.696 36.000 0.00 0.00 0.00 4.51
2150 2322 5.009610 TGCAAATTACTCTTCAAACCCAGTC 59.990 40.000 0.00 0.00 0.00 3.51
2153 2325 2.821991 ACTCTTCAAACCCAGTCGAG 57.178 50.000 0.00 0.00 0.00 4.04
2161 2333 3.625764 TCAAACCCAGTCGAGACTTTTTG 59.374 43.478 17.31 17.31 40.20 2.44
2178 2350 9.643693 AGACTTTTTGGTGCAATTATAATTCAG 57.356 29.630 7.76 0.00 0.00 3.02
2205 2380 3.064271 TGTTTTTGCAGTAGTTCGTGACC 59.936 43.478 0.00 0.00 0.00 4.02
2206 2381 2.902705 TTTGCAGTAGTTCGTGACCT 57.097 45.000 0.00 0.00 0.00 3.85
2208 2383 4.530710 TTTGCAGTAGTTCGTGACCTAT 57.469 40.909 0.00 0.00 0.00 2.57
2209 2384 5.648178 TTTGCAGTAGTTCGTGACCTATA 57.352 39.130 0.00 0.00 0.00 1.31
2210 2385 4.627611 TGCAGTAGTTCGTGACCTATAC 57.372 45.455 0.00 0.00 0.00 1.47
2223 2398 7.759465 TCGTGACCTATACTAACTCTTTGAAG 58.241 38.462 0.00 0.00 0.00 3.02
2236 2411 5.527033 ACTCTTTGAAGCAAATTTGAGAGC 58.473 37.500 22.31 6.24 32.70 4.09
2238 2413 4.275689 TCTTTGAAGCAAATTTGAGAGCGA 59.724 37.500 22.31 5.79 32.70 4.93
2247 2422 9.664332 AAGCAAATTTGAGAGCGATATCTATAT 57.336 29.630 22.31 0.00 0.00 0.86
2352 2537 6.620877 ATTTATGAACTAGTGGTGGTCTCA 57.379 37.500 0.00 0.00 0.00 3.27
2419 2609 9.823647 AAAATAATATGTTGTGTTGTGTGGAAA 57.176 25.926 0.00 0.00 0.00 3.13
2424 2614 5.398603 TGTTGTGTTGTGTGGAAATTTCT 57.601 34.783 17.42 0.00 0.00 2.52
2464 2654 4.425520 TGTGACGTGCGAAATGATATGTA 58.574 39.130 0.00 0.00 0.00 2.29
2468 2658 5.231357 TGACGTGCGAAATGATATGTAGTTC 59.769 40.000 0.00 0.00 0.00 3.01
2510 2700 4.313020 GGATACTCCGGATCCCTAACTA 57.687 50.000 3.57 0.00 37.49 2.24
2533 2723 4.181010 CCATGAGTCAGGCCCGGG 62.181 72.222 19.09 19.09 0.00 5.73
2552 2742 1.308998 GGCAACCACCGGATAATCTG 58.691 55.000 9.46 0.00 0.00 2.90
2570 2760 9.520204 GATAATCTGGTTTCCATTGTACATTTG 57.480 33.333 0.00 0.00 30.82 2.32
2584 2775 4.892934 TGTACATTTGGAAACTTGAGGCTT 59.107 37.500 0.00 0.00 0.00 4.35
2610 2801 0.537371 CCAAAGACTCGGGGTGCTTT 60.537 55.000 0.00 0.00 0.00 3.51
2623 2814 2.124060 TGCTTTGGCGGCTTCAACA 61.124 52.632 11.43 0.00 42.25 3.33
2625 2816 1.370414 CTTTGGCGGCTTCAACACG 60.370 57.895 11.43 0.00 0.00 4.49
2645 2837 0.105194 ACAAGGGGAAGGGTTTTGGG 60.105 55.000 0.00 0.00 0.00 4.12
2664 2856 3.009584 TGGGGTTTGAGTTTTGGCTTTTT 59.990 39.130 0.00 0.00 0.00 1.94
2715 2911 6.231951 TGAGTAATACAATGTTTTCACCCGA 58.768 36.000 0.00 0.00 0.00 5.14
2759 2955 3.665173 GCACTAAGCATTTCTCTTCCG 57.335 47.619 0.00 0.00 44.79 4.30
2760 2956 2.223135 GCACTAAGCATTTCTCTTCCGC 60.223 50.000 0.00 0.00 44.79 5.54
2761 2957 2.352960 CACTAAGCATTTCTCTTCCGCC 59.647 50.000 0.00 0.00 0.00 6.13
2762 2958 2.237392 ACTAAGCATTTCTCTTCCGCCT 59.763 45.455 0.00 0.00 0.00 5.52
2763 2959 2.206576 AAGCATTTCTCTTCCGCCTT 57.793 45.000 0.00 0.00 0.00 4.35
2764 2960 2.206576 AGCATTTCTCTTCCGCCTTT 57.793 45.000 0.00 0.00 0.00 3.11
2765 2961 3.350219 AGCATTTCTCTTCCGCCTTTA 57.650 42.857 0.00 0.00 0.00 1.85
2766 2962 3.686016 AGCATTTCTCTTCCGCCTTTAA 58.314 40.909 0.00 0.00 0.00 1.52
2767 2963 3.440522 AGCATTTCTCTTCCGCCTTTAAC 59.559 43.478 0.00 0.00 0.00 2.01
2768 2964 3.190535 GCATTTCTCTTCCGCCTTTAACA 59.809 43.478 0.00 0.00 0.00 2.41
2769 2965 4.142381 GCATTTCTCTTCCGCCTTTAACAT 60.142 41.667 0.00 0.00 0.00 2.71
2770 2966 5.573146 CATTTCTCTTCCGCCTTTAACATC 58.427 41.667 0.00 0.00 0.00 3.06
2771 2967 3.261981 TCTCTTCCGCCTTTAACATCC 57.738 47.619 0.00 0.00 0.00 3.51
2772 2968 2.838202 TCTCTTCCGCCTTTAACATCCT 59.162 45.455 0.00 0.00 0.00 3.24
2773 2969 2.939103 CTCTTCCGCCTTTAACATCCTG 59.061 50.000 0.00 0.00 0.00 3.86
2774 2970 2.304761 TCTTCCGCCTTTAACATCCTGT 59.695 45.455 0.00 0.00 0.00 4.00
2775 2971 2.396590 TCCGCCTTTAACATCCTGTC 57.603 50.000 0.00 0.00 0.00 3.51
2776 2972 1.906574 TCCGCCTTTAACATCCTGTCT 59.093 47.619 0.00 0.00 0.00 3.41
2777 2973 2.304761 TCCGCCTTTAACATCCTGTCTT 59.695 45.455 0.00 0.00 0.00 3.01
2778 2974 3.516300 TCCGCCTTTAACATCCTGTCTTA 59.484 43.478 0.00 0.00 0.00 2.10
2779 2975 4.020039 TCCGCCTTTAACATCCTGTCTTAA 60.020 41.667 0.00 0.00 0.00 1.85
2780 2976 4.881850 CCGCCTTTAACATCCTGTCTTAAT 59.118 41.667 0.00 0.00 0.00 1.40
2781 2977 6.053005 CCGCCTTTAACATCCTGTCTTAATA 58.947 40.000 0.00 0.00 0.00 0.98
2782 2978 6.202954 CCGCCTTTAACATCCTGTCTTAATAG 59.797 42.308 0.00 0.00 0.00 1.73
2783 2979 6.761714 CGCCTTTAACATCCTGTCTTAATAGT 59.238 38.462 0.00 0.00 0.00 2.12
2784 2980 7.254455 CGCCTTTAACATCCTGTCTTAATAGTG 60.254 40.741 0.00 0.00 0.00 2.74
2785 2981 7.553044 GCCTTTAACATCCTGTCTTAATAGTGT 59.447 37.037 0.00 0.00 0.00 3.55
2786 2982 8.883731 CCTTTAACATCCTGTCTTAATAGTGTG 58.116 37.037 0.00 0.00 0.00 3.82
2787 2983 8.786826 TTTAACATCCTGTCTTAATAGTGTGG 57.213 34.615 0.00 0.00 0.00 4.17
2788 2984 4.770795 ACATCCTGTCTTAATAGTGTGGC 58.229 43.478 0.00 0.00 0.00 5.01
2789 2985 4.471386 ACATCCTGTCTTAATAGTGTGGCT 59.529 41.667 0.00 0.00 0.00 4.75
2790 2986 5.045578 ACATCCTGTCTTAATAGTGTGGCTT 60.046 40.000 0.00 0.00 0.00 4.35
2791 2987 5.086104 TCCTGTCTTAATAGTGTGGCTTC 57.914 43.478 0.00 0.00 0.00 3.86
2792 2988 4.081087 TCCTGTCTTAATAGTGTGGCTTCC 60.081 45.833 0.00 0.00 0.00 3.46
2793 2989 4.192317 CTGTCTTAATAGTGTGGCTTCCC 58.808 47.826 0.00 0.00 0.00 3.97
2794 2990 3.844211 TGTCTTAATAGTGTGGCTTCCCT 59.156 43.478 0.00 0.00 0.00 4.20
2795 2991 5.027460 TGTCTTAATAGTGTGGCTTCCCTA 58.973 41.667 0.00 0.00 0.00 3.53
2796 2992 5.486063 TGTCTTAATAGTGTGGCTTCCCTAA 59.514 40.000 0.00 0.00 0.00 2.69
2797 2993 6.049790 GTCTTAATAGTGTGGCTTCCCTAAG 58.950 44.000 0.00 0.00 35.68 2.18
2798 2994 5.962031 TCTTAATAGTGTGGCTTCCCTAAGA 59.038 40.000 0.00 0.00 34.37 2.10
2799 2995 4.489306 AATAGTGTGGCTTCCCTAAGAC 57.511 45.455 0.00 0.00 41.59 3.01
2800 2996 2.031495 AGTGTGGCTTCCCTAAGACT 57.969 50.000 0.00 0.00 41.78 3.24
2801 2997 2.339769 AGTGTGGCTTCCCTAAGACTT 58.660 47.619 0.00 0.00 41.78 3.01
2802 2998 2.039084 AGTGTGGCTTCCCTAAGACTTG 59.961 50.000 0.00 0.00 41.78 3.16
2803 2999 2.038557 GTGTGGCTTCCCTAAGACTTGA 59.961 50.000 0.00 0.00 41.78 3.02
2804 3000 2.708861 TGTGGCTTCCCTAAGACTTGAA 59.291 45.455 0.00 0.00 41.78 2.69
2805 3001 3.137544 TGTGGCTTCCCTAAGACTTGAAA 59.862 43.478 0.00 0.00 41.78 2.69
2806 3002 4.202567 TGTGGCTTCCCTAAGACTTGAAAT 60.203 41.667 0.00 0.00 41.78 2.17
2807 3003 4.767409 GTGGCTTCCCTAAGACTTGAAATT 59.233 41.667 0.00 0.00 41.78 1.82
2808 3004 5.010282 TGGCTTCCCTAAGACTTGAAATTC 58.990 41.667 0.00 0.00 41.78 2.17
2809 3005 5.010282 GGCTTCCCTAAGACTTGAAATTCA 58.990 41.667 0.00 0.00 37.79 2.57
2810 3006 5.654209 GGCTTCCCTAAGACTTGAAATTCAT 59.346 40.000 0.00 0.00 37.79 2.57
2811 3007 6.828785 GGCTTCCCTAAGACTTGAAATTCATA 59.171 38.462 0.00 0.00 37.79 2.15
2812 3008 7.339466 GGCTTCCCTAAGACTTGAAATTCATAA 59.661 37.037 0.00 0.00 37.79 1.90
2813 3009 8.907885 GCTTCCCTAAGACTTGAAATTCATAAT 58.092 33.333 0.00 0.00 34.37 1.28
2840 3036 8.462143 TGACTACAAAATTAGAGAATCGACAC 57.538 34.615 0.00 0.00 42.67 3.67
2841 3037 8.085909 TGACTACAAAATTAGAGAATCGACACA 58.914 33.333 0.00 0.00 42.67 3.72
2842 3038 9.088512 GACTACAAAATTAGAGAATCGACACAT 57.911 33.333 0.00 0.00 42.67 3.21
2846 3042 9.653287 ACAAAATTAGAGAATCGACACATAAGA 57.347 29.630 0.00 0.00 42.67 2.10
2847 3043 9.907576 CAAAATTAGAGAATCGACACATAAGAC 57.092 33.333 0.00 0.00 42.67 3.01
2848 3044 9.653287 AAAATTAGAGAATCGACACATAAGACA 57.347 29.630 0.00 0.00 42.67 3.41
2849 3045 9.653287 AAATTAGAGAATCGACACATAAGACAA 57.347 29.630 0.00 0.00 42.67 3.18
2850 3046 8.635877 ATTAGAGAATCGACACATAAGACAAC 57.364 34.615 0.00 0.00 42.67 3.32
2851 3047 6.274157 AGAGAATCGACACATAAGACAACT 57.726 37.500 0.00 0.00 42.67 3.16
2852 3048 6.326375 AGAGAATCGACACATAAGACAACTC 58.674 40.000 0.00 0.00 42.67 3.01
2853 3049 6.151985 AGAGAATCGACACATAAGACAACTCT 59.848 38.462 0.00 0.00 42.67 3.24
2854 3050 6.326375 AGAATCGACACATAAGACAACTCTC 58.674 40.000 0.00 0.00 0.00 3.20
2855 3051 5.906113 ATCGACACATAAGACAACTCTCT 57.094 39.130 0.00 0.00 0.00 3.10
2856 3052 5.707242 TCGACACATAAGACAACTCTCTT 57.293 39.130 0.00 0.00 34.72 2.85
2857 3053 5.700846 TCGACACATAAGACAACTCTCTTC 58.299 41.667 0.00 0.00 32.54 2.87
2858 3054 5.473846 TCGACACATAAGACAACTCTCTTCT 59.526 40.000 0.00 0.00 32.54 2.85
2859 3055 6.016192 TCGACACATAAGACAACTCTCTTCTT 60.016 38.462 0.00 0.00 32.54 2.52
2860 3056 6.642950 CGACACATAAGACAACTCTCTTCTTT 59.357 38.462 0.00 0.00 32.54 2.52
2861 3057 7.169982 CGACACATAAGACAACTCTCTTCTTTT 59.830 37.037 0.00 0.00 32.54 2.27
2862 3058 8.371770 ACACATAAGACAACTCTCTTCTTTTC 57.628 34.615 0.00 0.00 32.54 2.29
2863 3059 7.442666 ACACATAAGACAACTCTCTTCTTTTCC 59.557 37.037 0.00 0.00 32.54 3.13
2864 3060 7.659390 CACATAAGACAACTCTCTTCTTTTCCT 59.341 37.037 0.00 0.00 32.54 3.36
2865 3061 8.214364 ACATAAGACAACTCTCTTCTTTTCCTT 58.786 33.333 0.00 0.00 32.54 3.36
2866 3062 9.061435 CATAAGACAACTCTCTTCTTTTCCTTT 57.939 33.333 0.00 0.00 32.54 3.11
2867 3063 7.946381 AAGACAACTCTCTTCTTTTCCTTTT 57.054 32.000 0.00 0.00 0.00 2.27
2868 3064 7.561021 AGACAACTCTCTTCTTTTCCTTTTC 57.439 36.000 0.00 0.00 0.00 2.29
2869 3065 7.342581 AGACAACTCTCTTCTTTTCCTTTTCT 58.657 34.615 0.00 0.00 0.00 2.52
2870 3066 7.831690 AGACAACTCTCTTCTTTTCCTTTTCTT 59.168 33.333 0.00 0.00 0.00 2.52
2871 3067 8.354711 ACAACTCTCTTCTTTTCCTTTTCTTT 57.645 30.769 0.00 0.00 0.00 2.52
2872 3068 8.807118 ACAACTCTCTTCTTTTCCTTTTCTTTT 58.193 29.630 0.00 0.00 0.00 2.27
2873 3069 9.645059 CAACTCTCTTCTTTTCCTTTTCTTTTT 57.355 29.630 0.00 0.00 0.00 1.94
2874 3070 9.645059 AACTCTCTTCTTTTCCTTTTCTTTTTG 57.355 29.630 0.00 0.00 0.00 2.44
2875 3071 8.253810 ACTCTCTTCTTTTCCTTTTCTTTTTGG 58.746 33.333 0.00 0.00 0.00 3.28
2876 3072 7.555965 TCTCTTCTTTTCCTTTTCTTTTTGGG 58.444 34.615 0.00 0.00 0.00 4.12
2877 3073 6.649155 TCTTCTTTTCCTTTTCTTTTTGGGG 58.351 36.000 0.00 0.00 0.00 4.96
2878 3074 6.214615 TCTTCTTTTCCTTTTCTTTTTGGGGT 59.785 34.615 0.00 0.00 0.00 4.95
2879 3075 5.984725 TCTTTTCCTTTTCTTTTTGGGGTC 58.015 37.500 0.00 0.00 0.00 4.46
2880 3076 5.485708 TCTTTTCCTTTTCTTTTTGGGGTCA 59.514 36.000 0.00 0.00 0.00 4.02
2881 3077 4.746535 TTCCTTTTCTTTTTGGGGTCAC 57.253 40.909 0.00 0.00 0.00 3.67
2882 3078 3.714144 TCCTTTTCTTTTTGGGGTCACA 58.286 40.909 0.00 0.00 0.00 3.58
2883 3079 4.097418 TCCTTTTCTTTTTGGGGTCACAA 58.903 39.130 0.00 0.00 0.00 3.33
2884 3080 4.532521 TCCTTTTCTTTTTGGGGTCACAAA 59.467 37.500 0.00 0.00 38.48 2.83
2885 3081 5.190726 TCCTTTTCTTTTTGGGGTCACAAAT 59.809 36.000 0.00 0.00 39.80 2.32
2886 3082 5.527214 CCTTTTCTTTTTGGGGTCACAAATC 59.473 40.000 0.00 0.00 39.80 2.17
2887 3083 5.948742 TTTCTTTTTGGGGTCACAAATCT 57.051 34.783 0.00 0.00 39.80 2.40
2888 3084 5.529581 TTCTTTTTGGGGTCACAAATCTC 57.470 39.130 0.00 0.00 39.80 2.75
2889 3085 3.568007 TCTTTTTGGGGTCACAAATCTCG 59.432 43.478 0.00 0.00 39.80 4.04
2890 3086 1.904287 TTTGGGGTCACAAATCTCGG 58.096 50.000 0.00 0.00 35.57 4.63
2891 3087 0.037590 TTGGGGTCACAAATCTCGGG 59.962 55.000 0.00 0.00 0.00 5.14
2892 3088 0.838554 TGGGGTCACAAATCTCGGGA 60.839 55.000 0.00 0.00 0.00 5.14
2893 3089 0.326927 GGGGTCACAAATCTCGGGAA 59.673 55.000 0.00 0.00 0.00 3.97
2894 3090 1.450025 GGGTCACAAATCTCGGGAAC 58.550 55.000 0.00 0.00 0.00 3.62
2909 3105 0.033366 GGAACCAACAACATGTGGGC 59.967 55.000 4.95 0.00 45.59 5.36
2910 3106 1.039856 GAACCAACAACATGTGGGCT 58.960 50.000 4.95 0.00 45.59 5.19
2911 3107 2.235016 GAACCAACAACATGTGGGCTA 58.765 47.619 4.95 0.00 45.59 3.93
2912 3108 2.373335 ACCAACAACATGTGGGCTAA 57.627 45.000 4.95 0.00 45.59 3.09
2913 3109 2.672098 ACCAACAACATGTGGGCTAAA 58.328 42.857 4.95 0.00 45.59 1.85
2914 3110 3.238597 ACCAACAACATGTGGGCTAAAT 58.761 40.909 4.95 0.00 45.59 1.40
2915 3111 3.645687 ACCAACAACATGTGGGCTAAATT 59.354 39.130 4.95 0.00 45.59 1.82
2916 3112 3.995705 CCAACAACATGTGGGCTAAATTG 59.004 43.478 4.95 0.00 34.12 2.32
2917 3113 4.502950 CCAACAACATGTGGGCTAAATTGT 60.503 41.667 4.95 0.00 34.12 2.71
2918 3114 4.519540 ACAACATGTGGGCTAAATTGTC 57.480 40.909 4.95 0.00 0.00 3.18
2919 3115 3.258123 ACAACATGTGGGCTAAATTGTCC 59.742 43.478 4.95 0.00 0.00 4.02
2920 3116 3.168035 ACATGTGGGCTAAATTGTCCA 57.832 42.857 0.00 0.00 39.71 4.02
2921 3117 3.711863 ACATGTGGGCTAAATTGTCCAT 58.288 40.909 0.00 0.00 44.16 3.41
2922 3118 4.865905 ACATGTGGGCTAAATTGTCCATA 58.134 39.130 0.00 0.00 44.16 2.74
2923 3119 4.644685 ACATGTGGGCTAAATTGTCCATAC 59.355 41.667 0.00 0.00 44.16 2.39
2924 3120 4.308526 TGTGGGCTAAATTGTCCATACA 57.691 40.909 0.00 0.00 44.16 2.29
2925 3121 4.013728 TGTGGGCTAAATTGTCCATACAC 58.986 43.478 0.00 0.00 44.16 2.90
2926 3122 4.263727 TGTGGGCTAAATTGTCCATACACT 60.264 41.667 0.00 0.00 44.16 3.55
2927 3123 4.705023 GTGGGCTAAATTGTCCATACACTT 59.295 41.667 0.00 0.00 44.16 3.16
2928 3124 5.883673 GTGGGCTAAATTGTCCATACACTTA 59.116 40.000 0.00 0.00 44.16 2.24
2929 3125 6.038271 GTGGGCTAAATTGTCCATACACTTAG 59.962 42.308 0.00 0.00 44.16 2.18
2930 3126 6.069905 TGGGCTAAATTGTCCATACACTTAGA 60.070 38.462 9.27 0.00 36.71 2.10
2931 3127 6.483640 GGGCTAAATTGTCCATACACTTAGAG 59.516 42.308 9.27 0.00 35.30 2.43
2932 3128 6.017852 GGCTAAATTGTCCATACACTTAGAGC 60.018 42.308 9.27 8.00 37.02 4.09
2933 3129 6.538742 GCTAAATTGTCCATACACTTAGAGCA 59.461 38.462 9.27 0.00 37.34 4.26
2934 3130 7.065803 GCTAAATTGTCCATACACTTAGAGCAA 59.934 37.037 9.27 0.00 37.34 3.91
2935 3131 6.743575 AATTGTCCATACACTTAGAGCAAC 57.256 37.500 0.00 0.00 34.61 4.17
2936 3132 4.202245 TGTCCATACACTTAGAGCAACC 57.798 45.455 0.00 0.00 0.00 3.77
2937 3133 3.580895 TGTCCATACACTTAGAGCAACCA 59.419 43.478 0.00 0.00 0.00 3.67
2938 3134 4.225042 TGTCCATACACTTAGAGCAACCAT 59.775 41.667 0.00 0.00 0.00 3.55
2939 3135 4.572389 GTCCATACACTTAGAGCAACCATG 59.428 45.833 0.00 0.00 0.00 3.66
2940 3136 4.469586 TCCATACACTTAGAGCAACCATGA 59.530 41.667 0.00 0.00 0.00 3.07
2941 3137 4.813161 CCATACACTTAGAGCAACCATGAG 59.187 45.833 0.00 0.00 0.00 2.90
2942 3138 5.423015 CATACACTTAGAGCAACCATGAGT 58.577 41.667 0.00 0.00 0.00 3.41
2943 3139 3.931578 ACACTTAGAGCAACCATGAGTC 58.068 45.455 0.00 0.00 0.00 3.36
2944 3140 3.580458 ACACTTAGAGCAACCATGAGTCT 59.420 43.478 0.00 0.00 0.00 3.24
2945 3141 3.931468 CACTTAGAGCAACCATGAGTCTG 59.069 47.826 0.00 0.00 0.00 3.51
2946 3142 3.580458 ACTTAGAGCAACCATGAGTCTGT 59.420 43.478 0.00 0.00 0.00 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 6.096987 TGAGCTATCTACCTTTCGATTTGAGT 59.903 38.462 0.00 0.00 0.00 3.41
18 19 8.764524 ATCGATGGTTAATTTGAGCTATCTAC 57.235 34.615 0.00 0.00 0.00 2.59
23 24 6.582636 AGTGATCGATGGTTAATTTGAGCTA 58.417 36.000 0.54 0.00 0.00 3.32
24 25 5.431765 AGTGATCGATGGTTAATTTGAGCT 58.568 37.500 0.54 0.00 0.00 4.09
25 26 5.525378 AGAGTGATCGATGGTTAATTTGAGC 59.475 40.000 0.54 0.00 0.00 4.26
27 28 6.049149 GGAGAGTGATCGATGGTTAATTTGA 58.951 40.000 0.54 0.00 0.00 2.69
38 39 4.404073 AGCTTAAGTTGGAGAGTGATCGAT 59.596 41.667 0.00 0.00 0.00 3.59
39 40 3.764434 AGCTTAAGTTGGAGAGTGATCGA 59.236 43.478 4.02 0.00 0.00 3.59
40 41 4.116747 AGCTTAAGTTGGAGAGTGATCG 57.883 45.455 4.02 0.00 0.00 3.69
41 42 6.428159 TGAAAAGCTTAAGTTGGAGAGTGATC 59.572 38.462 0.00 0.00 0.00 2.92
53 54 6.031751 TGTTTGTGGTTGAAAAGCTTAAGT 57.968 33.333 0.00 0.00 46.34 2.24
72 73 6.258160 GTGCTGCTTCAATCGTTATATGTTT 58.742 36.000 0.00 0.00 0.00 2.83
79 80 1.459209 CACGTGCTGCTTCAATCGTTA 59.541 47.619 0.82 0.00 0.00 3.18
80 81 0.235665 CACGTGCTGCTTCAATCGTT 59.764 50.000 0.82 0.00 0.00 3.85
81 82 0.880278 ACACGTGCTGCTTCAATCGT 60.880 50.000 17.22 0.02 0.00 3.73
82 83 1.067693 TACACGTGCTGCTTCAATCG 58.932 50.000 17.22 0.00 0.00 3.34
83 84 3.536158 TTTACACGTGCTGCTTCAATC 57.464 42.857 17.22 0.00 0.00 2.67
84 85 4.503741 AATTTACACGTGCTGCTTCAAT 57.496 36.364 17.22 0.78 0.00 2.57
85 86 3.980646 AATTTACACGTGCTGCTTCAA 57.019 38.095 17.22 0.00 0.00 2.69
86 87 5.621197 ATTAATTTACACGTGCTGCTTCA 57.379 34.783 17.22 0.00 0.00 3.02
87 88 6.032460 GTGAATTAATTTACACGTGCTGCTTC 59.968 38.462 17.22 8.58 0.00 3.86
88 89 5.856455 GTGAATTAATTTACACGTGCTGCTT 59.144 36.000 17.22 7.33 0.00 3.91
89 90 5.181245 AGTGAATTAATTTACACGTGCTGCT 59.819 36.000 21.19 0.00 38.15 4.24
90 91 5.390613 AGTGAATTAATTTACACGTGCTGC 58.609 37.500 21.19 0.00 38.15 5.25
91 92 6.855914 ACAAGTGAATTAATTTACACGTGCTG 59.144 34.615 23.45 16.37 42.82 4.41
92 93 6.855914 CACAAGTGAATTAATTTACACGTGCT 59.144 34.615 23.45 14.40 42.82 4.40
133 134 0.872388 GCCGTAACCACTTTCCACAG 59.128 55.000 0.00 0.00 0.00 3.66
134 135 0.180642 TGCCGTAACCACTTTCCACA 59.819 50.000 0.00 0.00 0.00 4.17
137 138 1.467342 GTCATGCCGTAACCACTTTCC 59.533 52.381 0.00 0.00 0.00 3.13
144 145 1.084289 GGTCAAGTCATGCCGTAACC 58.916 55.000 0.00 0.00 0.00 2.85
146 147 2.552599 TTGGTCAAGTCATGCCGTAA 57.447 45.000 0.00 0.00 0.00 3.18
149 150 2.489329 AGATTTTGGTCAAGTCATGCCG 59.511 45.455 0.00 0.00 0.00 5.69
153 154 5.537674 AGAGCAAAGATTTTGGTCAAGTCAT 59.462 36.000 26.05 9.57 46.12 3.06
181 182 9.953565 TCCTGCTAAATTTGTAGTGTACTAAAT 57.046 29.630 0.00 0.00 0.00 1.40
182 183 9.953565 ATCCTGCTAAATTTGTAGTGTACTAAA 57.046 29.630 0.00 0.00 0.00 1.85
190 191 5.648092 GTCACCATCCTGCTAAATTTGTAGT 59.352 40.000 0.00 0.00 0.00 2.73
191 192 5.882557 AGTCACCATCCTGCTAAATTTGTAG 59.117 40.000 0.00 0.38 0.00 2.74
192 193 5.815581 AGTCACCATCCTGCTAAATTTGTA 58.184 37.500 0.00 0.00 0.00 2.41
193 194 4.666512 AGTCACCATCCTGCTAAATTTGT 58.333 39.130 0.00 0.00 0.00 2.83
293 296 6.560003 TGAGGAAGAGACAAATATTAGGCA 57.440 37.500 0.00 0.00 0.00 4.75
298 301 6.642733 TCCCTTGAGGAAGAGACAAATATT 57.357 37.500 0.00 0.00 43.78 1.28
328 331 3.531538 ACAGTAACCAACTATGCCATCG 58.468 45.455 0.00 0.00 35.76 3.84
343 346 6.112734 CACCATTGCCTATGTTAGACAGTAA 58.887 40.000 0.00 0.00 31.99 2.24
410 416 3.327757 TGTCAGCTACTCCTTTTGATGGT 59.672 43.478 0.00 0.00 0.00 3.55
411 417 3.942829 TGTCAGCTACTCCTTTTGATGG 58.057 45.455 0.00 0.00 0.00 3.51
437 443 3.958798 TCCATGCAGAGGTAGGTAGTAAC 59.041 47.826 7.75 0.00 0.00 2.50
438 444 4.259933 TCCATGCAGAGGTAGGTAGTAA 57.740 45.455 7.75 0.00 0.00 2.24
439 445 3.965470 TCCATGCAGAGGTAGGTAGTA 57.035 47.619 7.75 0.00 0.00 1.82
440 446 2.848678 TCCATGCAGAGGTAGGTAGT 57.151 50.000 7.75 0.00 0.00 2.73
441 447 3.643320 TGAATCCATGCAGAGGTAGGTAG 59.357 47.826 7.75 0.00 0.00 3.18
477 483 9.461312 AGTCACAAACCAATCTAGCATTAATAA 57.539 29.630 0.00 0.00 0.00 1.40
479 485 7.944729 AGTCACAAACCAATCTAGCATTAAT 57.055 32.000 0.00 0.00 0.00 1.40
480 486 8.892723 CATAGTCACAAACCAATCTAGCATTAA 58.107 33.333 0.00 0.00 0.00 1.40
481 487 8.264347 TCATAGTCACAAACCAATCTAGCATTA 58.736 33.333 0.00 0.00 0.00 1.90
493 499 6.238842 CCAATGGATGATCATAGTCACAAACC 60.239 42.308 8.54 2.77 0.00 3.27
494 500 6.319658 ACCAATGGATGATCATAGTCACAAAC 59.680 38.462 8.54 0.00 0.00 2.93
496 502 6.005066 ACCAATGGATGATCATAGTCACAA 57.995 37.500 8.54 0.00 0.00 3.33
521 530 8.789762 GCCACCAAAAGGAAATATATATAACGT 58.210 33.333 0.00 0.00 0.00 3.99
522 531 8.241367 GGCCACCAAAAGGAAATATATATAACG 58.759 37.037 0.00 0.00 0.00 3.18
523 532 8.241367 CGGCCACCAAAAGGAAATATATATAAC 58.759 37.037 2.24 0.00 0.00 1.89
524 533 7.394923 CCGGCCACCAAAAGGAAATATATATAA 59.605 37.037 2.24 0.00 0.00 0.98
525 534 6.887545 CCGGCCACCAAAAGGAAATATATATA 59.112 38.462 2.24 0.00 0.00 0.86
526 535 5.714806 CCGGCCACCAAAAGGAAATATATAT 59.285 40.000 2.24 0.00 0.00 0.86
527 536 5.074115 CCGGCCACCAAAAGGAAATATATA 58.926 41.667 2.24 0.00 0.00 0.86
528 537 3.895041 CCGGCCACCAAAAGGAAATATAT 59.105 43.478 2.24 0.00 0.00 0.86
569 578 2.036217 TCGAAACTAAAGCACCCTCGAA 59.964 45.455 0.00 0.00 31.50 3.71
572 581 2.742589 CCTTCGAAACTAAAGCACCCTC 59.257 50.000 0.00 0.00 0.00 4.30
669 679 9.753674 TGTACTATATGTGTATCTCCATCATGA 57.246 33.333 0.00 0.00 0.00 3.07
670 680 9.794685 GTGTACTATATGTGTATCTCCATCATG 57.205 37.037 0.00 0.00 0.00 3.07
671 681 9.760926 AGTGTACTATATGTGTATCTCCATCAT 57.239 33.333 0.00 0.00 0.00 2.45
691 701 4.776743 GCATGCATGTGCTTATAGTGTAC 58.223 43.478 26.79 2.16 41.82 2.90
693 703 3.976793 GCATGCATGTGCTTATAGTGT 57.023 42.857 26.79 0.00 41.82 3.55
764 775 7.646922 CGTTGCGTTAGTCTTATTCTAACCTAT 59.353 37.037 9.29 0.00 42.14 2.57
995 1025 0.462759 CGGCTTCTCCACCATCCTTC 60.463 60.000 0.00 0.00 34.01 3.46
999 1029 2.514824 GCCGGCTTCTCCACCATC 60.515 66.667 22.15 0.00 34.01 3.51
1041 1071 0.687757 TCTCCTTATGCGCCTCCACT 60.688 55.000 4.18 0.00 0.00 4.00
1044 1074 1.115930 TCCTCTCCTTATGCGCCTCC 61.116 60.000 4.18 0.00 0.00 4.30
1186 1216 2.762327 GGAGGTAGTTCATCCACCGTAA 59.238 50.000 0.00 0.00 45.29 3.18
1188 1218 1.192428 GGAGGTAGTTCATCCACCGT 58.808 55.000 0.00 0.00 45.29 4.83
1292 1322 9.214953 CAATTACGAACAAGAAATCTAGAATGC 57.785 33.333 0.00 0.00 0.00 3.56
1307 1447 6.567687 ATGTTCCACAATCAATTACGAACA 57.432 33.333 0.00 0.00 35.07 3.18
1308 1453 7.148820 CCAAATGTTCCACAATCAATTACGAAC 60.149 37.037 0.00 0.00 0.00 3.95
1311 1456 5.576384 CCCAAATGTTCCACAATCAATTACG 59.424 40.000 0.00 0.00 0.00 3.18
1324 1469 1.014352 CGACCGATCCCAAATGTTCC 58.986 55.000 0.00 0.00 0.00 3.62
1340 1488 2.693267 AATTTAGCCTCCTGGACGAC 57.307 50.000 0.00 0.00 34.57 4.34
1385 1533 2.655364 ATCTTCGCCGCGATCACG 60.655 61.111 17.62 6.02 42.93 4.35
1501 1649 4.712425 CACCCTGCTGCTTTGCGC 62.712 66.667 0.00 0.00 39.77 6.09
1567 1715 1.359459 GCTGCTAACCGGTTCCTTCG 61.359 60.000 26.16 10.91 0.00 3.79
1793 1953 1.747355 ACGGCGCAGTAGTAGTAATGT 59.253 47.619 12.68 0.00 0.00 2.71
1833 1993 3.319122 TCATCGAACGACATGAGATGGAT 59.681 43.478 0.00 0.00 39.17 3.41
1853 2013 1.263356 CCGGGTACTCAAGAAGGTCA 58.737 55.000 0.00 0.00 0.00 4.02
1907 2067 2.941064 CGTATTCGTGGAGTAGAGTCCA 59.059 50.000 1.72 1.72 44.82 4.02
2074 2234 5.808042 ACCACTCGATCAATTGATTCAAG 57.192 39.130 21.57 19.03 34.37 3.02
2144 2316 1.873591 CACCAAAAAGTCTCGACTGGG 59.126 52.381 0.00 3.61 41.58 4.45
2147 2319 2.325583 TGCACCAAAAAGTCTCGACT 57.674 45.000 0.00 0.00 44.94 4.18
2150 2322 8.687824 AATTATAATTGCACCAAAAAGTCTCG 57.312 30.769 9.93 0.00 0.00 4.04
2153 2325 9.638239 TCTGAATTATAATTGCACCAAAAAGTC 57.362 29.630 15.39 0.00 0.00 3.01
2161 2333 8.931385 AACAACATCTGAATTATAATTGCACC 57.069 30.769 15.39 1.96 0.00 5.01
2178 2350 5.171337 CACGAACTACTGCAAAAACAACATC 59.829 40.000 0.00 0.00 0.00 3.06
2193 2368 7.784633 AGAGTTAGTATAGGTCACGAACTAC 57.215 40.000 0.00 0.00 40.49 2.73
2208 2383 9.337396 TCTCAAATTTGCTTCAAAGAGTTAGTA 57.663 29.630 13.54 0.00 36.76 1.82
2209 2384 8.225603 TCTCAAATTTGCTTCAAAGAGTTAGT 57.774 30.769 13.54 0.00 36.76 2.24
2210 2385 7.325579 GCTCTCAAATTTGCTTCAAAGAGTTAG 59.674 37.037 22.97 9.84 36.76 2.34
2247 2422 9.938280 CATTACCATCGGTATATCCTTTTCTTA 57.062 33.333 0.00 0.00 38.05 2.10
2352 2537 9.441580 ACTAGTGATGCAATAGAACCCAATGGT 62.442 40.741 8.65 0.00 39.77 3.55
2398 2583 8.203485 AGAAATTTCCACACAACACAACATATT 58.797 29.630 14.61 0.00 0.00 1.28
2419 2609 9.404848 CACAATATATCCATGGCTCATAGAAAT 57.595 33.333 6.96 0.00 0.00 2.17
2424 2614 6.070824 ACGTCACAATATATCCATGGCTCATA 60.071 38.462 6.96 4.60 0.00 2.15
2464 2654 3.886505 AGTCGAGAGTGTCTTTCAGAACT 59.113 43.478 0.00 0.00 0.00 3.01
2468 2658 3.312828 CCAAGTCGAGAGTGTCTTTCAG 58.687 50.000 0.00 0.00 0.00 3.02
2533 2723 1.308998 CAGATTATCCGGTGGTTGCC 58.691 55.000 0.00 0.00 0.00 4.52
2584 2775 1.374947 CCGAGTCTTTGGGGCTGAA 59.625 57.895 0.00 0.00 0.00 3.02
2593 2784 0.537371 CCAAAGCACCCCGAGTCTTT 60.537 55.000 0.00 0.00 0.00 2.52
2610 2801 2.970324 GTCGTGTTGAAGCCGCCA 60.970 61.111 0.00 0.00 0.00 5.69
2623 2814 0.554305 AAAACCCTTCCCCTTGTCGT 59.446 50.000 0.00 0.00 0.00 4.34
2625 2816 1.338107 CCAAAACCCTTCCCCTTGTC 58.662 55.000 0.00 0.00 0.00 3.18
2645 2837 3.181501 GCCAAAAAGCCAAAACTCAAACC 60.182 43.478 0.00 0.00 0.00 3.27
2664 2856 6.990798 TCATATTGTCATGTTTTTCTTGCCA 58.009 32.000 0.00 0.00 0.00 4.92
2737 2933 3.308323 CGGAAGAGAAATGCTTAGTGCTC 59.692 47.826 0.00 0.00 43.37 4.26
2738 2934 3.265791 CGGAAGAGAAATGCTTAGTGCT 58.734 45.455 0.00 0.00 43.37 4.40
2739 2935 2.223135 GCGGAAGAGAAATGCTTAGTGC 60.223 50.000 0.00 0.00 43.25 4.40
2740 2936 2.352960 GGCGGAAGAGAAATGCTTAGTG 59.647 50.000 0.00 0.00 0.00 2.74
2741 2937 2.237392 AGGCGGAAGAGAAATGCTTAGT 59.763 45.455 0.00 0.00 0.00 2.24
2742 2938 2.911484 AGGCGGAAGAGAAATGCTTAG 58.089 47.619 0.00 0.00 0.00 2.18
2743 2939 3.350219 AAGGCGGAAGAGAAATGCTTA 57.650 42.857 0.00 0.00 0.00 3.09
2744 2940 2.206576 AAGGCGGAAGAGAAATGCTT 57.793 45.000 0.00 0.00 0.00 3.91
2745 2941 2.206576 AAAGGCGGAAGAGAAATGCT 57.793 45.000 0.00 0.00 0.00 3.79
2746 2942 3.190535 TGTTAAAGGCGGAAGAGAAATGC 59.809 43.478 0.00 0.00 0.00 3.56
2747 2943 5.449177 GGATGTTAAAGGCGGAAGAGAAATG 60.449 44.000 0.00 0.00 0.00 2.32
2748 2944 4.640647 GGATGTTAAAGGCGGAAGAGAAAT 59.359 41.667 0.00 0.00 0.00 2.17
2749 2945 4.007659 GGATGTTAAAGGCGGAAGAGAAA 58.992 43.478 0.00 0.00 0.00 2.52
2750 2946 3.263425 AGGATGTTAAAGGCGGAAGAGAA 59.737 43.478 0.00 0.00 0.00 2.87
2751 2947 2.838202 AGGATGTTAAAGGCGGAAGAGA 59.162 45.455 0.00 0.00 0.00 3.10
2752 2948 2.939103 CAGGATGTTAAAGGCGGAAGAG 59.061 50.000 0.00 0.00 0.00 2.85
2753 2949 2.985896 CAGGATGTTAAAGGCGGAAGA 58.014 47.619 0.00 0.00 0.00 2.87
2767 2963 5.028549 AGCCACACTATTAAGACAGGATG 57.971 43.478 0.00 0.00 46.00 3.51
2768 2964 5.396884 GGAAGCCACACTATTAAGACAGGAT 60.397 44.000 0.00 0.00 0.00 3.24
2769 2965 4.081087 GGAAGCCACACTATTAAGACAGGA 60.081 45.833 0.00 0.00 0.00 3.86
2770 2966 4.192317 GGAAGCCACACTATTAAGACAGG 58.808 47.826 0.00 0.00 0.00 4.00
2771 2967 4.080863 AGGGAAGCCACACTATTAAGACAG 60.081 45.833 0.00 0.00 0.00 3.51
2772 2968 3.844211 AGGGAAGCCACACTATTAAGACA 59.156 43.478 0.00 0.00 0.00 3.41
2773 2969 4.489306 AGGGAAGCCACACTATTAAGAC 57.511 45.455 0.00 0.00 0.00 3.01
2774 2970 5.962031 TCTTAGGGAAGCCACACTATTAAGA 59.038 40.000 0.00 0.00 32.21 2.10
2775 2971 6.049790 GTCTTAGGGAAGCCACACTATTAAG 58.950 44.000 0.00 0.00 32.21 1.85
2776 2972 5.724854 AGTCTTAGGGAAGCCACACTATTAA 59.275 40.000 0.00 0.00 32.21 1.40
2777 2973 5.278061 AGTCTTAGGGAAGCCACACTATTA 58.722 41.667 0.00 0.00 32.21 0.98
2778 2974 4.104831 AGTCTTAGGGAAGCCACACTATT 58.895 43.478 0.00 0.00 32.21 1.73
2779 2975 3.725634 AGTCTTAGGGAAGCCACACTAT 58.274 45.455 0.00 0.00 32.21 2.12
2780 2976 3.185880 AGTCTTAGGGAAGCCACACTA 57.814 47.619 0.00 0.00 32.21 2.74
2781 2977 2.031495 AGTCTTAGGGAAGCCACACT 57.969 50.000 0.00 0.00 32.21 3.55
2782 2978 2.038557 TCAAGTCTTAGGGAAGCCACAC 59.961 50.000 0.00 0.00 32.21 3.82
2783 2979 2.334977 TCAAGTCTTAGGGAAGCCACA 58.665 47.619 0.00 0.00 32.21 4.17
2784 2980 3.418684 TTCAAGTCTTAGGGAAGCCAC 57.581 47.619 0.00 0.00 32.21 5.01
2785 2981 4.657814 ATTTCAAGTCTTAGGGAAGCCA 57.342 40.909 0.00 0.00 32.21 4.75
2786 2982 5.010282 TGAATTTCAAGTCTTAGGGAAGCC 58.990 41.667 0.00 0.00 32.21 4.35
2787 2983 6.765915 ATGAATTTCAAGTCTTAGGGAAGC 57.234 37.500 2.68 0.00 32.21 3.86
2814 3010 9.088512 GTGTCGATTCTCTAATTTTGTAGTCAT 57.911 33.333 0.00 0.00 0.00 3.06
2815 3011 8.085909 TGTGTCGATTCTCTAATTTTGTAGTCA 58.914 33.333 0.00 0.00 0.00 3.41
2816 3012 8.462143 TGTGTCGATTCTCTAATTTTGTAGTC 57.538 34.615 0.00 0.00 0.00 2.59
2820 3016 9.653287 TCTTATGTGTCGATTCTCTAATTTTGT 57.347 29.630 0.00 0.00 0.00 2.83
2821 3017 9.907576 GTCTTATGTGTCGATTCTCTAATTTTG 57.092 33.333 0.00 0.00 0.00 2.44
2822 3018 9.653287 TGTCTTATGTGTCGATTCTCTAATTTT 57.347 29.630 0.00 0.00 0.00 1.82
2823 3019 9.653287 TTGTCTTATGTGTCGATTCTCTAATTT 57.347 29.630 0.00 0.00 0.00 1.82
2824 3020 9.088512 GTTGTCTTATGTGTCGATTCTCTAATT 57.911 33.333 0.00 0.00 0.00 1.40
2825 3021 8.470805 AGTTGTCTTATGTGTCGATTCTCTAAT 58.529 33.333 0.00 0.00 0.00 1.73
2826 3022 7.827701 AGTTGTCTTATGTGTCGATTCTCTAA 58.172 34.615 0.00 0.00 0.00 2.10
2827 3023 7.337184 AGAGTTGTCTTATGTGTCGATTCTCTA 59.663 37.037 0.00 0.00 0.00 2.43
2828 3024 6.151985 AGAGTTGTCTTATGTGTCGATTCTCT 59.848 38.462 0.00 0.00 0.00 3.10
2829 3025 6.326375 AGAGTTGTCTTATGTGTCGATTCTC 58.674 40.000 0.00 0.00 0.00 2.87
2830 3026 6.151985 AGAGAGTTGTCTTATGTGTCGATTCT 59.848 38.462 0.00 0.00 30.97 2.40
2831 3027 6.326375 AGAGAGTTGTCTTATGTGTCGATTC 58.674 40.000 0.00 0.00 30.97 2.52
2832 3028 6.274157 AGAGAGTTGTCTTATGTGTCGATT 57.726 37.500 0.00 0.00 30.97 3.34
2833 3029 5.906113 AGAGAGTTGTCTTATGTGTCGAT 57.094 39.130 0.00 0.00 30.97 3.59
2834 3030 5.473846 AGAAGAGAGTTGTCTTATGTGTCGA 59.526 40.000 0.00 0.00 36.89 4.20
2835 3031 5.704888 AGAAGAGAGTTGTCTTATGTGTCG 58.295 41.667 0.00 0.00 36.89 4.35
2836 3032 7.954788 AAAGAAGAGAGTTGTCTTATGTGTC 57.045 36.000 0.00 0.00 36.89 3.67
2837 3033 7.442666 GGAAAAGAAGAGAGTTGTCTTATGTGT 59.557 37.037 0.00 0.00 36.89 3.72
2838 3034 7.659390 AGGAAAAGAAGAGAGTTGTCTTATGTG 59.341 37.037 0.00 0.00 36.89 3.21
2839 3035 7.740805 AGGAAAAGAAGAGAGTTGTCTTATGT 58.259 34.615 0.00 0.00 36.89 2.29
2840 3036 8.614469 AAGGAAAAGAAGAGAGTTGTCTTATG 57.386 34.615 0.00 0.00 36.89 1.90
2841 3037 9.634021 AAAAGGAAAAGAAGAGAGTTGTCTTAT 57.366 29.630 0.00 0.00 36.89 1.73
2842 3038 9.110502 GAAAAGGAAAAGAAGAGAGTTGTCTTA 57.889 33.333 0.00 0.00 36.89 2.10
2843 3039 7.831690 AGAAAAGGAAAAGAAGAGAGTTGTCTT 59.168 33.333 0.00 0.00 39.59 3.01
2844 3040 7.342581 AGAAAAGGAAAAGAAGAGAGTTGTCT 58.657 34.615 0.00 0.00 34.86 3.41
2845 3041 7.561021 AGAAAAGGAAAAGAAGAGAGTTGTC 57.439 36.000 0.00 0.00 0.00 3.18
2846 3042 7.946381 AAGAAAAGGAAAAGAAGAGAGTTGT 57.054 32.000 0.00 0.00 0.00 3.32
2847 3043 9.645059 AAAAAGAAAAGGAAAAGAAGAGAGTTG 57.355 29.630 0.00 0.00 0.00 3.16
2848 3044 9.645059 CAAAAAGAAAAGGAAAAGAAGAGAGTT 57.355 29.630 0.00 0.00 0.00 3.01
2849 3045 8.253810 CCAAAAAGAAAAGGAAAAGAAGAGAGT 58.746 33.333 0.00 0.00 0.00 3.24
2850 3046 7.708322 CCCAAAAAGAAAAGGAAAAGAAGAGAG 59.292 37.037 0.00 0.00 0.00 3.20
2851 3047 7.364673 CCCCAAAAAGAAAAGGAAAAGAAGAGA 60.365 37.037 0.00 0.00 0.00 3.10
2852 3048 6.763135 CCCCAAAAAGAAAAGGAAAAGAAGAG 59.237 38.462 0.00 0.00 0.00 2.85
2853 3049 6.214615 ACCCCAAAAAGAAAAGGAAAAGAAGA 59.785 34.615 0.00 0.00 0.00 2.87
2854 3050 6.414732 ACCCCAAAAAGAAAAGGAAAAGAAG 58.585 36.000 0.00 0.00 0.00 2.85
2855 3051 6.013293 TGACCCCAAAAAGAAAAGGAAAAGAA 60.013 34.615 0.00 0.00 0.00 2.52
2856 3052 5.485708 TGACCCCAAAAAGAAAAGGAAAAGA 59.514 36.000 0.00 0.00 0.00 2.52
2857 3053 5.584649 GTGACCCCAAAAAGAAAAGGAAAAG 59.415 40.000 0.00 0.00 0.00 2.27
2858 3054 5.013183 TGTGACCCCAAAAAGAAAAGGAAAA 59.987 36.000 0.00 0.00 0.00 2.29
2859 3055 4.532521 TGTGACCCCAAAAAGAAAAGGAAA 59.467 37.500 0.00 0.00 0.00 3.13
2860 3056 4.097418 TGTGACCCCAAAAAGAAAAGGAA 58.903 39.130 0.00 0.00 0.00 3.36
2861 3057 3.714144 TGTGACCCCAAAAAGAAAAGGA 58.286 40.909 0.00 0.00 0.00 3.36
2862 3058 4.479786 TTGTGACCCCAAAAAGAAAAGG 57.520 40.909 0.00 0.00 0.00 3.11
2863 3059 6.348498 AGATTTGTGACCCCAAAAAGAAAAG 58.652 36.000 0.00 0.00 37.81 2.27
2864 3060 6.306643 AGATTTGTGACCCCAAAAAGAAAA 57.693 33.333 0.00 0.00 37.81 2.29
2865 3061 5.451242 CGAGATTTGTGACCCCAAAAAGAAA 60.451 40.000 0.00 0.00 37.81 2.52
2866 3062 4.037446 CGAGATTTGTGACCCCAAAAAGAA 59.963 41.667 0.00 0.00 37.81 2.52
2867 3063 3.568007 CGAGATTTGTGACCCCAAAAAGA 59.432 43.478 0.00 0.00 37.81 2.52
2868 3064 3.305335 CCGAGATTTGTGACCCCAAAAAG 60.305 47.826 0.00 0.00 37.81 2.27
2869 3065 2.625790 CCGAGATTTGTGACCCCAAAAA 59.374 45.455 0.00 0.00 37.81 1.94
2870 3066 2.235016 CCGAGATTTGTGACCCCAAAA 58.765 47.619 0.00 0.00 37.81 2.44
2871 3067 1.546773 CCCGAGATTTGTGACCCCAAA 60.547 52.381 0.00 0.00 38.58 3.28
2872 3068 0.037590 CCCGAGATTTGTGACCCCAA 59.962 55.000 0.00 0.00 0.00 4.12
2873 3069 0.838554 TCCCGAGATTTGTGACCCCA 60.839 55.000 0.00 0.00 0.00 4.96
2874 3070 0.326927 TTCCCGAGATTTGTGACCCC 59.673 55.000 0.00 0.00 0.00 4.95
2875 3071 1.450025 GTTCCCGAGATTTGTGACCC 58.550 55.000 0.00 0.00 0.00 4.46
2876 3072 1.271163 TGGTTCCCGAGATTTGTGACC 60.271 52.381 0.00 0.00 0.00 4.02
2877 3073 2.178912 TGGTTCCCGAGATTTGTGAC 57.821 50.000 0.00 0.00 0.00 3.67
2878 3074 2.158740 TGTTGGTTCCCGAGATTTGTGA 60.159 45.455 0.00 0.00 0.00 3.58
2879 3075 2.226330 TGTTGGTTCCCGAGATTTGTG 58.774 47.619 0.00 0.00 0.00 3.33
2880 3076 2.621526 GTTGTTGGTTCCCGAGATTTGT 59.378 45.455 0.00 0.00 0.00 2.83
2881 3077 2.621055 TGTTGTTGGTTCCCGAGATTTG 59.379 45.455 0.00 0.00 0.00 2.32
2882 3078 2.938838 TGTTGTTGGTTCCCGAGATTT 58.061 42.857 0.00 0.00 0.00 2.17
2883 3079 2.649531 TGTTGTTGGTTCCCGAGATT 57.350 45.000 0.00 0.00 0.00 2.40
2884 3080 2.224769 ACATGTTGTTGGTTCCCGAGAT 60.225 45.455 0.00 0.00 0.00 2.75
2885 3081 1.142060 ACATGTTGTTGGTTCCCGAGA 59.858 47.619 0.00 0.00 0.00 4.04
2886 3082 1.266718 CACATGTTGTTGGTTCCCGAG 59.733 52.381 0.00 0.00 0.00 4.63
2887 3083 1.313772 CACATGTTGTTGGTTCCCGA 58.686 50.000 0.00 0.00 0.00 5.14
2888 3084 0.313672 CCACATGTTGTTGGTTCCCG 59.686 55.000 0.00 0.00 0.00 5.14
2889 3085 0.678950 CCCACATGTTGTTGGTTCCC 59.321 55.000 0.00 0.00 29.29 3.97
2890 3086 0.033366 GCCCACATGTTGTTGGTTCC 59.967 55.000 0.00 0.00 35.74 3.62
2891 3087 1.039856 AGCCCACATGTTGTTGGTTC 58.960 50.000 0.00 0.00 35.74 3.62
2892 3088 2.373335 TAGCCCACATGTTGTTGGTT 57.627 45.000 0.00 0.00 35.74 3.67
2893 3089 2.373335 TTAGCCCACATGTTGTTGGT 57.627 45.000 0.00 0.00 35.74 3.67
2894 3090 3.959535 ATTTAGCCCACATGTTGTTGG 57.040 42.857 0.00 0.00 36.35 3.77
2895 3091 4.630111 ACAATTTAGCCCACATGTTGTTG 58.370 39.130 0.00 0.00 0.00 3.33
2896 3092 4.262420 GGACAATTTAGCCCACATGTTGTT 60.262 41.667 0.00 0.00 0.00 2.83
2897 3093 3.258123 GGACAATTTAGCCCACATGTTGT 59.742 43.478 0.00 0.00 0.00 3.32
2898 3094 3.257873 TGGACAATTTAGCCCACATGTTG 59.742 43.478 0.00 0.00 0.00 3.33
2899 3095 3.505386 TGGACAATTTAGCCCACATGTT 58.495 40.909 0.00 0.00 0.00 2.71
2900 3096 3.168035 TGGACAATTTAGCCCACATGT 57.832 42.857 0.00 0.00 0.00 3.21
2901 3097 4.644234 TGTATGGACAATTTAGCCCACATG 59.356 41.667 0.00 0.00 30.68 3.21
2902 3098 4.644685 GTGTATGGACAATTTAGCCCACAT 59.355 41.667 0.00 0.00 37.31 3.21
2903 3099 4.013728 GTGTATGGACAATTTAGCCCACA 58.986 43.478 0.00 0.00 37.31 4.17
2904 3100 4.270008 AGTGTATGGACAATTTAGCCCAC 58.730 43.478 0.00 0.00 37.31 4.61
2905 3101 4.584638 AGTGTATGGACAATTTAGCCCA 57.415 40.909 0.00 0.00 37.31 5.36
2906 3102 6.354130 TCTAAGTGTATGGACAATTTAGCCC 58.646 40.000 0.00 0.00 40.87 5.19
2907 3103 6.017852 GCTCTAAGTGTATGGACAATTTAGCC 60.018 42.308 11.23 0.00 40.87 3.93
2908 3104 6.538742 TGCTCTAAGTGTATGGACAATTTAGC 59.461 38.462 13.68 13.68 40.87 3.09
2909 3105 8.391106 GTTGCTCTAAGTGTATGGACAATTTAG 58.609 37.037 0.00 1.44 40.87 1.85
2910 3106 7.335924 GGTTGCTCTAAGTGTATGGACAATTTA 59.664 37.037 0.00 0.00 40.87 1.40
2911 3107 6.151144 GGTTGCTCTAAGTGTATGGACAATTT 59.849 38.462 0.00 0.00 40.87 1.82
2912 3108 5.648092 GGTTGCTCTAAGTGTATGGACAATT 59.352 40.000 0.00 0.00 45.37 2.32
2913 3109 5.186198 GGTTGCTCTAAGTGTATGGACAAT 58.814 41.667 0.00 0.00 37.31 2.71
2914 3110 4.041075 TGGTTGCTCTAAGTGTATGGACAA 59.959 41.667 0.00 0.00 37.31 3.18
2915 3111 3.580895 TGGTTGCTCTAAGTGTATGGACA 59.419 43.478 0.00 0.00 0.00 4.02
2916 3112 4.202245 TGGTTGCTCTAAGTGTATGGAC 57.798 45.455 0.00 0.00 0.00 4.02
2917 3113 4.469586 TCATGGTTGCTCTAAGTGTATGGA 59.530 41.667 0.00 0.00 0.00 3.41
2918 3114 4.769688 TCATGGTTGCTCTAAGTGTATGG 58.230 43.478 0.00 0.00 0.00 2.74
2919 3115 5.423015 ACTCATGGTTGCTCTAAGTGTATG 58.577 41.667 0.00 0.00 0.00 2.39
2920 3116 5.423610 AGACTCATGGTTGCTCTAAGTGTAT 59.576 40.000 0.00 0.00 0.00 2.29
2921 3117 4.772624 AGACTCATGGTTGCTCTAAGTGTA 59.227 41.667 0.00 0.00 0.00 2.90
2922 3118 3.580458 AGACTCATGGTTGCTCTAAGTGT 59.420 43.478 0.00 0.00 0.00 3.55
2923 3119 3.931468 CAGACTCATGGTTGCTCTAAGTG 59.069 47.826 0.00 0.00 0.00 3.16
2924 3120 3.580458 ACAGACTCATGGTTGCTCTAAGT 59.420 43.478 0.00 0.00 0.00 2.24
2925 3121 4.199432 ACAGACTCATGGTTGCTCTAAG 57.801 45.455 0.00 0.00 0.00 2.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.