Multiple sequence alignment - TraesCS3B01G093100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G093100 chr3B 100.000 4240 0 0 1 4240 62218420 62214181 0.000000e+00 7830.0
1 TraesCS3B01G093100 chr3B 86.818 1502 114 36 1741 3170 62012012 62010523 0.000000e+00 1600.0
2 TraesCS3B01G093100 chr3B 87.744 922 60 21 3170 4074 62010452 62009567 0.000000e+00 1027.0
3 TraesCS3B01G093100 chr3B 91.837 98 8 0 4143 4240 62006524 62006427 2.060000e-28 137.0
4 TraesCS3B01G093100 chr3D 89.442 2652 144 35 596 3170 39303418 39300826 0.000000e+00 3221.0
5 TraesCS3B01G093100 chr3D 87.909 1497 92 32 2311 3770 39208376 39206932 0.000000e+00 1679.0
6 TraesCS3B01G093100 chr3D 95.168 952 35 9 3292 4240 39300766 39299823 0.000000e+00 1493.0
7 TraesCS3B01G093100 chr3D 88.802 509 30 19 1817 2309 39208902 39208405 2.180000e-167 599.0
8 TraesCS3B01G093100 chr3D 86.101 554 49 13 77 616 39303901 39303362 4.760000e-159 571.0
9 TraesCS3B01G093100 chr3D 86.918 451 27 10 3799 4240 39206935 39206508 1.070000e-130 477.0
10 TraesCS3B01G093100 chr3D 96.226 53 2 0 1 53 39303944 39303892 2.100000e-13 87.9
11 TraesCS3B01G093100 chr3A 89.428 1977 118 33 596 2495 50641525 50639563 0.000000e+00 2409.0
12 TraesCS3B01G093100 chr3A 86.876 1783 137 41 2525 4240 50547174 50545422 0.000000e+00 1906.0
13 TraesCS3B01G093100 chr3A 90.958 929 43 22 3294 4216 50638842 50637949 0.000000e+00 1212.0
14 TraesCS3B01G093100 chr3A 88.299 829 50 26 1508 2309 50548184 50547376 0.000000e+00 950.0
15 TraesCS3B01G093100 chr3A 87.763 760 32 25 2526 3254 50639573 50638844 0.000000e+00 832.0
16 TraesCS3B01G093100 chr3A 86.511 556 58 13 75 616 50642021 50641469 2.820000e-166 595.0
17 TraesCS3B01G093100 chr7B 89.135 451 35 6 1550 1999 698630822 698630385 2.230000e-152 549.0
18 TraesCS3B01G093100 chr7B 89.569 441 28 6 1561 1998 684165019 684165444 1.040000e-150 544.0
19 TraesCS3B01G093100 chr6B 89.111 450 35 5 1551 1999 68221069 68221505 8.020000e-152 547.0
20 TraesCS3B01G093100 chr5B 88.444 450 38 5 1551 1999 385249834 385250270 8.070000e-147 531.0
21 TraesCS3B01G093100 chr5B 85.903 454 39 15 1775 2218 598669446 598669884 1.070000e-125 460.0
22 TraesCS3B01G093100 chr5A 87.778 450 41 7 1551 1999 564680197 564679761 8.130000e-142 514.0
23 TraesCS3B01G093100 chr5A 85.385 390 36 14 1775 2157 632224342 632223967 6.650000e-103 385.0
24 TraesCS3B01G093100 chr4A 86.801 447 45 5 1554 1999 661807955 661807522 1.770000e-133 486.0
25 TraesCS3B01G093100 chr4A 83.744 203 33 0 2815 3017 173932155 173931953 4.330000e-45 193.0
26 TraesCS3B01G093100 chr2B 80.275 218 39 4 2814 3028 84817752 84817968 1.220000e-35 161.0
27 TraesCS3B01G093100 chr2A 80.882 204 37 2 2814 3016 54817556 54817354 4.390000e-35 159.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G093100 chr3B 62214181 62218420 4239 True 7830.000000 7830 100.000000 1 4240 1 chr3B.!!$R1 4239
1 TraesCS3B01G093100 chr3B 62006427 62012012 5585 True 921.333333 1600 88.799667 1741 4240 3 chr3B.!!$R2 2499
2 TraesCS3B01G093100 chr3D 39299823 39303944 4121 True 1343.225000 3221 91.734250 1 4240 4 chr3D.!!$R2 4239
3 TraesCS3B01G093100 chr3D 39206508 39208902 2394 True 918.333333 1679 87.876333 1817 4240 3 chr3D.!!$R1 2423
4 TraesCS3B01G093100 chr3A 50545422 50548184 2762 True 1428.000000 1906 87.587500 1508 4240 2 chr3A.!!$R1 2732
5 TraesCS3B01G093100 chr3A 50637949 50642021 4072 True 1262.000000 2409 88.665000 75 4216 4 chr3A.!!$R2 4141

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
678 692 0.108207 GATCTGTGGGGGCATCTGAG 59.892 60.0 0.0 0.0 0.0 3.35 F
959 995 0.178906 TCAGATCCACCACCAGTCCA 60.179 55.0 0.0 0.0 0.0 4.02 F
1790 1860 0.040425 CGTTTCCGCCTTGTCCTTTG 60.040 55.0 0.0 0.0 0.0 2.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1701 1766 0.032912 ATCATGGAAGCATGTGGCCA 60.033 50.000 0.00 0.00 46.5 5.36 R
2521 2667 1.135489 CACAGCAGGCACAATGACATC 60.135 52.381 0.00 0.00 0.0 3.06 R
3268 3540 0.094558 TTAAGATCGCGCGCTGTTTG 59.905 50.000 30.48 13.47 0.0 2.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 2.196925 CGCCCGATCTAGCACCTCT 61.197 63.158 4.91 0.00 0.00 3.69
44 45 4.241590 CTAGCACCTCTAGAAGCTCATG 57.758 50.000 14.99 6.17 46.12 3.07
45 46 2.744760 AGCACCTCTAGAAGCTCATGA 58.255 47.619 7.89 0.00 30.05 3.07
46 47 3.102972 AGCACCTCTAGAAGCTCATGAA 58.897 45.455 7.89 0.00 30.05 2.57
47 48 3.710677 AGCACCTCTAGAAGCTCATGAAT 59.289 43.478 7.89 0.00 30.05 2.57
48 49 4.057432 GCACCTCTAGAAGCTCATGAATC 58.943 47.826 0.00 0.00 0.00 2.52
49 50 4.202243 GCACCTCTAGAAGCTCATGAATCT 60.202 45.833 0.00 3.84 0.00 2.40
50 51 5.531634 CACCTCTAGAAGCTCATGAATCTC 58.468 45.833 8.22 0.23 0.00 2.75
51 52 4.588528 ACCTCTAGAAGCTCATGAATCTCC 59.411 45.833 8.22 0.00 0.00 3.71
52 53 4.834496 CCTCTAGAAGCTCATGAATCTCCT 59.166 45.833 8.22 0.00 0.00 3.69
53 54 6.009589 CCTCTAGAAGCTCATGAATCTCCTA 58.990 44.000 8.22 0.86 0.00 2.94
54 55 6.664816 CCTCTAGAAGCTCATGAATCTCCTAT 59.335 42.308 8.22 0.00 0.00 2.57
55 56 7.178983 CCTCTAGAAGCTCATGAATCTCCTATT 59.821 40.741 8.22 0.00 0.00 1.73
56 57 8.121305 TCTAGAAGCTCATGAATCTCCTATTC 57.879 38.462 8.22 0.00 0.00 1.75
57 58 6.744175 AGAAGCTCATGAATCTCCTATTCA 57.256 37.500 0.00 3.13 41.59 2.57
58 59 7.319052 AGAAGCTCATGAATCTCCTATTCAT 57.681 36.000 7.28 7.28 46.29 2.57
59 60 7.747690 AGAAGCTCATGAATCTCCTATTCATT 58.252 34.615 9.85 0.00 43.84 2.57
60 61 8.219178 AGAAGCTCATGAATCTCCTATTCATTT 58.781 33.333 9.85 3.62 43.84 2.32
61 62 9.499479 GAAGCTCATGAATCTCCTATTCATTTA 57.501 33.333 9.85 2.70 43.84 1.40
63 64 9.669887 AGCTCATGAATCTCCTATTCATTTATC 57.330 33.333 9.85 2.37 43.84 1.75
64 65 9.445878 GCTCATGAATCTCCTATTCATTTATCA 57.554 33.333 9.85 0.00 43.84 2.15
99 100 4.381398 CGAATCTTCTGATCTGACACCACT 60.381 45.833 1.16 0.00 31.51 4.00
104 105 0.909610 TGATCTGACACCACTCCCCC 60.910 60.000 0.00 0.00 0.00 5.40
146 147 6.239176 CCATAGAGGTAGAAGAAGATGACACC 60.239 46.154 0.00 0.00 0.00 4.16
163 164 1.908793 CCGCCCTCCCATATCTCGT 60.909 63.158 0.00 0.00 0.00 4.18
166 167 0.759346 GCCCTCCCATATCTCGTTGT 59.241 55.000 0.00 0.00 0.00 3.32
176 177 2.233305 ATCTCGTTGTACTGGGTCCT 57.767 50.000 0.00 0.00 0.00 3.85
181 182 2.173519 CGTTGTACTGGGTCCTAAGGA 58.826 52.381 0.00 0.00 0.00 3.36
187 188 3.277416 ACTGGGTCCTAAGGAAACTCT 57.723 47.619 0.00 0.00 42.68 3.24
199 200 1.272147 GGAAACTCTGAGCCCCACATT 60.272 52.381 4.19 0.00 0.00 2.71
219 220 1.039068 CGAGCAGAGAGTGGGATGAT 58.961 55.000 0.00 0.00 0.00 2.45
258 259 3.118482 CCTCATGTATGCAGAGTTGAGGT 60.118 47.826 22.68 0.00 40.60 3.85
285 286 2.138179 CCGGCGATTAGGGAAGGGA 61.138 63.158 9.30 0.00 0.00 4.20
286 287 1.481056 CCGGCGATTAGGGAAGGGAT 61.481 60.000 9.30 0.00 0.00 3.85
332 334 4.971125 GCGGAGGCGGTAGATGGC 62.971 72.222 0.00 0.00 0.00 4.40
378 386 9.813080 GAAAAGTGTCTTATAGTTGTTCACATC 57.187 33.333 0.00 0.00 0.00 3.06
409 417 8.028652 TGATGTGACTATATTATCAACCACCA 57.971 34.615 0.00 0.00 0.00 4.17
530 538 3.165058 AGCGTACACATCACATCGAAT 57.835 42.857 0.00 0.00 0.00 3.34
547 561 7.748241 CACATCGAATCCTTTTTCTTCTTCTTC 59.252 37.037 0.00 0.00 0.00 2.87
581 595 7.271511 TCAAGCAATAATTGAGTGTTTGGTTT 58.728 30.769 11.63 0.00 42.50 3.27
583 597 8.397148 CAAGCAATAATTGAGTGTTTGGTTTTT 58.603 29.630 0.00 0.00 39.71 1.94
610 624 8.870160 TTTTTGACAGATAATTGAGTGTTTGG 57.130 30.769 0.00 0.00 0.00 3.28
611 625 7.581213 TTTGACAGATAATTGAGTGTTTGGT 57.419 32.000 0.00 0.00 0.00 3.67
612 626 7.581213 TTGACAGATAATTGAGTGTTTGGTT 57.419 32.000 0.00 0.00 0.00 3.67
613 627 6.969366 TGACAGATAATTGAGTGTTTGGTTG 58.031 36.000 0.00 0.00 0.00 3.77
614 628 6.770303 TGACAGATAATTGAGTGTTTGGTTGA 59.230 34.615 0.00 0.00 0.00 3.18
621 635 5.793026 TTGAGTGTTTGGTTGATTTTTGC 57.207 34.783 0.00 0.00 0.00 3.68
678 692 0.108207 GATCTGTGGGGGCATCTGAG 59.892 60.000 0.00 0.00 0.00 3.35
679 693 0.326904 ATCTGTGGGGGCATCTGAGA 60.327 55.000 0.00 0.00 0.00 3.27
681 695 0.979709 CTGTGGGGGCATCTGAGAGA 60.980 60.000 0.00 0.00 0.00 3.10
682 696 0.547471 TGTGGGGGCATCTGAGAGAA 60.547 55.000 0.00 0.00 0.00 2.87
686 700 2.312741 TGGGGGCATCTGAGAGAAAAAT 59.687 45.455 0.00 0.00 0.00 1.82
716 733 6.589523 GGAGGAGATACGATCATGATTTTCAG 59.410 42.308 10.14 2.53 0.00 3.02
875 911 3.124270 CATTGGCGCCACGTAGCA 61.124 61.111 32.95 14.88 34.54 3.49
959 995 0.178906 TCAGATCCACCACCAGTCCA 60.179 55.000 0.00 0.00 0.00 4.02
976 1016 1.969064 CACCGCGTTCCCATTTCCA 60.969 57.895 4.92 0.00 0.00 3.53
978 1018 1.674322 CCGCGTTCCCATTTCCAGT 60.674 57.895 4.92 0.00 0.00 4.00
989 1029 1.001974 CATTTCCAGTCCACCGACAGA 59.998 52.381 0.00 0.00 41.87 3.41
993 1033 1.745890 CAGTCCACCGACAGACCAA 59.254 57.895 0.00 0.00 41.87 3.67
1014 1054 1.212688 TCAATCATGGAGTTCCCGCAT 59.787 47.619 0.00 0.00 37.93 4.73
1667 1731 2.868331 CGACGACACGCAGGTACG 60.868 66.667 0.00 0.00 39.50 3.67
1701 1766 4.378774 CTCTGCAAGATCGATCCAAGATT 58.621 43.478 21.66 6.41 45.62 2.40
1762 1832 0.324943 AACTTCACACCGGGATCTGG 59.675 55.000 6.32 3.37 0.00 3.86
1790 1860 0.040425 CGTTTCCGCCTTGTCCTTTG 60.040 55.000 0.00 0.00 0.00 2.77
1897 1969 8.465999 GTGGTTGATGGATTTGAATATACACAA 58.534 33.333 0.00 0.00 0.00 3.33
1942 2014 2.543777 TGAAGTACAGCACAAGGGTC 57.456 50.000 0.00 0.00 0.00 4.46
2034 2106 1.134098 CGGCCAATCTCACCCTGTAAT 60.134 52.381 2.24 0.00 0.00 1.89
2045 2117 5.550403 TCTCACCCTGTAATTAACCTCCTTT 59.450 40.000 0.00 0.00 0.00 3.11
2054 2126 8.990163 TGTAATTAACCTCCTTTCTTCAGTTT 57.010 30.769 0.00 0.00 0.00 2.66
2087 2164 7.012327 CCAACTTCTAATTTTGCTATCCGATGA 59.988 37.037 0.00 0.00 0.00 2.92
2088 2165 7.721286 ACTTCTAATTTTGCTATCCGATGAG 57.279 36.000 0.00 0.00 0.00 2.90
2089 2166 7.275920 ACTTCTAATTTTGCTATCCGATGAGT 58.724 34.615 0.00 0.00 0.00 3.41
2094 2171 0.823460 TGCTATCCGATGAGTGTGCA 59.177 50.000 0.00 0.00 0.00 4.57
2095 2172 1.212616 GCTATCCGATGAGTGTGCAC 58.787 55.000 10.75 10.75 0.00 4.57
2187 2291 4.380867 CCACACATTCCAAATGCCTACTTC 60.381 45.833 0.00 0.00 0.00 3.01
2201 2305 4.202295 TGCCTACTTCCTCTGCAATCATAG 60.202 45.833 0.00 0.00 0.00 2.23
2259 2372 4.883585 TGAATGAACAGAAGCACTTTGAGT 59.116 37.500 0.00 0.00 0.00 3.41
2333 2478 3.340814 AAACTAGTCCAGCATGAGTGG 57.659 47.619 8.00 8.00 39.69 4.00
2354 2499 3.448660 GGAATTTCTCCATGTTCTTGGGG 59.551 47.826 5.18 2.21 44.67 4.96
2370 2515 5.570320 TCTTGGGGATAATATTTGCCTAGC 58.430 41.667 0.00 0.00 0.00 3.42
2386 2531 2.234661 CCTAGCAGGTGTCATGTTCAGA 59.765 50.000 0.00 0.00 0.00 3.27
2393 2538 4.509970 CAGGTGTCATGTTCAGAAAACGTA 59.490 41.667 0.00 0.00 0.00 3.57
2510 2656 1.925946 GCACTGTCATGTTCCGCAAAC 60.926 52.381 0.00 0.00 38.43 2.93
2521 2667 4.915704 TGTTCCGCAAACTTTGTAAGAAG 58.084 39.130 3.48 0.00 38.76 2.85
2596 2752 5.549742 TCCATGTGCACATATATCACAGA 57.450 39.130 30.92 14.39 42.98 3.41
2597 2753 5.299949 TCCATGTGCACATATATCACAGAC 58.700 41.667 30.92 0.00 42.98 3.51
2604 2764 6.642950 GTGCACATATATCACAGACTTCTACC 59.357 42.308 13.17 0.00 0.00 3.18
2615 2775 2.897969 AGACTTCTACCGTTGTCCATGT 59.102 45.455 0.00 0.00 0.00 3.21
3023 3216 3.857157 TGCCTGGTGTAAGTTCTTCTT 57.143 42.857 0.00 0.00 39.89 2.52
3054 3252 3.788766 CCTGCGCTTGCCGTGTAC 61.789 66.667 9.73 0.00 39.71 2.90
3058 3256 1.011968 TGCGCTTGCCGTGTACTAAG 61.012 55.000 9.73 0.00 39.71 2.18
3062 3260 2.685100 GCTTGCCGTGTACTAAGTTCT 58.315 47.619 0.00 0.00 0.00 3.01
3092 3290 6.174720 TCCAGTTCAGTTTCACTAGAACAT 57.825 37.500 15.43 4.93 38.02 2.71
3110 3308 9.844790 CTAGAACATTTTGATTAGTTCATTGCA 57.155 29.630 0.00 0.00 42.01 4.08
3149 3347 3.248602 GCAAATAGACATACCCGCTCAAG 59.751 47.826 0.00 0.00 0.00 3.02
3155 3353 2.544267 GACATACCCGCTCAAGCATAAC 59.456 50.000 2.50 0.00 42.21 1.89
3156 3354 2.093181 ACATACCCGCTCAAGCATAACA 60.093 45.455 2.50 0.00 42.21 2.41
3198 3470 3.326747 ACACGAGCAAGGTATTTCTGTC 58.673 45.455 0.00 0.00 0.00 3.51
3199 3471 2.345641 CACGAGCAAGGTATTTCTGTCG 59.654 50.000 0.00 0.00 0.00 4.35
3228 3500 4.141367 TGGGGACTGATTTGTGTCTTGTAA 60.141 41.667 0.00 0.00 34.01 2.41
3241 3513 4.641989 GTGTCTTGTAATGATGGCAGGAAT 59.358 41.667 0.00 0.00 0.00 3.01
3248 3520 1.395635 TGATGGCAGGAATGATGCAC 58.604 50.000 0.00 0.00 45.68 4.57
3253 3525 0.744874 GCAGGAATGATGCACATGCT 59.255 50.000 5.31 0.00 43.31 3.79
3254 3526 1.951602 GCAGGAATGATGCACATGCTA 59.048 47.619 5.31 0.00 43.31 3.49
3255 3527 2.287427 GCAGGAATGATGCACATGCTAC 60.287 50.000 5.31 0.13 43.31 3.58
3256 3528 2.946990 CAGGAATGATGCACATGCTACA 59.053 45.455 5.31 5.81 42.66 2.74
3257 3529 3.003378 CAGGAATGATGCACATGCTACAG 59.997 47.826 5.31 0.00 42.66 2.74
3258 3530 2.947652 GGAATGATGCACATGCTACAGT 59.052 45.455 5.31 4.68 42.66 3.55
3259 3531 3.379372 GGAATGATGCACATGCTACAGTT 59.621 43.478 5.31 3.01 42.66 3.16
3260 3532 4.142315 GGAATGATGCACATGCTACAGTTT 60.142 41.667 5.31 0.00 42.66 2.66
3261 3533 3.835378 TGATGCACATGCTACAGTTTG 57.165 42.857 5.31 0.00 42.66 2.93
3262 3534 3.148412 TGATGCACATGCTACAGTTTGT 58.852 40.909 5.31 0.00 42.66 2.83
3263 3535 3.569277 TGATGCACATGCTACAGTTTGTT 59.431 39.130 5.31 0.00 42.66 2.83
3264 3536 3.352554 TGCACATGCTACAGTTTGTTG 57.647 42.857 5.31 0.00 42.66 3.33
3265 3537 2.034432 TGCACATGCTACAGTTTGTTGG 59.966 45.455 5.31 0.00 42.66 3.77
3266 3538 2.034558 GCACATGCTACAGTTTGTTGGT 59.965 45.455 0.00 0.00 38.21 3.67
3267 3539 3.490761 GCACATGCTACAGTTTGTTGGTT 60.491 43.478 0.00 0.00 38.21 3.67
3268 3540 4.290155 CACATGCTACAGTTTGTTGGTTC 58.710 43.478 0.00 0.00 0.00 3.62
3269 3541 3.951037 ACATGCTACAGTTTGTTGGTTCA 59.049 39.130 0.00 0.00 0.00 3.18
3270 3542 4.400884 ACATGCTACAGTTTGTTGGTTCAA 59.599 37.500 0.00 0.00 0.00 2.69
3271 3543 5.105554 ACATGCTACAGTTTGTTGGTTCAAA 60.106 36.000 0.00 0.00 35.36 2.69
3277 3549 1.634702 TTTGTTGGTTCAAACAGCGC 58.365 45.000 0.00 0.00 40.93 5.92
3278 3550 0.524392 TTGTTGGTTCAAACAGCGCG 60.524 50.000 0.00 0.00 40.93 6.86
3279 3551 2.025441 TTGGTTCAAACAGCGCGC 59.975 55.556 26.66 26.66 0.00 6.86
3280 3552 3.798639 TTGGTTCAAACAGCGCGCG 62.799 57.895 28.44 28.44 0.00 6.86
3281 3553 4.007940 GGTTCAAACAGCGCGCGA 62.008 61.111 37.18 13.97 0.00 5.87
3282 3554 2.173382 GTTCAAACAGCGCGCGAT 59.827 55.556 37.18 28.60 0.00 4.58
3283 3555 1.859135 GTTCAAACAGCGCGCGATC 60.859 57.895 37.18 17.71 0.00 3.69
3284 3556 2.027073 TTCAAACAGCGCGCGATCT 61.027 52.632 37.18 20.06 0.00 2.75
3285 3557 1.565156 TTCAAACAGCGCGCGATCTT 61.565 50.000 37.18 20.34 0.00 2.40
3286 3558 0.734597 TCAAACAGCGCGCGATCTTA 60.735 50.000 37.18 3.75 0.00 2.10
3287 3559 0.094558 CAAACAGCGCGCGATCTTAA 59.905 50.000 37.18 0.00 0.00 1.85
3288 3560 1.006832 AAACAGCGCGCGATCTTAAT 58.993 45.000 37.18 3.75 0.00 1.40
3289 3561 1.847818 AACAGCGCGCGATCTTAATA 58.152 45.000 37.18 0.00 0.00 0.98
3290 3562 1.847818 ACAGCGCGCGATCTTAATAA 58.152 45.000 37.18 0.00 0.00 1.40
3304 3614 8.979574 GCGATCTTAATAATAAGCAAGTACTGT 58.020 33.333 0.00 0.00 38.73 3.55
3361 3671 3.004315 AGCGGTATGTCTGTTTTGTTTGG 59.996 43.478 0.00 0.00 0.00 3.28
3363 3673 3.305064 CGGTATGTCTGTTTTGTTTGGGG 60.305 47.826 0.00 0.00 0.00 4.96
3370 3680 5.068460 TGTCTGTTTTGTTTGGGGAGTTATG 59.932 40.000 0.00 0.00 0.00 1.90
3376 3686 8.744652 TGTTTTGTTTGGGGAGTTATGTATATG 58.255 33.333 0.00 0.00 0.00 1.78
3377 3687 7.889873 TTTGTTTGGGGAGTTATGTATATGG 57.110 36.000 0.00 0.00 0.00 2.74
3407 3718 7.500141 ACTTGTAATGATGGATTTATTTGGCC 58.500 34.615 0.00 0.00 0.00 5.36
3447 3758 2.954989 TGCATGAACAAACCAGTGCTTA 59.045 40.909 0.00 0.00 33.95 3.09
3492 3803 3.558006 CCGTGTGACATGTTTGTGAACTA 59.442 43.478 0.00 0.00 35.79 2.24
3493 3804 4.514506 CGTGTGACATGTTTGTGAACTAC 58.485 43.478 0.00 0.00 35.79 2.73
3547 3858 4.585955 TTGCTGTAACGGAGATCTATCC 57.414 45.455 0.00 0.00 35.88 2.59
3561 3878 6.407525 GGAGATCTATCCATATAGTTGTGGCC 60.408 46.154 0.00 0.00 39.34 5.36
3623 3940 6.960431 CGTGCCAAAAATGCTTTTATAAATGG 59.040 34.615 11.76 8.85 32.85 3.16
3846 4194 6.359352 CCTTTTAAAAATGGTTTCGCATTTGC 59.641 34.615 1.66 0.00 32.11 3.68
3858 4207 6.292596 GGTTTCGCATTTGCTTGAATTTGTTA 60.293 34.615 0.51 0.00 39.32 2.41
3977 4329 1.420138 GAAGTGTTGAAGGTCCCTCCA 59.580 52.381 0.00 0.00 39.02 3.86
3981 4333 2.361119 GTGTTGAAGGTCCCTCCAAAAC 59.639 50.000 0.00 0.00 39.02 2.43
4009 4361 9.750125 AAAAAGAAATGTACTCAAGGTCAATTC 57.250 29.630 0.00 0.00 0.00 2.17
4168 7503 3.713858 TGCCATCTGCCAAATAAATCG 57.286 42.857 0.00 0.00 40.16 3.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 7.846101 TGAATAGGAGATTCATGAGCTTCTA 57.154 36.000 14.57 14.57 33.55 2.10
69 70 5.412904 GTCAGATCAGAAGATTCGGGTTTTT 59.587 40.000 0.00 0.00 33.72 1.94
70 71 4.938226 GTCAGATCAGAAGATTCGGGTTTT 59.062 41.667 0.00 0.00 33.72 2.43
71 72 4.020218 TGTCAGATCAGAAGATTCGGGTTT 60.020 41.667 0.00 0.00 33.72 3.27
72 73 3.515502 TGTCAGATCAGAAGATTCGGGTT 59.484 43.478 0.00 0.00 33.72 4.11
73 74 3.099905 TGTCAGATCAGAAGATTCGGGT 58.900 45.455 0.00 0.00 33.72 5.28
83 84 1.561643 GGGAGTGGTGTCAGATCAGA 58.438 55.000 0.00 0.00 0.00 3.27
146 147 0.319900 CAACGAGATATGGGAGGGCG 60.320 60.000 0.00 0.00 0.00 6.13
163 164 4.237018 AGTTTCCTTAGGACCCAGTACAA 58.763 43.478 0.00 0.00 0.00 2.41
166 167 4.094476 CAGAGTTTCCTTAGGACCCAGTA 58.906 47.826 0.00 0.00 0.00 2.74
176 177 1.628846 GTGGGGCTCAGAGTTTCCTTA 59.371 52.381 0.00 0.00 0.00 2.69
181 182 1.611673 CGAATGTGGGGCTCAGAGTTT 60.612 52.381 0.00 0.00 0.00 2.66
187 188 2.268920 GCTCGAATGTGGGGCTCA 59.731 61.111 0.00 0.00 0.00 4.26
199 200 0.034089 TCATCCCACTCTCTGCTCGA 60.034 55.000 0.00 0.00 0.00 4.04
241 242 1.204704 CCGACCTCAACTCTGCATACA 59.795 52.381 0.00 0.00 0.00 2.29
270 271 0.951040 CGCATCCCTTCCCTAATCGC 60.951 60.000 0.00 0.00 0.00 4.58
271 272 0.320771 CCGCATCCCTTCCCTAATCG 60.321 60.000 0.00 0.00 0.00 3.34
285 286 2.202932 CTAGCTCGCAACCCGCAT 60.203 61.111 0.00 0.00 42.60 4.73
286 287 4.451150 CCTAGCTCGCAACCCGCA 62.451 66.667 0.00 0.00 42.60 5.69
324 326 1.300542 GCTCTGCGAGGCCATCTAC 60.301 63.158 5.01 0.00 0.00 2.59
325 327 1.329913 TTGCTCTGCGAGGCCATCTA 61.330 55.000 5.01 0.00 0.00 1.98
326 328 2.189191 TTTGCTCTGCGAGGCCATCT 62.189 55.000 5.01 0.00 0.00 2.90
327 329 1.746615 TTTGCTCTGCGAGGCCATC 60.747 57.895 5.01 0.00 0.00 3.51
328 330 2.042831 GTTTGCTCTGCGAGGCCAT 61.043 57.895 5.01 0.00 0.00 4.40
329 331 2.669569 GTTTGCTCTGCGAGGCCA 60.670 61.111 5.01 0.00 0.00 5.36
330 332 1.589716 AATGTTTGCTCTGCGAGGCC 61.590 55.000 0.00 0.00 0.00 5.19
331 333 0.242017 AAATGTTTGCTCTGCGAGGC 59.758 50.000 7.50 0.00 0.00 4.70
332 334 2.030893 TCAAAATGTTTGCTCTGCGAGG 60.031 45.455 7.50 0.00 0.00 4.63
333 335 3.272439 TCAAAATGTTTGCTCTGCGAG 57.728 42.857 0.00 1.80 0.00 5.03
335 337 4.268405 ACTTTTCAAAATGTTTGCTCTGCG 59.732 37.500 0.00 0.00 0.00 5.18
378 386 8.715998 GTTGATAATATAGTCACATCAAGCCAG 58.284 37.037 0.00 0.00 36.56 4.85
398 406 9.996554 CAGTAAAGATATGTATGGTGGTTGATA 57.003 33.333 0.00 0.00 0.00 2.15
409 417 8.482943 TGGTGTAACAGCAGTAAAGATATGTAT 58.517 33.333 0.00 0.00 39.98 2.29
422 430 2.877786 TGTGACATTGGTGTAACAGCAG 59.122 45.455 0.00 0.00 43.36 4.24
423 431 2.924421 TGTGACATTGGTGTAACAGCA 58.076 42.857 0.00 0.00 43.36 4.41
530 538 7.954666 TTTCAAGGAAGAAGAAGAAAAAGGA 57.045 32.000 0.00 0.00 0.00 3.36
585 599 8.474025 ACCAAACACTCAATTATCTGTCAAAAA 58.526 29.630 0.00 0.00 0.00 1.94
586 600 8.006298 ACCAAACACTCAATTATCTGTCAAAA 57.994 30.769 0.00 0.00 0.00 2.44
587 601 7.581213 ACCAAACACTCAATTATCTGTCAAA 57.419 32.000 0.00 0.00 0.00 2.69
588 602 7.284261 TCAACCAAACACTCAATTATCTGTCAA 59.716 33.333 0.00 0.00 0.00 3.18
589 603 6.770303 TCAACCAAACACTCAATTATCTGTCA 59.230 34.615 0.00 0.00 0.00 3.58
590 604 7.202016 TCAACCAAACACTCAATTATCTGTC 57.798 36.000 0.00 0.00 0.00 3.51
591 605 7.765695 ATCAACCAAACACTCAATTATCTGT 57.234 32.000 0.00 0.00 0.00 3.41
592 606 9.480053 AAAATCAACCAAACACTCAATTATCTG 57.520 29.630 0.00 0.00 0.00 2.90
595 609 8.558700 GCAAAAATCAACCAAACACTCAATTAT 58.441 29.630 0.00 0.00 0.00 1.28
596 610 7.768120 AGCAAAAATCAACCAAACACTCAATTA 59.232 29.630 0.00 0.00 0.00 1.40
597 611 6.598850 AGCAAAAATCAACCAAACACTCAATT 59.401 30.769 0.00 0.00 0.00 2.32
598 612 6.037391 CAGCAAAAATCAACCAAACACTCAAT 59.963 34.615 0.00 0.00 0.00 2.57
599 613 5.350914 CAGCAAAAATCAACCAAACACTCAA 59.649 36.000 0.00 0.00 0.00 3.02
600 614 4.869297 CAGCAAAAATCAACCAAACACTCA 59.131 37.500 0.00 0.00 0.00 3.41
601 615 5.108517 TCAGCAAAAATCAACCAAACACTC 58.891 37.500 0.00 0.00 0.00 3.51
602 616 5.083533 TCAGCAAAAATCAACCAAACACT 57.916 34.783 0.00 0.00 0.00 3.55
603 617 4.260334 GCTCAGCAAAAATCAACCAAACAC 60.260 41.667 0.00 0.00 0.00 3.32
604 618 3.870419 GCTCAGCAAAAATCAACCAAACA 59.130 39.130 0.00 0.00 0.00 2.83
605 619 4.025480 CAGCTCAGCAAAAATCAACCAAAC 60.025 41.667 0.00 0.00 0.00 2.93
606 620 4.121317 CAGCTCAGCAAAAATCAACCAAA 58.879 39.130 0.00 0.00 0.00 3.28
607 621 3.493002 CCAGCTCAGCAAAAATCAACCAA 60.493 43.478 0.00 0.00 0.00 3.67
608 622 2.036217 CCAGCTCAGCAAAAATCAACCA 59.964 45.455 0.00 0.00 0.00 3.67
609 623 2.036346 ACCAGCTCAGCAAAAATCAACC 59.964 45.455 0.00 0.00 0.00 3.77
610 624 3.375782 ACCAGCTCAGCAAAAATCAAC 57.624 42.857 0.00 0.00 0.00 3.18
611 625 4.144297 AGTACCAGCTCAGCAAAAATCAA 58.856 39.130 0.00 0.00 0.00 2.57
612 626 3.754965 AGTACCAGCTCAGCAAAAATCA 58.245 40.909 0.00 0.00 0.00 2.57
613 627 4.216257 TCAAGTACCAGCTCAGCAAAAATC 59.784 41.667 0.00 0.00 0.00 2.17
614 628 4.022849 GTCAAGTACCAGCTCAGCAAAAAT 60.023 41.667 0.00 0.00 0.00 1.82
621 635 3.883830 ATCAGTCAAGTACCAGCTCAG 57.116 47.619 0.00 0.00 0.00 3.35
678 692 5.232414 CGTATCTCCTCCGTTGATTTTTCTC 59.768 44.000 0.00 0.00 0.00 2.87
679 693 5.105473 TCGTATCTCCTCCGTTGATTTTTCT 60.105 40.000 0.00 0.00 0.00 2.52
681 695 5.080969 TCGTATCTCCTCCGTTGATTTTT 57.919 39.130 0.00 0.00 0.00 1.94
682 696 4.730949 TCGTATCTCCTCCGTTGATTTT 57.269 40.909 0.00 0.00 0.00 1.82
686 700 2.927028 TGATCGTATCTCCTCCGTTGA 58.073 47.619 0.00 0.00 0.00 3.18
951 987 4.309950 GGAACGCGGTGGACTGGT 62.310 66.667 12.47 0.00 0.00 4.00
955 991 1.918868 GAAATGGGAACGCGGTGGAC 61.919 60.000 12.47 0.00 0.00 4.02
959 995 1.674322 CTGGAAATGGGAACGCGGT 60.674 57.895 12.47 1.91 0.00 5.68
976 1016 0.608640 GATTGGTCTGTCGGTGGACT 59.391 55.000 0.00 0.00 43.79 3.85
978 1018 1.052617 TTGATTGGTCTGTCGGTGGA 58.947 50.000 0.00 0.00 0.00 4.02
989 1029 3.635591 GGGAACTCCATGATTGATTGGT 58.364 45.455 0.00 0.00 37.91 3.67
993 1033 1.212688 TGCGGGAACTCCATGATTGAT 59.787 47.619 0.00 0.00 37.91 2.57
1667 1731 1.466167 CTTGCAGAGGTGTATGTGTGC 59.534 52.381 0.00 0.00 0.00 4.57
1701 1766 0.032912 ATCATGGAAGCATGTGGCCA 60.033 50.000 0.00 0.00 46.50 5.36
1777 1847 2.415893 CCAATTAGCAAAGGACAAGGCG 60.416 50.000 0.00 0.00 0.00 5.52
1790 1860 5.991606 GGATTATTGCTTTTCCCCAATTAGC 59.008 40.000 0.00 0.00 33.93 3.09
1854 1926 3.157881 ACCACACGATCAGAGAAGAAGA 58.842 45.455 0.00 0.00 0.00 2.87
1855 1927 3.584406 ACCACACGATCAGAGAAGAAG 57.416 47.619 0.00 0.00 0.00 2.85
1869 1941 7.915397 GTGTATATTCAAATCCATCAACCACAC 59.085 37.037 0.00 0.00 0.00 3.82
1897 1969 2.430248 TGATCCAGTGCTGCATCATT 57.570 45.000 5.27 0.00 0.00 2.57
1942 2014 1.141858 GGGTAGCCTTCCTCATCCTTG 59.858 57.143 2.95 0.00 0.00 3.61
2034 2106 7.751646 TGGATAAACTGAAGAAAGGAGGTTAA 58.248 34.615 0.00 0.00 0.00 2.01
2045 2117 7.020827 AGAAGTTGGATGGATAAACTGAAGA 57.979 36.000 0.00 0.00 34.46 2.87
2054 2126 9.866655 ATAGCAAAATTAGAAGTTGGATGGATA 57.133 29.630 0.00 0.00 0.00 2.59
2087 2164 2.154798 ATCTACCGTGCGTGCACACT 62.155 55.000 23.26 10.55 46.47 3.55
2088 2165 1.683790 GATCTACCGTGCGTGCACAC 61.684 60.000 23.26 7.98 46.47 3.82
2089 2166 1.445410 GATCTACCGTGCGTGCACA 60.445 57.895 23.26 5.18 46.47 4.57
2094 2171 2.686405 TCATGTAAGATCTACCGTGCGT 59.314 45.455 0.00 0.00 0.00 5.24
2095 2172 3.349488 TCATGTAAGATCTACCGTGCG 57.651 47.619 0.00 0.00 0.00 5.34
2259 2372 2.884012 CACAGGTCACACTGCCAATAAA 59.116 45.455 0.00 0.00 42.21 1.40
2309 2423 5.986135 CCACTCATGCTGGACTAGTTTATAC 59.014 44.000 0.00 0.00 0.00 1.47
2333 2478 4.344104 TCCCCAAGAACATGGAGAAATTC 58.656 43.478 0.00 0.00 43.54 2.17
2343 2488 6.384603 AGGCAAATATTATCCCCAAGAACAT 58.615 36.000 0.00 0.00 0.00 2.71
2354 2499 5.997746 TGACACCTGCTAGGCAAATATTATC 59.002 40.000 2.50 0.00 39.63 1.75
2370 2515 3.312421 ACGTTTTCTGAACATGACACCTG 59.688 43.478 0.00 0.00 0.00 4.00
2386 2531 9.263538 TGACACTGACATAATTTACTACGTTTT 57.736 29.630 0.00 0.00 0.00 2.43
2424 2569 6.751514 ATGGTAATGTGAAAATCGTAGCAA 57.248 33.333 0.00 0.00 0.00 3.91
2466 2612 4.451096 ACATGAACACACGTGGAAGTATTC 59.549 41.667 21.57 13.24 46.67 1.75
2510 2656 6.072286 AGGCACAATGACATCTTCTTACAAAG 60.072 38.462 0.00 0.00 0.00 2.77
2521 2667 1.135489 CACAGCAGGCACAATGACATC 60.135 52.381 0.00 0.00 0.00 3.06
2596 2752 2.870435 GCACATGGACAACGGTAGAAGT 60.870 50.000 0.00 0.00 0.00 3.01
2597 2753 1.732259 GCACATGGACAACGGTAGAAG 59.268 52.381 0.00 0.00 0.00 2.85
2615 2775 8.210946 ACCATATTATTTTAGAGCTAGTGTGCA 58.789 33.333 0.00 0.00 34.99 4.57
3023 3216 3.090037 AGCGCAGGAGTAGAGTAGAAAA 58.910 45.455 11.47 0.00 0.00 2.29
3054 3252 4.816385 TGAACTGGAGCAACAAGAACTTAG 59.184 41.667 0.00 0.00 0.00 2.18
3058 3256 2.945668 ACTGAACTGGAGCAACAAGAAC 59.054 45.455 0.00 0.00 0.00 3.01
3062 3260 3.128589 GTGAAACTGAACTGGAGCAACAA 59.871 43.478 0.00 0.00 0.00 2.83
3092 3290 8.715191 AACAAACTGCAATGAACTAATCAAAA 57.285 26.923 1.23 0.00 42.54 2.44
3104 3302 5.107607 GCATGAGAAGAAACAAACTGCAATG 60.108 40.000 0.00 0.00 0.00 2.82
3110 3308 8.078596 GTCTATTTGCATGAGAAGAAACAAACT 58.921 33.333 0.00 0.00 30.60 2.66
3155 3353 6.090493 GTGTCATGTACTAGCATGCATCTATG 59.910 42.308 21.98 15.24 44.20 2.23
3156 3354 6.162079 GTGTCATGTACTAGCATGCATCTAT 58.838 40.000 21.98 0.16 44.20 1.98
3168 3366 2.823747 ACCTTGCTCGTGTCATGTACTA 59.176 45.455 0.00 0.00 0.00 1.82
3169 3367 1.618837 ACCTTGCTCGTGTCATGTACT 59.381 47.619 0.00 0.00 0.00 2.73
3170 3368 2.080286 ACCTTGCTCGTGTCATGTAC 57.920 50.000 0.00 0.00 0.00 2.90
3198 3470 2.029110 ACAAATCAGTCCCCAAATTGCG 60.029 45.455 0.00 0.00 0.00 4.85
3199 3471 3.244181 ACACAAATCAGTCCCCAAATTGC 60.244 43.478 0.00 0.00 0.00 3.56
3211 3483 6.032094 GCCATCATTACAAGACACAAATCAG 58.968 40.000 0.00 0.00 0.00 2.90
3228 3500 1.961394 GTGCATCATTCCTGCCATCAT 59.039 47.619 0.00 0.00 38.89 2.45
3241 3513 3.148412 ACAAACTGTAGCATGTGCATCA 58.852 40.909 7.83 5.08 45.16 3.07
3248 3520 4.566545 TGAACCAACAAACTGTAGCATG 57.433 40.909 0.00 0.00 0.00 4.06
3258 3530 1.634702 GCGCTGTTTGAACCAACAAA 58.365 45.000 0.00 0.00 37.41 2.83
3259 3531 0.524392 CGCGCTGTTTGAACCAACAA 60.524 50.000 5.56 0.00 0.00 2.83
3260 3532 1.063327 CGCGCTGTTTGAACCAACA 59.937 52.632 5.56 0.00 0.00 3.33
3261 3533 2.292916 GCGCGCTGTTTGAACCAAC 61.293 57.895 26.67 0.00 0.00 3.77
3262 3534 2.025441 GCGCGCTGTTTGAACCAA 59.975 55.556 26.67 0.00 0.00 3.67
3263 3535 4.306471 CGCGCGCTGTTTGAACCA 62.306 61.111 30.48 0.00 0.00 3.67
3264 3536 3.308878 ATCGCGCGCTGTTTGAACC 62.309 57.895 30.48 0.00 0.00 3.62
3265 3537 1.859135 GATCGCGCGCTGTTTGAAC 60.859 57.895 30.48 13.30 0.00 3.18
3266 3538 1.565156 AAGATCGCGCGCTGTTTGAA 61.565 50.000 30.48 5.24 0.00 2.69
3267 3539 0.734597 TAAGATCGCGCGCTGTTTGA 60.735 50.000 30.48 18.88 0.00 2.69
3268 3540 0.094558 TTAAGATCGCGCGCTGTTTG 59.905 50.000 30.48 13.47 0.00 2.93
3269 3541 1.006832 ATTAAGATCGCGCGCTGTTT 58.993 45.000 30.48 19.02 0.00 2.83
3270 3542 1.847818 TATTAAGATCGCGCGCTGTT 58.152 45.000 30.48 23.31 0.00 3.16
3271 3543 1.847818 TTATTAAGATCGCGCGCTGT 58.152 45.000 30.48 17.60 0.00 4.40
3272 3544 4.559560 CTTATTATTAAGATCGCGCGCTG 58.440 43.478 30.48 22.06 37.59 5.18
3273 3545 3.060895 GCTTATTATTAAGATCGCGCGCT 59.939 43.478 30.48 17.80 37.59 5.92
3274 3546 3.181534 TGCTTATTATTAAGATCGCGCGC 60.182 43.478 27.95 23.91 37.59 6.86
3275 3547 4.561959 TGCTTATTATTAAGATCGCGCG 57.438 40.909 26.76 26.76 37.59 6.86
3276 3548 5.916969 ACTTGCTTATTATTAAGATCGCGC 58.083 37.500 0.00 0.00 37.59 6.86
3277 3549 8.156553 CAGTACTTGCTTATTATTAAGATCGCG 58.843 37.037 0.00 0.00 37.59 5.87
3278 3550 8.979574 ACAGTACTTGCTTATTATTAAGATCGC 58.020 33.333 8.28 0.00 37.59 4.58
3288 3560 9.378551 CCAGAAACATACAGTACTTGCTTATTA 57.621 33.333 0.00 0.00 0.00 0.98
3289 3561 8.100791 TCCAGAAACATACAGTACTTGCTTATT 58.899 33.333 0.00 0.00 0.00 1.40
3290 3562 7.620880 TCCAGAAACATACAGTACTTGCTTAT 58.379 34.615 0.00 0.00 0.00 1.73
3304 3614 7.416213 CGCCATCCTTTTTATTCCAGAAACATA 60.416 37.037 0.00 0.00 0.00 2.29
3347 3657 5.068591 ACATAACTCCCCAAACAAAACAGAC 59.931 40.000 0.00 0.00 0.00 3.51
3361 3671 8.157476 ACAAGTTCATCCATATACATAACTCCC 58.843 37.037 0.00 0.00 0.00 4.30
3370 3680 9.725019 TCCATCATTACAAGTTCATCCATATAC 57.275 33.333 0.00 0.00 0.00 1.47
3403 3714 3.973305 TCCATCACACATAATCTAGGCCA 59.027 43.478 5.01 0.00 0.00 5.36
3407 3718 6.877322 TCATGCATCCATCACACATAATCTAG 59.123 38.462 0.00 0.00 0.00 2.43
3547 3858 7.615582 ATTGAATATCGGCCACAACTATATG 57.384 36.000 2.24 0.00 0.00 1.78
3561 3878 3.809832 ACCTTGAGCCGAATTGAATATCG 59.190 43.478 0.00 3.79 38.74 2.92
3885 4236 2.289882 TGCACCTCAAAGATCTCACCAG 60.290 50.000 0.00 0.00 0.00 4.00
3957 4308 1.420138 TGGAGGGACCTTCAACACTTC 59.580 52.381 5.89 0.00 39.86 3.01
3958 4309 1.518367 TGGAGGGACCTTCAACACTT 58.482 50.000 5.89 0.00 39.86 3.16
3959 4310 1.518367 TTGGAGGGACCTTCAACACT 58.482 50.000 8.01 0.00 36.69 3.55
3977 4329 8.318412 ACCTTGAGTACATTTCTTTTTGGTTTT 58.682 29.630 0.00 0.00 0.00 2.43
3981 4333 7.038154 TGACCTTGAGTACATTTCTTTTTGG 57.962 36.000 0.00 0.00 0.00 3.28
4168 7503 5.039333 GGCATCTCACATCAAATTTACTGC 58.961 41.667 0.00 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.