Multiple sequence alignment - TraesCS3B01G102200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G102200 chr3B 100.000 4840 0 0 1 4840 68885363 68880524 0.000000e+00 8938.0
1 TraesCS3B01G102200 chr3A 94.923 1871 80 10 2114 3975 56143454 56141590 0.000000e+00 2915.0
2 TraesCS3B01G102200 chr3A 92.354 1334 72 14 3 1321 56145540 56144222 0.000000e+00 1871.0
3 TraesCS3B01G102200 chr3A 96.376 745 20 3 1266 2003 56144184 56143440 0.000000e+00 1219.0
4 TraesCS3B01G102200 chr3A 91.254 343 23 5 4436 4772 719614990 719615331 1.230000e-125 460.0
5 TraesCS3B01G102200 chr3A 89.859 355 29 4 4436 4785 180780989 180781341 2.660000e-122 449.0
6 TraesCS3B01G102200 chr3A 85.153 229 21 6 4226 4444 56141507 56141282 6.310000e-54 222.0
7 TraesCS3B01G102200 chr3A 91.667 72 6 0 4769 4840 56141142 56141071 3.080000e-17 100.0
8 TraesCS3B01G102200 chr3A 94.545 55 3 0 4057 4111 56141591 56141537 8.630000e-13 86.1
9 TraesCS3B01G102200 chr3D 91.735 1343 68 14 1 1320 43976267 43974945 0.000000e+00 1825.0
10 TraesCS3B01G102200 chr3D 95.671 1132 40 6 2114 3238 43974205 43973076 0.000000e+00 1810.0
11 TraesCS3B01G102200 chr3D 96.770 743 19 3 1266 2003 43974933 43974191 0.000000e+00 1234.0
12 TraesCS3B01G102200 chr3D 93.085 752 41 6 3226 3975 43973053 43972311 0.000000e+00 1090.0
13 TraesCS3B01G102200 chr3D 86.207 406 28 12 4057 4441 43972312 43971914 9.690000e-112 414.0
14 TraesCS3B01G102200 chr5B 87.548 522 46 14 2694 3203 249073518 249074032 1.940000e-163 586.0
15 TraesCS3B01G102200 chr5B 84.055 508 71 10 3314 3817 249074132 249074633 9.420000e-132 481.0
16 TraesCS3B01G102200 chr5B 84.541 414 31 13 1601 1987 249072211 249072618 3.540000e-101 379.0
17 TraesCS3B01G102200 chr5A 86.556 543 48 17 2693 3217 296303356 296302821 4.200000e-160 575.0
18 TraesCS3B01G102200 chr5A 84.416 539 69 14 3314 3848 296302737 296302210 2.580000e-142 516.0
19 TraesCS3B01G102200 chr5A 84.262 413 33 15 1601 1987 296304665 296304259 1.640000e-99 374.0
20 TraesCS3B01G102200 chr5A 81.250 480 63 20 999 1463 296305244 296304777 3.560000e-96 363.0
21 TraesCS3B01G102200 chr5D 85.311 531 54 17 2697 3217 223649562 223649046 1.190000e-145 527.0
22 TraesCS3B01G102200 chr5D 84.601 539 68 12 3314 3848 223648962 223648435 5.550000e-144 521.0
23 TraesCS3B01G102200 chr5D 84.096 415 31 17 1601 1987 223650964 223650557 7.650000e-98 368.0
24 TraesCS3B01G102200 chr5D 96.581 117 3 1 2003 2118 485826055 485825939 4.940000e-45 193.0
25 TraesCS3B01G102200 chr2D 92.814 334 23 1 4436 4769 538595571 538595239 2.620000e-132 483.0
26 TraesCS3B01G102200 chr2D 98.261 115 2 0 2003 2117 243656209 243656323 8.210000e-48 202.0
27 TraesCS3B01G102200 chr2D 95.000 120 5 1 2003 2122 382450460 382450342 2.300000e-43 187.0
28 TraesCS3B01G102200 chr7A 91.908 346 25 3 4436 4779 35179556 35179212 9.420000e-132 481.0
29 TraesCS3B01G102200 chr7A 100.000 107 0 0 2003 2109 516500121 516500227 1.060000e-46 198.0
30 TraesCS3B01G102200 chr6D 91.988 337 23 4 4436 4769 450351429 450351764 2.040000e-128 470.0
31 TraesCS3B01G102200 chr1D 91.117 349 28 3 4436 4781 96912338 96912686 2.040000e-128 470.0
32 TraesCS3B01G102200 chr1D 94.309 123 5 2 2003 2124 94050764 94050643 2.300000e-43 187.0
33 TraesCS3B01G102200 chr1D 91.729 133 7 4 2003 2133 258182336 258182206 1.070000e-41 182.0
34 TraesCS3B01G102200 chr4A 91.279 344 28 2 4436 4778 331337077 331336735 7.330000e-128 468.0
35 TraesCS3B01G102200 chr4A 90.435 345 31 2 4436 4779 313200960 313201303 2.050000e-123 453.0
36 TraesCS3B01G102200 chr4A 90.435 345 27 5 4438 4777 420163433 420163776 2.660000e-122 449.0
37 TraesCS3B01G102200 chr4B 90.000 170 14 1 3 172 87679084 87679250 2.930000e-52 217.0
38 TraesCS3B01G102200 chr4B 92.391 92 6 1 3971 4061 282239786 282239877 3.930000e-26 130.0
39 TraesCS3B01G102200 chr4B 86.486 111 13 2 3974 4082 179310361 179310471 2.370000e-23 121.0
40 TraesCS3B01G102200 chr2B 99.065 107 1 0 2003 2109 406878403 406878509 4.940000e-45 193.0
41 TraesCS3B01G102200 chr2B 93.407 91 4 2 3969 4058 478114465 478114376 3.040000e-27 134.0
42 TraesCS3B01G102200 chr2B 92.308 91 5 2 3971 4061 782178842 782178754 1.410000e-25 128.0
43 TraesCS3B01G102200 chr7B 95.763 118 4 1 2003 2120 304123101 304122985 6.390000e-44 189.0
44 TraesCS3B01G102200 chr7B 95.294 85 4 0 3974 4058 132357232 132357316 8.450000e-28 135.0
45 TraesCS3B01G102200 chr6A 95.041 121 5 1 2003 2123 146531304 146531185 6.390000e-44 189.0
46 TraesCS3B01G102200 chr1B 93.478 92 6 0 3972 4063 322104545 322104636 2.350000e-28 137.0
47 TraesCS3B01G102200 chr7D 92.553 94 4 3 3974 4066 252265194 252265285 1.090000e-26 132.0
48 TraesCS3B01G102200 chrUn 92.391 92 5 2 3972 4062 65119675 65119585 3.930000e-26 130.0
49 TraesCS3B01G102200 chr6B 92.391 92 6 1 3971 4061 270366133 270366042 3.930000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G102200 chr3B 68880524 68885363 4839 True 8938.00 8938 100.000000 1 4840 1 chr3B.!!$R1 4839
1 TraesCS3B01G102200 chr3A 56141071 56145540 4469 True 1068.85 2915 92.503000 3 4840 6 chr3A.!!$R1 4837
2 TraesCS3B01G102200 chr3D 43971914 43976267 4353 True 1274.60 1825 92.693600 1 4441 5 chr3D.!!$R1 4440
3 TraesCS3B01G102200 chr5B 249072211 249074633 2422 False 482.00 586 85.381333 1601 3817 3 chr5B.!!$F1 2216
4 TraesCS3B01G102200 chr5A 296302210 296305244 3034 True 457.00 575 84.121000 999 3848 4 chr5A.!!$R1 2849
5 TraesCS3B01G102200 chr5D 223648435 223650964 2529 True 472.00 527 84.669333 1601 3848 3 chr5D.!!$R2 2247

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
329 338 0.099259 TTCCGTGCGTAGATGGTACG 59.901 55.0 0.22 0.22 42.05 3.67 F
1280 1321 0.034863 AGAGTGACGAGGAGGAGGAC 60.035 60.0 0.00 0.00 0.00 3.85 F
2016 2219 0.107017 ACCACTGCTATCCATGTGCC 60.107 55.0 0.00 0.00 0.00 5.01 F
2017 2220 0.107066 CCACTGCTATCCATGTGCCA 60.107 55.0 0.00 0.00 0.00 4.92 F
2026 2229 0.697658 TCCATGTGCCAGAACCATGA 59.302 50.0 0.00 0.00 38.56 3.07 F
2069 2272 0.714180 TTCACCTCTAGCCTACCCCA 59.286 55.0 0.00 0.00 0.00 4.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1998 2201 0.107066 TGGCACATGGATAGCAGTGG 60.107 55.0 0.00 0.00 32.80 4.00 R
2101 2304 0.241749 GCATAGCAGCAGCAACAACA 59.758 50.0 3.17 0.00 45.49 3.33 R
2969 3608 0.390603 TTCCGCAAGTACATCCGGTG 60.391 55.0 14.82 1.37 41.38 4.94 R
3031 3670 0.618458 TGACTGGTGGCCCTCATAAC 59.382 55.0 0.00 0.00 0.00 1.89 R
3359 4041 0.995024 CTTCCACATCCTTCCCCTGT 59.005 55.0 0.00 0.00 0.00 4.00 R
4043 4731 0.108281 GCAACTACTTCCTCCGTCCC 60.108 60.0 0.00 0.00 0.00 4.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 1.679898 CGGAAGTGCCCTCTCCTTT 59.320 57.895 0.00 0.00 0.00 3.11
41 42 1.133216 TCTCCTTTCTCAGCATCGTCG 59.867 52.381 0.00 0.00 0.00 5.12
126 127 4.681978 GGTGCACCTCGGCGTTCT 62.682 66.667 29.12 0.00 36.28 3.01
248 257 2.100252 TGCACTAGTTCCGTATGTAGGC 59.900 50.000 0.00 0.00 0.00 3.93
278 287 2.723322 TGCTTGCTCATATGCCTTCT 57.277 45.000 0.00 0.00 0.00 2.85
329 338 0.099259 TTCCGTGCGTAGATGGTACG 59.901 55.000 0.22 0.22 42.05 3.67
342 351 6.315642 CGTAGATGGTACGTACATAGATGGAT 59.684 42.308 26.02 5.47 36.31 3.41
343 352 6.516739 AGATGGTACGTACATAGATGGATG 57.483 41.667 26.02 0.00 33.75 3.51
344 353 5.419155 AGATGGTACGTACATAGATGGATGG 59.581 44.000 26.02 0.00 31.74 3.51
345 354 3.257375 TGGTACGTACATAGATGGATGGC 59.743 47.826 26.02 5.55 31.74 4.40
346 355 2.724977 ACGTACATAGATGGATGGCG 57.275 50.000 0.00 0.00 36.25 5.69
347 356 1.336887 ACGTACATAGATGGATGGCGC 60.337 52.381 0.00 0.00 34.70 6.53
348 357 1.067565 CGTACATAGATGGATGGCGCT 60.068 52.381 7.64 0.00 0.00 5.92
349 358 2.610479 CGTACATAGATGGATGGCGCTT 60.610 50.000 7.64 0.00 0.00 4.68
350 359 1.888215 ACATAGATGGATGGCGCTTG 58.112 50.000 7.64 0.00 0.00 4.01
351 360 0.520404 CATAGATGGATGGCGCTTGC 59.480 55.000 7.64 0.75 38.11 4.01
352 361 0.109153 ATAGATGGATGGCGCTTGCA 59.891 50.000 7.64 7.52 41.71 4.08
353 362 0.533531 TAGATGGATGGCGCTTGCAG 60.534 55.000 7.64 0.00 41.71 4.41
447 470 0.248843 GTGGCAAGTGAGGAGAGAGG 59.751 60.000 0.00 0.00 0.00 3.69
456 479 0.537653 GAGGAGAGAGGGAAAACCCG 59.462 60.000 0.00 0.00 41.63 5.28
467 490 0.600782 GAAAACCCGCCTACACGTGA 60.601 55.000 25.01 4.97 0.00 4.35
476 499 0.863144 CCTACACGTGACCGGTTTTG 59.137 55.000 25.01 6.33 38.78 2.44
477 500 1.574134 CTACACGTGACCGGTTTTGT 58.426 50.000 25.01 12.27 38.78 2.83
479 502 0.391395 ACACGTGACCGGTTTTGTCA 60.391 50.000 25.01 0.00 40.28 3.58
505 528 3.250040 ACTCTGGTTTTGGACGAAATTCG 59.750 43.478 14.35 14.35 46.93 3.34
598 621 2.433239 ACTTGAGGGACGTACTGTTTGT 59.567 45.455 0.00 0.00 0.00 2.83
605 628 1.525619 GACGTACTGTTTGTGCCACTC 59.474 52.381 0.00 0.00 0.00 3.51
740 765 3.366679 CCTGTCCTGAAACATGTGATTGC 60.367 47.826 0.00 0.00 0.00 3.56
807 832 3.120060 CGCTGAACCTGAATTTCTGGAAG 60.120 47.826 24.29 18.46 37.65 3.46
810 835 4.473444 TGAACCTGAATTTCTGGAAGCTT 58.527 39.130 24.29 0.00 37.65 3.74
812 837 5.363580 TGAACCTGAATTTCTGGAAGCTTTT 59.636 36.000 24.29 10.25 37.65 2.27
815 840 5.363580 ACCTGAATTTCTGGAAGCTTTTCAA 59.636 36.000 24.29 0.00 37.65 2.69
818 843 7.443272 CCTGAATTTCTGGAAGCTTTTCAATTT 59.557 33.333 15.27 0.00 37.65 1.82
819 844 8.735692 TGAATTTCTGGAAGCTTTTCAATTTT 57.264 26.923 0.00 0.00 0.00 1.82
866 891 9.257651 CCGATTTTCTAGATTAACCGAAATACT 57.742 33.333 0.00 0.00 0.00 2.12
876 901 3.034721 ACCGAAATACTGACTTTGCGA 57.965 42.857 0.00 0.00 0.00 5.10
956 981 9.674068 AACAAAACCAAAATGTACTAACCAAAT 57.326 25.926 0.00 0.00 0.00 2.32
1011 1036 1.269569 CGATACAAGATGGCGCCACTA 60.270 52.381 35.50 16.10 0.00 2.74
1164 1195 1.504900 CGATGACGACGTCCAGGAA 59.495 57.895 24.33 6.48 42.66 3.36
1248 1283 3.262915 AGCTGTTTTGTGCCTATCTCTCT 59.737 43.478 0.00 0.00 0.00 3.10
1249 1284 3.620821 GCTGTTTTGTGCCTATCTCTCTC 59.379 47.826 0.00 0.00 0.00 3.20
1250 1285 4.622695 GCTGTTTTGTGCCTATCTCTCTCT 60.623 45.833 0.00 0.00 0.00 3.10
1251 1286 5.078411 TGTTTTGTGCCTATCTCTCTCTC 57.922 43.478 0.00 0.00 0.00 3.20
1280 1321 0.034863 AGAGTGACGAGGAGGAGGAC 60.035 60.000 0.00 0.00 0.00 3.85
1529 1695 1.376466 GTCTCAAGAGGCCAGGCAA 59.624 57.895 15.19 0.00 0.00 4.52
1657 1835 2.648059 ACCTCTACATCCAATTGCTGC 58.352 47.619 0.00 0.00 0.00 5.25
1998 2201 4.685169 TTTTGCTTCAGTGCTATGCTAC 57.315 40.909 0.00 0.00 0.00 3.58
1999 2202 2.315925 TGCTTCAGTGCTATGCTACC 57.684 50.000 0.00 0.00 0.00 3.18
2000 2203 1.554617 TGCTTCAGTGCTATGCTACCA 59.445 47.619 0.00 0.00 0.00 3.25
2001 2204 1.936547 GCTTCAGTGCTATGCTACCAC 59.063 52.381 0.00 0.00 0.00 4.16
2002 2205 2.419297 GCTTCAGTGCTATGCTACCACT 60.419 50.000 0.00 0.00 40.22 4.00
2004 2207 1.293924 CAGTGCTATGCTACCACTGC 58.706 55.000 7.02 0.00 46.58 4.40
2005 2208 1.134580 CAGTGCTATGCTACCACTGCT 60.135 52.381 7.02 0.00 46.58 4.24
2006 2209 2.101415 CAGTGCTATGCTACCACTGCTA 59.899 50.000 7.02 0.00 46.58 3.49
2007 2210 2.968574 AGTGCTATGCTACCACTGCTAT 59.031 45.455 0.00 0.00 38.32 2.97
2008 2211 3.006323 AGTGCTATGCTACCACTGCTATC 59.994 47.826 0.00 0.00 38.32 2.08
2009 2212 2.300152 TGCTATGCTACCACTGCTATCC 59.700 50.000 0.00 0.00 0.00 2.59
2010 2213 2.300152 GCTATGCTACCACTGCTATCCA 59.700 50.000 0.00 0.00 0.00 3.41
2011 2214 3.055530 GCTATGCTACCACTGCTATCCAT 60.056 47.826 0.00 0.00 0.00 3.41
2012 2215 2.916702 TGCTACCACTGCTATCCATG 57.083 50.000 0.00 0.00 0.00 3.66
2013 2216 2.118679 TGCTACCACTGCTATCCATGT 58.881 47.619 0.00 0.00 0.00 3.21
2014 2217 2.158914 TGCTACCACTGCTATCCATGTG 60.159 50.000 0.00 0.00 0.00 3.21
2015 2218 2.487934 CTACCACTGCTATCCATGTGC 58.512 52.381 0.00 0.00 0.00 4.57
2016 2219 0.107017 ACCACTGCTATCCATGTGCC 60.107 55.000 0.00 0.00 0.00 5.01
2017 2220 0.107066 CCACTGCTATCCATGTGCCA 60.107 55.000 0.00 0.00 0.00 4.92
2018 2221 1.306148 CACTGCTATCCATGTGCCAG 58.694 55.000 0.00 0.00 0.00 4.85
2019 2222 1.134310 CACTGCTATCCATGTGCCAGA 60.134 52.381 0.00 0.00 0.00 3.86
2020 2223 1.561076 ACTGCTATCCATGTGCCAGAA 59.439 47.619 0.00 0.00 0.00 3.02
2021 2224 1.945394 CTGCTATCCATGTGCCAGAAC 59.055 52.381 0.00 0.00 0.00 3.01
2022 2225 1.312815 GCTATCCATGTGCCAGAACC 58.687 55.000 0.00 0.00 0.00 3.62
2023 2226 1.408683 GCTATCCATGTGCCAGAACCA 60.409 52.381 0.00 0.00 0.00 3.67
2024 2227 2.750807 GCTATCCATGTGCCAGAACCAT 60.751 50.000 0.00 0.00 0.00 3.55
2025 2228 1.771565 ATCCATGTGCCAGAACCATG 58.228 50.000 0.00 0.00 36.56 3.66
2026 2229 0.697658 TCCATGTGCCAGAACCATGA 59.302 50.000 0.00 0.00 38.56 3.07
2027 2230 1.100510 CCATGTGCCAGAACCATGAG 58.899 55.000 0.00 0.00 38.56 2.90
2028 2231 1.615116 CCATGTGCCAGAACCATGAGT 60.615 52.381 0.00 0.00 38.56 3.41
2029 2232 2.165167 CATGTGCCAGAACCATGAGTT 58.835 47.619 0.00 0.00 43.07 3.01
2030 2233 1.608055 TGTGCCAGAACCATGAGTTG 58.392 50.000 0.00 0.00 39.40 3.16
2040 2243 2.680312 CCATGAGTTGGTCACGAGAT 57.320 50.000 0.00 0.00 40.99 2.75
2041 2244 2.544685 CCATGAGTTGGTCACGAGATC 58.455 52.381 0.00 0.00 40.99 2.75
2042 2245 2.167281 CCATGAGTTGGTCACGAGATCT 59.833 50.000 0.00 0.00 40.99 2.75
2043 2246 3.368843 CCATGAGTTGGTCACGAGATCTT 60.369 47.826 0.00 0.00 40.99 2.40
2044 2247 4.142160 CCATGAGTTGGTCACGAGATCTTA 60.142 45.833 0.00 0.00 40.99 2.10
2045 2248 5.452496 CCATGAGTTGGTCACGAGATCTTAT 60.452 44.000 0.00 0.00 40.99 1.73
2046 2249 4.998788 TGAGTTGGTCACGAGATCTTATG 58.001 43.478 0.00 0.00 0.00 1.90
2047 2250 4.142160 TGAGTTGGTCACGAGATCTTATGG 60.142 45.833 0.00 0.00 0.00 2.74
2048 2251 3.133003 AGTTGGTCACGAGATCTTATGGG 59.867 47.826 0.00 0.00 0.00 4.00
2049 2252 2.747177 TGGTCACGAGATCTTATGGGT 58.253 47.619 0.00 0.00 0.00 4.51
2050 2253 3.104512 TGGTCACGAGATCTTATGGGTT 58.895 45.455 0.00 0.00 0.00 4.11
2051 2254 3.517901 TGGTCACGAGATCTTATGGGTTT 59.482 43.478 0.00 0.00 0.00 3.27
2052 2255 4.120589 GGTCACGAGATCTTATGGGTTTC 58.879 47.826 0.00 0.00 0.00 2.78
2053 2256 4.382685 GGTCACGAGATCTTATGGGTTTCA 60.383 45.833 0.00 0.00 0.00 2.69
2054 2257 4.567159 GTCACGAGATCTTATGGGTTTCAC 59.433 45.833 0.00 0.00 0.00 3.18
2055 2258 3.871594 CACGAGATCTTATGGGTTTCACC 59.128 47.826 0.00 0.00 37.60 4.02
2056 2259 3.775316 ACGAGATCTTATGGGTTTCACCT 59.225 43.478 0.00 0.00 38.64 4.00
2057 2260 4.141914 ACGAGATCTTATGGGTTTCACCTC 60.142 45.833 0.00 0.00 38.64 3.85
2058 2261 4.100189 CGAGATCTTATGGGTTTCACCTCT 59.900 45.833 0.00 0.00 38.64 3.69
2059 2262 5.302059 CGAGATCTTATGGGTTTCACCTCTA 59.698 44.000 0.00 0.00 38.64 2.43
2060 2263 6.515862 CGAGATCTTATGGGTTTCACCTCTAG 60.516 46.154 0.00 0.00 38.64 2.43
2061 2264 4.755266 TCTTATGGGTTTCACCTCTAGC 57.245 45.455 0.00 0.00 38.64 3.42
2062 2265 3.454812 TCTTATGGGTTTCACCTCTAGCC 59.545 47.826 0.00 0.00 38.64 3.93
2063 2266 1.972588 ATGGGTTTCACCTCTAGCCT 58.027 50.000 0.00 0.00 38.64 4.58
2064 2267 2.634639 TGGGTTTCACCTCTAGCCTA 57.365 50.000 0.00 0.00 38.64 3.93
2065 2268 2.185387 TGGGTTTCACCTCTAGCCTAC 58.815 52.381 0.00 0.00 38.64 3.18
2066 2269 1.485480 GGGTTTCACCTCTAGCCTACC 59.515 57.143 0.00 0.00 38.64 3.18
2067 2270 1.485480 GGTTTCACCTCTAGCCTACCC 59.515 57.143 0.00 0.00 34.73 3.69
2068 2271 1.485480 GTTTCACCTCTAGCCTACCCC 59.515 57.143 0.00 0.00 0.00 4.95
2069 2272 0.714180 TTCACCTCTAGCCTACCCCA 59.286 55.000 0.00 0.00 0.00 4.96
2070 2273 0.714180 TCACCTCTAGCCTACCCCAA 59.286 55.000 0.00 0.00 0.00 4.12
2071 2274 0.831307 CACCTCTAGCCTACCCCAAC 59.169 60.000 0.00 0.00 0.00 3.77
2072 2275 0.717196 ACCTCTAGCCTACCCCAACT 59.283 55.000 0.00 0.00 0.00 3.16
2073 2276 1.080666 ACCTCTAGCCTACCCCAACTT 59.919 52.381 0.00 0.00 0.00 2.66
2074 2277 1.486726 CCTCTAGCCTACCCCAACTTG 59.513 57.143 0.00 0.00 0.00 3.16
2075 2278 2.188817 CTCTAGCCTACCCCAACTTGT 58.811 52.381 0.00 0.00 0.00 3.16
2076 2279 2.572104 CTCTAGCCTACCCCAACTTGTT 59.428 50.000 0.00 0.00 0.00 2.83
2077 2280 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
2078 2281 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
2089 2292 3.977427 CAACTTGTTTGGGACTAAAGGC 58.023 45.455 0.00 0.00 0.00 4.35
2090 2293 3.595190 ACTTGTTTGGGACTAAAGGCT 57.405 42.857 0.00 0.00 0.00 4.58
2091 2294 3.910989 ACTTGTTTGGGACTAAAGGCTT 58.089 40.909 0.00 0.00 0.00 4.35
2092 2295 4.286707 ACTTGTTTGGGACTAAAGGCTTT 58.713 39.130 17.76 17.76 0.00 3.51
2093 2296 4.099419 ACTTGTTTGGGACTAAAGGCTTTG 59.901 41.667 22.32 13.97 0.00 2.77
2094 2297 3.637769 TGTTTGGGACTAAAGGCTTTGT 58.362 40.909 22.32 16.86 0.00 2.83
2095 2298 4.027437 TGTTTGGGACTAAAGGCTTTGTT 58.973 39.130 22.32 8.73 0.00 2.83
2096 2299 4.142049 TGTTTGGGACTAAAGGCTTTGTTG 60.142 41.667 22.32 13.85 0.00 3.33
2097 2300 3.306472 TGGGACTAAAGGCTTTGTTGT 57.694 42.857 22.32 16.69 0.00 3.32
2098 2301 3.637769 TGGGACTAAAGGCTTTGTTGTT 58.362 40.909 22.32 1.84 0.00 2.83
2099 2302 3.383185 TGGGACTAAAGGCTTTGTTGTTG 59.617 43.478 22.32 7.79 0.00 3.33
2100 2303 3.383505 GGGACTAAAGGCTTTGTTGTTGT 59.616 43.478 22.32 10.58 0.00 3.32
2101 2304 4.142026 GGGACTAAAGGCTTTGTTGTTGTT 60.142 41.667 22.32 0.00 0.00 2.83
2102 2305 4.803613 GGACTAAAGGCTTTGTTGTTGTTG 59.196 41.667 22.32 0.00 0.00 3.33
2103 2306 5.400066 ACTAAAGGCTTTGTTGTTGTTGT 57.600 34.783 22.32 0.00 0.00 3.32
2104 2307 5.789521 ACTAAAGGCTTTGTTGTTGTTGTT 58.210 33.333 22.32 0.00 0.00 2.83
2105 2308 5.637387 ACTAAAGGCTTTGTTGTTGTTGTTG 59.363 36.000 22.32 0.00 0.00 3.33
2106 2309 3.676291 AGGCTTTGTTGTTGTTGTTGT 57.324 38.095 0.00 0.00 0.00 3.32
2107 2310 4.001618 AGGCTTTGTTGTTGTTGTTGTT 57.998 36.364 0.00 0.00 0.00 2.83
2108 2311 3.745458 AGGCTTTGTTGTTGTTGTTGTTG 59.255 39.130 0.00 0.00 0.00 3.33
2109 2312 3.478063 GCTTTGTTGTTGTTGTTGTTGC 58.522 40.909 0.00 0.00 0.00 4.17
2110 2313 3.186205 GCTTTGTTGTTGTTGTTGTTGCT 59.814 39.130 0.00 0.00 0.00 3.91
2111 2314 4.700332 CTTTGTTGTTGTTGTTGTTGCTG 58.300 39.130 0.00 0.00 0.00 4.41
2112 2315 2.064762 TGTTGTTGTTGTTGTTGCTGC 58.935 42.857 0.00 0.00 0.00 5.25
2173 2376 4.155826 TCTTACTGTGCGCAATATGCTTTT 59.844 37.500 14.00 0.00 42.25 2.27
2174 2377 3.302365 ACTGTGCGCAATATGCTTTTT 57.698 38.095 14.00 0.00 42.25 1.94
2207 2410 3.519510 TGTAGGCTTTACTGGAGCAGAAT 59.480 43.478 0.00 0.00 41.89 2.40
2261 2464 5.055812 GCTATCCAGTCTTTCTCATTCTGG 58.944 45.833 0.00 0.00 44.69 3.86
2384 2587 3.123050 CAAGGTAACCTTTTGCAGCAAC 58.877 45.455 7.54 0.00 41.69 4.17
2468 2671 5.736358 GCAGAAGATCTTTTGTTAATCAGCG 59.264 40.000 22.85 0.00 0.00 5.18
2503 2707 4.010349 GCCCTTGTATGCTTACCATATCC 58.990 47.826 7.25 0.00 38.60 2.59
2571 2804 4.635699 TTAAACTCTTCCCTGGTCCTTC 57.364 45.455 0.00 0.00 0.00 3.46
2763 3393 3.733443 AAATGGCAGAGGAAAACACAC 57.267 42.857 0.00 0.00 0.00 3.82
2969 3608 2.172293 AGAGACCCAAGCAGGATGATTC 59.828 50.000 0.00 0.00 44.15 2.52
3031 3670 5.586243 CGGGGAGGTATTTTATATGCATCTG 59.414 44.000 0.19 0.00 0.00 2.90
3203 3848 6.456181 GCCTGTCTCTCATTTTGTTCTATTCG 60.456 42.308 0.00 0.00 0.00 3.34
3219 3866 9.791820 TGTTCTATTCGAATTTCGTTATGTAGA 57.208 29.630 17.19 14.42 41.35 2.59
3232 3914 5.292834 TCGTTATGTAGACCAGTTAGACTCG 59.707 44.000 0.00 0.00 0.00 4.18
3241 3923 5.069501 ACCAGTTAGACTCGGTTATCAAC 57.930 43.478 0.00 0.00 29.45 3.18
3359 4041 1.341482 TGCTCACCCCTTGTTTCAACA 60.341 47.619 0.00 0.00 37.08 3.33
3451 4133 5.419155 AGGAGTTTCTCGAGTCATGTGATAA 59.581 40.000 13.13 0.00 0.00 1.75
3486 4168 7.825681 TGGTTAGTTCATATCCAACAATTGTG 58.174 34.615 12.82 6.46 31.50 3.33
3497 4179 3.165890 CAACAATTGTGTATCTGCGCTG 58.834 45.455 12.82 8.88 36.80 5.18
3498 4180 2.426522 ACAATTGTGTATCTGCGCTGT 58.573 42.857 11.07 0.00 35.72 4.40
3650 4336 9.089601 GCAGAAAGATAAGGTAGAGTTACTTTC 57.910 37.037 0.00 0.00 40.85 2.62
3654 4340 8.814038 AAGATAAGGTAGAGTTACTTTCGGTA 57.186 34.615 0.00 0.00 32.16 4.02
3672 4359 2.691011 GGTACAGTTGGTTTTCCTTGCA 59.309 45.455 0.00 0.00 41.38 4.08
3694 4381 5.925969 GCAGGCAATTGTGTATTAACTTGTT 59.074 36.000 7.40 0.00 0.00 2.83
3695 4382 6.423604 GCAGGCAATTGTGTATTAACTTGTTT 59.576 34.615 7.40 0.00 0.00 2.83
3696 4383 7.596995 GCAGGCAATTGTGTATTAACTTGTTTA 59.403 33.333 7.40 0.00 0.00 2.01
3719 4406 6.743575 ATTATGTGAGTTTTCAGGTACAGC 57.256 37.500 0.00 0.00 32.98 4.40
3877 4564 9.170584 GTCTGAAATGTTGTTAAAGCTAGTTTC 57.829 33.333 0.00 0.00 0.00 2.78
3878 4565 8.898761 TCTGAAATGTTGTTAAAGCTAGTTTCA 58.101 29.630 0.00 0.00 33.57 2.69
3904 4592 4.878971 TGATGGGTGGTAATATGTGAAACG 59.121 41.667 0.00 0.00 42.39 3.60
3932 4620 6.713450 AGTAATACCACAAAACTTGTACCCAG 59.287 38.462 0.00 0.00 43.23 4.45
3976 4664 8.255111 TGAGGATGAGTGTCATGAATATTACT 57.745 34.615 0.00 0.00 37.20 2.24
3977 4665 8.363390 TGAGGATGAGTGTCATGAATATTACTC 58.637 37.037 0.00 7.55 37.20 2.59
3978 4666 7.675062 AGGATGAGTGTCATGAATATTACTCC 58.325 38.462 16.20 10.18 37.20 3.85
3979 4667 6.876257 GGATGAGTGTCATGAATATTACTCCC 59.124 42.308 16.20 10.79 37.20 4.30
3980 4668 7.256475 GGATGAGTGTCATGAATATTACTCCCT 60.256 40.741 16.20 8.63 37.20 4.20
3981 4669 7.055667 TGAGTGTCATGAATATTACTCCCTC 57.944 40.000 16.20 3.39 35.02 4.30
3982 4670 6.042093 TGAGTGTCATGAATATTACTCCCTCC 59.958 42.308 16.20 0.00 35.02 4.30
3983 4671 5.011125 AGTGTCATGAATATTACTCCCTCCG 59.989 44.000 0.00 0.00 0.00 4.63
3984 4672 4.899457 TGTCATGAATATTACTCCCTCCGT 59.101 41.667 0.00 0.00 0.00 4.69
3985 4673 5.010719 TGTCATGAATATTACTCCCTCCGTC 59.989 44.000 0.00 0.00 0.00 4.79
3986 4674 4.527038 TCATGAATATTACTCCCTCCGTCC 59.473 45.833 0.00 0.00 0.00 4.79
3987 4675 3.236896 TGAATATTACTCCCTCCGTCCC 58.763 50.000 0.00 0.00 0.00 4.46
3988 4676 3.236896 GAATATTACTCCCTCCGTCCCA 58.763 50.000 0.00 0.00 0.00 4.37
3989 4677 3.562108 ATATTACTCCCTCCGTCCCAT 57.438 47.619 0.00 0.00 0.00 4.00
3990 4678 4.687262 ATATTACTCCCTCCGTCCCATA 57.313 45.455 0.00 0.00 0.00 2.74
3991 4679 2.852714 TTACTCCCTCCGTCCCATAA 57.147 50.000 0.00 0.00 0.00 1.90
3992 4680 3.339713 TTACTCCCTCCGTCCCATAAT 57.660 47.619 0.00 0.00 0.00 1.28
3993 4681 4.474303 TTACTCCCTCCGTCCCATAATA 57.526 45.455 0.00 0.00 0.00 0.98
3994 4682 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
3995 4683 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
3996 4684 4.611367 ACTCCCTCCGTCCCATAATATAG 58.389 47.826 0.00 0.00 0.00 1.31
3997 4685 3.961408 CTCCCTCCGTCCCATAATATAGG 59.039 52.174 0.00 0.00 0.00 2.57
3998 4686 3.599240 TCCCTCCGTCCCATAATATAGGA 59.401 47.826 0.00 0.00 0.00 2.94
3999 4687 3.705072 CCCTCCGTCCCATAATATAGGAC 59.295 52.174 7.65 7.65 45.49 3.85
4007 4695 6.164176 GTCCCATAATATAGGACGTTTCTGG 58.836 44.000 2.27 0.00 40.65 3.86
4008 4696 6.014840 GTCCCATAATATAGGACGTTTCTGGA 60.015 42.308 2.27 0.00 40.65 3.86
4009 4697 6.014840 TCCCATAATATAGGACGTTTCTGGAC 60.015 42.308 0.00 0.00 0.00 4.02
4010 4698 6.239487 CCCATAATATAGGACGTTTCTGGACA 60.239 42.308 0.00 0.00 0.00 4.02
4011 4699 6.645415 CCATAATATAGGACGTTTCTGGACAC 59.355 42.308 0.00 0.00 0.00 3.67
4012 4700 5.934402 AATATAGGACGTTTCTGGACACT 57.066 39.130 0.00 0.00 0.00 3.55
4013 4701 8.573885 CATAATATAGGACGTTTCTGGACACTA 58.426 37.037 0.00 0.00 0.00 2.74
4014 4702 7.598759 AATATAGGACGTTTCTGGACACTAT 57.401 36.000 0.00 0.00 0.00 2.12
4015 4703 3.594603 AGGACGTTTCTGGACACTATG 57.405 47.619 0.00 0.00 0.00 2.23
4016 4704 2.000447 GGACGTTTCTGGACACTATGC 59.000 52.381 0.00 0.00 0.00 3.14
4017 4705 2.353803 GGACGTTTCTGGACACTATGCT 60.354 50.000 0.00 0.00 0.00 3.79
4018 4706 3.119245 GGACGTTTCTGGACACTATGCTA 60.119 47.826 0.00 0.00 0.00 3.49
4019 4707 4.106197 GACGTTTCTGGACACTATGCTAG 58.894 47.826 0.00 0.00 0.00 3.42
4020 4708 3.510360 ACGTTTCTGGACACTATGCTAGT 59.490 43.478 0.00 0.00 40.28 2.57
4050 4738 3.720949 CGTCTTACATTATGGGACGGA 57.279 47.619 20.50 2.30 43.69 4.69
4051 4739 3.639538 CGTCTTACATTATGGGACGGAG 58.360 50.000 20.50 2.74 43.69 4.63
4052 4740 3.552273 CGTCTTACATTATGGGACGGAGG 60.552 52.174 20.50 5.87 43.69 4.30
4053 4741 3.640029 GTCTTACATTATGGGACGGAGGA 59.360 47.826 0.00 0.00 0.00 3.71
4054 4742 4.100498 GTCTTACATTATGGGACGGAGGAA 59.900 45.833 0.00 0.00 0.00 3.36
4055 4743 4.344102 TCTTACATTATGGGACGGAGGAAG 59.656 45.833 0.00 0.00 0.00 3.46
4056 4744 2.478292 ACATTATGGGACGGAGGAAGT 58.522 47.619 0.00 0.00 0.00 3.01
4057 4745 3.649843 ACATTATGGGACGGAGGAAGTA 58.350 45.455 0.00 0.00 0.00 2.24
4150 4838 5.934625 AGAATTGTCGCTGTATTCTTCAACT 59.065 36.000 0.00 0.00 35.64 3.16
4152 4840 3.990092 TGTCGCTGTATTCTTCAACTGT 58.010 40.909 0.00 0.00 0.00 3.55
4163 4851 7.819415 TGTATTCTTCAACTGTGGACTATGAAG 59.181 37.037 10.09 10.09 45.18 3.02
4164 4852 4.569943 TCTTCAACTGTGGACTATGAAGC 58.430 43.478 11.09 0.00 44.08 3.86
4172 4860 4.072131 TGTGGACTATGAAGCCAAGTTTC 58.928 43.478 0.00 0.00 32.84 2.78
4178 4866 6.642540 GGACTATGAAGCCAAGTTTCTTTTTG 59.357 38.462 0.00 0.00 0.00 2.44
4179 4867 5.985530 ACTATGAAGCCAAGTTTCTTTTTGC 59.014 36.000 0.00 0.00 0.00 3.68
4180 4868 3.530535 TGAAGCCAAGTTTCTTTTTGCC 58.469 40.909 0.00 0.00 0.00 4.52
4181 4869 2.620251 AGCCAAGTTTCTTTTTGCCC 57.380 45.000 0.00 0.00 0.00 5.36
4182 4870 1.140852 AGCCAAGTTTCTTTTTGCCCC 59.859 47.619 0.00 0.00 0.00 5.80
4186 4883 4.269183 CCAAGTTTCTTTTTGCCCCTTTT 58.731 39.130 0.00 0.00 0.00 2.27
4223 4920 2.223665 GGAAGCAAGGTCATAGCATTGC 60.224 50.000 0.00 0.00 46.50 3.56
4244 4942 5.446031 GCTTCTGCAAAGCAATAAACATC 57.554 39.130 21.23 0.00 42.56 3.06
4319 5018 5.009631 ACAAGTATAGCTTTGATGGTGCAA 58.990 37.500 2.92 0.00 34.69 4.08
4327 5026 3.611057 GCTTTGATGGTGCAAGTCTCTTG 60.611 47.826 5.28 5.28 0.00 3.02
4372 5071 9.827198 ACATAACAACATCATGGGGATTATTAT 57.173 29.630 0.00 0.00 32.57 1.28
4458 5167 6.627690 AGAAAACATCGATAACTACACGTG 57.372 37.500 15.48 15.48 0.00 4.49
4461 5170 4.041740 ACATCGATAACTACACGTGCAT 57.958 40.909 17.22 0.00 0.00 3.96
4462 5171 5.177725 ACATCGATAACTACACGTGCATA 57.822 39.130 17.22 4.04 0.00 3.14
4463 5172 4.974275 ACATCGATAACTACACGTGCATAC 59.026 41.667 17.22 0.16 0.00 2.39
4466 5175 3.973135 CGATAACTACACGTGCATACCTC 59.027 47.826 17.22 5.60 0.00 3.85
4467 5176 4.261072 CGATAACTACACGTGCATACCTCT 60.261 45.833 17.22 0.00 0.00 3.69
4468 5177 2.941453 ACTACACGTGCATACCTCTG 57.059 50.000 17.22 0.00 0.00 3.35
4469 5178 2.443416 ACTACACGTGCATACCTCTGA 58.557 47.619 17.22 0.00 0.00 3.27
4470 5179 2.823747 ACTACACGTGCATACCTCTGAA 59.176 45.455 17.22 0.00 0.00 3.02
4471 5180 2.831685 ACACGTGCATACCTCTGAAA 57.168 45.000 17.22 0.00 0.00 2.69
4473 5182 3.472652 ACACGTGCATACCTCTGAAAAA 58.527 40.909 17.22 0.00 0.00 1.94
4474 5183 4.072131 ACACGTGCATACCTCTGAAAAAT 58.928 39.130 17.22 0.00 0.00 1.82
4475 5184 4.083324 ACACGTGCATACCTCTGAAAAATG 60.083 41.667 17.22 0.00 0.00 2.32
4476 5185 4.072131 ACGTGCATACCTCTGAAAAATGT 58.928 39.130 0.00 0.00 0.00 2.71
4477 5186 4.154195 ACGTGCATACCTCTGAAAAATGTC 59.846 41.667 0.00 0.00 0.00 3.06
4478 5187 4.651994 GTGCATACCTCTGAAAAATGTCG 58.348 43.478 0.00 0.00 0.00 4.35
4479 5188 3.126858 TGCATACCTCTGAAAAATGTCGC 59.873 43.478 0.00 0.00 0.00 5.19
4481 5190 4.379394 GCATACCTCTGAAAAATGTCGCAA 60.379 41.667 0.00 0.00 0.00 4.85
4482 5191 3.904136 ACCTCTGAAAAATGTCGCAAG 57.096 42.857 0.00 0.00 0.00 4.01
4499 5208 3.000773 CGCAAGAGAAAACAACAGTTTGC 60.001 43.478 0.00 0.00 43.02 3.68
4505 5214 4.601019 AGAAAACAACAGTTTGCTCATCG 58.399 39.130 0.00 0.00 36.60 3.84
4506 5215 2.405892 AACAACAGTTTGCTCATCGC 57.594 45.000 0.00 0.00 36.00 4.58
4507 5216 0.235665 ACAACAGTTTGCTCATCGCG 59.764 50.000 0.00 0.00 43.27 5.87
4508 5217 0.512518 CAACAGTTTGCTCATCGCGA 59.487 50.000 13.09 13.09 43.27 5.87
4509 5218 0.792640 AACAGTTTGCTCATCGCGAG 59.207 50.000 16.66 7.11 45.37 5.03
4510 5219 0.038251 ACAGTTTGCTCATCGCGAGA 60.038 50.000 16.66 11.33 45.45 4.04
4511 5220 0.644331 CAGTTTGCTCATCGCGAGAG 59.356 55.000 22.99 22.99 45.45 3.20
4512 5221 0.244994 AGTTTGCTCATCGCGAGAGT 59.755 50.000 25.72 6.21 45.45 3.24
4513 5222 0.368227 GTTTGCTCATCGCGAGAGTG 59.632 55.000 25.72 16.68 45.45 3.51
4522 5231 2.647784 CGCGAGAGTGAGAGAAAGC 58.352 57.895 0.00 0.00 46.66 3.51
4523 5232 1.131037 CGCGAGAGTGAGAGAAAGCG 61.131 60.000 0.00 0.00 46.66 4.68
4524 5233 0.169230 GCGAGAGTGAGAGAAAGCGA 59.831 55.000 0.00 0.00 0.00 4.93
4525 5234 1.793714 GCGAGAGTGAGAGAAAGCGAG 60.794 57.143 0.00 0.00 0.00 5.03
4527 5236 0.170116 AGAGTGAGAGAAAGCGAGCG 59.830 55.000 0.00 0.00 0.00 5.03
4529 5238 0.170116 AGTGAGAGAAAGCGAGCGAG 59.830 55.000 0.00 0.00 0.00 5.03
4530 5239 0.169230 GTGAGAGAAAGCGAGCGAGA 59.831 55.000 0.00 0.00 0.00 4.04
4531 5240 0.449786 TGAGAGAAAGCGAGCGAGAG 59.550 55.000 0.00 0.00 0.00 3.20
4532 5241 0.730265 GAGAGAAAGCGAGCGAGAGA 59.270 55.000 0.00 0.00 0.00 3.10
4533 5242 0.732571 AGAGAAAGCGAGCGAGAGAG 59.267 55.000 0.00 0.00 0.00 3.20
4535 5244 1.226831 GAAAGCGAGCGAGAGAGGG 60.227 63.158 0.00 0.00 0.00 4.30
4536 5245 2.621371 GAAAGCGAGCGAGAGAGGGG 62.621 65.000 0.00 0.00 0.00 4.79
4551 5260 2.835895 GGGGGAGAGAGAGACGCC 60.836 72.222 0.00 0.00 36.19 5.68
4552 5261 2.277404 GGGGAGAGAGAGACGCCT 59.723 66.667 0.00 0.00 34.52 5.52
4553 5262 1.380650 GGGGAGAGAGAGACGCCTT 60.381 63.158 0.00 0.00 34.52 4.35
4555 5264 1.314730 GGGAGAGAGAGACGCCTTAG 58.685 60.000 0.00 0.00 0.00 2.18
4556 5265 1.134037 GGGAGAGAGAGACGCCTTAGA 60.134 57.143 0.00 0.00 0.00 2.10
4558 5267 3.219281 GGAGAGAGAGACGCCTTAGAAT 58.781 50.000 0.00 0.00 0.00 2.40
4559 5268 3.634910 GGAGAGAGAGACGCCTTAGAATT 59.365 47.826 0.00 0.00 0.00 2.17
4562 5271 6.139048 AGAGAGAGACGCCTTAGAATTAAC 57.861 41.667 0.00 0.00 0.00 2.01
4563 5272 5.068067 AGAGAGAGACGCCTTAGAATTAACC 59.932 44.000 0.00 0.00 0.00 2.85
4565 5274 5.364157 AGAGAGACGCCTTAGAATTAACCAT 59.636 40.000 0.00 0.00 0.00 3.55
4567 5276 7.233757 AGAGAGACGCCTTAGAATTAACCATAT 59.766 37.037 0.00 0.00 0.00 1.78
4568 5277 7.736893 AGAGACGCCTTAGAATTAACCATATT 58.263 34.615 0.00 0.00 0.00 1.28
4569 5278 7.873505 AGAGACGCCTTAGAATTAACCATATTC 59.126 37.037 0.00 0.00 33.23 1.75
4572 5281 7.927048 ACGCCTTAGAATTAACCATATTCAAC 58.073 34.615 0.00 0.00 35.04 3.18
4574 5283 7.855904 CGCCTTAGAATTAACCATATTCAACAC 59.144 37.037 0.00 0.00 35.04 3.32
4575 5284 8.682710 GCCTTAGAATTAACCATATTCAACACA 58.317 33.333 0.00 0.00 35.04 3.72
4607 5316 9.619316 TTTTATTATTTTGTGTGAACATCGAGG 57.381 29.630 0.00 0.00 0.00 4.63
4608 5317 3.559238 ATTTTGTGTGAACATCGAGGC 57.441 42.857 0.00 0.00 0.00 4.70
4609 5318 1.234821 TTTGTGTGAACATCGAGGCC 58.765 50.000 0.00 0.00 0.00 5.19
4610 5319 0.107643 TTGTGTGAACATCGAGGCCA 59.892 50.000 5.01 0.00 0.00 5.36
4611 5320 0.324614 TGTGTGAACATCGAGGCCAT 59.675 50.000 5.01 0.00 0.00 4.40
4612 5321 1.009829 GTGTGAACATCGAGGCCATC 58.990 55.000 5.01 0.00 0.00 3.51
4628 5337 2.440247 TCGCTGGCGAGGATGAGA 60.440 61.111 13.78 0.00 44.01 3.27
4629 5338 2.052104 TCGCTGGCGAGGATGAGAA 61.052 57.895 13.78 0.00 44.01 2.87
4630 5339 1.591059 CGCTGGCGAGGATGAGAAG 60.591 63.158 9.51 0.00 42.83 2.85
4631 5340 1.227497 GCTGGCGAGGATGAGAAGG 60.227 63.158 0.00 0.00 0.00 3.46
4632 5341 1.680522 GCTGGCGAGGATGAGAAGGA 61.681 60.000 0.00 0.00 0.00 3.36
4633 5342 0.388659 CTGGCGAGGATGAGAAGGAG 59.611 60.000 0.00 0.00 0.00 3.69
4634 5343 1.045350 TGGCGAGGATGAGAAGGAGG 61.045 60.000 0.00 0.00 0.00 4.30
4635 5344 0.757188 GGCGAGGATGAGAAGGAGGA 60.757 60.000 0.00 0.00 0.00 3.71
4636 5345 1.337118 GCGAGGATGAGAAGGAGGAT 58.663 55.000 0.00 0.00 0.00 3.24
4637 5346 2.520069 GCGAGGATGAGAAGGAGGATA 58.480 52.381 0.00 0.00 0.00 2.59
4638 5347 2.894126 GCGAGGATGAGAAGGAGGATAA 59.106 50.000 0.00 0.00 0.00 1.75
4639 5348 3.056891 GCGAGGATGAGAAGGAGGATAAG 60.057 52.174 0.00 0.00 0.00 1.73
4640 5349 4.148838 CGAGGATGAGAAGGAGGATAAGT 58.851 47.826 0.00 0.00 0.00 2.24
4641 5350 4.022416 CGAGGATGAGAAGGAGGATAAGTG 60.022 50.000 0.00 0.00 0.00 3.16
4642 5351 4.230455 AGGATGAGAAGGAGGATAAGTGG 58.770 47.826 0.00 0.00 0.00 4.00
4643 5352 3.244387 GGATGAGAAGGAGGATAAGTGGC 60.244 52.174 0.00 0.00 0.00 5.01
4644 5353 2.832838 TGAGAAGGAGGATAAGTGGCA 58.167 47.619 0.00 0.00 0.00 4.92
4645 5354 3.181329 TGAGAAGGAGGATAAGTGGCAA 58.819 45.455 0.00 0.00 0.00 4.52
4646 5355 3.055094 TGAGAAGGAGGATAAGTGGCAAC 60.055 47.826 0.00 0.00 0.00 4.17
4660 5369 3.523606 TGGCAACACAAATATGATGCC 57.476 42.857 17.34 17.34 46.17 4.40
4661 5370 3.098377 TGGCAACACAAATATGATGCCT 58.902 40.909 22.49 0.00 45.64 4.75
4662 5371 3.130869 TGGCAACACAAATATGATGCCTC 59.869 43.478 22.49 3.75 45.64 4.70
4663 5372 3.365832 GCAACACAAATATGATGCCTCG 58.634 45.455 0.00 0.00 32.22 4.63
4664 5373 3.365832 CAACACAAATATGATGCCTCGC 58.634 45.455 0.00 0.00 0.00 5.03
4665 5374 2.642427 ACACAAATATGATGCCTCGCA 58.358 42.857 0.00 0.00 44.86 5.10
4666 5375 3.016031 ACACAAATATGATGCCTCGCAA 58.984 40.909 0.00 0.00 43.62 4.85
4667 5376 3.443329 ACACAAATATGATGCCTCGCAAA 59.557 39.130 0.00 0.00 43.62 3.68
4668 5377 4.082300 ACACAAATATGATGCCTCGCAAAA 60.082 37.500 0.00 0.00 43.62 2.44
4669 5378 4.863689 CACAAATATGATGCCTCGCAAAAA 59.136 37.500 0.00 0.00 43.62 1.94
4670 5379 5.521010 CACAAATATGATGCCTCGCAAAAAT 59.479 36.000 0.00 0.00 43.62 1.82
4671 5380 6.696583 CACAAATATGATGCCTCGCAAAAATA 59.303 34.615 0.00 0.00 43.62 1.40
4672 5381 7.222417 CACAAATATGATGCCTCGCAAAAATAA 59.778 33.333 0.00 0.00 43.62 1.40
4673 5382 7.763528 ACAAATATGATGCCTCGCAAAAATAAA 59.236 29.630 0.00 0.00 43.62 1.40
4674 5383 7.935338 AATATGATGCCTCGCAAAAATAAAG 57.065 32.000 0.00 0.00 43.62 1.85
4675 5384 5.581126 ATGATGCCTCGCAAAAATAAAGA 57.419 34.783 0.00 0.00 43.62 2.52
4676 5385 5.384063 TGATGCCTCGCAAAAATAAAGAA 57.616 34.783 0.00 0.00 43.62 2.52
4677 5386 5.401550 TGATGCCTCGCAAAAATAAAGAAG 58.598 37.500 0.00 0.00 43.62 2.85
4678 5387 5.182950 TGATGCCTCGCAAAAATAAAGAAGA 59.817 36.000 0.00 0.00 43.62 2.87
4679 5388 5.643379 TGCCTCGCAAAAATAAAGAAGAT 57.357 34.783 0.00 0.00 34.76 2.40
4680 5389 5.401550 TGCCTCGCAAAAATAAAGAAGATG 58.598 37.500 0.00 0.00 34.76 2.90
4681 5390 5.182950 TGCCTCGCAAAAATAAAGAAGATGA 59.817 36.000 0.00 0.00 34.76 2.92
4682 5391 6.092748 GCCTCGCAAAAATAAAGAAGATGAA 58.907 36.000 0.00 0.00 0.00 2.57
4683 5392 6.033937 GCCTCGCAAAAATAAAGAAGATGAAC 59.966 38.462 0.00 0.00 0.00 3.18
4684 5393 6.528072 CCTCGCAAAAATAAAGAAGATGAACC 59.472 38.462 0.00 0.00 0.00 3.62
4685 5394 7.214467 TCGCAAAAATAAAGAAGATGAACCT 57.786 32.000 0.00 0.00 0.00 3.50
4686 5395 8.330466 TCGCAAAAATAAAGAAGATGAACCTA 57.670 30.769 0.00 0.00 0.00 3.08
4687 5396 8.956426 TCGCAAAAATAAAGAAGATGAACCTAT 58.044 29.630 0.00 0.00 0.00 2.57
4688 5397 9.573133 CGCAAAAATAAAGAAGATGAACCTATT 57.427 29.630 0.00 0.00 0.00 1.73
4693 5402 9.533831 AAATAAAGAAGATGAACCTATTGTGGT 57.466 29.630 0.00 0.00 43.11 4.16
4694 5403 8.738645 ATAAAGAAGATGAACCTATTGTGGTC 57.261 34.615 0.00 0.00 39.83 4.02
4695 5404 6.380079 AAGAAGATGAACCTATTGTGGTCT 57.620 37.500 0.00 0.00 39.83 3.85
4696 5405 6.380079 AGAAGATGAACCTATTGTGGTCTT 57.620 37.500 0.00 0.00 39.83 3.01
4697 5406 6.176183 AGAAGATGAACCTATTGTGGTCTTG 58.824 40.000 0.00 0.00 39.83 3.02
4698 5407 5.762179 AGATGAACCTATTGTGGTCTTGA 57.238 39.130 0.00 0.00 39.83 3.02
4699 5408 5.738909 AGATGAACCTATTGTGGTCTTGAG 58.261 41.667 0.00 0.00 39.83 3.02
4700 5409 4.974645 TGAACCTATTGTGGTCTTGAGT 57.025 40.909 0.00 0.00 39.83 3.41
4701 5410 4.641396 TGAACCTATTGTGGTCTTGAGTG 58.359 43.478 0.00 0.00 39.83 3.51
4702 5411 4.346709 TGAACCTATTGTGGTCTTGAGTGA 59.653 41.667 0.00 0.00 39.83 3.41
4703 5412 5.013079 TGAACCTATTGTGGTCTTGAGTGAT 59.987 40.000 0.00 0.00 39.83 3.06
4704 5413 4.836825 ACCTATTGTGGTCTTGAGTGATG 58.163 43.478 0.00 0.00 34.86 3.07
4705 5414 4.194640 CCTATTGTGGTCTTGAGTGATGG 58.805 47.826 0.00 0.00 0.00 3.51
4706 5415 3.795688 ATTGTGGTCTTGAGTGATGGT 57.204 42.857 0.00 0.00 0.00 3.55
4707 5416 3.576078 TTGTGGTCTTGAGTGATGGTT 57.424 42.857 0.00 0.00 0.00 3.67
4708 5417 2.849942 TGTGGTCTTGAGTGATGGTTG 58.150 47.619 0.00 0.00 0.00 3.77
4709 5418 2.172505 TGTGGTCTTGAGTGATGGTTGT 59.827 45.455 0.00 0.00 0.00 3.32
4710 5419 3.214328 GTGGTCTTGAGTGATGGTTGTT 58.786 45.455 0.00 0.00 0.00 2.83
4711 5420 3.003689 GTGGTCTTGAGTGATGGTTGTTG 59.996 47.826 0.00 0.00 0.00 3.33
4712 5421 3.118075 TGGTCTTGAGTGATGGTTGTTGA 60.118 43.478 0.00 0.00 0.00 3.18
4713 5422 3.499918 GGTCTTGAGTGATGGTTGTTGAG 59.500 47.826 0.00 0.00 0.00 3.02
4714 5423 4.130118 GTCTTGAGTGATGGTTGTTGAGT 58.870 43.478 0.00 0.00 0.00 3.41
4715 5424 4.576463 GTCTTGAGTGATGGTTGTTGAGTT 59.424 41.667 0.00 0.00 0.00 3.01
4716 5425 5.758296 GTCTTGAGTGATGGTTGTTGAGTTA 59.242 40.000 0.00 0.00 0.00 2.24
4717 5426 6.260050 GTCTTGAGTGATGGTTGTTGAGTTAA 59.740 38.462 0.00 0.00 0.00 2.01
4718 5427 6.483307 TCTTGAGTGATGGTTGTTGAGTTAAG 59.517 38.462 0.00 0.00 0.00 1.85
4719 5428 5.924356 TGAGTGATGGTTGTTGAGTTAAGA 58.076 37.500 0.00 0.00 0.00 2.10
4720 5429 5.991606 TGAGTGATGGTTGTTGAGTTAAGAG 59.008 40.000 0.00 0.00 0.00 2.85
4721 5430 5.930135 AGTGATGGTTGTTGAGTTAAGAGT 58.070 37.500 0.00 0.00 0.00 3.24
4722 5431 5.760253 AGTGATGGTTGTTGAGTTAAGAGTG 59.240 40.000 0.00 0.00 0.00 3.51
4723 5432 5.527582 GTGATGGTTGTTGAGTTAAGAGTGT 59.472 40.000 0.00 0.00 0.00 3.55
4724 5433 6.704493 GTGATGGTTGTTGAGTTAAGAGTGTA 59.296 38.462 0.00 0.00 0.00 2.90
4725 5434 7.387948 GTGATGGTTGTTGAGTTAAGAGTGTAT 59.612 37.037 0.00 0.00 0.00 2.29
4726 5435 7.387673 TGATGGTTGTTGAGTTAAGAGTGTATG 59.612 37.037 0.00 0.00 0.00 2.39
4727 5436 6.588204 TGGTTGTTGAGTTAAGAGTGTATGT 58.412 36.000 0.00 0.00 0.00 2.29
4728 5437 7.051623 TGGTTGTTGAGTTAAGAGTGTATGTT 58.948 34.615 0.00 0.00 0.00 2.71
4729 5438 8.205512 TGGTTGTTGAGTTAAGAGTGTATGTTA 58.794 33.333 0.00 0.00 0.00 2.41
4730 5439 9.216117 GGTTGTTGAGTTAAGAGTGTATGTTAT 57.784 33.333 0.00 0.00 0.00 1.89
4732 5441 9.772973 TTGTTGAGTTAAGAGTGTATGTTATGT 57.227 29.630 0.00 0.00 0.00 2.29
4733 5442 9.772973 TGTTGAGTTAAGAGTGTATGTTATGTT 57.227 29.630 0.00 0.00 0.00 2.71
4741 5450 8.779354 AAGAGTGTATGTTATGTTTTCTCTCC 57.221 34.615 0.00 0.00 0.00 3.71
4742 5451 7.331791 AGAGTGTATGTTATGTTTTCTCTCCC 58.668 38.462 0.00 0.00 0.00 4.30
4743 5452 6.106673 AGTGTATGTTATGTTTTCTCTCCCG 58.893 40.000 0.00 0.00 0.00 5.14
4744 5453 5.873164 GTGTATGTTATGTTTTCTCTCCCGT 59.127 40.000 0.00 0.00 0.00 5.28
4745 5454 6.370718 GTGTATGTTATGTTTTCTCTCCCGTT 59.629 38.462 0.00 0.00 0.00 4.44
4746 5455 5.880054 ATGTTATGTTTTCTCTCCCGTTG 57.120 39.130 0.00 0.00 0.00 4.10
4747 5456 3.500680 TGTTATGTTTTCTCTCCCGTTGC 59.499 43.478 0.00 0.00 0.00 4.17
4748 5457 2.270352 ATGTTTTCTCTCCCGTTGCA 57.730 45.000 0.00 0.00 0.00 4.08
4749 5458 2.045561 TGTTTTCTCTCCCGTTGCAA 57.954 45.000 0.00 0.00 0.00 4.08
4750 5459 1.673920 TGTTTTCTCTCCCGTTGCAAC 59.326 47.619 19.89 19.89 0.00 4.17
4760 5469 4.683334 GTTGCAACGCACGGGCTC 62.683 66.667 14.90 0.00 38.71 4.70
4761 5470 4.927782 TTGCAACGCACGGGCTCT 62.928 61.111 8.62 0.00 38.71 4.09
4762 5471 4.927782 TGCAACGCACGGGCTCTT 62.928 61.111 8.62 0.00 38.10 2.85
4763 5472 3.660111 GCAACGCACGGGCTCTTT 61.660 61.111 8.62 0.00 38.10 2.52
4764 5473 3.030652 CAACGCACGGGCTCTTTT 58.969 55.556 8.62 0.00 38.10 2.27
4765 5474 1.370414 CAACGCACGGGCTCTTTTG 60.370 57.895 8.62 1.62 38.10 2.44
4766 5475 3.194272 AACGCACGGGCTCTTTTGC 62.194 57.895 8.62 0.00 38.10 3.68
4767 5476 3.357079 CGCACGGGCTCTTTTGCT 61.357 61.111 8.62 0.00 38.10 3.91
4776 5485 5.344933 CACGGGCTCTTTTGCTAATAAAAAC 59.655 40.000 0.00 0.00 0.00 2.43
4782 5491 7.655732 GGCTCTTTTGCTAATAAAAACAAAGGA 59.344 33.333 0.00 0.00 36.25 3.36
4796 5505 6.436843 AAACAAAGGAAGTATATTCTGCCG 57.563 37.500 0.84 0.00 38.16 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 3.838271 GGGGCGACGATGCTGAGA 61.838 66.667 0.00 0.00 34.52 3.27
126 127 1.279846 GGTTGAATACGTGGGGGAGAA 59.720 52.381 0.00 0.00 0.00 2.87
254 263 1.268899 GGCATATGAGCAAGCATCCAC 59.731 52.381 6.97 0.00 35.83 4.02
278 287 2.370349 GCTACTGCTAGAGTCTCCACA 58.630 52.381 0.00 0.00 35.96 4.17
299 308 2.639286 CACGGAACCAGTGCAAGC 59.361 61.111 0.00 0.00 32.52 4.01
329 338 2.738846 CAAGCGCCATCCATCTATGTAC 59.261 50.000 2.29 0.00 0.00 2.90
332 341 0.520404 GCAAGCGCCATCCATCTATG 59.480 55.000 2.29 0.00 0.00 2.23
335 344 1.822613 CTGCAAGCGCCATCCATCT 60.823 57.895 2.29 0.00 37.32 2.90
350 359 4.395583 GTGCTCGCCTGCAACTGC 62.396 66.667 0.00 0.00 45.12 4.40
351 360 4.081030 CGTGCTCGCCTGCAACTG 62.081 66.667 0.00 0.00 45.12 3.16
447 470 1.301953 ACGTGTAGGCGGGTTTTCC 60.302 57.895 0.00 0.00 39.75 3.13
456 479 0.881600 AAAACCGGTCACGTGTAGGC 60.882 55.000 16.51 4.66 38.78 3.93
467 490 3.306780 CCAGAGTAGATGACAAAACCGGT 60.307 47.826 0.00 0.00 0.00 5.28
476 499 3.927142 CGTCCAAAACCAGAGTAGATGAC 59.073 47.826 0.00 0.00 0.00 3.06
477 500 3.830178 TCGTCCAAAACCAGAGTAGATGA 59.170 43.478 0.00 0.00 0.00 2.92
479 502 4.884668 TTCGTCCAAAACCAGAGTAGAT 57.115 40.909 0.00 0.00 0.00 1.98
505 528 1.566018 CCTCGTGCTCAAAACCGGAC 61.566 60.000 9.46 0.00 0.00 4.79
598 621 0.608130 AAGCATCGTACTGAGTGGCA 59.392 50.000 0.00 0.00 0.00 4.92
605 628 2.031245 TGTTTTGCCAAGCATCGTACTG 60.031 45.455 0.00 0.00 38.76 2.74
740 765 7.607991 ACACTGTTTCAGAAATTCAGGTATAGG 59.392 37.037 14.81 3.83 35.18 2.57
810 835 6.736243 GTGGTCGGTCAATACCAAAATTGAAA 60.736 38.462 1.11 0.00 46.97 2.69
812 837 4.216687 GTGGTCGGTCAATACCAAAATTGA 59.783 41.667 0.00 0.00 46.97 2.57
815 840 3.756434 CAGTGGTCGGTCAATACCAAAAT 59.244 43.478 0.00 0.00 46.97 1.82
818 843 1.972075 TCAGTGGTCGGTCAATACCAA 59.028 47.619 0.00 0.00 46.97 3.67
866 891 3.625313 TGTCAGTCAAAATCGCAAAGTCA 59.375 39.130 0.00 0.00 0.00 3.41
956 981 5.856156 TGAGTGTTCAGTATAAACCGGAAA 58.144 37.500 9.46 0.00 0.00 3.13
1011 1036 2.280524 TTGCGGTGCTTACGTGCT 60.281 55.556 0.00 0.00 0.00 4.40
1248 1283 4.895961 TCGTCACTCTAACAAGAGAGAGA 58.104 43.478 9.31 2.26 45.03 3.10
1249 1284 4.094294 CCTCGTCACTCTAACAAGAGAGAG 59.906 50.000 9.31 10.54 45.03 3.20
1250 1285 4.004314 CCTCGTCACTCTAACAAGAGAGA 58.996 47.826 9.31 4.12 45.03 3.10
1657 1835 1.412710 TCCCATAGCGCCTTCAGTAAG 59.587 52.381 2.29 0.00 0.00 2.34
1989 2192 2.300152 TGGATAGCAGTGGTAGCATAGC 59.700 50.000 18.40 12.03 40.09 2.97
1993 2196 2.118679 ACATGGATAGCAGTGGTAGCA 58.881 47.619 18.40 6.15 0.00 3.49
1994 2197 2.487934 CACATGGATAGCAGTGGTAGC 58.512 52.381 9.08 9.08 0.00 3.58
1995 2198 2.487934 GCACATGGATAGCAGTGGTAG 58.512 52.381 8.22 0.00 32.80 3.18
1998 2201 0.107066 TGGCACATGGATAGCAGTGG 60.107 55.000 0.00 0.00 32.80 4.00
1999 2202 1.134310 TCTGGCACATGGATAGCAGTG 60.134 52.381 0.00 0.00 38.20 3.66
2000 2203 1.206878 TCTGGCACATGGATAGCAGT 58.793 50.000 0.00 0.00 38.20 4.40
2001 2204 1.945394 GTTCTGGCACATGGATAGCAG 59.055 52.381 0.00 0.00 38.20 4.24
2002 2205 1.408683 GGTTCTGGCACATGGATAGCA 60.409 52.381 0.00 0.00 38.20 3.49
2003 2206 1.312815 GGTTCTGGCACATGGATAGC 58.687 55.000 0.00 0.00 38.20 2.97
2004 2207 2.715749 TGGTTCTGGCACATGGATAG 57.284 50.000 0.00 0.00 38.20 2.08
2005 2208 2.509131 TCATGGTTCTGGCACATGGATA 59.491 45.455 13.76 0.00 41.64 2.59
2006 2209 1.285667 TCATGGTTCTGGCACATGGAT 59.714 47.619 13.76 0.00 41.64 3.41
2007 2210 0.697658 TCATGGTTCTGGCACATGGA 59.302 50.000 13.76 0.00 41.64 3.41
2008 2211 1.100510 CTCATGGTTCTGGCACATGG 58.899 55.000 13.76 3.90 41.64 3.66
2009 2212 1.830279 ACTCATGGTTCTGGCACATG 58.170 50.000 8.97 8.97 42.44 3.21
2010 2213 2.165167 CAACTCATGGTTCTGGCACAT 58.835 47.619 0.00 0.00 34.52 3.21
2011 2214 1.608055 CAACTCATGGTTCTGGCACA 58.392 50.000 0.00 0.00 35.74 4.57
2012 2215 0.883833 CCAACTCATGGTTCTGGCAC 59.116 55.000 0.00 0.00 44.85 5.01
2013 2216 3.344703 CCAACTCATGGTTCTGGCA 57.655 52.632 0.00 0.00 44.85 4.92
2022 2225 3.516981 AGATCTCGTGACCAACTCATG 57.483 47.619 0.00 0.00 37.26 3.07
2023 2226 5.452496 CCATAAGATCTCGTGACCAACTCAT 60.452 44.000 0.00 0.00 0.00 2.90
2024 2227 4.142160 CCATAAGATCTCGTGACCAACTCA 60.142 45.833 0.00 0.00 0.00 3.41
2025 2228 4.363999 CCATAAGATCTCGTGACCAACTC 58.636 47.826 0.00 0.00 0.00 3.01
2026 2229 3.133003 CCCATAAGATCTCGTGACCAACT 59.867 47.826 0.00 0.00 0.00 3.16
2027 2230 3.118738 ACCCATAAGATCTCGTGACCAAC 60.119 47.826 0.00 0.00 0.00 3.77
2028 2231 3.104512 ACCCATAAGATCTCGTGACCAA 58.895 45.455 0.00 0.00 0.00 3.67
2029 2232 2.747177 ACCCATAAGATCTCGTGACCA 58.253 47.619 0.00 0.00 0.00 4.02
2030 2233 3.821421 AACCCATAAGATCTCGTGACC 57.179 47.619 0.00 0.00 0.00 4.02
2031 2234 4.567159 GTGAAACCCATAAGATCTCGTGAC 59.433 45.833 0.00 0.00 0.00 3.67
2032 2235 4.755411 GTGAAACCCATAAGATCTCGTGA 58.245 43.478 0.00 0.00 0.00 4.35
2048 2251 1.485480 GGGGTAGGCTAGAGGTGAAAC 59.515 57.143 0.00 0.00 0.00 2.78
2049 2252 1.079825 TGGGGTAGGCTAGAGGTGAAA 59.920 52.381 0.00 0.00 0.00 2.69
2050 2253 0.714180 TGGGGTAGGCTAGAGGTGAA 59.286 55.000 0.00 0.00 0.00 3.18
2051 2254 0.714180 TTGGGGTAGGCTAGAGGTGA 59.286 55.000 0.00 0.00 0.00 4.02
2052 2255 0.831307 GTTGGGGTAGGCTAGAGGTG 59.169 60.000 0.00 0.00 0.00 4.00
2053 2256 0.717196 AGTTGGGGTAGGCTAGAGGT 59.283 55.000 0.00 0.00 0.00 3.85
2054 2257 1.486726 CAAGTTGGGGTAGGCTAGAGG 59.513 57.143 0.00 0.00 0.00 3.69
2055 2258 2.188817 ACAAGTTGGGGTAGGCTAGAG 58.811 52.381 7.96 0.00 0.00 2.43
2056 2259 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
2057 2260 3.081804 CAAACAAGTTGGGGTAGGCTAG 58.918 50.000 7.96 0.00 33.18 3.42
2058 2261 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
2059 2262 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
2068 2271 3.636764 AGCCTTTAGTCCCAAACAAGTTG 59.363 43.478 0.00 0.00 36.94 3.16
2069 2272 3.910989 AGCCTTTAGTCCCAAACAAGTT 58.089 40.909 0.00 0.00 0.00 2.66
2070 2273 3.595190 AGCCTTTAGTCCCAAACAAGT 57.405 42.857 0.00 0.00 0.00 3.16
2071 2274 4.099419 ACAAAGCCTTTAGTCCCAAACAAG 59.901 41.667 0.00 0.00 0.00 3.16
2072 2275 4.027437 ACAAAGCCTTTAGTCCCAAACAA 58.973 39.130 0.00 0.00 0.00 2.83
2073 2276 3.637769 ACAAAGCCTTTAGTCCCAAACA 58.362 40.909 0.00 0.00 0.00 2.83
2074 2277 4.142026 ACAACAAAGCCTTTAGTCCCAAAC 60.142 41.667 0.00 0.00 0.00 2.93
2075 2278 4.027437 ACAACAAAGCCTTTAGTCCCAAA 58.973 39.130 0.00 0.00 0.00 3.28
2076 2279 3.637769 ACAACAAAGCCTTTAGTCCCAA 58.362 40.909 0.00 0.00 0.00 4.12
2077 2280 3.306472 ACAACAAAGCCTTTAGTCCCA 57.694 42.857 0.00 0.00 0.00 4.37
2078 2281 3.383505 ACAACAACAAAGCCTTTAGTCCC 59.616 43.478 0.00 0.00 0.00 4.46
2079 2282 4.649088 ACAACAACAAAGCCTTTAGTCC 57.351 40.909 0.00 0.00 0.00 3.85
2080 2283 5.407502 ACAACAACAACAAAGCCTTTAGTC 58.592 37.500 0.00 0.00 0.00 2.59
2081 2284 5.400066 ACAACAACAACAAAGCCTTTAGT 57.600 34.783 0.00 0.00 0.00 2.24
2082 2285 5.637387 ACAACAACAACAACAAAGCCTTTAG 59.363 36.000 0.00 0.00 0.00 1.85
2083 2286 5.542779 ACAACAACAACAACAAAGCCTTTA 58.457 33.333 0.00 0.00 0.00 1.85
2084 2287 4.384940 ACAACAACAACAACAAAGCCTTT 58.615 34.783 0.00 0.00 0.00 3.11
2085 2288 4.001618 ACAACAACAACAACAAAGCCTT 57.998 36.364 0.00 0.00 0.00 4.35
2086 2289 3.676291 ACAACAACAACAACAAAGCCT 57.324 38.095 0.00 0.00 0.00 4.58
2087 2290 3.666638 GCAACAACAACAACAACAAAGCC 60.667 43.478 0.00 0.00 0.00 4.35
2088 2291 3.186205 AGCAACAACAACAACAACAAAGC 59.814 39.130 0.00 0.00 0.00 3.51
2089 2292 4.700332 CAGCAACAACAACAACAACAAAG 58.300 39.130 0.00 0.00 0.00 2.77
2090 2293 3.059325 GCAGCAACAACAACAACAACAAA 60.059 39.130 0.00 0.00 0.00 2.83
2091 2294 2.478134 GCAGCAACAACAACAACAACAA 59.522 40.909 0.00 0.00 0.00 2.83
2092 2295 2.064762 GCAGCAACAACAACAACAACA 58.935 42.857 0.00 0.00 0.00 3.33
2093 2296 2.092524 CAGCAGCAACAACAACAACAAC 59.907 45.455 0.00 0.00 0.00 3.32
2094 2297 2.335752 CAGCAGCAACAACAACAACAA 58.664 42.857 0.00 0.00 0.00 2.83
2095 2298 1.993542 CAGCAGCAACAACAACAACA 58.006 45.000 0.00 0.00 0.00 3.33
2096 2299 0.646895 GCAGCAGCAACAACAACAAC 59.353 50.000 0.00 0.00 41.58 3.32
2097 2300 0.531657 AGCAGCAGCAACAACAACAA 59.468 45.000 3.17 0.00 45.49 2.83
2098 2301 1.387539 TAGCAGCAGCAACAACAACA 58.612 45.000 3.17 0.00 45.49 3.33
2099 2302 2.322161 CATAGCAGCAGCAACAACAAC 58.678 47.619 3.17 0.00 45.49 3.32
2100 2303 1.336148 GCATAGCAGCAGCAACAACAA 60.336 47.619 3.17 0.00 45.49 2.83
2101 2304 0.241749 GCATAGCAGCAGCAACAACA 59.758 50.000 3.17 0.00 45.49 3.33
2102 2305 0.524862 AGCATAGCAGCAGCAACAAC 59.475 50.000 3.17 0.00 45.49 3.32
2103 2306 1.739466 GTAGCATAGCAGCAGCAACAA 59.261 47.619 3.17 0.00 45.49 2.83
2104 2307 1.372582 GTAGCATAGCAGCAGCAACA 58.627 50.000 3.17 0.00 45.49 3.33
2105 2308 0.659957 GGTAGCATAGCAGCAGCAAC 59.340 55.000 3.17 0.00 45.49 4.17
2106 2309 0.811219 CGGTAGCATAGCAGCAGCAA 60.811 55.000 3.17 0.00 45.49 3.91
2107 2310 1.227350 CGGTAGCATAGCAGCAGCA 60.227 57.895 3.17 0.00 45.49 4.41
2108 2311 2.602322 GCGGTAGCATAGCAGCAGC 61.602 63.158 0.00 0.00 44.35 5.25
2109 2312 3.635204 GCGGTAGCATAGCAGCAG 58.365 61.111 0.00 0.00 44.35 4.24
2112 2315 7.786988 ACTACAGTATAGCGGTAGCATAGCAG 61.787 46.154 0.00 0.00 45.61 4.24
2173 2376 6.708949 CAGTAAAGCCTACAGGTAGTTTTGAA 59.291 38.462 5.79 0.00 37.57 2.69
2174 2377 6.228258 CAGTAAAGCCTACAGGTAGTTTTGA 58.772 40.000 5.79 0.00 37.57 2.69
2228 2431 4.124851 AGACTGGATAGCAGTTTTACCG 57.875 45.455 0.00 0.00 32.33 4.02
2261 2464 4.425577 ACGAATGTTTCAAGGCATCTTC 57.574 40.909 0.00 0.00 0.00 2.87
2384 2587 4.325741 CGCAGTACTTCATCAGAGTTTCTG 59.674 45.833 0.00 0.00 45.59 3.02
2503 2707 6.959361 AGCACAAAACACATTCTACTAACAG 58.041 36.000 0.00 0.00 0.00 3.16
2675 2994 6.987404 TCATGGTACGTAGCAAATTAGCAATA 59.013 34.615 29.08 3.64 37.24 1.90
2763 3393 1.301244 AGCAGCTCCAGTTGTGACG 60.301 57.895 0.00 0.00 0.00 4.35
2861 3491 4.347876 AGCTTTTTAAATCCAGGCCTGTTT 59.652 37.500 30.63 25.34 0.00 2.83
2969 3608 0.390603 TTCCGCAAGTACATCCGGTG 60.391 55.000 14.82 1.37 41.38 4.94
3031 3670 0.618458 TGACTGGTGGCCCTCATAAC 59.382 55.000 0.00 0.00 0.00 1.89
3203 3848 8.805688 GTCTAACTGGTCTACATAACGAAATTC 58.194 37.037 0.00 0.00 0.00 2.17
3219 3866 4.081807 GGTTGATAACCGAGTCTAACTGGT 60.082 45.833 0.00 0.00 42.62 4.00
3266 3948 4.473196 GGTGGTGGAAATATCCCCAAAATT 59.527 41.667 6.64 0.00 45.95 1.82
3271 3953 1.687492 TGGTGGTGGAAATATCCCCA 58.313 50.000 2.20 2.20 45.95 4.96
3359 4041 0.995024 CTTCCACATCCTTCCCCTGT 59.005 55.000 0.00 0.00 0.00 4.00
3451 4133 4.785346 ATGAACTAACCAGATGCTCCAT 57.215 40.909 0.00 0.00 0.00 3.41
3522 4208 2.642425 GCAGCAGCATGGCTCATAT 58.358 52.632 0.00 0.00 43.68 1.78
3650 4336 2.287368 GCAAGGAAAACCAACTGTACCG 60.287 50.000 0.00 0.00 0.00 4.02
3694 4381 7.064134 CGCTGTACCTGAAAACTCACATAATAA 59.936 37.037 0.00 0.00 0.00 1.40
3695 4382 6.533723 CGCTGTACCTGAAAACTCACATAATA 59.466 38.462 0.00 0.00 0.00 0.98
3696 4383 5.351465 CGCTGTACCTGAAAACTCACATAAT 59.649 40.000 0.00 0.00 0.00 1.28
3719 4406 5.456192 AATTAGCAATCTTCTCGTGAACG 57.544 39.130 0.00 0.00 41.45 3.95
3877 4564 3.559655 CACATATTACCACCCATCACGTG 59.440 47.826 9.94 9.94 0.00 4.49
3878 4565 3.452990 TCACATATTACCACCCATCACGT 59.547 43.478 0.00 0.00 0.00 4.49
3904 4592 7.308770 GGGTACAAGTTTTGTGGTATTACTTCC 60.309 40.741 4.78 0.00 45.03 3.46
3932 4620 2.038952 TCATACATAGGCCAGGCATGTC 59.961 50.000 18.47 0.00 34.78 3.06
3975 4663 3.961408 CCTATATTATGGGACGGAGGGAG 59.039 52.174 0.00 0.00 31.57 4.30
3976 4664 3.599240 TCCTATATTATGGGACGGAGGGA 59.401 47.826 4.74 0.00 34.71 4.20
3977 4665 3.990369 TCCTATATTATGGGACGGAGGG 58.010 50.000 4.74 0.00 34.71 4.30
3984 4672 6.014840 GTCCAGAAACGTCCTATATTATGGGA 60.015 42.308 4.74 4.74 37.61 4.37
3985 4673 6.164176 GTCCAGAAACGTCCTATATTATGGG 58.836 44.000 8.71 0.00 35.42 4.00
3986 4674 6.645415 GTGTCCAGAAACGTCCTATATTATGG 59.355 42.308 3.24 3.24 35.89 2.74
3987 4675 7.434492 AGTGTCCAGAAACGTCCTATATTATG 58.566 38.462 0.00 0.00 0.00 1.90
3988 4676 7.598759 AGTGTCCAGAAACGTCCTATATTAT 57.401 36.000 0.00 0.00 0.00 1.28
3989 4677 8.573885 CATAGTGTCCAGAAACGTCCTATATTA 58.426 37.037 0.00 0.00 0.00 0.98
3990 4678 5.934402 AGTGTCCAGAAACGTCCTATATT 57.066 39.130 0.00 0.00 0.00 1.28
3991 4679 6.516860 GCATAGTGTCCAGAAACGTCCTATAT 60.517 42.308 0.00 0.00 0.00 0.86
3992 4680 5.221185 GCATAGTGTCCAGAAACGTCCTATA 60.221 44.000 0.00 0.00 0.00 1.31
3993 4681 4.441634 GCATAGTGTCCAGAAACGTCCTAT 60.442 45.833 0.00 0.00 0.00 2.57
3994 4682 3.119245 GCATAGTGTCCAGAAACGTCCTA 60.119 47.826 0.00 0.00 0.00 2.94
3995 4683 2.353803 GCATAGTGTCCAGAAACGTCCT 60.354 50.000 0.00 0.00 0.00 3.85
3996 4684 2.000447 GCATAGTGTCCAGAAACGTCC 59.000 52.381 0.00 0.00 0.00 4.79
3997 4685 2.960819 AGCATAGTGTCCAGAAACGTC 58.039 47.619 0.00 0.00 0.00 4.34
3998 4686 4.111375 CTAGCATAGTGTCCAGAAACGT 57.889 45.455 0.00 0.00 32.85 3.99
4025 4713 5.122711 CCGTCCCATAATGTAAGACGTTTTT 59.877 40.000 9.63 0.00 46.62 1.94
4026 4714 4.632688 CCGTCCCATAATGTAAGACGTTTT 59.367 41.667 9.63 0.00 46.62 2.43
4027 4715 4.081531 TCCGTCCCATAATGTAAGACGTTT 60.082 41.667 9.63 0.00 46.62 3.60
4028 4716 3.448301 TCCGTCCCATAATGTAAGACGTT 59.552 43.478 9.63 0.00 46.62 3.99
4029 4717 3.025978 TCCGTCCCATAATGTAAGACGT 58.974 45.455 9.63 0.00 46.62 4.34
4031 4719 3.640029 TCCTCCGTCCCATAATGTAAGAC 59.360 47.826 0.00 0.00 0.00 3.01
4032 4720 3.918566 TCCTCCGTCCCATAATGTAAGA 58.081 45.455 0.00 0.00 0.00 2.10
4033 4721 4.101119 ACTTCCTCCGTCCCATAATGTAAG 59.899 45.833 0.00 0.00 0.00 2.34
4034 4722 4.035112 ACTTCCTCCGTCCCATAATGTAA 58.965 43.478 0.00 0.00 0.00 2.41
4035 4723 3.649843 ACTTCCTCCGTCCCATAATGTA 58.350 45.455 0.00 0.00 0.00 2.29
4036 4724 2.478292 ACTTCCTCCGTCCCATAATGT 58.522 47.619 0.00 0.00 0.00 2.71
4037 4725 3.641906 ACTACTTCCTCCGTCCCATAATG 59.358 47.826 0.00 0.00 0.00 1.90
4038 4726 3.924922 ACTACTTCCTCCGTCCCATAAT 58.075 45.455 0.00 0.00 0.00 1.28
4039 4727 3.393426 ACTACTTCCTCCGTCCCATAA 57.607 47.619 0.00 0.00 0.00 1.90
4040 4728 3.028850 CAACTACTTCCTCCGTCCCATA 58.971 50.000 0.00 0.00 0.00 2.74
4041 4729 1.831736 CAACTACTTCCTCCGTCCCAT 59.168 52.381 0.00 0.00 0.00 4.00
4042 4730 1.263356 CAACTACTTCCTCCGTCCCA 58.737 55.000 0.00 0.00 0.00 4.37
4043 4731 0.108281 GCAACTACTTCCTCCGTCCC 60.108 60.000 0.00 0.00 0.00 4.46
4044 4732 0.896226 AGCAACTACTTCCTCCGTCC 59.104 55.000 0.00 0.00 0.00 4.79
4045 4733 1.544691 TCAGCAACTACTTCCTCCGTC 59.455 52.381 0.00 0.00 0.00 4.79
4046 4734 1.629043 TCAGCAACTACTTCCTCCGT 58.371 50.000 0.00 0.00 0.00 4.69
4047 4735 2.428890 AGATCAGCAACTACTTCCTCCG 59.571 50.000 0.00 0.00 0.00 4.63
4048 4736 3.449018 TCAGATCAGCAACTACTTCCTCC 59.551 47.826 0.00 0.00 0.00 4.30
4049 4737 4.727507 TCAGATCAGCAACTACTTCCTC 57.272 45.455 0.00 0.00 0.00 3.71
4050 4738 5.690464 AATCAGATCAGCAACTACTTCCT 57.310 39.130 0.00 0.00 0.00 3.36
4051 4739 6.578023 ACTAATCAGATCAGCAACTACTTCC 58.422 40.000 0.00 0.00 0.00 3.46
4052 4740 9.243637 CTTACTAATCAGATCAGCAACTACTTC 57.756 37.037 0.00 0.00 0.00 3.01
4053 4741 8.972127 TCTTACTAATCAGATCAGCAACTACTT 58.028 33.333 0.00 0.00 0.00 2.24
4054 4742 8.526667 TCTTACTAATCAGATCAGCAACTACT 57.473 34.615 0.00 0.00 0.00 2.57
4055 4743 9.190858 CATCTTACTAATCAGATCAGCAACTAC 57.809 37.037 0.00 0.00 0.00 2.73
4056 4744 7.869937 GCATCTTACTAATCAGATCAGCAACTA 59.130 37.037 0.00 0.00 0.00 2.24
4057 4745 6.705381 GCATCTTACTAATCAGATCAGCAACT 59.295 38.462 0.00 0.00 0.00 3.16
4150 4838 3.788227 AACTTGGCTTCATAGTCCACA 57.212 42.857 0.00 0.00 30.56 4.17
4152 4840 4.640771 AGAAACTTGGCTTCATAGTCCA 57.359 40.909 0.00 0.00 0.00 4.02
4163 4851 1.140852 AGGGGCAAAAAGAAACTTGGC 59.859 47.619 0.12 0.12 44.89 4.52
4164 4852 3.558931 AAGGGGCAAAAAGAAACTTGG 57.441 42.857 0.00 0.00 0.00 3.61
4186 4883 2.298729 GCTTCCATACCCAAGCACAAAA 59.701 45.455 0.00 0.00 43.87 2.44
4188 4885 1.544724 GCTTCCATACCCAAGCACAA 58.455 50.000 0.00 0.00 43.87 3.33
4203 4900 3.075866 GCAATGCTATGACCTTGCTTC 57.924 47.619 0.00 0.00 40.55 3.86
4223 4920 6.399249 CGTTGATGTTTATTGCTTTGCAGAAG 60.399 38.462 4.78 4.78 40.61 2.85
4244 4942 2.932614 CAACTCAGATAAGAGGGCGTTG 59.067 50.000 0.00 0.00 39.97 4.10
4297 4996 5.124457 ACTTGCACCATCAAAGCTATACTTG 59.876 40.000 0.00 0.00 39.09 3.16
4300 4999 4.878397 AGACTTGCACCATCAAAGCTATAC 59.122 41.667 0.00 0.00 0.00 1.47
4308 5007 3.141398 GACAAGAGACTTGCACCATCAA 58.859 45.455 10.78 0.00 0.00 2.57
4319 5018 8.778358 CAAAATTAGTTGCTTAGACAAGAGACT 58.222 33.333 0.00 0.00 34.66 3.24
4372 5071 7.499895 ACAAAGAATAAGTAAAAACGGAGGACA 59.500 33.333 0.00 0.00 0.00 4.02
4373 5072 7.868775 ACAAAGAATAAGTAAAAACGGAGGAC 58.131 34.615 0.00 0.00 0.00 3.85
4441 5150 4.381863 GGTATGCACGTGTAGTTATCGATG 59.618 45.833 18.38 0.00 0.00 3.84
4444 5153 3.961182 AGGTATGCACGTGTAGTTATCG 58.039 45.455 18.38 0.00 0.00 2.92
4446 5155 4.643334 TCAGAGGTATGCACGTGTAGTTAT 59.357 41.667 18.38 0.00 0.00 1.89
4449 5158 2.443416 TCAGAGGTATGCACGTGTAGT 58.557 47.619 18.38 6.08 0.00 2.73
4451 5160 3.945981 TTTCAGAGGTATGCACGTGTA 57.054 42.857 18.38 14.09 0.00 2.90
4452 5161 2.831685 TTTCAGAGGTATGCACGTGT 57.168 45.000 18.38 0.00 0.00 4.49
4454 5163 4.072131 ACATTTTTCAGAGGTATGCACGT 58.928 39.130 0.00 0.00 0.00 4.49
4455 5164 4.651994 GACATTTTTCAGAGGTATGCACG 58.348 43.478 0.00 0.00 0.00 5.34
4458 5167 3.126858 TGCGACATTTTTCAGAGGTATGC 59.873 43.478 0.00 0.00 0.00 3.14
4461 5170 4.637276 TCTTGCGACATTTTTCAGAGGTA 58.363 39.130 0.00 0.00 0.00 3.08
4462 5171 3.476552 TCTTGCGACATTTTTCAGAGGT 58.523 40.909 0.00 0.00 0.00 3.85
4463 5172 3.748048 TCTCTTGCGACATTTTTCAGAGG 59.252 43.478 0.00 0.00 0.00 3.69
4466 5175 5.743398 TGTTTTCTCTTGCGACATTTTTCAG 59.257 36.000 0.00 0.00 0.00 3.02
4467 5176 5.645624 TGTTTTCTCTTGCGACATTTTTCA 58.354 33.333 0.00 0.00 0.00 2.69
4468 5177 6.034470 TGTTGTTTTCTCTTGCGACATTTTTC 59.966 34.615 0.00 0.00 0.00 2.29
4469 5178 5.866633 TGTTGTTTTCTCTTGCGACATTTTT 59.133 32.000 0.00 0.00 0.00 1.94
4470 5179 5.406649 TGTTGTTTTCTCTTGCGACATTTT 58.593 33.333 0.00 0.00 0.00 1.82
4471 5180 4.992688 TGTTGTTTTCTCTTGCGACATTT 58.007 34.783 0.00 0.00 0.00 2.32
4473 5182 3.627577 ACTGTTGTTTTCTCTTGCGACAT 59.372 39.130 0.00 0.00 0.00 3.06
4474 5183 3.006940 ACTGTTGTTTTCTCTTGCGACA 58.993 40.909 0.00 0.00 0.00 4.35
4475 5184 3.675467 ACTGTTGTTTTCTCTTGCGAC 57.325 42.857 0.00 0.00 0.00 5.19
4476 5185 4.411327 CAAACTGTTGTTTTCTCTTGCGA 58.589 39.130 0.00 0.00 43.13 5.10
4477 5186 3.000773 GCAAACTGTTGTTTTCTCTTGCG 60.001 43.478 0.00 0.00 43.13 4.85
4478 5187 4.176271 AGCAAACTGTTGTTTTCTCTTGC 58.824 39.130 0.00 0.00 43.13 4.01
4479 5188 5.938883 GAGCAAACTGTTGTTTTCTCTTG 57.061 39.130 11.81 0.00 45.90 3.02
4483 5192 4.601019 CGATGAGCAAACTGTTGTTTTCT 58.399 39.130 0.00 0.00 43.13 2.52
4484 5193 3.180387 GCGATGAGCAAACTGTTGTTTTC 59.820 43.478 0.00 0.00 43.75 2.29
4485 5194 3.115554 GCGATGAGCAAACTGTTGTTTT 58.884 40.909 0.00 0.00 43.75 2.43
4486 5195 2.731217 GCGATGAGCAAACTGTTGTTT 58.269 42.857 0.00 0.00 46.20 2.83
4499 5208 1.294857 TCTCTCACTCTCGCGATGAG 58.705 55.000 25.26 25.26 46.72 2.90
4502 5211 1.202245 GCTTTCTCTCACTCTCGCGAT 60.202 52.381 10.36 0.00 0.00 4.58
4503 5212 0.169230 GCTTTCTCTCACTCTCGCGA 59.831 55.000 9.26 9.26 0.00 5.87
4504 5213 1.131037 CGCTTTCTCTCACTCTCGCG 61.131 60.000 0.00 0.00 0.00 5.87
4505 5214 0.169230 TCGCTTTCTCTCACTCTCGC 59.831 55.000 0.00 0.00 0.00 5.03
4506 5215 1.793714 GCTCGCTTTCTCTCACTCTCG 60.794 57.143 0.00 0.00 0.00 4.04
4507 5216 1.793714 CGCTCGCTTTCTCTCACTCTC 60.794 57.143 0.00 0.00 0.00 3.20
4508 5217 0.170116 CGCTCGCTTTCTCTCACTCT 59.830 55.000 0.00 0.00 0.00 3.24
4509 5218 0.169230 TCGCTCGCTTTCTCTCACTC 59.831 55.000 0.00 0.00 0.00 3.51
4510 5219 0.170116 CTCGCTCGCTTTCTCTCACT 59.830 55.000 0.00 0.00 0.00 3.41
4511 5220 0.169230 TCTCGCTCGCTTTCTCTCAC 59.831 55.000 0.00 0.00 0.00 3.51
4512 5221 0.449786 CTCTCGCTCGCTTTCTCTCA 59.550 55.000 0.00 0.00 0.00 3.27
4513 5222 0.730265 TCTCTCGCTCGCTTTCTCTC 59.270 55.000 0.00 0.00 0.00 3.20
4514 5223 0.732571 CTCTCTCGCTCGCTTTCTCT 59.267 55.000 0.00 0.00 0.00 3.10
4515 5224 0.248458 CCTCTCTCGCTCGCTTTCTC 60.248 60.000 0.00 0.00 0.00 2.87
4516 5225 1.662438 CCCTCTCTCGCTCGCTTTCT 61.662 60.000 0.00 0.00 0.00 2.52
4517 5226 1.226831 CCCTCTCTCGCTCGCTTTC 60.227 63.158 0.00 0.00 0.00 2.62
4535 5244 0.106619 TAAGGCGTCTCTCTCTCCCC 60.107 60.000 0.00 0.00 0.00 4.81
4536 5245 1.134037 TCTAAGGCGTCTCTCTCTCCC 60.134 57.143 0.00 0.00 0.00 4.30
4538 5247 4.911514 AATTCTAAGGCGTCTCTCTCTC 57.088 45.455 0.00 0.00 0.00 3.20
4539 5248 5.068067 GGTTAATTCTAAGGCGTCTCTCTCT 59.932 44.000 0.00 0.00 0.00 3.10
4540 5249 5.163540 TGGTTAATTCTAAGGCGTCTCTCTC 60.164 44.000 0.00 0.00 0.00 3.20
4541 5250 4.710375 TGGTTAATTCTAAGGCGTCTCTCT 59.290 41.667 0.00 0.00 0.00 3.10
4542 5251 5.007385 TGGTTAATTCTAAGGCGTCTCTC 57.993 43.478 0.00 0.00 0.00 3.20
4543 5252 5.615925 ATGGTTAATTCTAAGGCGTCTCT 57.384 39.130 0.00 0.00 0.00 3.10
4544 5253 7.656137 TGAATATGGTTAATTCTAAGGCGTCTC 59.344 37.037 0.00 0.00 34.95 3.36
4545 5254 7.506114 TGAATATGGTTAATTCTAAGGCGTCT 58.494 34.615 0.00 0.00 34.95 4.18
4546 5255 7.724305 TGAATATGGTTAATTCTAAGGCGTC 57.276 36.000 0.00 0.00 34.95 5.19
4547 5256 7.554835 TGTTGAATATGGTTAATTCTAAGGCGT 59.445 33.333 0.00 0.00 34.95 5.68
4548 5257 7.855904 GTGTTGAATATGGTTAATTCTAAGGCG 59.144 37.037 0.00 0.00 34.95 5.52
4549 5258 8.682710 TGTGTTGAATATGGTTAATTCTAAGGC 58.317 33.333 0.00 0.00 34.95 4.35
4582 5291 7.753132 GCCTCGATGTTCACACAAAATAATAAA 59.247 33.333 0.00 0.00 36.16 1.40
4583 5292 7.247728 GCCTCGATGTTCACACAAAATAATAA 58.752 34.615 0.00 0.00 36.16 1.40
4584 5293 6.183360 GGCCTCGATGTTCACACAAAATAATA 60.183 38.462 0.00 0.00 36.16 0.98
4585 5294 5.393027 GGCCTCGATGTTCACACAAAATAAT 60.393 40.000 0.00 0.00 36.16 1.28
4586 5295 4.083003 GGCCTCGATGTTCACACAAAATAA 60.083 41.667 0.00 0.00 36.16 1.40
4587 5296 3.438781 GGCCTCGATGTTCACACAAAATA 59.561 43.478 0.00 0.00 36.16 1.40
4588 5297 2.228822 GGCCTCGATGTTCACACAAAAT 59.771 45.455 0.00 0.00 36.16 1.82
4589 5298 1.606668 GGCCTCGATGTTCACACAAAA 59.393 47.619 0.00 0.00 36.16 2.44
4590 5299 1.234821 GGCCTCGATGTTCACACAAA 58.765 50.000 0.00 0.00 36.16 2.83
4591 5300 0.107643 TGGCCTCGATGTTCACACAA 59.892 50.000 3.32 0.00 36.16 3.33
4592 5301 0.324614 ATGGCCTCGATGTTCACACA 59.675 50.000 3.32 0.00 37.31 3.72
4593 5302 1.009829 GATGGCCTCGATGTTCACAC 58.990 55.000 3.32 0.00 0.00 3.82
4594 5303 3.458872 GATGGCCTCGATGTTCACA 57.541 52.632 3.32 0.00 0.00 3.58
4611 5320 2.009424 CTTCTCATCCTCGCCAGCGA 62.009 60.000 14.77 14.77 46.87 4.93
4612 5321 1.591059 CTTCTCATCCTCGCCAGCG 60.591 63.158 5.50 5.50 41.35 5.18
4613 5322 1.227497 CCTTCTCATCCTCGCCAGC 60.227 63.158 0.00 0.00 0.00 4.85
4614 5323 0.388659 CTCCTTCTCATCCTCGCCAG 59.611 60.000 0.00 0.00 0.00 4.85
4615 5324 1.045350 CCTCCTTCTCATCCTCGCCA 61.045 60.000 0.00 0.00 0.00 5.69
4616 5325 0.757188 TCCTCCTTCTCATCCTCGCC 60.757 60.000 0.00 0.00 0.00 5.54
4617 5326 1.337118 ATCCTCCTTCTCATCCTCGC 58.663 55.000 0.00 0.00 0.00 5.03
4618 5327 4.022416 CACTTATCCTCCTTCTCATCCTCG 60.022 50.000 0.00 0.00 0.00 4.63
4619 5328 4.283212 CCACTTATCCTCCTTCTCATCCTC 59.717 50.000 0.00 0.00 0.00 3.71
4620 5329 4.230455 CCACTTATCCTCCTTCTCATCCT 58.770 47.826 0.00 0.00 0.00 3.24
4621 5330 3.244387 GCCACTTATCCTCCTTCTCATCC 60.244 52.174 0.00 0.00 0.00 3.51
4622 5331 3.389329 TGCCACTTATCCTCCTTCTCATC 59.611 47.826 0.00 0.00 0.00 2.92
4623 5332 3.387962 TGCCACTTATCCTCCTTCTCAT 58.612 45.455 0.00 0.00 0.00 2.90
4624 5333 2.832838 TGCCACTTATCCTCCTTCTCA 58.167 47.619 0.00 0.00 0.00 3.27
4625 5334 3.055094 TGTTGCCACTTATCCTCCTTCTC 60.055 47.826 0.00 0.00 0.00 2.87
4626 5335 2.912956 TGTTGCCACTTATCCTCCTTCT 59.087 45.455 0.00 0.00 0.00 2.85
4627 5336 3.010420 GTGTTGCCACTTATCCTCCTTC 58.990 50.000 0.00 0.00 38.61 3.46
4628 5337 2.375174 TGTGTTGCCACTTATCCTCCTT 59.625 45.455 0.00 0.00 42.34 3.36
4629 5338 1.985159 TGTGTTGCCACTTATCCTCCT 59.015 47.619 0.00 0.00 42.34 3.69
4630 5339 2.489938 TGTGTTGCCACTTATCCTCC 57.510 50.000 0.00 0.00 42.34 4.30
4631 5340 6.318648 TCATATTTGTGTTGCCACTTATCCTC 59.681 38.462 0.00 0.00 42.34 3.71
4632 5341 6.186957 TCATATTTGTGTTGCCACTTATCCT 58.813 36.000 0.00 0.00 42.34 3.24
4633 5342 6.449635 TCATATTTGTGTTGCCACTTATCC 57.550 37.500 0.00 0.00 42.34 2.59
4634 5343 6.418819 GCATCATATTTGTGTTGCCACTTATC 59.581 38.462 0.42 0.00 42.34 1.75
4635 5344 6.275335 GCATCATATTTGTGTTGCCACTTAT 58.725 36.000 0.42 0.00 42.34 1.73
4636 5345 5.649557 GCATCATATTTGTGTTGCCACTTA 58.350 37.500 0.42 0.00 42.34 2.24
4637 5346 4.497300 GCATCATATTTGTGTTGCCACTT 58.503 39.130 0.42 0.00 42.34 3.16
4638 5347 4.114058 GCATCATATTTGTGTTGCCACT 57.886 40.909 0.42 0.00 42.34 4.00
4642 5351 3.365832 CGAGGCATCATATTTGTGTTGC 58.634 45.455 0.00 2.75 41.70 4.17
4643 5352 3.181498 TGCGAGGCATCATATTTGTGTTG 60.181 43.478 0.00 0.00 31.71 3.33
4644 5353 3.016031 TGCGAGGCATCATATTTGTGTT 58.984 40.909 0.00 0.00 31.71 3.32
4645 5354 2.642427 TGCGAGGCATCATATTTGTGT 58.358 42.857 0.00 0.00 31.71 3.72
4646 5355 3.696281 TTGCGAGGCATCATATTTGTG 57.304 42.857 0.00 0.00 38.76 3.33
4647 5356 4.717233 TTTTGCGAGGCATCATATTTGT 57.283 36.364 0.00 0.00 38.76 2.83
4648 5357 7.697352 TTATTTTTGCGAGGCATCATATTTG 57.303 32.000 0.00 0.00 38.76 2.32
4649 5358 8.196771 TCTTTATTTTTGCGAGGCATCATATTT 58.803 29.630 0.00 0.00 38.76 1.40
4650 5359 7.715657 TCTTTATTTTTGCGAGGCATCATATT 58.284 30.769 0.00 0.00 38.76 1.28
4651 5360 7.275888 TCTTTATTTTTGCGAGGCATCATAT 57.724 32.000 0.00 0.00 38.76 1.78
4652 5361 6.691754 TCTTTATTTTTGCGAGGCATCATA 57.308 33.333 0.00 0.00 38.76 2.15
4653 5362 5.581126 TCTTTATTTTTGCGAGGCATCAT 57.419 34.783 0.00 0.00 38.76 2.45
4654 5363 5.182950 TCTTCTTTATTTTTGCGAGGCATCA 59.817 36.000 0.00 0.00 38.76 3.07
4655 5364 5.640732 TCTTCTTTATTTTTGCGAGGCATC 58.359 37.500 0.00 0.00 38.76 3.91
4656 5365 5.643379 TCTTCTTTATTTTTGCGAGGCAT 57.357 34.783 0.00 0.00 38.76 4.40
4657 5366 5.182950 TCATCTTCTTTATTTTTGCGAGGCA 59.817 36.000 0.00 0.00 36.47 4.75
4658 5367 5.640732 TCATCTTCTTTATTTTTGCGAGGC 58.359 37.500 0.00 0.00 0.00 4.70
4659 5368 6.528072 GGTTCATCTTCTTTATTTTTGCGAGG 59.472 38.462 0.00 0.00 0.00 4.63
4660 5369 7.308435 AGGTTCATCTTCTTTATTTTTGCGAG 58.692 34.615 0.00 0.00 0.00 5.03
4661 5370 7.214467 AGGTTCATCTTCTTTATTTTTGCGA 57.786 32.000 0.00 0.00 0.00 5.10
4662 5371 9.573133 AATAGGTTCATCTTCTTTATTTTTGCG 57.427 29.630 0.00 0.00 0.00 4.85
4667 5376 9.533831 ACCACAATAGGTTCATCTTCTTTATTT 57.466 29.630 0.00 0.00 39.34 1.40
4668 5377 9.178758 GACCACAATAGGTTCATCTTCTTTATT 57.821 33.333 0.00 0.00 43.38 1.40
4669 5378 8.552296 AGACCACAATAGGTTCATCTTCTTTAT 58.448 33.333 0.00 0.00 43.38 1.40
4670 5379 7.918076 AGACCACAATAGGTTCATCTTCTTTA 58.082 34.615 0.00 0.00 43.38 1.85
4671 5380 6.784031 AGACCACAATAGGTTCATCTTCTTT 58.216 36.000 0.00 0.00 43.38 2.52
4672 5381 6.380079 AGACCACAATAGGTTCATCTTCTT 57.620 37.500 0.00 0.00 43.38 2.52
4673 5382 6.013379 TCAAGACCACAATAGGTTCATCTTCT 60.013 38.462 0.00 0.00 43.38 2.85
4674 5383 6.173339 TCAAGACCACAATAGGTTCATCTTC 58.827 40.000 0.00 0.00 43.38 2.87
4675 5384 6.126863 TCAAGACCACAATAGGTTCATCTT 57.873 37.500 0.00 0.00 43.38 2.40
4676 5385 5.249393 ACTCAAGACCACAATAGGTTCATCT 59.751 40.000 0.00 0.00 43.38 2.90
4677 5386 5.352569 CACTCAAGACCACAATAGGTTCATC 59.647 44.000 0.00 0.00 43.38 2.92
4678 5387 5.013079 TCACTCAAGACCACAATAGGTTCAT 59.987 40.000 0.00 0.00 43.38 2.57
4679 5388 4.346709 TCACTCAAGACCACAATAGGTTCA 59.653 41.667 0.00 0.00 43.38 3.18
4680 5389 4.894784 TCACTCAAGACCACAATAGGTTC 58.105 43.478 0.00 0.00 43.38 3.62
4681 5390 4.974645 TCACTCAAGACCACAATAGGTT 57.025 40.909 0.00 0.00 43.38 3.50
4682 5391 4.323792 CCATCACTCAAGACCACAATAGGT 60.324 45.833 0.00 0.00 46.82 3.08
4683 5392 4.194640 CCATCACTCAAGACCACAATAGG 58.805 47.826 0.00 0.00 0.00 2.57
4684 5393 4.836825 ACCATCACTCAAGACCACAATAG 58.163 43.478 0.00 0.00 0.00 1.73
4685 5394 4.908601 ACCATCACTCAAGACCACAATA 57.091 40.909 0.00 0.00 0.00 1.90
4686 5395 3.795688 ACCATCACTCAAGACCACAAT 57.204 42.857 0.00 0.00 0.00 2.71
4687 5396 3.213506 CAACCATCACTCAAGACCACAA 58.786 45.455 0.00 0.00 0.00 3.33
4688 5397 2.172505 ACAACCATCACTCAAGACCACA 59.827 45.455 0.00 0.00 0.00 4.17
4689 5398 2.851195 ACAACCATCACTCAAGACCAC 58.149 47.619 0.00 0.00 0.00 4.16
4690 5399 3.118075 TCAACAACCATCACTCAAGACCA 60.118 43.478 0.00 0.00 0.00 4.02
4691 5400 3.476552 TCAACAACCATCACTCAAGACC 58.523 45.455 0.00 0.00 0.00 3.85
4692 5401 4.130118 ACTCAACAACCATCACTCAAGAC 58.870 43.478 0.00 0.00 0.00 3.01
4693 5402 4.422073 ACTCAACAACCATCACTCAAGA 57.578 40.909 0.00 0.00 0.00 3.02
4694 5403 6.483307 TCTTAACTCAACAACCATCACTCAAG 59.517 38.462 0.00 0.00 0.00 3.02
4695 5404 6.353323 TCTTAACTCAACAACCATCACTCAA 58.647 36.000 0.00 0.00 0.00 3.02
4696 5405 5.924356 TCTTAACTCAACAACCATCACTCA 58.076 37.500 0.00 0.00 0.00 3.41
4697 5406 5.992217 ACTCTTAACTCAACAACCATCACTC 59.008 40.000 0.00 0.00 0.00 3.51
4698 5407 5.760253 CACTCTTAACTCAACAACCATCACT 59.240 40.000 0.00 0.00 0.00 3.41
4699 5408 5.527582 ACACTCTTAACTCAACAACCATCAC 59.472 40.000 0.00 0.00 0.00 3.06
4700 5409 5.680619 ACACTCTTAACTCAACAACCATCA 58.319 37.500 0.00 0.00 0.00 3.07
4701 5410 7.387948 ACATACACTCTTAACTCAACAACCATC 59.612 37.037 0.00 0.00 0.00 3.51
4702 5411 7.224297 ACATACACTCTTAACTCAACAACCAT 58.776 34.615 0.00 0.00 0.00 3.55
4703 5412 6.588204 ACATACACTCTTAACTCAACAACCA 58.412 36.000 0.00 0.00 0.00 3.67
4704 5413 7.492352 AACATACACTCTTAACTCAACAACC 57.508 36.000 0.00 0.00 0.00 3.77
4706 5415 9.772973 ACATAACATACACTCTTAACTCAACAA 57.227 29.630 0.00 0.00 0.00 2.83
4707 5416 9.772973 AACATAACATACACTCTTAACTCAACA 57.227 29.630 0.00 0.00 0.00 3.33
4715 5424 9.871238 GGAGAGAAAACATAACATACACTCTTA 57.129 33.333 0.00 0.00 33.34 2.10
4716 5425 7.824779 GGGAGAGAAAACATAACATACACTCTT 59.175 37.037 0.00 0.00 33.34 2.85
4717 5426 7.331791 GGGAGAGAAAACATAACATACACTCT 58.668 38.462 0.00 0.00 35.39 3.24
4718 5427 6.255887 CGGGAGAGAAAACATAACATACACTC 59.744 42.308 0.00 0.00 0.00 3.51
4719 5428 6.106673 CGGGAGAGAAAACATAACATACACT 58.893 40.000 0.00 0.00 0.00 3.55
4720 5429 5.873164 ACGGGAGAGAAAACATAACATACAC 59.127 40.000 0.00 0.00 0.00 2.90
4721 5430 6.045072 ACGGGAGAGAAAACATAACATACA 57.955 37.500 0.00 0.00 0.00 2.29
4722 5431 6.674760 GCAACGGGAGAGAAAACATAACATAC 60.675 42.308 0.00 0.00 0.00 2.39
4723 5432 5.353123 GCAACGGGAGAGAAAACATAACATA 59.647 40.000 0.00 0.00 0.00 2.29
4724 5433 4.156008 GCAACGGGAGAGAAAACATAACAT 59.844 41.667 0.00 0.00 0.00 2.71
4725 5434 3.500680 GCAACGGGAGAGAAAACATAACA 59.499 43.478 0.00 0.00 0.00 2.41
4726 5435 3.500680 TGCAACGGGAGAGAAAACATAAC 59.499 43.478 0.00 0.00 0.00 1.89
4727 5436 3.745799 TGCAACGGGAGAGAAAACATAA 58.254 40.909 0.00 0.00 0.00 1.90
4728 5437 3.410631 TGCAACGGGAGAGAAAACATA 57.589 42.857 0.00 0.00 0.00 2.29
4729 5438 2.270352 TGCAACGGGAGAGAAAACAT 57.730 45.000 0.00 0.00 0.00 2.71
4730 5439 1.673920 GTTGCAACGGGAGAGAAAACA 59.326 47.619 14.90 0.00 0.00 2.83
4731 5440 2.401017 GTTGCAACGGGAGAGAAAAC 57.599 50.000 14.90 0.00 0.00 2.43
4743 5452 4.683334 GAGCCCGTGCGTTGCAAC 62.683 66.667 19.89 19.89 41.47 4.17
4744 5453 4.927782 AGAGCCCGTGCGTTGCAA 62.928 61.111 0.00 0.00 41.47 4.08
4745 5454 4.927782 AAGAGCCCGTGCGTTGCA 62.928 61.111 6.22 0.00 44.33 4.08
4746 5455 3.194272 AAAAGAGCCCGTGCGTTGC 62.194 57.895 0.00 0.00 44.33 4.17
4747 5456 1.370414 CAAAAGAGCCCGTGCGTTG 60.370 57.895 0.00 0.00 44.33 4.10
4748 5457 3.030652 CAAAAGAGCCCGTGCGTT 58.969 55.556 0.00 0.00 44.33 4.84
4749 5458 2.725203 TAGCAAAAGAGCCCGTGCGT 62.725 55.000 0.00 0.00 44.33 5.24
4750 5459 1.573829 TTAGCAAAAGAGCCCGTGCG 61.574 55.000 0.00 0.00 44.33 5.34
4751 5460 0.811281 ATTAGCAAAAGAGCCCGTGC 59.189 50.000 0.00 0.00 37.26 5.34
4752 5461 4.695217 TTTATTAGCAAAAGAGCCCGTG 57.305 40.909 0.00 0.00 34.23 4.94
4753 5462 5.010213 TGTTTTTATTAGCAAAAGAGCCCGT 59.990 36.000 0.00 0.00 34.23 5.28
4754 5463 5.465935 TGTTTTTATTAGCAAAAGAGCCCG 58.534 37.500 0.00 0.00 34.23 6.13
4755 5464 7.095229 CCTTTGTTTTTATTAGCAAAAGAGCCC 60.095 37.037 0.00 0.00 34.23 5.19
4756 5465 7.655732 TCCTTTGTTTTTATTAGCAAAAGAGCC 59.344 33.333 0.00 0.00 34.23 4.70
4757 5466 8.587952 TCCTTTGTTTTTATTAGCAAAAGAGC 57.412 30.769 0.00 0.00 31.61 4.09
4776 5485 4.273480 CCACGGCAGAATATACTTCCTTTG 59.727 45.833 0.00 0.00 0.00 2.77
4794 5503 0.878416 TTTCTTTTCATCGCCCACGG 59.122 50.000 0.00 0.00 40.63 4.94
4796 5505 1.269448 TGCTTTCTTTTCATCGCCCAC 59.731 47.619 0.00 0.00 0.00 4.61
4803 5512 4.527816 TGGCCTACAATGCTTTCTTTTCAT 59.472 37.500 3.32 0.00 0.00 2.57
4805 5514 4.519540 TGGCCTACAATGCTTTCTTTTC 57.480 40.909 3.32 0.00 0.00 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.