Multiple sequence alignment - TraesCS3B01G084500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G084500 chr3B 100.000 6140 0 0 1546 7685 53221946 53215807 0.000000e+00 11339.0
1 TraesCS3B01G084500 chr3B 100.000 1337 0 0 1 1337 53223491 53222155 0.000000e+00 2470.0
2 TraesCS3B01G084500 chr3B 84.762 1575 175 24 4426 5953 53356229 53354673 0.000000e+00 1519.0
3 TraesCS3B01G084500 chr3B 80.831 1059 153 16 278 1329 53359149 53358134 0.000000e+00 785.0
4 TraesCS3B01G084500 chr3B 88.646 229 25 1 2616 2843 53358072 53357844 2.110000e-70 278.0
5 TraesCS3B01G084500 chr3B 83.214 280 27 12 3568 3844 53356825 53356563 9.970000e-59 239.0
6 TraesCS3B01G084500 chr3B 88.298 188 18 2 3325 3510 53357126 53356941 1.000000e-53 222.0
7 TraesCS3B01G084500 chr3B 100.000 66 0 0 1802 1867 53221640 53221575 1.050000e-23 122.0
8 TraesCS3B01G084500 chr3B 100.000 66 0 0 1852 1917 53221690 53221625 1.050000e-23 122.0
9 TraesCS3B01G084500 chr3D 92.497 3532 145 44 3343 6832 30413444 30409991 0.000000e+00 4944.0
10 TraesCS3B01G084500 chr3D 80.083 2410 302 79 4426 6752 30427933 30430247 0.000000e+00 1628.0
11 TraesCS3B01G084500 chr3D 84.499 1716 192 27 4426 6095 30676464 30674777 0.000000e+00 1628.0
12 TraesCS3B01G084500 chr3D 92.557 1048 68 6 291 1337 30415166 30414128 0.000000e+00 1495.0
13 TraesCS3B01G084500 chr3D 91.126 924 50 11 397 1318 30418542 30417649 0.000000e+00 1223.0
14 TraesCS3B01G084500 chr3D 94.768 669 22 7 2614 3274 30414098 30413435 0.000000e+00 1029.0
15 TraesCS3B01G084500 chr3D 89.005 764 37 10 6915 7670 30409970 30409246 0.000000e+00 902.0
16 TraesCS3B01G084500 chr3D 81.492 1059 146 17 278 1329 30679387 30678372 0.000000e+00 824.0
17 TraesCS3B01G084500 chr3D 73.496 1596 306 88 4388 5916 31435111 31436656 5.360000e-136 496.0
18 TraesCS3B01G084500 chr3D 84.361 454 50 15 2883 3323 30425400 30425845 7.130000e-115 425.0
19 TraesCS3B01G084500 chr3D 78.032 569 78 24 6203 6736 30674716 30674160 1.610000e-81 315.0
20 TraesCS3B01G084500 chr3D 89.520 229 23 1 2616 2843 30678310 30678082 9.760000e-74 289.0
21 TraesCS3B01G084500 chr3D 88.298 188 18 2 3325 3510 30677363 30677178 1.000000e-53 222.0
22 TraesCS3B01G084500 chr3D 95.455 110 5 0 295 404 30418930 30418821 7.930000e-40 176.0
23 TraesCS3B01G084500 chr3D 86.364 66 7 2 205 270 30415570 30415507 3.850000e-08 71.3
24 TraesCS3B01G084500 chr3D 85.507 69 8 2 205 273 30416042 30415976 3.850000e-08 71.3
25 TraesCS3B01G084500 chr3A 93.627 3201 121 23 3689 6853 42798870 42795717 0.000000e+00 4704.0
26 TraesCS3B01G084500 chr3A 91.996 3261 147 44 3659 6853 42368689 42365477 0.000000e+00 4471.0
27 TraesCS3B01G084500 chr3A 80.883 2401 301 66 4426 6739 42381281 42383610 0.000000e+00 1746.0
28 TraesCS3B01G084500 chr3A 93.989 1098 43 8 4070 5166 43291009 43289934 0.000000e+00 1640.0
29 TraesCS3B01G084500 chr3A 93.989 1098 43 8 4070 5166 43874378 43873303 0.000000e+00 1640.0
30 TraesCS3B01G084500 chr3A 93.416 1048 59 6 291 1337 43293364 43292326 0.000000e+00 1544.0
31 TraesCS3B01G084500 chr3A 92.308 1014 47 16 295 1307 42371289 42370306 0.000000e+00 1411.0
32 TraesCS3B01G084500 chr3A 91.004 1056 58 8 2616 3637 42799936 42798884 0.000000e+00 1389.0
33 TraesCS3B01G084500 chr3A 94.286 910 49 2 429 1337 43876602 43875695 0.000000e+00 1389.0
34 TraesCS3B01G084500 chr3A 91.049 1039 76 11 2639 3666 42370304 42369272 0.000000e+00 1387.0
35 TraesCS3B01G084500 chr3A 87.511 1153 91 23 205 1337 42801088 42799969 0.000000e+00 1282.0
36 TraesCS3B01G084500 chr3A 95.366 669 18 7 2614 3274 43292296 43291633 0.000000e+00 1051.0
37 TraesCS3B01G084500 chr3A 95.366 669 18 7 2614 3274 43875665 43875002 0.000000e+00 1051.0
38 TraesCS3B01G084500 chr3A 90.237 758 52 12 6084 6832 43871674 43870930 0.000000e+00 970.0
39 TraesCS3B01G084500 chr3A 90.106 758 53 12 6084 6832 43288807 43288063 0.000000e+00 965.0
40 TraesCS3B01G084500 chr3A 89.133 773 44 9 6899 7670 42365458 42364725 0.000000e+00 926.0
41 TraesCS3B01G084500 chr3A 90.469 640 33 13 3343 3979 43875011 43874397 0.000000e+00 819.0
42 TraesCS3B01G084500 chr3A 90.312 640 34 13 3343 3979 43291642 43291028 0.000000e+00 813.0
43 TraesCS3B01G084500 chr3A 81.944 864 119 12 473 1329 42378330 42379163 0.000000e+00 697.0
44 TraesCS3B01G084500 chr3A 73.638 1597 302 86 4388 5916 51770844 51769299 2.470000e-139 507.0
45 TraesCS3B01G084500 chr3A 92.953 298 21 0 1570 1867 746141020 746141317 1.180000e-117 435.0
46 TraesCS3B01G084500 chr3A 84.293 382 44 11 2883 3252 42379542 42379919 7.330000e-95 359.0
47 TraesCS3B01G084500 chr3A 90.625 224 21 0 2620 2843 42379230 42379453 1.620000e-76 298.0
48 TraesCS3B01G084500 chr3A 83.032 277 29 10 3568 3841 42380463 42380724 1.290000e-57 235.0
49 TraesCS3B01G084500 chr3A 88.372 86 7 1 6900 6985 43288047 43287965 4.910000e-17 100.0
50 TraesCS3B01G084500 chr3A 88.372 86 7 1 6900 6985 43870914 43870832 4.910000e-17 100.0
51 TraesCS3B01G084500 chr3A 85.507 69 8 2 205 273 43293841 43293775 3.850000e-08 71.3
52 TraesCS3B01G084500 chrUn 95.308 1300 32 4 4438 5724 406953640 406952357 0.000000e+00 2036.0
53 TraesCS3B01G084500 chrUn 95.231 1300 33 4 4438 5724 406952172 406950889 0.000000e+00 2030.0
54 TraesCS3B01G084500 chrUn 93.416 1048 60 5 291 1337 332581875 332582914 0.000000e+00 1544.0
55 TraesCS3B01G084500 chrUn 95.366 669 18 7 2614 3274 332582944 332583607 0.000000e+00 1051.0
56 TraesCS3B01G084500 chrUn 97.495 519 13 0 5206 5724 472518170 472518688 0.000000e+00 887.0
57 TraesCS3B01G084500 chrUn 89.377 546 51 6 2072 2612 321125568 321125025 0.000000e+00 680.0
58 TraesCS3B01G084500 chrUn 89.377 546 51 6 2072 2612 321128886 321128343 0.000000e+00 680.0
59 TraesCS3B01G084500 chrUn 89.377 546 51 6 2072 2612 336388841 336389384 0.000000e+00 680.0
60 TraesCS3B01G084500 chrUn 89.868 454 20 11 3343 3794 332583598 332584027 1.870000e-155 560.0
61 TraesCS3B01G084500 chrUn 84.979 486 42 15 1561 2045 83676379 83676834 1.510000e-126 464.0
62 TraesCS3B01G084500 chrUn 86.364 66 7 2 205 270 332581469 332581532 3.850000e-08 71.3
63 TraesCS3B01G084500 chr4B 94.652 804 19 8 1837 2617 34538615 34539417 0.000000e+00 1225.0
64 TraesCS3B01G084500 chr4B 97.826 92 2 0 1776 1867 34538604 34538695 7.980000e-35 159.0
65 TraesCS3B01G084500 chr7D 94.423 789 28 4 1845 2618 555077501 555078288 0.000000e+00 1199.0
66 TraesCS3B01G084500 chr7D 89.677 310 20 8 1570 1867 555077264 555077573 1.210000e-102 385.0
67 TraesCS3B01G084500 chr7D 90.547 201 17 1 1561 1761 83866848 83866650 1.640000e-66 265.0
68 TraesCS3B01G084500 chr1D 92.965 796 40 6 1837 2619 342220129 342220921 0.000000e+00 1146.0
69 TraesCS3B01G084500 chr1D 92.834 307 22 0 1561 1867 342219903 342220209 5.470000e-121 446.0
70 TraesCS3B01G084500 chr6A 92.917 720 35 4 1918 2621 1432453 1431734 0.000000e+00 1033.0
71 TraesCS3B01G084500 chr6D 89.909 773 48 6 1875 2617 365457587 365458359 0.000000e+00 968.0
72 TraesCS3B01G084500 chr6D 89.967 299 22 1 1569 1867 365457339 365457629 5.630000e-101 379.0
73 TraesCS3B01G084500 chr4D 87.705 610 53 8 2037 2628 504010514 504009909 0.000000e+00 691.0
74 TraesCS3B01G084500 chr7A 84.979 486 42 14 1561 2045 727004910 727005365 1.510000e-126 464.0
75 TraesCS3B01G084500 chr4A 92.628 312 10 1 1845 2143 78157062 78157373 3.290000e-118 436.0
76 TraesCS3B01G084500 chr4A 88.125 320 25 8 1561 1867 532598878 532598559 1.220000e-97 368.0
77 TraesCS3B01G084500 chr4A 87.048 332 14 15 1895 2203 150831475 150831800 1.590000e-91 348.0
78 TraesCS3B01G084500 chr4A 85.429 350 23 6 1845 2166 532598631 532598282 9.550000e-89 339.0
79 TraesCS3B01G084500 chr4A 86.817 311 28 8 1570 1867 78156824 78157134 1.240000e-87 335.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G084500 chr3B 53215807 53223491 7684 True 3513.250000 11339 100.000000 1 7685 4 chr3B.!!$R1 7684
1 TraesCS3B01G084500 chr3B 53354673 53359149 4476 True 608.600000 1519 85.150200 278 5953 5 chr3B.!!$R2 5675
2 TraesCS3B01G084500 chr3D 30409246 30418930 9684 True 1238.950000 4944 90.909875 205 7670 8 chr3D.!!$R1 7465
3 TraesCS3B01G084500 chr3D 30425400 30430247 4847 False 1026.500000 1628 82.222000 2883 6752 2 chr3D.!!$F2 3869
4 TraesCS3B01G084500 chr3D 30674160 30679387 5227 True 655.600000 1628 84.368200 278 6736 5 chr3D.!!$R2 6458
5 TraesCS3B01G084500 chr3D 31435111 31436656 1545 False 496.000000 496 73.496000 4388 5916 1 chr3D.!!$F1 1528
6 TraesCS3B01G084500 chr3A 42795717 42801088 5371 True 2458.333333 4704 90.714000 205 6853 3 chr3A.!!$R3 6648
7 TraesCS3B01G084500 chr3A 42364725 42371289 6564 True 2048.750000 4471 91.121500 295 7670 4 chr3A.!!$R2 7375
8 TraesCS3B01G084500 chr3A 43870832 43876602 5770 True 994.833333 1640 92.119833 429 6985 6 chr3A.!!$R5 6556
9 TraesCS3B01G084500 chr3A 43287965 43293841 5876 True 883.471429 1640 91.009714 205 6985 7 chr3A.!!$R4 6780
10 TraesCS3B01G084500 chr3A 42378330 42383610 5280 False 667.000000 1746 84.155400 473 6739 5 chr3A.!!$F2 6266
11 TraesCS3B01G084500 chr3A 51769299 51770844 1545 True 507.000000 507 73.638000 4388 5916 1 chr3A.!!$R1 1528
12 TraesCS3B01G084500 chrUn 406950889 406953640 2751 True 2033.000000 2036 95.269500 4438 5724 2 chrUn.!!$R2 1286
13 TraesCS3B01G084500 chrUn 472518170 472518688 518 False 887.000000 887 97.495000 5206 5724 1 chrUn.!!$F3 518
14 TraesCS3B01G084500 chrUn 332581469 332584027 2558 False 806.575000 1544 91.253500 205 3794 4 chrUn.!!$F4 3589
15 TraesCS3B01G084500 chrUn 321125025 321128886 3861 True 680.000000 680 89.377000 2072 2612 2 chrUn.!!$R1 540
16 TraesCS3B01G084500 chrUn 336388841 336389384 543 False 680.000000 680 89.377000 2072 2612 1 chrUn.!!$F2 540
17 TraesCS3B01G084500 chr4B 34538604 34539417 813 False 692.000000 1225 96.239000 1776 2617 2 chr4B.!!$F1 841
18 TraesCS3B01G084500 chr7D 555077264 555078288 1024 False 792.000000 1199 92.050000 1570 2618 2 chr7D.!!$F1 1048
19 TraesCS3B01G084500 chr1D 342219903 342220921 1018 False 796.000000 1146 92.899500 1561 2619 2 chr1D.!!$F1 1058
20 TraesCS3B01G084500 chr6A 1431734 1432453 719 True 1033.000000 1033 92.917000 1918 2621 1 chr6A.!!$R1 703
21 TraesCS3B01G084500 chr6D 365457339 365458359 1020 False 673.500000 968 89.938000 1569 2617 2 chr6D.!!$F1 1048
22 TraesCS3B01G084500 chr4D 504009909 504010514 605 True 691.000000 691 87.705000 2037 2628 1 chr4D.!!$R1 591
23 TraesCS3B01G084500 chr4A 78156824 78157373 549 False 385.500000 436 89.722500 1570 2143 2 chr4A.!!$F2 573
24 TraesCS3B01G084500 chr4A 532598282 532598878 596 True 353.500000 368 86.777000 1561 2166 2 chr4A.!!$R1 605

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
167 168 0.100682 TGATCCACGTTCGCTAGAGC 59.899 55.000 0.00 0.00 37.78 4.09 F
173 174 0.388649 ACGTTCGCTAGAGCCAACAG 60.389 55.000 11.69 7.32 41.23 3.16 F
405 3890 0.746659 GCCACTGCTTGTCTGGTTTT 59.253 50.000 0.00 0.00 33.53 2.43 F
1752 5297 0.322322 AAAATCGTCCACGTGGCCTA 59.678 50.000 30.25 11.66 40.80 3.93 F
2522 9495 1.479730 AGGGACGAAAAGTATCCGGTC 59.520 52.381 0.00 0.00 32.90 4.79 F
3432 10684 1.067295 TTCCAGGAAGCTGACCACAT 58.933 50.000 11.89 0.00 0.00 3.21 F
4677 13765 0.465097 GGCACCAGGACTCATGGATG 60.465 60.000 16.68 11.28 40.51 3.51 F
5956 15117 0.179189 GTATGCAGGTGTCTTTGCGC 60.179 55.000 0.00 0.00 43.13 6.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1621 5165 1.070289 GAGTGGTTTCGGAGTTGAGGT 59.930 52.381 0.00 0.0 0.00 3.85 R
1727 5272 2.410730 CCACGTGGACGATTTTAGTCAC 59.589 50.000 31.31 0.0 43.02 3.67 R
1933 5552 2.642139 CACCAGATGCAACATTGACC 57.358 50.000 0.00 0.0 0.00 4.02 R
2656 9632 0.740737 ACAGTGAGCCAAGCACAAAC 59.259 50.000 0.00 0.0 38.70 2.93 R
3477 10735 0.872021 CGGCTACTGATGAGCGGAAC 60.872 60.000 0.00 0.0 41.42 3.62 R
5072 14163 2.825205 AGCCAATGCAACAACACTTTC 58.175 42.857 0.00 0.0 41.13 2.62 R
6117 15929 1.302511 GTCGGCACAACCACAGGAT 60.303 57.895 0.00 0.0 39.03 3.24 R
7082 16943 0.324943 GCTACTCAACTTGGCCCTCA 59.675 55.000 0.00 0.0 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 1.513622 GGTTCTCCGAGCTGTCTCC 59.486 63.158 0.00 0.00 35.94 3.71
23 24 1.251527 GGTTCTCCGAGCTGTCTCCA 61.252 60.000 0.00 0.00 35.94 3.86
24 25 0.820871 GTTCTCCGAGCTGTCTCCAT 59.179 55.000 0.00 0.00 35.94 3.41
25 26 1.107114 TTCTCCGAGCTGTCTCCATC 58.893 55.000 0.00 0.00 35.94 3.51
26 27 0.753479 TCTCCGAGCTGTCTCCATCC 60.753 60.000 0.00 0.00 35.94 3.51
27 28 2.069465 CTCCGAGCTGTCTCCATCCG 62.069 65.000 0.00 0.00 35.94 4.18
29 30 2.107953 GAGCTGTCTCCATCCGGC 59.892 66.667 0.00 0.00 33.19 6.13
30 31 3.453070 GAGCTGTCTCCATCCGGCC 62.453 68.421 0.00 0.00 33.32 6.13
31 32 4.899239 GCTGTCTCCATCCGGCCG 62.899 72.222 21.04 21.04 0.00 6.13
32 33 4.899239 CTGTCTCCATCCGGCCGC 62.899 72.222 22.85 3.47 0.00 6.53
46 47 2.436646 CCGCGAGTTCTGGGCATT 60.437 61.111 8.23 0.00 0.00 3.56
47 48 2.753966 CCGCGAGTTCTGGGCATTG 61.754 63.158 8.23 0.00 0.00 2.82
48 49 2.753966 CGCGAGTTCTGGGCATTGG 61.754 63.158 0.00 0.00 0.00 3.16
49 50 1.377202 GCGAGTTCTGGGCATTGGA 60.377 57.895 0.00 0.00 0.00 3.53
50 51 0.749454 GCGAGTTCTGGGCATTGGAT 60.749 55.000 0.00 0.00 0.00 3.41
51 52 1.755179 CGAGTTCTGGGCATTGGATT 58.245 50.000 0.00 0.00 0.00 3.01
52 53 2.094675 CGAGTTCTGGGCATTGGATTT 58.905 47.619 0.00 0.00 0.00 2.17
53 54 2.493278 CGAGTTCTGGGCATTGGATTTT 59.507 45.455 0.00 0.00 0.00 1.82
54 55 3.674138 CGAGTTCTGGGCATTGGATTTTG 60.674 47.826 0.00 0.00 0.00 2.44
56 57 0.531657 TCTGGGCATTGGATTTTGCG 59.468 50.000 0.00 0.00 39.78 4.85
57 58 0.460635 CTGGGCATTGGATTTTGCGG 60.461 55.000 0.00 0.00 39.78 5.69
58 59 1.190833 TGGGCATTGGATTTTGCGGT 61.191 50.000 0.00 0.00 39.78 5.68
59 60 0.820871 GGGCATTGGATTTTGCGGTA 59.179 50.000 0.00 0.00 39.78 4.02
60 61 1.412343 GGGCATTGGATTTTGCGGTAT 59.588 47.619 0.00 0.00 39.78 2.73
61 62 2.472816 GGCATTGGATTTTGCGGTATG 58.527 47.619 0.00 0.00 39.78 2.39
63 64 3.374745 GCATTGGATTTTGCGGTATGAG 58.625 45.455 0.00 0.00 0.00 2.90
64 65 3.374745 CATTGGATTTTGCGGTATGAGC 58.625 45.455 0.00 0.00 0.00 4.26
65 66 2.418368 TGGATTTTGCGGTATGAGCT 57.582 45.000 0.00 0.00 35.28 4.09
66 67 2.722094 TGGATTTTGCGGTATGAGCTT 58.278 42.857 0.00 0.00 35.28 3.74
67 68 2.682856 TGGATTTTGCGGTATGAGCTTC 59.317 45.455 0.00 0.00 35.28 3.86
68 69 2.945668 GGATTTTGCGGTATGAGCTTCT 59.054 45.455 0.00 0.00 35.28 2.85
69 70 3.378427 GGATTTTGCGGTATGAGCTTCTT 59.622 43.478 0.00 0.00 35.28 2.52
72 73 5.950758 TTTTGCGGTATGAGCTTCTTTTA 57.049 34.783 0.00 0.00 35.28 1.52
73 74 6.509418 TTTTGCGGTATGAGCTTCTTTTAT 57.491 33.333 0.00 0.00 35.28 1.40
74 75 5.734855 TTGCGGTATGAGCTTCTTTTATC 57.265 39.130 0.00 0.00 35.28 1.75
75 76 4.127171 TGCGGTATGAGCTTCTTTTATCC 58.873 43.478 0.00 0.00 35.28 2.59
76 77 4.127171 GCGGTATGAGCTTCTTTTATCCA 58.873 43.478 0.00 0.00 0.00 3.41
78 79 5.239525 GCGGTATGAGCTTCTTTTATCCAAT 59.760 40.000 0.00 0.00 0.00 3.16
79 80 6.662616 CGGTATGAGCTTCTTTTATCCAATG 58.337 40.000 0.00 0.00 0.00 2.82
80 81 6.483307 CGGTATGAGCTTCTTTTATCCAATGA 59.517 38.462 0.00 0.00 0.00 2.57
82 83 8.854117 GGTATGAGCTTCTTTTATCCAATGATT 58.146 33.333 0.00 0.00 32.18 2.57
85 86 7.934457 TGAGCTTCTTTTATCCAATGATTAGC 58.066 34.615 0.00 0.00 32.18 3.09
86 87 7.776969 TGAGCTTCTTTTATCCAATGATTAGCT 59.223 33.333 0.00 0.00 36.29 3.32
88 89 7.776969 AGCTTCTTTTATCCAATGATTAGCTGA 59.223 33.333 0.00 0.00 34.07 4.26
89 90 8.408601 GCTTCTTTTATCCAATGATTAGCTGAA 58.591 33.333 0.00 0.00 32.18 3.02
90 91 9.727627 CTTCTTTTATCCAATGATTAGCTGAAC 57.272 33.333 0.00 0.00 32.18 3.18
91 92 8.225603 TCTTTTATCCAATGATTAGCTGAACC 57.774 34.615 0.00 0.00 32.18 3.62
92 93 6.959639 TTTATCCAATGATTAGCTGAACCC 57.040 37.500 0.00 0.00 32.18 4.11
95 96 2.091665 CCAATGATTAGCTGAACCCCCT 60.092 50.000 0.00 0.00 0.00 4.79
97 98 1.213296 TGATTAGCTGAACCCCCTCC 58.787 55.000 0.00 0.00 0.00 4.30
98 99 0.474614 GATTAGCTGAACCCCCTCCC 59.525 60.000 0.00 0.00 0.00 4.30
99 100 0.994050 ATTAGCTGAACCCCCTCCCC 60.994 60.000 0.00 0.00 0.00 4.81
100 101 2.132946 TTAGCTGAACCCCCTCCCCT 62.133 60.000 0.00 0.00 0.00 4.79
101 102 2.547123 TAGCTGAACCCCCTCCCCTC 62.547 65.000 0.00 0.00 0.00 4.30
102 103 2.456840 CTGAACCCCCTCCCCTCT 59.543 66.667 0.00 0.00 0.00 3.69
104 105 0.846870 CTGAACCCCCTCCCCTCTTT 60.847 60.000 0.00 0.00 0.00 2.52
106 107 0.784495 GAACCCCCTCCCCTCTTTTT 59.216 55.000 0.00 0.00 0.00 1.94
132 133 7.105241 ACTTAGGATCAATTGATTTCCTTGC 57.895 36.000 27.63 12.53 35.69 4.01
133 134 4.644103 AGGATCAATTGATTTCCTTGCG 57.356 40.909 21.57 0.00 31.33 4.85
134 135 3.382546 AGGATCAATTGATTTCCTTGCGG 59.617 43.478 21.57 0.00 31.33 5.69
136 137 2.170166 TCAATTGATTTCCTTGCGGCT 58.830 42.857 3.38 0.00 0.00 5.52
139 140 4.219507 TCAATTGATTTCCTTGCGGCTAAA 59.780 37.500 3.38 0.00 0.00 1.85
140 141 5.105392 TCAATTGATTTCCTTGCGGCTAAAT 60.105 36.000 3.38 2.51 0.00 1.40
141 142 3.781079 TGATTTCCTTGCGGCTAAATG 57.219 42.857 0.00 0.00 0.00 2.32
143 144 3.953612 TGATTTCCTTGCGGCTAAATGAT 59.046 39.130 0.00 0.00 0.00 2.45
146 147 3.781079 TCCTTGCGGCTAAATGATTTG 57.219 42.857 0.00 0.00 0.00 2.32
147 148 3.088532 TCCTTGCGGCTAAATGATTTGT 58.911 40.909 0.00 0.00 0.00 2.83
148 149 3.509575 TCCTTGCGGCTAAATGATTTGTT 59.490 39.130 0.00 0.00 0.00 2.83
149 150 3.613737 CCTTGCGGCTAAATGATTTGTTG 59.386 43.478 0.00 0.00 0.00 3.33
150 151 4.484236 CTTGCGGCTAAATGATTTGTTGA 58.516 39.130 0.00 0.00 0.00 3.18
151 152 4.717233 TGCGGCTAAATGATTTGTTGAT 57.283 36.364 0.00 0.00 0.00 2.57
152 153 4.671377 TGCGGCTAAATGATTTGTTGATC 58.329 39.130 0.00 0.00 0.00 2.92
153 154 4.044426 GCGGCTAAATGATTTGTTGATCC 58.956 43.478 0.00 0.00 0.00 3.36
154 155 4.439974 GCGGCTAAATGATTTGTTGATCCA 60.440 41.667 0.00 0.00 0.00 3.41
155 156 5.036737 CGGCTAAATGATTTGTTGATCCAC 58.963 41.667 0.00 0.00 0.00 4.02
156 157 5.036737 GGCTAAATGATTTGTTGATCCACG 58.963 41.667 0.00 0.00 0.00 4.94
157 158 5.393027 GGCTAAATGATTTGTTGATCCACGT 60.393 40.000 0.00 0.00 0.00 4.49
158 159 6.092748 GCTAAATGATTTGTTGATCCACGTT 58.907 36.000 0.00 0.00 0.00 3.99
159 160 6.251376 GCTAAATGATTTGTTGATCCACGTTC 59.749 38.462 0.00 0.00 0.00 3.95
160 161 3.804518 TGATTTGTTGATCCACGTTCG 57.195 42.857 0.00 0.00 0.00 3.95
161 162 2.095969 TGATTTGTTGATCCACGTTCGC 60.096 45.455 0.00 0.00 0.00 4.70
162 163 1.588674 TTTGTTGATCCACGTTCGCT 58.411 45.000 0.00 0.00 0.00 4.93
163 164 2.442212 TTGTTGATCCACGTTCGCTA 57.558 45.000 0.00 0.00 0.00 4.26
164 165 1.990799 TGTTGATCCACGTTCGCTAG 58.009 50.000 0.00 0.00 0.00 3.42
165 166 1.542472 TGTTGATCCACGTTCGCTAGA 59.458 47.619 0.00 0.00 0.00 2.43
166 167 2.186076 GTTGATCCACGTTCGCTAGAG 58.814 52.381 0.00 0.00 0.00 2.43
167 168 0.100682 TGATCCACGTTCGCTAGAGC 59.899 55.000 0.00 0.00 37.78 4.09
168 169 0.595310 GATCCACGTTCGCTAGAGCC 60.595 60.000 0.00 0.00 37.91 4.70
171 172 1.352156 CCACGTTCGCTAGAGCCAAC 61.352 60.000 2.30 2.30 38.49 3.77
173 174 0.388649 ACGTTCGCTAGAGCCAACAG 60.389 55.000 11.69 7.32 41.23 3.16
176 177 2.479730 CGTTCGCTAGAGCCAACAGTAT 60.480 50.000 11.69 0.00 41.23 2.12
177 178 3.522553 GTTCGCTAGAGCCAACAGTATT 58.477 45.455 7.08 0.00 40.93 1.89
179 180 3.782046 TCGCTAGAGCCAACAGTATTTC 58.218 45.455 0.00 0.00 37.91 2.17
183 184 5.178797 GCTAGAGCCAACAGTATTTCTCAA 58.821 41.667 0.00 0.00 34.31 3.02
184 185 5.819901 GCTAGAGCCAACAGTATTTCTCAAT 59.180 40.000 0.00 0.00 34.31 2.57
185 186 6.317391 GCTAGAGCCAACAGTATTTCTCAATT 59.683 38.462 0.00 0.00 34.31 2.32
186 187 7.148171 GCTAGAGCCAACAGTATTTCTCAATTT 60.148 37.037 0.00 0.00 34.31 1.82
188 189 8.814038 AGAGCCAACAGTATTTCTCAATTTAT 57.186 30.769 0.00 0.00 0.00 1.40
189 190 9.247861 AGAGCCAACAGTATTTCTCAATTTATT 57.752 29.630 0.00 0.00 0.00 1.40
191 192 9.860898 AGCCAACAGTATTTCTCAATTTATTTC 57.139 29.630 0.00 0.00 0.00 2.17
192 193 9.087424 GCCAACAGTATTTCTCAATTTATTTCC 57.913 33.333 0.00 0.00 0.00 3.13
236 2921 5.906113 TTGTAACCAAAACTCTGCTTTGA 57.094 34.783 0.00 0.00 36.12 2.69
238 2923 6.463995 TGTAACCAAAACTCTGCTTTGATT 57.536 33.333 0.00 0.00 36.12 2.57
239 2924 6.272318 TGTAACCAAAACTCTGCTTTGATTG 58.728 36.000 0.00 0.00 36.12 2.67
240 2925 5.343307 AACCAAAACTCTGCTTTGATTGT 57.657 34.783 0.00 0.00 36.12 2.71
242 2927 6.463995 ACCAAAACTCTGCTTTGATTGTAA 57.536 33.333 0.00 0.00 36.12 2.41
243 2928 7.054491 ACCAAAACTCTGCTTTGATTGTAAT 57.946 32.000 0.00 0.00 36.12 1.89
244 2929 7.147976 ACCAAAACTCTGCTTTGATTGTAATC 58.852 34.615 0.00 0.00 36.12 1.75
329 3814 3.808728 TGGAAATATGAAGCGAGAAGGG 58.191 45.455 0.00 0.00 0.00 3.95
405 3890 0.746659 GCCACTGCTTGTCTGGTTTT 59.253 50.000 0.00 0.00 33.53 2.43
449 3948 4.923871 TCTTCTGCAACTTACGATCAGAAC 59.076 41.667 0.00 0.00 38.43 3.01
451 3950 4.486090 TCTGCAACTTACGATCAGAACTC 58.514 43.478 0.00 0.00 31.62 3.01
462 3961 5.403246 ACGATCAGAACTCTGTTGTATGAC 58.597 41.667 6.61 0.00 44.12 3.06
540 4039 0.893447 AGGAATTTGGCAGCTCAAGC 59.107 50.000 0.00 0.00 42.49 4.01
652 4151 8.437360 TGATGGTGATTATAAACACTAGCTTG 57.563 34.615 21.77 0.00 35.56 4.01
671 4170 9.807649 CTAGCTTGGCAAAATTTTATCTATGTT 57.192 29.630 2.44 1.01 0.00 2.71
731 4230 2.549754 ACCATCTTGTGCAGAAAAGACG 59.450 45.455 8.22 1.70 35.34 4.18
886 4400 6.487668 GCCAACTTTCTTTTTGTAGTACCCTA 59.512 38.462 0.00 0.00 0.00 3.53
979 4495 6.405842 GGCTATATACTTGTTGCCTTGCTTTT 60.406 38.462 0.00 0.00 37.58 2.27
1061 4578 8.330466 TCCTACGATTTGAAATACAATGTTGT 57.670 30.769 3.64 3.64 44.86 3.32
1086 4603 1.016627 TCAATATCGCTTGCTGCCAC 58.983 50.000 0.00 0.00 38.78 5.01
1150 4667 4.344102 AGTCTCACAGTAAAGTAGTTGCCA 59.656 41.667 0.00 0.00 0.00 4.92
1200 4717 1.302949 GGCCACAGCTGGGATGTTA 59.697 57.895 20.22 0.00 38.13 2.41
1621 5165 9.445878 AACTCTATCGATGGTATAGAAATCGTA 57.554 33.333 8.54 4.16 42.83 3.43
1641 5185 1.070289 ACCTCAACTCCGAAACCACTC 59.930 52.381 0.00 0.00 0.00 3.51
1691 5235 0.813184 TACTTTTCGTCCCTCGCGAT 59.187 50.000 10.36 0.00 38.21 4.58
1727 5272 0.729140 GTACGACGTGTACCCGGTTG 60.729 60.000 11.56 0.00 46.39 3.77
1752 5297 0.322322 AAAATCGTCCACGTGGCCTA 59.678 50.000 30.25 11.66 40.80 3.93
1766 5311 3.058914 CGTGGCCTAGTTTTGACTGAAAG 60.059 47.826 3.32 0.00 42.29 2.62
1866 5485 5.299028 TCAAATGTGACAGTAAATGTGCAGT 59.701 36.000 0.00 0.00 44.17 4.40
1867 5486 6.484977 TCAAATGTGACAGTAAATGTGCAGTA 59.515 34.615 0.00 0.00 44.17 2.74
1868 5487 6.875948 AATGTGACAGTAAATGTGCAGTAA 57.124 33.333 0.00 0.00 44.17 2.24
1869 5488 7.452880 AATGTGACAGTAAATGTGCAGTAAT 57.547 32.000 0.00 0.00 44.17 1.89
1870 5489 8.560355 AATGTGACAGTAAATGTGCAGTAATA 57.440 30.769 0.00 0.00 44.17 0.98
1871 5490 8.737168 ATGTGACAGTAAATGTGCAGTAATAT 57.263 30.769 0.00 0.00 44.17 1.28
1872 5491 8.560355 TGTGACAGTAAATGTGCAGTAATATT 57.440 30.769 0.00 0.00 44.17 1.28
1873 5492 9.008965 TGTGACAGTAAATGTGCAGTAATATTT 57.991 29.630 0.00 0.00 44.17 1.40
1874 5493 9.840427 GTGACAGTAAATGTGCAGTAATATTTT 57.160 29.630 0.00 0.00 44.17 1.82
1875 5494 9.838975 TGACAGTAAATGTGCAGTAATATTTTG 57.161 29.630 0.00 0.00 44.17 2.44
1876 5495 9.289303 GACAGTAAATGTGCAGTAATATTTTGG 57.711 33.333 0.00 0.00 44.17 3.28
1877 5496 9.019656 ACAGTAAATGTGCAGTAATATTTTGGA 57.980 29.630 0.00 0.00 41.91 3.53
1880 5499 9.801873 GTAAATGTGCAGTAATATTTTGGATGT 57.198 29.630 0.00 0.00 0.00 3.06
1881 5500 8.931385 AAATGTGCAGTAATATTTTGGATGTC 57.069 30.769 0.00 0.00 0.00 3.06
1882 5501 7.886629 ATGTGCAGTAATATTTTGGATGTCT 57.113 32.000 0.00 0.00 0.00 3.41
1883 5502 7.087409 TGTGCAGTAATATTTTGGATGTCTG 57.913 36.000 0.00 0.00 0.00 3.51
1884 5503 5.973565 GTGCAGTAATATTTTGGATGTCTGC 59.026 40.000 0.00 0.00 43.68 4.26
1885 5504 5.887598 TGCAGTAATATTTTGGATGTCTGCT 59.112 36.000 13.03 0.00 43.73 4.24
1886 5505 6.377996 TGCAGTAATATTTTGGATGTCTGCTT 59.622 34.615 13.03 0.00 43.73 3.91
1887 5506 6.914757 GCAGTAATATTTTGGATGTCTGCTTC 59.085 38.462 0.00 0.00 41.31 3.86
1888 5507 7.415541 GCAGTAATATTTTGGATGTCTGCTTCA 60.416 37.037 0.00 0.00 41.31 3.02
1889 5508 8.461222 CAGTAATATTTTGGATGTCTGCTTCAA 58.539 33.333 0.00 0.00 0.00 2.69
1890 5509 8.680903 AGTAATATTTTGGATGTCTGCTTCAAG 58.319 33.333 0.00 0.00 0.00 3.02
1891 5510 7.472334 AATATTTTGGATGTCTGCTTCAAGT 57.528 32.000 0.00 0.00 0.00 3.16
1892 5511 5.796424 ATTTTGGATGTCTGCTTCAAGTT 57.204 34.783 0.00 0.00 0.00 2.66
1893 5512 4.836125 TTTGGATGTCTGCTTCAAGTTC 57.164 40.909 0.00 0.00 0.00 3.01
1894 5513 3.490439 TGGATGTCTGCTTCAAGTTCA 57.510 42.857 0.00 0.00 0.00 3.18
1895 5514 3.819368 TGGATGTCTGCTTCAAGTTCAA 58.181 40.909 0.00 0.00 0.00 2.69
1896 5515 4.206375 TGGATGTCTGCTTCAAGTTCAAA 58.794 39.130 0.00 0.00 0.00 2.69
1897 5516 4.828939 TGGATGTCTGCTTCAAGTTCAAAT 59.171 37.500 0.00 0.00 0.00 2.32
1898 5517 5.159209 GGATGTCTGCTTCAAGTTCAAATG 58.841 41.667 0.00 0.00 0.00 2.32
1899 5518 5.278660 GGATGTCTGCTTCAAGTTCAAATGT 60.279 40.000 0.00 0.00 0.00 2.71
1900 5519 4.923893 TGTCTGCTTCAAGTTCAAATGTG 58.076 39.130 0.00 0.00 0.00 3.21
1901 5520 4.639755 TGTCTGCTTCAAGTTCAAATGTGA 59.360 37.500 0.00 0.00 0.00 3.58
1902 5521 4.972440 GTCTGCTTCAAGTTCAAATGTGAC 59.028 41.667 0.00 0.00 31.90 3.67
1903 5522 4.639755 TCTGCTTCAAGTTCAAATGTGACA 59.360 37.500 0.00 0.00 31.90 3.58
1904 5523 4.923893 TGCTTCAAGTTCAAATGTGACAG 58.076 39.130 0.00 0.00 31.90 3.51
1905 5524 4.398988 TGCTTCAAGTTCAAATGTGACAGT 59.601 37.500 0.00 0.00 31.90 3.55
1906 5525 5.588246 TGCTTCAAGTTCAAATGTGACAGTA 59.412 36.000 0.00 0.00 31.90 2.74
1907 5526 6.094742 TGCTTCAAGTTCAAATGTGACAGTAA 59.905 34.615 0.00 0.00 31.90 2.24
1908 5527 6.972328 GCTTCAAGTTCAAATGTGACAGTAAA 59.028 34.615 0.00 0.00 31.90 2.01
1909 5528 7.649306 GCTTCAAGTTCAAATGTGACAGTAAAT 59.351 33.333 0.00 0.00 31.90 1.40
1910 5529 8.854979 TTCAAGTTCAAATGTGACAGTAAATG 57.145 30.769 0.00 0.00 31.90 2.32
1912 5531 7.914871 TCAAGTTCAAATGTGACAGTAAATGTG 59.085 33.333 0.00 0.00 44.17 3.21
1913 5532 6.208644 AGTTCAAATGTGACAGTAAATGTGC 58.791 36.000 0.00 0.00 44.17 4.57
1914 5533 5.764487 TCAAATGTGACAGTAAATGTGCA 57.236 34.783 0.00 0.00 44.17 4.57
1915 5534 5.761003 TCAAATGTGACAGTAAATGTGCAG 58.239 37.500 0.00 0.00 44.17 4.41
1933 5552 5.576774 TGTGCAGTCTAGTTGATCATTTACG 59.423 40.000 0.00 0.00 0.00 3.18
2306 9279 8.429237 AATCCCATTCAGTTTGTAAAATGGTA 57.571 30.769 10.98 0.00 44.32 3.25
2314 9287 8.472007 TCAGTTTGTAAAATGGTATGGAACTT 57.528 30.769 5.15 0.00 34.95 2.66
2396 9369 2.676076 CTCCGAGCAAACCCAATTTTG 58.324 47.619 0.00 0.00 39.15 2.44
2463 9436 5.009210 CCAGGTGGACGATTTTAGTCAAAAA 59.991 40.000 0.00 0.00 40.20 1.94
2522 9495 1.479730 AGGGACGAAAAGTATCCGGTC 59.520 52.381 0.00 0.00 32.90 4.79
2648 9624 9.979578 TCAATTATACAAACTTTGTTCAGCATT 57.020 25.926 12.35 2.98 42.22 3.56
2656 9632 6.774354 AACTTTGTTCAGCATTGCTAAATG 57.226 33.333 11.55 8.39 45.13 2.32
2808 9784 6.375455 GGATTAAAATTCTTGAGCTCCTGTCA 59.625 38.462 12.15 0.00 0.00 3.58
2999 10050 5.922053 TCTTATGACATCATACTGCAGCTT 58.078 37.500 15.27 0.00 38.44 3.74
3027 10080 8.764287 CAACACACATTATATAAATCTCTCGCA 58.236 33.333 0.00 0.00 0.00 5.10
3107 10168 5.973899 TGTGCAGCCATTTTACATAGAAA 57.026 34.783 0.00 0.00 0.00 2.52
3279 10341 1.533625 TGCACTTAACACATGGCCTC 58.466 50.000 3.32 0.00 0.00 4.70
3293 10355 5.587043 CACATGGCCTCATTTGCAAATAAAT 59.413 36.000 23.69 8.92 0.00 1.40
3323 10385 4.564041 AGCGCACATTCTATTCTGGATAG 58.436 43.478 11.47 0.00 39.31 2.08
3360 10612 5.998363 AGTCTAACTGAAACATTTCCTGGAC 59.002 40.000 0.00 4.82 36.36 4.02
3376 10628 1.327690 GGACGACCACAGGCCATCTA 61.328 60.000 5.01 0.00 35.97 1.98
3432 10684 1.067295 TTCCAGGAAGCTGACCACAT 58.933 50.000 11.89 0.00 0.00 3.21
3434 10686 2.481441 TCCAGGAAGCTGACCACATAT 58.519 47.619 11.89 0.00 0.00 1.78
3599 10943 4.164796 TCTGGTAGGTGATCTGCATTTGAT 59.835 41.667 0.00 0.00 0.00 2.57
3609 10953 6.261603 GTGATCTGCATTTGATAACATCTCCA 59.738 38.462 0.00 0.00 0.00 3.86
3615 10959 8.014070 TGCATTTGATAACATCTCCATTGATT 57.986 30.769 0.00 0.00 0.00 2.57
3642 10986 7.424803 CAAATTAGTTGTTTGTGACATCTGGA 58.575 34.615 0.00 0.00 38.45 3.86
3725 11665 3.149196 CAGTTGCCCTGTACTCAATTGT 58.851 45.455 5.13 0.00 36.37 2.71
3726 11666 3.189287 CAGTTGCCCTGTACTCAATTGTC 59.811 47.826 5.13 0.00 36.37 3.18
3728 11668 3.719268 TGCCCTGTACTCAATTGTCAT 57.281 42.857 5.13 0.00 0.00 3.06
3729 11669 3.346315 TGCCCTGTACTCAATTGTCATG 58.654 45.455 5.13 0.00 0.00 3.07
3730 11670 3.008923 TGCCCTGTACTCAATTGTCATGA 59.991 43.478 5.13 0.00 0.00 3.07
3733 11673 5.188434 CCCTGTACTCAATTGTCATGATGT 58.812 41.667 5.13 0.00 0.00 3.06
3734 11674 5.295292 CCCTGTACTCAATTGTCATGATGTC 59.705 44.000 5.13 0.00 0.00 3.06
3735 11675 5.876460 CCTGTACTCAATTGTCATGATGTCA 59.124 40.000 5.13 0.00 0.00 3.58
3747 11687 4.893424 CATGATGTCATGCTGAATGTCA 57.107 40.909 9.81 0.00 45.92 3.58
3748 11688 4.848757 CATGATGTCATGCTGAATGTCAG 58.151 43.478 9.81 0.72 45.92 3.51
3749 11689 4.574828 CATGATGTCATGCTGAATGTCAGA 59.425 41.667 9.81 0.00 44.26 3.27
3750 11690 4.575236 ATGATGTCATGCTGAATGTCAGAC 59.425 41.667 9.43 0.00 45.88 3.51
3751 11691 5.629366 ATGATGTCATGCTGAATGTCAGACT 60.629 40.000 9.43 0.00 45.88 3.24
3826 12621 9.595823 CCTGGTAGGTTTGGTATAATATTATCG 57.404 37.037 11.28 0.00 0.00 2.92
3995 12794 1.003118 TGTTTAGCGCAATCTGACCCT 59.997 47.619 11.47 0.00 0.00 4.34
4174 12976 7.520451 AAGGACCTGGTAGTAAAATTGAAAC 57.480 36.000 0.00 0.00 0.00 2.78
4324 13168 6.538742 ACAATCATTTGTAGAATCTGGGTACG 59.461 38.462 0.00 0.00 44.22 3.67
4419 13268 7.392494 TCATTCTAAGTACTCCAGTGTAGTG 57.608 40.000 0.00 0.00 0.00 2.74
4496 13580 7.968014 ATTCTGCTTATTTCCCTTCTTCAAT 57.032 32.000 0.00 0.00 0.00 2.57
4677 13765 0.465097 GGCACCAGGACTCATGGATG 60.465 60.000 16.68 11.28 40.51 3.51
4815 13904 8.364142 ACTTAACTATGTTGCAAAATTTAGGCA 58.636 29.630 7.58 12.04 35.41 4.75
4880 13969 3.068590 CAGTTTGGCAGAATGGTGAGTTT 59.931 43.478 0.00 0.00 35.86 2.66
5072 14163 8.752766 AAGAAATGTTGCTTCAAATATGTCTG 57.247 30.769 0.00 0.00 0.00 3.51
5276 14390 6.679327 AGTTTGGTTAGAACTTCTGACAAC 57.321 37.500 13.97 10.72 35.00 3.32
5282 14396 6.540914 TGGTTAGAACTTCTGACAACGAAAAT 59.459 34.615 13.97 0.00 35.00 1.82
5501 14615 5.736951 AGAATTTCTGCTGTACTCAGACT 57.263 39.130 14.94 8.47 43.76 3.24
5510 14624 3.499918 GCTGTACTCAGACTGCACAAATT 59.500 43.478 0.00 0.00 43.76 1.82
5611 14725 2.674852 CAAGTGGGATCGTGATTGACAG 59.325 50.000 0.00 0.00 0.00 3.51
5684 14814 2.869801 CAAGGTACGCTGTGTCTTTTCA 59.130 45.455 0.00 0.00 0.00 2.69
5759 14912 7.886405 ACTGTCTTTTCCTATTCGTTACTTC 57.114 36.000 0.00 0.00 0.00 3.01
5953 15114 4.314961 TGTACAGTATGCAGGTGTCTTTG 58.685 43.478 1.89 0.00 42.53 2.77
5954 15115 2.154462 ACAGTATGCAGGTGTCTTTGC 58.846 47.619 0.00 0.00 42.53 3.68
5955 15116 1.129251 CAGTATGCAGGTGTCTTTGCG 59.871 52.381 0.00 0.00 43.13 4.85
5956 15117 0.179189 GTATGCAGGTGTCTTTGCGC 60.179 55.000 0.00 0.00 43.13 6.09
5994 15158 6.628644 ATCTTGAGGAAGTTTAGTAGCCTT 57.371 37.500 0.00 0.00 0.00 4.35
6001 15165 6.203072 AGGAAGTTTAGTAGCCTTGATAGGA 58.797 40.000 0.00 0.00 45.05 2.94
6002 15166 6.098552 AGGAAGTTTAGTAGCCTTGATAGGAC 59.901 42.308 0.00 0.00 45.05 3.85
6026 15190 9.260002 GACACATTTGTTACCATTTTGATCTTT 57.740 29.630 0.00 0.00 35.47 2.52
6082 15894 9.730705 AATATAATAGAACTGCTGTGCATATGT 57.269 29.630 4.32 0.00 38.13 2.29
6117 15929 4.201980 CGACAGTGGTATGATAAAGACCGA 60.202 45.833 0.00 0.00 43.66 4.69
6199 16012 6.879993 AGGAAGTATCGTATCGTATGTCTCAT 59.120 38.462 0.00 0.00 0.00 2.90
6200 16013 8.039538 AGGAAGTATCGTATCGTATGTCTCATA 58.960 37.037 0.00 0.00 0.00 2.15
6201 16014 8.115520 GGAAGTATCGTATCGTATGTCTCATAC 58.884 40.741 9.13 9.13 0.00 2.39
6202 16015 8.774890 AAGTATCGTATCGTATGTCTCATACT 57.225 34.615 14.95 3.67 0.00 2.12
6203 16016 8.410030 AGTATCGTATCGTATGTCTCATACTC 57.590 38.462 14.95 5.41 0.00 2.59
6204 16017 8.252417 AGTATCGTATCGTATGTCTCATACTCT 58.748 37.037 14.95 7.09 0.00 3.24
6205 16018 6.947903 TCGTATCGTATGTCTCATACTCTC 57.052 41.667 14.95 5.41 0.00 3.20
6206 16019 6.453092 TCGTATCGTATGTCTCATACTCTCA 58.547 40.000 14.95 1.41 0.00 3.27
6221 16034 4.669206 ACTCTCATGGCATCACTCTAAG 57.331 45.455 0.00 0.00 0.00 2.18
6341 16156 0.109781 CGGTTGAACCATTTCGCCTG 60.110 55.000 15.58 0.00 38.47 4.85
6364 16179 8.607459 CCTGTTATTGTTCAGACATATGAAGTC 58.393 37.037 10.38 0.00 39.78 3.01
6397 16213 1.740585 TGTGTGGTTTTGGTCTTGTCG 59.259 47.619 0.00 0.00 0.00 4.35
6423 16262 2.222863 ACGCGTGTGTTTGTTCTTGTAC 60.223 45.455 12.93 0.00 0.00 2.90
6424 16263 2.222841 CGCGTGTGTTTGTTCTTGTACA 60.223 45.455 0.00 0.00 0.00 2.90
6433 16272 9.347934 TGTGTTTGTTCTTGTACATTAAAACTG 57.652 29.630 0.00 0.00 0.00 3.16
6826 16687 5.259832 ACCCTGAAATACTAGCTTACGAC 57.740 43.478 0.00 0.00 0.00 4.34
6854 16715 2.477825 CGCTTGATGTGATGGACCTAG 58.522 52.381 0.00 0.00 0.00 3.02
6858 16719 3.758755 TGATGTGATGGACCTAGATGC 57.241 47.619 0.00 0.00 0.00 3.91
6859 16720 2.369860 TGATGTGATGGACCTAGATGCC 59.630 50.000 0.00 0.00 0.00 4.40
6861 16722 2.481441 TGTGATGGACCTAGATGCCTT 58.519 47.619 0.00 0.00 0.00 4.35
6862 16723 2.846206 TGTGATGGACCTAGATGCCTTT 59.154 45.455 0.00 0.00 0.00 3.11
6866 16727 1.209504 TGGACCTAGATGCCTTTTCCG 59.790 52.381 0.00 0.00 0.00 4.30
6868 16729 1.209747 GACCTAGATGCCTTTTCCGGT 59.790 52.381 0.00 0.00 0.00 5.28
6870 16731 2.841881 ACCTAGATGCCTTTTCCGGTAA 59.158 45.455 0.00 0.00 0.00 2.85
6871 16732 3.264964 ACCTAGATGCCTTTTCCGGTAAA 59.735 43.478 6.07 6.07 0.00 2.01
6872 16733 4.263594 ACCTAGATGCCTTTTCCGGTAAAA 60.264 41.667 7.70 9.14 35.74 1.52
6891 16752 2.880822 AAAAGTGATCGATGCACGTG 57.119 45.000 12.28 12.28 41.04 4.49
6893 16754 2.647529 AAGTGATCGATGCACGTGTA 57.352 45.000 18.38 14.09 41.04 2.90
6894 16755 1.909376 AGTGATCGATGCACGTGTAC 58.091 50.000 18.38 7.95 41.04 2.90
6896 16757 2.681344 AGTGATCGATGCACGTGTACTA 59.319 45.455 18.38 2.02 41.04 1.82
6908 16769 2.094545 ACGTGTACTAAGGCCGTTAAGG 60.095 50.000 0.00 0.00 44.97 2.69
6929 16790 2.932234 CGCGTTGGGGAGACTGTCT 61.932 63.158 10.66 10.66 0.00 3.41
7001 16862 2.348872 GCACAGTGATGAACAGTTGTCG 60.349 50.000 4.15 0.00 0.00 4.35
7021 16882 4.221738 CGTAAGAAACATCGGTACAACG 57.778 45.455 0.00 0.00 43.02 4.10
7024 16885 5.219841 CGTAAGAAACATCGGTACAACGTAC 60.220 44.000 0.00 0.00 43.02 3.67
7032 16893 2.877786 TCGGTACAACGTACAAGTCTGA 59.122 45.455 6.62 0.00 34.94 3.27
7082 16943 6.627508 GCATCTCTTGGCAATCAGATTCTTTT 60.628 38.462 15.66 0.00 0.00 2.27
7089 16950 3.429960 GCAATCAGATTCTTTTGAGGGCC 60.430 47.826 0.00 0.00 0.00 5.80
7146 17007 1.270550 GTGCTCAACATGGGTCCAAAG 59.729 52.381 0.00 0.00 0.00 2.77
7164 17025 1.661341 AGAGGTTTCATCAGCATCGC 58.339 50.000 0.00 0.00 0.00 4.58
7296 17157 0.468226 TATTCGTGGAGGTCATGGCC 59.532 55.000 8.79 8.79 33.31 5.36
7297 17158 2.270874 ATTCGTGGAGGTCATGGCCC 62.271 60.000 14.18 4.32 33.31 5.80
7301 17162 0.541764 GTGGAGGTCATGGCCCAAAA 60.542 55.000 14.18 0.00 0.00 2.44
7303 17164 0.897621 GGAGGTCATGGCCCAAAAAG 59.102 55.000 14.18 0.00 0.00 2.27
7323 17184 4.226427 AGAAAGCAATATCAGCACTCCA 57.774 40.909 3.33 0.00 0.00 3.86
7361 17222 9.492973 AAAATAGCATTTTTGTAGCATTGAGTT 57.507 25.926 0.00 0.00 0.00 3.01
7362 17223 9.492973 AAATAGCATTTTTGTAGCATTGAGTTT 57.507 25.926 0.00 0.00 0.00 2.66
7449 17344 4.212636 GCACAAAGCATTGCAGATTTTTCT 59.787 37.500 11.91 0.00 44.79 2.52
7450 17345 5.277634 GCACAAAGCATTGCAGATTTTTCTT 60.278 36.000 11.91 0.00 44.79 2.52
7451 17346 6.073657 GCACAAAGCATTGCAGATTTTTCTTA 60.074 34.615 11.91 0.00 44.79 2.10
7453 17348 7.170320 CACAAAGCATTGCAGATTTTTCTTAGT 59.830 33.333 11.91 0.00 40.34 2.24
7454 17349 7.712205 ACAAAGCATTGCAGATTTTTCTTAGTT 59.288 29.630 11.91 0.00 40.34 2.24
7455 17350 8.553696 CAAAGCATTGCAGATTTTTCTTAGTTT 58.446 29.630 11.91 0.00 0.00 2.66
7457 17352 8.667076 AGCATTGCAGATTTTTCTTAGTTTTT 57.333 26.923 11.91 0.00 0.00 1.94
7458 17353 8.768019 AGCATTGCAGATTTTTCTTAGTTTTTC 58.232 29.630 11.91 0.00 0.00 2.29
7459 17354 8.768019 GCATTGCAGATTTTTCTTAGTTTTTCT 58.232 29.630 3.15 0.00 0.00 2.52
7500 17395 4.828939 TGTTCATCAAGAGCCATTGAGTTT 59.171 37.500 7.22 0.00 42.20 2.66
7509 17404 1.938016 GCCATTGAGTTTGCCAAGCAG 60.938 52.381 0.00 0.00 40.61 4.24
7573 17468 2.432146 TGAAGATCCACCGATCAGAAGG 59.568 50.000 3.15 0.00 46.42 3.46
7580 17475 1.110442 ACCGATCAGAAGGAGAGCTG 58.890 55.000 0.00 0.00 0.00 4.24
7583 17478 1.134877 CGATCAGAAGGAGAGCTGCAA 60.135 52.381 1.02 0.00 32.27 4.08
7619 17514 0.675083 TCCTTTGTGTTGCATGCAGG 59.325 50.000 21.50 16.42 0.00 4.85
7661 17563 2.031437 CGCCTTAAGCTGCTGATTCTTC 59.969 50.000 1.35 0.00 40.39 2.87
7670 17572 3.305199 GCTGCTGATTCTTCTTGTTGCTT 60.305 43.478 0.00 0.00 0.00 3.91
7672 17574 3.254166 TGCTGATTCTTCTTGTTGCTTCC 59.746 43.478 0.00 0.00 0.00 3.46
7676 17578 1.497991 TCTTCTTGTTGCTTCCGTCG 58.502 50.000 0.00 0.00 0.00 5.12
7679 17581 0.599204 TCTTGTTGCTTCCGTCGACC 60.599 55.000 10.58 0.00 0.00 4.79
7680 17582 0.878523 CTTGTTGCTTCCGTCGACCA 60.879 55.000 10.58 0.00 0.00 4.02
7681 17583 0.462225 TTGTTGCTTCCGTCGACCAA 60.462 50.000 10.58 5.00 0.00 3.67
7682 17584 0.878523 TGTTGCTTCCGTCGACCAAG 60.879 55.000 10.58 13.16 0.00 3.61
7683 17585 1.301401 TTGCTTCCGTCGACCAAGG 60.301 57.895 18.79 11.65 0.00 3.61
7684 17586 2.434359 GCTTCCGTCGACCAAGGG 60.434 66.667 18.79 11.34 0.00 3.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 1.251527 TGGAGACAGCTCGGAGAACC 61.252 60.000 9.69 2.91 42.25 3.62
5 6 2.268022 TGGAGACAGCTCGGAGAAC 58.732 57.895 9.69 0.00 42.25 3.01
22 23 4.514577 AGAACTCGCGGCCGGATG 62.515 66.667 29.38 16.78 34.56 3.51
23 24 4.514577 CAGAACTCGCGGCCGGAT 62.515 66.667 29.38 8.36 34.56 4.18
29 30 2.436646 AATGCCCAGAACTCGCGG 60.437 61.111 6.13 0.00 0.00 6.46
30 31 2.753966 CCAATGCCCAGAACTCGCG 61.754 63.158 0.00 0.00 0.00 5.87
31 32 0.749454 ATCCAATGCCCAGAACTCGC 60.749 55.000 0.00 0.00 0.00 5.03
32 33 1.755179 AATCCAATGCCCAGAACTCG 58.245 50.000 0.00 0.00 0.00 4.18
34 35 2.027837 GCAAAATCCAATGCCCAGAACT 60.028 45.455 0.00 0.00 36.56 3.01
36 37 1.067000 CGCAAAATCCAATGCCCAGAA 60.067 47.619 0.00 0.00 39.39 3.02
38 39 0.460635 CCGCAAAATCCAATGCCCAG 60.461 55.000 0.00 0.00 39.39 4.45
41 42 2.100584 TCATACCGCAAAATCCAATGCC 59.899 45.455 0.00 0.00 39.39 4.40
42 43 3.374745 CTCATACCGCAAAATCCAATGC 58.625 45.455 0.00 0.00 39.17 3.56
44 45 3.290710 AGCTCATACCGCAAAATCCAAT 58.709 40.909 0.00 0.00 0.00 3.16
45 46 2.722094 AGCTCATACCGCAAAATCCAA 58.278 42.857 0.00 0.00 0.00 3.53
46 47 2.418368 AGCTCATACCGCAAAATCCA 57.582 45.000 0.00 0.00 0.00 3.41
47 48 2.945668 AGAAGCTCATACCGCAAAATCC 59.054 45.455 0.00 0.00 0.00 3.01
48 49 4.622701 AAGAAGCTCATACCGCAAAATC 57.377 40.909 0.00 0.00 0.00 2.17
49 50 5.391312 AAAAGAAGCTCATACCGCAAAAT 57.609 34.783 0.00 0.00 0.00 1.82
50 51 4.846779 AAAAGAAGCTCATACCGCAAAA 57.153 36.364 0.00 0.00 0.00 2.44
51 52 5.065988 GGATAAAAGAAGCTCATACCGCAAA 59.934 40.000 0.00 0.00 0.00 3.68
52 53 4.574828 GGATAAAAGAAGCTCATACCGCAA 59.425 41.667 0.00 0.00 0.00 4.85
53 54 4.127171 GGATAAAAGAAGCTCATACCGCA 58.873 43.478 0.00 0.00 0.00 5.69
54 55 4.127171 TGGATAAAAGAAGCTCATACCGC 58.873 43.478 0.00 0.00 0.00 5.68
56 57 7.807977 TCATTGGATAAAAGAAGCTCATACC 57.192 36.000 0.00 0.00 0.00 2.73
59 60 8.574737 GCTAATCATTGGATAAAAGAAGCTCAT 58.425 33.333 0.00 0.00 32.09 2.90
60 61 7.776969 AGCTAATCATTGGATAAAAGAAGCTCA 59.223 33.333 0.00 0.00 32.09 4.26
61 62 8.074972 CAGCTAATCATTGGATAAAAGAAGCTC 58.925 37.037 0.00 0.00 32.09 4.09
63 64 7.934457 TCAGCTAATCATTGGATAAAAGAAGC 58.066 34.615 0.00 0.00 32.09 3.86
64 65 9.727627 GTTCAGCTAATCATTGGATAAAAGAAG 57.272 33.333 0.00 0.00 32.09 2.85
65 66 8.686334 GGTTCAGCTAATCATTGGATAAAAGAA 58.314 33.333 0.00 0.00 32.09 2.52
66 67 7.285401 GGGTTCAGCTAATCATTGGATAAAAGA 59.715 37.037 0.00 0.00 32.09 2.52
67 68 7.428826 GGGTTCAGCTAATCATTGGATAAAAG 58.571 38.462 0.00 0.00 32.09 2.27
68 69 6.323739 GGGGTTCAGCTAATCATTGGATAAAA 59.676 38.462 0.00 0.00 32.09 1.52
69 70 5.833131 GGGGTTCAGCTAATCATTGGATAAA 59.167 40.000 0.00 0.00 32.09 1.40
72 73 3.437052 GGGGGTTCAGCTAATCATTGGAT 60.437 47.826 0.00 0.00 34.43 3.41
73 74 2.091885 GGGGGTTCAGCTAATCATTGGA 60.092 50.000 0.00 0.00 0.00 3.53
74 75 2.091665 AGGGGGTTCAGCTAATCATTGG 60.092 50.000 0.00 0.00 0.00 3.16
75 76 3.217626 GAGGGGGTTCAGCTAATCATTG 58.782 50.000 0.00 0.00 0.00 2.82
76 77 2.175715 GGAGGGGGTTCAGCTAATCATT 59.824 50.000 0.00 0.00 0.00 2.57
78 79 1.213296 GGAGGGGGTTCAGCTAATCA 58.787 55.000 0.00 0.00 0.00 2.57
79 80 0.474614 GGGAGGGGGTTCAGCTAATC 59.525 60.000 0.00 0.00 0.00 1.75
80 81 0.994050 GGGGAGGGGGTTCAGCTAAT 60.994 60.000 0.00 0.00 0.00 1.73
82 83 2.042261 GGGGAGGGGGTTCAGCTA 59.958 66.667 0.00 0.00 0.00 3.32
83 84 3.952799 GAGGGGAGGGGGTTCAGCT 62.953 68.421 0.00 0.00 0.00 4.24
84 85 3.412408 GAGGGGAGGGGGTTCAGC 61.412 72.222 0.00 0.00 0.00 4.26
85 86 0.846870 AAAGAGGGGAGGGGGTTCAG 60.847 60.000 0.00 0.00 0.00 3.02
86 87 0.404346 AAAAGAGGGGAGGGGGTTCA 60.404 55.000 0.00 0.00 0.00 3.18
88 89 2.991336 AAAAAGAGGGGAGGGGGTT 58.009 52.632 0.00 0.00 0.00 4.11
89 90 4.816765 AAAAAGAGGGGAGGGGGT 57.183 55.556 0.00 0.00 0.00 4.95
106 107 8.686334 GCAAGGAAATCAATTGATCCTAAGTAA 58.314 33.333 24.48 0.00 31.01 2.24
107 108 7.012327 CGCAAGGAAATCAATTGATCCTAAGTA 59.988 37.037 24.48 0.00 31.01 2.24
108 109 6.183360 CGCAAGGAAATCAATTGATCCTAAGT 60.183 38.462 24.48 11.42 31.01 2.24
109 110 6.204359 CGCAAGGAAATCAATTGATCCTAAG 58.796 40.000 24.48 20.77 31.01 2.18
110 111 6.135290 CGCAAGGAAATCAATTGATCCTAA 57.865 37.500 24.48 0.00 31.01 2.69
111 112 5.756195 CGCAAGGAAATCAATTGATCCTA 57.244 39.130 24.48 0.00 31.01 2.94
112 113 4.644103 CGCAAGGAAATCAATTGATCCT 57.356 40.909 20.45 20.45 32.11 3.24
128 129 4.484236 TCAACAAATCATTTAGCCGCAAG 58.516 39.130 0.00 0.00 0.00 4.01
129 130 4.511617 TCAACAAATCATTTAGCCGCAA 57.488 36.364 0.00 0.00 0.00 4.85
130 131 4.439974 GGATCAACAAATCATTTAGCCGCA 60.440 41.667 0.00 0.00 0.00 5.69
132 133 5.036737 GTGGATCAACAAATCATTTAGCCG 58.963 41.667 0.00 0.00 0.00 5.52
133 134 5.036737 CGTGGATCAACAAATCATTTAGCC 58.963 41.667 0.13 0.00 0.00 3.93
134 135 5.640732 ACGTGGATCAACAAATCATTTAGC 58.359 37.500 0.13 0.00 0.00 3.09
136 137 6.310960 CGAACGTGGATCAACAAATCATTTA 58.689 36.000 0.13 0.00 0.00 1.40
139 140 3.426159 GCGAACGTGGATCAACAAATCAT 60.426 43.478 0.13 0.00 0.00 2.45
140 141 2.095969 GCGAACGTGGATCAACAAATCA 60.096 45.455 0.13 0.00 0.00 2.57
141 142 2.159627 AGCGAACGTGGATCAACAAATC 59.840 45.455 0.13 0.00 0.00 2.17
143 144 1.588674 AGCGAACGTGGATCAACAAA 58.411 45.000 0.13 0.00 0.00 2.83
146 147 2.186076 CTCTAGCGAACGTGGATCAAC 58.814 52.381 0.00 0.00 0.00 3.18
147 148 1.469251 GCTCTAGCGAACGTGGATCAA 60.469 52.381 0.00 0.00 0.00 2.57
148 149 0.100682 GCTCTAGCGAACGTGGATCA 59.899 55.000 0.00 0.00 0.00 2.92
149 150 0.595310 GGCTCTAGCGAACGTGGATC 60.595 60.000 0.00 0.00 43.26 3.36
150 151 1.320344 TGGCTCTAGCGAACGTGGAT 61.320 55.000 0.00 0.00 43.26 3.41
151 152 1.529152 TTGGCTCTAGCGAACGTGGA 61.529 55.000 0.00 0.00 43.26 4.02
152 153 1.080093 TTGGCTCTAGCGAACGTGG 60.080 57.895 0.00 0.00 43.26 4.94
153 154 2.070861 GTTGGCTCTAGCGAACGTG 58.929 57.895 12.99 0.00 46.51 4.49
154 155 4.573162 GTTGGCTCTAGCGAACGT 57.427 55.556 12.99 0.00 46.51 3.99
157 158 3.887621 AATACTGTTGGCTCTAGCGAA 57.112 42.857 0.00 0.00 43.26 4.70
158 159 3.447586 AGAAATACTGTTGGCTCTAGCGA 59.552 43.478 0.00 0.00 43.26 4.93
159 160 3.786635 AGAAATACTGTTGGCTCTAGCG 58.213 45.455 0.00 0.00 43.26 4.26
160 161 4.759782 TGAGAAATACTGTTGGCTCTAGC 58.240 43.478 0.00 0.00 41.14 3.42
161 162 7.856145 AATTGAGAAATACTGTTGGCTCTAG 57.144 36.000 0.00 0.00 0.00 2.43
162 163 9.905713 ATAAATTGAGAAATACTGTTGGCTCTA 57.094 29.630 0.00 0.00 0.00 2.43
163 164 8.814038 ATAAATTGAGAAATACTGTTGGCTCT 57.186 30.769 0.00 0.00 0.00 4.09
164 165 9.860898 AAATAAATTGAGAAATACTGTTGGCTC 57.139 29.630 0.00 0.00 0.00 4.70
165 166 9.860898 GAAATAAATTGAGAAATACTGTTGGCT 57.139 29.630 0.00 0.00 0.00 4.75
166 167 9.087424 GGAAATAAATTGAGAAATACTGTTGGC 57.913 33.333 0.00 0.00 0.00 4.52
188 189 9.753674 ATCATCCAACAGAGTAAATAAAGGAAA 57.246 29.630 0.00 0.00 0.00 3.13
189 190 9.753674 AATCATCCAACAGAGTAAATAAAGGAA 57.246 29.630 0.00 0.00 0.00 3.36
191 192 8.960591 ACAATCATCCAACAGAGTAAATAAAGG 58.039 33.333 0.00 0.00 0.00 3.11
195 196 9.391006 GGTTACAATCATCCAACAGAGTAAATA 57.609 33.333 0.00 0.00 0.00 1.40
197 198 7.227873 TGGTTACAATCATCCAACAGAGTAAA 58.772 34.615 0.00 0.00 0.00 2.01
198 199 6.774673 TGGTTACAATCATCCAACAGAGTAA 58.225 36.000 0.00 0.00 0.00 2.24
199 200 6.367374 TGGTTACAATCATCCAACAGAGTA 57.633 37.500 0.00 0.00 0.00 2.59
200 201 5.241403 TGGTTACAATCATCCAACAGAGT 57.759 39.130 0.00 0.00 0.00 3.24
201 202 6.573664 TTTGGTTACAATCATCCAACAGAG 57.426 37.500 0.00 0.00 39.26 3.35
203 204 6.748132 AGTTTTGGTTACAATCATCCAACAG 58.252 36.000 0.00 0.00 39.26 3.16
236 2921 7.977853 GGATCAATGCAGAGTTTTGATTACAAT 59.022 33.333 12.47 0.00 39.52 2.71
238 2923 6.660521 AGGATCAATGCAGAGTTTTGATTACA 59.339 34.615 12.47 0.00 39.52 2.41
239 2924 7.093322 AGGATCAATGCAGAGTTTTGATTAC 57.907 36.000 12.47 9.50 39.52 1.89
240 2925 8.806429 TTAGGATCAATGCAGAGTTTTGATTA 57.194 30.769 12.47 1.94 39.52 1.75
242 2927 7.707624 TTTAGGATCAATGCAGAGTTTTGAT 57.292 32.000 11.34 11.34 41.50 2.57
243 2928 7.523293 TTTTAGGATCAATGCAGAGTTTTGA 57.477 32.000 2.36 2.36 34.18 2.69
273 2966 7.760340 CGGAAAGAACTAAATAAGACAGCTAGT 59.240 37.037 0.00 0.00 0.00 2.57
274 2967 7.254151 GCGGAAAGAACTAAATAAGACAGCTAG 60.254 40.741 0.00 0.00 0.00 3.42
275 2968 6.534079 GCGGAAAGAACTAAATAAGACAGCTA 59.466 38.462 0.00 0.00 0.00 3.32
280 2976 5.873164 TGGAGCGGAAAGAACTAAATAAGAC 59.127 40.000 0.00 0.00 0.00 3.01
286 3771 2.874457 GCCTGGAGCGGAAAGAACTAAA 60.874 50.000 0.00 0.00 0.00 1.85
289 3774 1.003233 GCCTGGAGCGGAAAGAACT 60.003 57.895 0.00 0.00 0.00 3.01
329 3814 0.884704 TCTGGCTTCTCGTGCAAACC 60.885 55.000 0.00 0.00 0.00 3.27
393 3878 3.629398 AGCAAGACTGAAAACCAGACAAG 59.371 43.478 0.00 0.00 45.78 3.16
449 3948 6.973229 TCATGTTCATGTCATACAACAGAG 57.027 37.500 11.73 9.16 31.50 3.35
451 3950 7.311364 TCATCATGTTCATGTCATACAACAG 57.689 36.000 11.73 7.34 31.50 3.16
462 3961 3.889538 AGGGAAGCATCATCATGTTCATG 59.110 43.478 6.46 6.46 31.86 3.07
540 4039 2.341257 CAGACACCTTGACCAGAATCG 58.659 52.381 0.00 0.00 0.00 3.34
929 4443 7.320443 TGGTTAGCAGAATGATTAACATGAC 57.680 36.000 0.00 0.00 39.69 3.06
979 4495 6.094719 GCATTGTACTTCAATCTGCATCAAA 58.905 36.000 0.00 0.00 43.93 2.69
997 4513 4.397420 TCAAGTGTGTTATCCTGCATTGT 58.603 39.130 0.00 0.00 0.00 2.71
999 4515 5.048504 CAGTTCAAGTGTGTTATCCTGCATT 60.049 40.000 0.00 0.00 0.00 3.56
1000 4516 4.456911 CAGTTCAAGTGTGTTATCCTGCAT 59.543 41.667 0.00 0.00 0.00 3.96
1001 4517 3.814842 CAGTTCAAGTGTGTTATCCTGCA 59.185 43.478 0.00 0.00 0.00 4.41
1002 4518 3.189287 CCAGTTCAAGTGTGTTATCCTGC 59.811 47.826 0.00 0.00 0.00 4.85
1003 4519 3.753272 CCCAGTTCAAGTGTGTTATCCTG 59.247 47.826 0.00 0.00 0.00 3.86
1004 4520 3.650942 TCCCAGTTCAAGTGTGTTATCCT 59.349 43.478 0.00 0.00 0.00 3.24
1061 4578 3.250762 GCAGCAAGCGATATTGATAACCA 59.749 43.478 0.00 0.00 31.55 3.67
1086 4603 8.681806 TGATCTAGACATGTTACTTGAAGAGAG 58.318 37.037 0.00 0.00 0.00 3.20
1237 4754 6.065976 AGTAATTTCACATGTGGAGATGGA 57.934 37.500 25.16 1.58 0.00 3.41
1565 5109 9.333724 GGACGAAAAATATACTTATCCCTTGAA 57.666 33.333 0.00 0.00 0.00 2.69
1567 5111 8.904099 AGGACGAAAAATATACTTATCCCTTG 57.096 34.615 0.00 0.00 0.00 3.61
1601 5145 6.657966 TGAGGTACGATTTCTATACCATCGAT 59.342 38.462 7.72 0.00 41.96 3.59
1602 5146 5.999600 TGAGGTACGATTTCTATACCATCGA 59.000 40.000 7.72 0.00 41.96 3.59
1607 5151 6.445475 GGAGTTGAGGTACGATTTCTATACC 58.555 44.000 0.00 0.00 38.98 2.73
1621 5165 1.070289 GAGTGGTTTCGGAGTTGAGGT 59.930 52.381 0.00 0.00 0.00 3.85
1641 5185 9.152595 GTTTAAATAGTAGAGGGACTGAGTTTG 57.847 37.037 0.00 0.00 41.55 2.93
1691 5235 4.035441 GTCGTACCAAAACCACTTTAAGCA 59.965 41.667 0.00 0.00 0.00 3.91
1727 5272 2.410730 CCACGTGGACGATTTTAGTCAC 59.589 50.000 31.31 0.00 43.02 3.67
1752 5297 5.365619 ACGGTCATACTTTCAGTCAAAACT 58.634 37.500 0.00 0.00 35.60 2.66
1766 5311 4.181578 AGACTGCACATTTACGGTCATAC 58.818 43.478 4.91 0.00 43.32 2.39
1768 5313 3.334583 AGACTGCACATTTACGGTCAT 57.665 42.857 4.91 0.00 43.32 3.06
1866 5485 8.579850 ACTTGAAGCAGACATCCAAAATATTA 57.420 30.769 0.00 0.00 0.00 0.98
1867 5486 7.472334 ACTTGAAGCAGACATCCAAAATATT 57.528 32.000 0.00 0.00 0.00 1.28
1868 5487 7.177216 TGAACTTGAAGCAGACATCCAAAATAT 59.823 33.333 0.00 0.00 0.00 1.28
1869 5488 6.489700 TGAACTTGAAGCAGACATCCAAAATA 59.510 34.615 0.00 0.00 0.00 1.40
1870 5489 5.302568 TGAACTTGAAGCAGACATCCAAAAT 59.697 36.000 0.00 0.00 0.00 1.82
1871 5490 4.644234 TGAACTTGAAGCAGACATCCAAAA 59.356 37.500 0.00 0.00 0.00 2.44
1872 5491 4.206375 TGAACTTGAAGCAGACATCCAAA 58.794 39.130 0.00 0.00 0.00 3.28
1873 5492 3.819368 TGAACTTGAAGCAGACATCCAA 58.181 40.909 0.00 0.00 0.00 3.53
1874 5493 3.490439 TGAACTTGAAGCAGACATCCA 57.510 42.857 0.00 0.00 0.00 3.41
1875 5494 4.836125 TTTGAACTTGAAGCAGACATCC 57.164 40.909 0.00 0.00 0.00 3.51
1876 5495 5.628193 CACATTTGAACTTGAAGCAGACATC 59.372 40.000 0.00 0.00 0.00 3.06
1877 5496 5.300034 TCACATTTGAACTTGAAGCAGACAT 59.700 36.000 0.00 0.00 0.00 3.06
1878 5497 4.639755 TCACATTTGAACTTGAAGCAGACA 59.360 37.500 0.00 0.00 0.00 3.41
1879 5498 4.972440 GTCACATTTGAACTTGAAGCAGAC 59.028 41.667 0.00 0.00 31.90 3.51
1880 5499 4.639755 TGTCACATTTGAACTTGAAGCAGA 59.360 37.500 0.00 0.00 31.90 4.26
1881 5500 4.923893 TGTCACATTTGAACTTGAAGCAG 58.076 39.130 0.00 0.00 31.90 4.24
1882 5501 4.398988 ACTGTCACATTTGAACTTGAAGCA 59.601 37.500 0.00 0.00 31.90 3.91
1883 5502 4.925068 ACTGTCACATTTGAACTTGAAGC 58.075 39.130 0.00 0.00 31.90 3.86
1884 5503 8.961092 CATTTACTGTCACATTTGAACTTGAAG 58.039 33.333 0.00 0.00 31.90 3.02
1885 5504 8.465999 ACATTTACTGTCACATTTGAACTTGAA 58.534 29.630 0.00 0.00 29.94 2.69
1886 5505 7.914871 CACATTTACTGTCACATTTGAACTTGA 59.085 33.333 0.00 0.00 35.29 3.02
1887 5506 7.306167 GCACATTTACTGTCACATTTGAACTTG 60.306 37.037 0.00 0.00 35.29 3.16
1888 5507 6.697019 GCACATTTACTGTCACATTTGAACTT 59.303 34.615 0.00 0.00 35.29 2.66
1889 5508 6.183360 TGCACATTTACTGTCACATTTGAACT 60.183 34.615 0.00 0.00 35.29 3.01
1890 5509 5.976534 TGCACATTTACTGTCACATTTGAAC 59.023 36.000 0.00 0.00 35.29 3.18
1891 5510 6.141560 TGCACATTTACTGTCACATTTGAA 57.858 33.333 0.00 0.00 35.29 2.69
1892 5511 5.299028 ACTGCACATTTACTGTCACATTTGA 59.701 36.000 0.00 0.00 35.29 2.69
1893 5512 5.522456 ACTGCACATTTACTGTCACATTTG 58.478 37.500 0.00 0.00 35.29 2.32
1894 5513 5.532406 AGACTGCACATTTACTGTCACATTT 59.468 36.000 1.93 0.00 35.29 2.32
1895 5514 5.065914 AGACTGCACATTTACTGTCACATT 58.934 37.500 1.93 0.00 35.29 2.71
1896 5515 4.645535 AGACTGCACATTTACTGTCACAT 58.354 39.130 1.93 0.00 35.29 3.21
1897 5516 4.071961 AGACTGCACATTTACTGTCACA 57.928 40.909 1.93 0.00 35.29 3.58
1898 5517 5.230942 ACTAGACTGCACATTTACTGTCAC 58.769 41.667 0.00 0.00 35.29 3.67
1899 5518 5.468540 ACTAGACTGCACATTTACTGTCA 57.531 39.130 0.00 0.00 35.29 3.58
1900 5519 5.926542 TCAACTAGACTGCACATTTACTGTC 59.073 40.000 0.00 0.00 35.29 3.51
1901 5520 5.853936 TCAACTAGACTGCACATTTACTGT 58.146 37.500 0.00 0.00 39.20 3.55
1902 5521 6.591448 TGATCAACTAGACTGCACATTTACTG 59.409 38.462 0.00 0.00 0.00 2.74
1903 5522 6.701340 TGATCAACTAGACTGCACATTTACT 58.299 36.000 0.00 0.00 0.00 2.24
1904 5523 6.968131 TGATCAACTAGACTGCACATTTAC 57.032 37.500 0.00 0.00 0.00 2.01
1905 5524 8.565896 AAATGATCAACTAGACTGCACATTTA 57.434 30.769 0.00 0.00 34.96 1.40
1906 5525 7.458409 AAATGATCAACTAGACTGCACATTT 57.542 32.000 0.00 10.83 32.92 2.32
1907 5526 7.201556 CGTAAATGATCAACTAGACTGCACATT 60.202 37.037 0.00 6.13 0.00 2.71
1908 5527 6.256539 CGTAAATGATCAACTAGACTGCACAT 59.743 38.462 0.00 0.63 0.00 3.21
1909 5528 5.576774 CGTAAATGATCAACTAGACTGCACA 59.423 40.000 0.00 0.00 0.00 4.57
1910 5529 5.005779 CCGTAAATGATCAACTAGACTGCAC 59.994 44.000 0.00 0.00 0.00 4.57
1911 5530 5.109210 CCGTAAATGATCAACTAGACTGCA 58.891 41.667 0.00 0.00 0.00 4.41
1912 5531 5.109903 ACCGTAAATGATCAACTAGACTGC 58.890 41.667 0.00 0.00 0.00 4.40
1913 5532 6.330278 TGACCGTAAATGATCAACTAGACTG 58.670 40.000 0.00 0.00 0.00 3.51
1914 5533 6.525578 TGACCGTAAATGATCAACTAGACT 57.474 37.500 0.00 0.00 0.00 3.24
1915 5534 7.277981 ACATTGACCGTAAATGATCAACTAGAC 59.722 37.037 14.63 0.00 38.21 2.59
1933 5552 2.642139 CACCAGATGCAACATTGACC 57.358 50.000 0.00 0.00 0.00 4.02
2267 9240 6.840527 TGAATGGGATTCATAGCAGATTGTA 58.159 36.000 0.00 0.00 43.84 2.41
2296 9269 9.797556 GATGGTTTAAGTTCCATACCATTTTAC 57.202 33.333 7.07 0.00 46.62 2.01
2306 9279 7.630082 TGCTAACTAGATGGTTTAAGTTCCAT 58.370 34.615 0.00 8.10 45.69 3.41
2463 9436 1.838112 TTGGTATGACGTAGACCCGT 58.162 50.000 9.77 0.00 40.03 5.28
2648 9624 2.364970 AGCCAAGCACAAACATTTAGCA 59.635 40.909 0.00 0.00 0.00 3.49
2656 9632 0.740737 ACAGTGAGCCAAGCACAAAC 59.259 50.000 0.00 0.00 38.70 2.93
2808 9784 5.163519 CCACTGAATTGTTTTCCTGAACTGT 60.164 40.000 0.00 0.00 0.00 3.55
3027 10080 7.118390 TGTTTCGTCAACAAATTTTCCAACAAT 59.882 29.630 1.15 0.00 42.76 2.71
3279 10341 6.951530 CGCTCAGTCAAATTTATTTGCAAATG 59.048 34.615 30.43 16.72 45.06 2.32
3293 10355 1.882912 AGAATGTGCGCTCAGTCAAA 58.117 45.000 32.76 5.14 35.30 2.69
3302 10364 3.124297 GCTATCCAGAATAGAATGTGCGC 59.876 47.826 0.00 0.00 39.94 6.09
3303 10365 3.366121 CGCTATCCAGAATAGAATGTGCG 59.634 47.826 0.00 0.00 39.94 5.34
3323 10385 3.064931 AGTTAGACTAGTTGTTTGCCGC 58.935 45.455 0.00 0.00 0.00 6.53
3360 10612 1.541233 GGAATAGATGGCCTGTGGTCG 60.541 57.143 3.32 0.00 0.00 4.79
3376 10628 9.736023 GAATAATAAATTCACAAGAAGCGGAAT 57.264 29.630 0.00 0.00 37.14 3.01
3432 10684 9.625747 TCATTCATTTTGTATGCCTACTGAATA 57.374 29.630 11.40 2.94 31.99 1.75
3434 10686 7.936496 TCATTCATTTTGTATGCCTACTGAA 57.064 32.000 0.74 3.06 0.00 3.02
3477 10735 0.872021 CGGCTACTGATGAGCGGAAC 60.872 60.000 0.00 0.00 41.42 3.62
3734 11674 6.432607 AAACATAGTCTGACATTCAGCATG 57.567 37.500 10.88 4.98 43.95 4.06
3735 11675 7.201679 GCTTAAACATAGTCTGACATTCAGCAT 60.202 37.037 10.88 0.00 43.95 3.79
3737 11677 6.314896 AGCTTAAACATAGTCTGACATTCAGC 59.685 38.462 10.88 8.80 43.95 4.26
3739 11679 9.890629 AATAGCTTAAACATAGTCTGACATTCA 57.109 29.630 10.88 0.00 0.00 2.57
3973 12768 2.423538 GGGTCAGATTGCGCTAAACAAT 59.576 45.455 9.73 0.00 40.37 2.71
3995 12794 8.093927 GGGACAAATCAGGAAAATTGTTGATTA 58.906 33.333 0.00 0.00 38.83 1.75
4174 12976 4.823989 CAGGCTTATAAGGTCTGGGAAATG 59.176 45.833 14.28 0.00 33.32 2.32
4496 13580 5.745312 TGAGCTGTCTAAAATGGAGAAGA 57.255 39.130 0.00 0.00 0.00 2.87
4677 13765 8.834749 AAAGACTTCCGCTCTAATAATAATCC 57.165 34.615 0.00 0.00 0.00 3.01
5042 14133 8.914654 CATATTTGAAGCAACATTTCTTTCGAA 58.085 29.630 0.00 0.00 0.00 3.71
5053 14144 7.140705 CACTTTCAGACATATTTGAAGCAACA 58.859 34.615 0.00 0.00 35.01 3.33
5072 14163 2.825205 AGCCAATGCAACAACACTTTC 58.175 42.857 0.00 0.00 41.13 2.62
5501 14615 4.463539 AGCATCTGGTTATCAATTTGTGCA 59.536 37.500 0.00 0.00 0.00 4.57
5510 14624 8.271458 TGAGGTTTAATTAGCATCTGGTTATCA 58.729 33.333 0.00 0.00 0.00 2.15
5684 14814 6.849085 TGCAACTATTTATTTCCACCACAT 57.151 33.333 0.00 0.00 0.00 3.21
5724 14854 9.515226 AATAGGAAAAGACAGTATTTGTAAGCA 57.485 29.630 0.00 0.00 41.05 3.91
5759 14912 1.376424 CCCAGCCTAGCACACACAG 60.376 63.158 0.00 0.00 0.00 3.66
5875 15036 6.441274 TGTGCATCAAAATTCTTCAAGACTC 58.559 36.000 0.00 0.00 0.00 3.36
5953 15114 4.691860 AGATTGAATATTATGCAGGCGC 57.308 40.909 0.00 0.00 39.24 6.53
5954 15115 6.245115 TCAAGATTGAATATTATGCAGGCG 57.755 37.500 0.00 0.00 33.55 5.52
5955 15116 6.432162 TCCTCAAGATTGAATATTATGCAGGC 59.568 38.462 0.00 0.00 36.64 4.85
5956 15117 7.991084 TCCTCAAGATTGAATATTATGCAGG 57.009 36.000 0.00 0.00 36.64 4.85
6026 15190 8.450964 GCTTCTAATTAATGTGCTCAGTACAAA 58.549 33.333 0.00 0.00 31.17 2.83
6060 15224 8.956533 TTAACATATGCACAGCAGTTCTATTA 57.043 30.769 1.58 0.00 43.65 0.98
6061 15225 7.864108 TTAACATATGCACAGCAGTTCTATT 57.136 32.000 1.58 0.00 43.65 1.73
6062 15226 7.864108 TTTAACATATGCACAGCAGTTCTAT 57.136 32.000 1.58 0.00 43.65 1.98
6063 15227 7.864108 ATTTAACATATGCACAGCAGTTCTA 57.136 32.000 1.58 0.00 43.65 2.10
6064 15228 6.764308 ATTTAACATATGCACAGCAGTTCT 57.236 33.333 1.58 0.00 43.65 3.01
6117 15929 1.302511 GTCGGCACAACCACAGGAT 60.303 57.895 0.00 0.00 39.03 3.24
6174 15987 6.228995 TGAGACATACGATACGATACTTCCT 58.771 40.000 0.00 0.00 0.00 3.36
6199 16012 4.038522 GCTTAGAGTGATGCCATGAGAGTA 59.961 45.833 0.00 0.00 0.00 2.59
6200 16013 3.181467 GCTTAGAGTGATGCCATGAGAGT 60.181 47.826 0.00 0.00 0.00 3.24
6201 16014 3.069872 AGCTTAGAGTGATGCCATGAGAG 59.930 47.826 0.00 0.00 0.00 3.20
6202 16015 3.036819 AGCTTAGAGTGATGCCATGAGA 58.963 45.455 0.00 0.00 0.00 3.27
6203 16016 3.132160 CAGCTTAGAGTGATGCCATGAG 58.868 50.000 0.00 0.00 0.00 2.90
6204 16017 2.158856 CCAGCTTAGAGTGATGCCATGA 60.159 50.000 0.00 0.00 0.00 3.07
6205 16018 2.158856 TCCAGCTTAGAGTGATGCCATG 60.159 50.000 0.00 0.00 0.00 3.66
6206 16019 2.121948 TCCAGCTTAGAGTGATGCCAT 58.878 47.619 0.00 0.00 0.00 4.40
6221 16034 7.888546 ACCCATATTTACCATTATAGTTCCAGC 59.111 37.037 0.00 0.00 0.00 4.85
6341 16156 8.110612 CACGACTTCATATGTCTGAACAATAAC 58.889 37.037 1.90 0.00 39.30 1.89
6364 16179 1.939934 ACCACACAACATCAGTTCACG 59.060 47.619 0.00 0.00 35.28 4.35
6423 16262 4.616953 ACAGGCCGAAAACAGTTTTAATG 58.383 39.130 11.38 8.43 31.94 1.90
6424 16263 4.929819 ACAGGCCGAAAACAGTTTTAAT 57.070 36.364 11.38 0.00 31.94 1.40
6433 16272 2.031420 GTCCTACAAACAGGCCGAAAAC 60.031 50.000 0.00 0.00 35.49 2.43
6561 16417 2.952310 GGGCCATCTGTCCAGATTAAAC 59.048 50.000 4.39 0.00 45.31 2.01
6826 16687 2.508439 ACATCAAGCGGCGTACGG 60.508 61.111 18.39 1.85 44.51 4.02
6871 16732 2.548057 ACACGTGCATCGATCACTTTTT 59.452 40.909 17.22 0.00 42.86 1.94
6872 16733 2.143122 ACACGTGCATCGATCACTTTT 58.857 42.857 17.22 6.78 42.86 2.27
6874 16735 2.094700 AGTACACGTGCATCGATCACTT 60.095 45.455 17.22 11.47 42.86 3.16
6875 16736 1.472878 AGTACACGTGCATCGATCACT 59.527 47.619 17.22 3.39 42.86 3.41
6876 16737 1.909376 AGTACACGTGCATCGATCAC 58.091 50.000 17.22 14.33 42.86 3.06
6877 16738 3.488553 CCTTAGTACACGTGCATCGATCA 60.489 47.826 17.22 0.00 42.86 2.92
6880 16741 1.468565 GCCTTAGTACACGTGCATCGA 60.469 52.381 17.22 0.00 42.86 3.59
6881 16742 0.921347 GCCTTAGTACACGTGCATCG 59.079 55.000 17.22 7.07 46.00 3.84
6882 16743 1.287425 GGCCTTAGTACACGTGCATC 58.713 55.000 17.22 6.28 0.00 3.91
6886 16747 2.634982 TAACGGCCTTAGTACACGTG 57.365 50.000 15.48 15.48 37.87 4.49
6888 16749 2.533266 CCTTAACGGCCTTAGTACACG 58.467 52.381 0.00 0.00 0.00 4.49
6908 16769 4.681978 AGTCTCCCCAACGCGTGC 62.682 66.667 14.98 0.00 0.00 5.34
6909 16770 2.738521 CAGTCTCCCCAACGCGTG 60.739 66.667 14.98 7.16 0.00 5.34
6913 16774 3.611766 AATAAGACAGTCTCCCCAACG 57.388 47.619 2.72 0.00 0.00 4.10
6942 16803 4.970003 CACAGCTGCAAACAAACTTAGTAC 59.030 41.667 15.27 0.00 0.00 2.73
6944 16805 3.181487 CCACAGCTGCAAACAAACTTAGT 60.181 43.478 15.27 0.00 0.00 2.24
6945 16806 3.181487 ACCACAGCTGCAAACAAACTTAG 60.181 43.478 15.27 0.00 0.00 2.18
7001 16862 5.629020 TGTACGTTGTACCGATGTTTCTTAC 59.371 40.000 0.00 0.00 0.00 2.34
7020 16881 1.792006 GTTGGGGTCAGACTTGTACG 58.208 55.000 0.00 0.00 0.00 3.67
7021 16882 1.342174 TCGTTGGGGTCAGACTTGTAC 59.658 52.381 0.00 0.00 0.00 2.90
7024 16885 0.393077 AGTCGTTGGGGTCAGACTTG 59.607 55.000 0.00 0.00 40.64 3.16
7082 16943 0.324943 GCTACTCAACTTGGCCCTCA 59.675 55.000 0.00 0.00 0.00 3.86
7089 16950 3.657634 TCTTCTGCTGCTACTCAACTTG 58.342 45.455 0.00 0.00 0.00 3.16
7146 17007 1.329906 CTGCGATGCTGATGAAACCTC 59.670 52.381 0.00 0.00 0.00 3.85
7164 17025 2.847327 TCCTGAGCAGAAAAGGACTG 57.153 50.000 0.00 0.00 35.14 3.51
7296 17157 6.161381 AGTGCTGATATTGCTTTCTTTTTGG 58.839 36.000 3.85 0.00 0.00 3.28
7297 17158 6.309737 GGAGTGCTGATATTGCTTTCTTTTTG 59.690 38.462 3.85 0.00 0.00 2.44
7301 17162 4.592942 TGGAGTGCTGATATTGCTTTCTT 58.407 39.130 3.85 0.00 0.00 2.52
7303 17164 4.970662 TTGGAGTGCTGATATTGCTTTC 57.029 40.909 3.85 2.16 0.00 2.62
7383 17278 4.756642 TGTGTGTTTGCCAAAATTTGTGAA 59.243 33.333 4.92 0.00 0.00 3.18
7385 17280 4.675190 TGTGTGTTTGCCAAAATTTGTG 57.325 36.364 4.92 0.00 0.00 3.33
7425 17320 3.396260 AAATCTGCAATGCTTTGTGCT 57.604 38.095 6.82 0.00 41.48 4.40
7426 17321 4.212636 AGAAAAATCTGCAATGCTTTGTGC 59.787 37.500 6.82 2.09 41.29 4.57
7464 17359 9.730420 GCTCTTGATGAACAGTAAAACTAAAAA 57.270 29.630 0.00 0.00 0.00 1.94
7465 17360 8.349983 GGCTCTTGATGAACAGTAAAACTAAAA 58.650 33.333 0.00 0.00 0.00 1.52
7466 17361 7.500892 TGGCTCTTGATGAACAGTAAAACTAAA 59.499 33.333 0.00 0.00 0.00 1.85
7467 17362 6.995686 TGGCTCTTGATGAACAGTAAAACTAA 59.004 34.615 0.00 0.00 0.00 2.24
7468 17363 6.530120 TGGCTCTTGATGAACAGTAAAACTA 58.470 36.000 0.00 0.00 0.00 2.24
7513 17408 1.801913 CTTTCGTGCCGTCGGAGAG 60.802 63.158 17.49 4.63 36.95 3.20
7544 17439 0.743097 GGTGGATCTTCAAGGCATGC 59.257 55.000 9.90 9.90 0.00 4.06
7580 17475 3.248630 TTAGCTTGCGCACCGTTGC 62.249 57.895 11.12 10.03 46.21 4.17
7583 17478 2.027625 GAGTTAGCTTGCGCACCGT 61.028 57.895 11.12 0.00 39.10 4.83
7590 17485 3.632189 CAACACAAAGGAGTTAGCTTGC 58.368 45.455 0.00 0.00 0.00 4.01
7593 17488 2.930950 TGCAACACAAAGGAGTTAGCT 58.069 42.857 0.00 0.00 0.00 3.32
7619 17514 1.696832 GACGAGCGCTGGATTTCACC 61.697 60.000 26.95 1.18 0.00 4.02
7661 17563 0.878523 TGGTCGACGGAAGCAACAAG 60.879 55.000 9.92 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.