Multiple sequence alignment - TraesCS3B01G083500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G083500 chr3B 100.000 7628 0 0 1 7628 52745629 52738002 0.000000e+00 14087.0
1 TraesCS3B01G083500 chr3B 96.411 2480 82 3 2780 5254 51856895 51859372 0.000000e+00 4080.0
2 TraesCS3B01G083500 chr3B 83.395 3240 469 40 2980 6189 51727041 51730241 0.000000e+00 2939.0
3 TraesCS3B01G083500 chr3B 82.995 3152 485 39 2952 6074 52777782 52774653 0.000000e+00 2804.0
4 TraesCS3B01G083500 chr3B 82.864 3087 495 27 2952 6017 52853744 52850671 0.000000e+00 2739.0
5 TraesCS3B01G083500 chr3B 82.636 3081 510 17 2952 6018 52426299 52429368 0.000000e+00 2702.0
6 TraesCS3B01G083500 chr3B 81.537 1614 263 25 4444 6036 52415613 52417212 0.000000e+00 1297.0
7 TraesCS3B01G083500 chr3B 92.798 486 20 3 5989 6469 51859915 51860390 0.000000e+00 689.0
8 TraesCS3B01G083500 chr3B 78.119 1042 191 12 5081 6114 52166548 52167560 1.810000e-175 627.0
9 TraesCS3B01G083500 chr3B 81.057 776 140 5 5268 6038 52456923 52457696 5.060000e-171 612.0
10 TraesCS3B01G083500 chr3B 83.892 627 51 23 6536 7142 51860412 51861008 3.110000e-153 553.0
11 TraesCS3B01G083500 chr3B 88.043 368 26 4 2151 2517 51856368 51856718 3.290000e-113 420.0
12 TraesCS3B01G083500 chr3B 94.776 268 11 2 1684 1948 51856101 51856368 1.530000e-111 414.0
13 TraesCS3B01G083500 chr3B 90.722 291 21 4 1 290 51855622 51855907 4.320000e-102 383.0
14 TraesCS3B01G083500 chr3B 96.571 175 6 0 1518 1692 523154204 523154378 2.690000e-74 291.0
15 TraesCS3B01G083500 chr3B 94.167 120 4 1 1406 1525 51855985 51856101 6.080000e-41 180.0
16 TraesCS3B01G083500 chr3B 98.718 78 1 0 1278 1355 156649800 156649877 1.030000e-28 139.0
17 TraesCS3B01G083500 chr3B 97.531 81 2 0 1275 1355 520150014 520149934 1.030000e-28 139.0
18 TraesCS3B01G083500 chr3B 93.333 90 4 2 1267 1355 176920244 176920156 1.730000e-26 132.0
19 TraesCS3B01G083500 chr3B 92.308 91 7 0 1274 1364 187152505 187152415 6.210000e-26 130.0
20 TraesCS3B01G083500 chr3B 100.000 28 0 0 6485 6512 51860388 51860415 1.400000e-02 52.8
21 TraesCS3B01G083500 chr3D 95.811 3485 133 3 2784 6255 30278115 30281599 0.000000e+00 5614.0
22 TraesCS3B01G083500 chr3D 86.691 1082 103 26 6563 7628 30287875 30288931 0.000000e+00 1162.0
23 TraesCS3B01G083500 chr3D 78.845 1541 279 34 4759 6277 30060226 30061741 0.000000e+00 996.0
24 TraesCS3B01G083500 chr3D 83.318 1055 95 25 1686 2698 30277097 30278112 0.000000e+00 898.0
25 TraesCS3B01G083500 chr3D 88.212 755 53 20 163 896 30275788 30276527 0.000000e+00 869.0
26 TraesCS3B01G083500 chr3D 83.895 267 34 5 6373 6638 30062174 30062432 5.910000e-61 246.0
27 TraesCS3B01G083500 chr3D 92.929 99 4 3 2689 2786 400684035 400683939 2.870000e-29 141.0
28 TraesCS3B01G083500 chr3D 84.071 113 12 3 893 1005 30276573 30276679 3.770000e-18 104.0
29 TraesCS3B01G083500 chr3D 87.013 77 5 3 7150 7225 11821500 11821428 1.760000e-11 82.4
30 TraesCS3B01G083500 chr3D 87.838 74 3 1 6289 6356 30281607 30281680 1.760000e-11 82.4
31 TraesCS3B01G083500 chr3A 95.402 3480 153 3 2780 6255 42016709 42020185 0.000000e+00 5533.0
32 TraesCS3B01G083500 chr3A 82.589 3360 531 34 2790 6114 40936175 40939515 0.000000e+00 2915.0
33 TraesCS3B01G083500 chr3A 82.312 3149 519 26 2898 6018 41149873 41153011 0.000000e+00 2695.0
34 TraesCS3B01G083500 chr3A 82.378 3087 506 23 2952 6017 41537198 41540267 0.000000e+00 2652.0
35 TraesCS3B01G083500 chr3A 86.117 1030 93 24 1706 2699 42015696 42016711 0.000000e+00 1064.0
36 TraesCS3B01G083500 chr3A 87.757 923 56 43 1 896 42014198 42015090 0.000000e+00 1026.0
37 TraesCS3B01G083500 chr3A 81.528 563 60 19 6373 6932 41626509 41627030 2.540000e-114 424.0
38 TraesCS3B01G083500 chr3A 91.154 260 21 2 7230 7488 42021076 42021334 1.220000e-92 351.0
39 TraesCS3B01G083500 chr3A 78.356 596 84 29 6563 7154 42020477 42021031 2.040000e-90 344.0
40 TraesCS3B01G083500 chr3A 90.435 115 6 5 943 1055 42015243 42015354 6.170000e-31 147.0
41 TraesCS3B01G083500 chr3A 83.621 116 14 5 893 1005 42015139 42015252 3.770000e-18 104.0
42 TraesCS3B01G083500 chr3A 93.103 58 4 0 1344 1401 41533127 41533184 1.360000e-12 86.1
43 TraesCS3B01G083500 chr3A 90.625 64 5 1 1464 1526 42015589 42015652 4.910000e-12 84.2
44 TraesCS3B01G083500 chr3A 85.714 84 6 1 6279 6356 42020187 42020270 4.910000e-12 84.2
45 TraesCS3B01G083500 chr3A 86.250 80 6 3 7147 7225 25151427 25151502 1.760000e-11 82.4
46 TraesCS3B01G083500 chr3A 91.071 56 4 1 1686 1741 42015647 42015701 2.950000e-09 75.0
47 TraesCS3B01G083500 chr3A 100.000 28 0 0 6853 6880 41241353 41241380 1.400000e-02 52.8
48 TraesCS3B01G083500 chr5D 98.225 169 3 0 1519 1687 198477556 198477388 5.790000e-76 296.0
49 TraesCS3B01G083500 chr5D 94.565 92 4 1 2695 2786 446918169 446918259 2.870000e-29 141.0
50 TraesCS3B01G083500 chr5D 92.784 97 6 1 2691 2786 350331956 350331860 1.030000e-28 139.0
51 TraesCS3B01G083500 chr5D 89.062 64 5 2 7173 7235 3244600 3244538 2.280000e-10 78.7
52 TraesCS3B01G083500 chr5D 90.741 54 3 2 7173 7224 2586898 2586951 3.820000e-08 71.3
53 TraesCS3B01G083500 chr2B 98.204 167 3 0 1524 1690 540428425 540428259 7.490000e-75 292.0
54 TraesCS3B01G083500 chr2B 93.182 88 6 0 1278 1365 765212093 765212006 6.210000e-26 130.0
55 TraesCS3B01G083500 chr2B 85.556 90 6 3 7150 7232 724550923 724551012 3.790000e-13 87.9
56 TraesCS3B01G083500 chr2A 97.110 173 5 0 1521 1693 632622279 632622107 7.490000e-75 292.0
57 TraesCS3B01G083500 chr2A 97.093 172 5 0 1516 1687 113822287 113822458 2.690000e-74 291.0
58 TraesCS3B01G083500 chr2A 87.209 86 4 3 7148 7226 632931782 632931697 2.930000e-14 91.6
59 TraesCS3B01G083500 chr6D 95.109 184 7 2 1511 1692 260024496 260024679 9.680000e-74 289.0
60 TraesCS3B01G083500 chr6D 98.039 51 1 0 7169 7219 471069878 471069928 1.050000e-13 89.8
61 TraesCS3B01G083500 chr6D 97.917 48 1 0 7172 7219 203859054 203859007 4.910000e-12 84.2
62 TraesCS3B01G083500 chr6D 92.593 54 4 0 7171 7224 3143080 3143027 2.280000e-10 78.7
63 TraesCS3B01G083500 chr6D 91.489 47 4 0 7171 7217 77707248 77707202 1.780000e-06 65.8
64 TraesCS3B01G083500 chr6D 90.000 50 4 1 7186 7234 72021771 72021722 6.390000e-06 63.9
65 TraesCS3B01G083500 chr6D 92.308 39 3 0 7172 7210 140161623 140161661 1.000000e-03 56.5
66 TraesCS3B01G083500 chr6D 100.000 29 0 0 7172 7200 365711059 365711031 4.000000e-03 54.7
67 TraesCS3B01G083500 chr6A 95.580 181 6 2 1514 1692 370675615 370675435 9.680000e-74 289.0
68 TraesCS3B01G083500 chr6A 85.897 78 3 6 7150 7219 55552550 55552627 8.210000e-10 76.8
69 TraesCS3B01G083500 chr6A 88.406 69 1 3 7150 7211 615888538 615888606 8.210000e-10 76.8
70 TraesCS3B01G083500 chr1B 96.067 178 6 1 1511 1687 67054062 67053885 9.680000e-74 289.0
71 TraesCS3B01G083500 chr1B 92.553 94 6 1 1272 1365 146949870 146949962 4.800000e-27 134.0
72 TraesCS3B01G083500 chr1B 93.548 62 4 0 1344 1405 679459962 679460023 8.150000e-15 93.5
73 TraesCS3B01G083500 chr1B 86.076 79 4 3 7148 7219 571427589 571427511 2.280000e-10 78.7
74 TraesCS3B01G083500 chr4A 95.531 179 6 2 1512 1688 676920810 676920988 1.250000e-72 285.0
75 TraesCS3B01G083500 chr5B 95.556 90 4 0 2693 2782 62940319 62940408 2.220000e-30 145.0
76 TraesCS3B01G083500 chr5B 95.349 86 4 0 1280 1365 368719986 368720071 3.710000e-28 137.0
77 TraesCS3B01G083500 chr5B 96.552 58 2 0 1344 1401 101547682 101547625 6.300000e-16 97.1
78 TraesCS3B01G083500 chr5B 94.828 58 3 0 1344 1401 448285122 448285179 2.930000e-14 91.6
79 TraesCS3B01G083500 chr5B 86.420 81 5 5 7150 7224 32477227 32477147 4.910000e-12 84.2
80 TraesCS3B01G083500 chr5B 88.158 76 2 3 7151 7219 216845459 216845534 4.910000e-12 84.2
81 TraesCS3B01G083500 chr7B 96.512 86 3 0 2697 2782 639796199 639796284 7.980000e-30 143.0
82 TraesCS3B01G083500 chr1A 93.684 95 5 1 2689 2783 551582349 551582256 2.870000e-29 141.0
83 TraesCS3B01G083500 chr1A 87.209 86 4 3 7148 7226 42512635 42512550 2.930000e-14 91.6
84 TraesCS3B01G083500 chr1A 93.220 59 4 0 1344 1402 533901920 533901862 3.790000e-13 87.9
85 TraesCS3B01G083500 chr1A 95.918 49 2 0 7171 7219 587861337 587861385 6.350000e-11 80.5
86 TraesCS3B01G083500 chr1A 97.778 45 1 0 7173 7217 58933954 58933910 2.280000e-10 78.7
87 TraesCS3B01G083500 chr1A 88.235 68 5 3 7168 7235 560819127 560819191 2.280000e-10 78.7
88 TraesCS3B01G083500 chr1A 82.979 94 9 3 7148 7234 587861397 587861304 2.280000e-10 78.7
89 TraesCS3B01G083500 chr1A 88.525 61 7 0 7172 7232 478362889 478362949 2.950000e-09 75.0
90 TraesCS3B01G083500 chr5A 92.784 97 6 1 2691 2786 450750799 450750703 1.030000e-28 139.0
91 TraesCS3B01G083500 chr5A 88.496 113 9 4 2695 2805 436259258 436259148 4.800000e-27 134.0
92 TraesCS3B01G083500 chr1D 92.784 97 5 2 2687 2782 415688348 415688443 1.030000e-28 139.0
93 TraesCS3B01G083500 chr1D 85.897 78 4 3 7149 7219 358222551 358222628 8.210000e-10 76.8
94 TraesCS3B01G083500 chr1D 94.000 50 1 2 7171 7219 29919596 29919548 2.950000e-09 75.0
95 TraesCS3B01G083500 chr1D 93.750 48 2 1 7172 7219 9865129 9865175 3.820000e-08 71.3
96 TraesCS3B01G083500 chr6B 95.294 85 4 0 1281 1365 716973795 716973711 1.340000e-27 135.0
97 TraesCS3B01G083500 chr4B 92.391 92 5 2 1275 1365 670389379 670389289 6.210000e-26 130.0
98 TraesCS3B01G083500 chr4B 96.610 59 2 0 1344 1402 25925102 25925160 1.750000e-16 99.0
99 TraesCS3B01G083500 chr4B 94.915 59 3 0 1344 1402 670389266 670389208 8.150000e-15 93.5
100 TraesCS3B01G083500 chr4B 87.805 82 3 3 7145 7219 650697385 650697304 1.050000e-13 89.8
101 TraesCS3B01G083500 chr4B 93.220 59 4 0 1343 1401 504897448 504897390 3.790000e-13 87.9
102 TraesCS3B01G083500 chr7A 93.103 58 4 0 1344 1401 646679298 646679355 1.360000e-12 86.1
103 TraesCS3B01G083500 chr7A 87.013 77 3 3 7150 7219 252187600 252187676 6.350000e-11 80.5
104 TraesCS3B01G083500 chr7A 84.524 84 6 3 7150 7226 8523384 8523467 8.210000e-10 76.8
105 TraesCS3B01G083500 chr7D 88.889 72 1 3 7148 7212 236829891 236829962 1.760000e-11 82.4
106 TraesCS3B01G083500 chr7D 87.143 70 8 1 7151 7219 195649858 195649789 2.280000e-10 78.7
107 TraesCS3B01G083500 chr2D 86.076 79 4 4 7148 7219 572682955 572683033 2.280000e-10 78.7
108 TraesCS3B01G083500 chr4D 95.745 47 2 0 7172 7218 489181736 489181782 8.210000e-10 76.8
109 TraesCS3B01G083500 chr4D 95.652 46 1 1 7173 7218 286970447 286970491 1.060000e-08 73.1
110 TraesCS3B01G083500 chr4D 93.750 48 2 1 7173 7219 249166910 249166863 3.820000e-08 71.3
111 TraesCS3B01G083500 chr4D 93.617 47 1 2 7173 7218 332387917 332387872 1.370000e-07 69.4
112 TraesCS3B01G083500 chrUn 93.617 47 3 0 7172 7218 110322416 110322462 3.820000e-08 71.3
113 TraesCS3B01G083500 chrUn 89.474 57 3 3 7163 7217 117172475 117172530 1.370000e-07 69.4
114 TraesCS3B01G083500 chrUn 100.000 36 0 0 7184 7219 31931900 31931865 4.940000e-07 67.6
115 TraesCS3B01G083500 chrUn 100.000 30 0 0 7189 7218 10136506 10136477 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G083500 chr3B 52738002 52745629 7627 True 14087.000 14087 100.000000 1 7628 1 chr3B.!!$R1 7627
1 TraesCS3B01G083500 chr3B 51727041 51730241 3200 False 2939.000 2939 83.395000 2980 6189 1 chr3B.!!$F1 3209
2 TraesCS3B01G083500 chr3B 52774653 52777782 3129 True 2804.000 2804 82.995000 2952 6074 1 chr3B.!!$R2 3122
3 TraesCS3B01G083500 chr3B 52850671 52853744 3073 True 2739.000 2739 82.864000 2952 6017 1 chr3B.!!$R3 3065
4 TraesCS3B01G083500 chr3B 52426299 52429368 3069 False 2702.000 2702 82.636000 2952 6018 1 chr3B.!!$F4 3066
5 TraesCS3B01G083500 chr3B 52415613 52417212 1599 False 1297.000 1297 81.537000 4444 6036 1 chr3B.!!$F3 1592
6 TraesCS3B01G083500 chr3B 51855622 51861008 5386 False 846.475 4080 92.601125 1 7142 8 chr3B.!!$F8 7141
7 TraesCS3B01G083500 chr3B 52166548 52167560 1012 False 627.000 627 78.119000 5081 6114 1 chr3B.!!$F2 1033
8 TraesCS3B01G083500 chr3B 52456923 52457696 773 False 612.000 612 81.057000 5268 6038 1 chr3B.!!$F5 770
9 TraesCS3B01G083500 chr3D 30275788 30281680 5892 False 1513.480 5614 87.850000 163 6356 5 chr3D.!!$F3 6193
10 TraesCS3B01G083500 chr3D 30287875 30288931 1056 False 1162.000 1162 86.691000 6563 7628 1 chr3D.!!$F1 1065
11 TraesCS3B01G083500 chr3D 30060226 30062432 2206 False 621.000 996 81.370000 4759 6638 2 chr3D.!!$F2 1879
12 TraesCS3B01G083500 chr3A 40936175 40939515 3340 False 2915.000 2915 82.589000 2790 6114 1 chr3A.!!$F2 3324
13 TraesCS3B01G083500 chr3A 41149873 41153011 3138 False 2695.000 2695 82.312000 2898 6018 1 chr3A.!!$F3 3120
14 TraesCS3B01G083500 chr3A 41537198 41540267 3069 False 2652.000 2652 82.378000 2952 6017 1 chr3A.!!$F6 3065
15 TraesCS3B01G083500 chr3A 42014198 42021334 7136 False 881.240 5533 88.025200 1 7488 10 chr3A.!!$F8 7487
16 TraesCS3B01G083500 chr3A 41626509 41627030 521 False 424.000 424 81.528000 6373 6932 1 chr3A.!!$F7 559

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
101 104 1.081906 TGACGCGGACTTCGTACAC 60.082 57.895 12.47 0.0 40.59 2.90 F
1078 1220 0.535780 TGCTCAAGCTCAACACTGGG 60.536 55.000 3.32 0.0 42.66 4.45 F
1170 1312 0.107945 GCCCTCTCTGTTTCGCTCAT 60.108 55.000 0.00 0.0 0.00 2.90 F
1298 1496 0.115745 ACTACTCCCTCCGTTCCCAA 59.884 55.000 0.00 0.0 0.00 4.12 F
2369 2634 0.321653 GTGATGGGTTGGTCGAAGCT 60.322 55.000 0.00 0.0 32.27 3.74 F
4354 4662 0.610232 ATGGAGCAACAAGGTCAGCC 60.610 55.000 0.00 0.0 46.51 4.85 F
5826 6148 0.394899 GGATTGTGAAGGCCTGGAGG 60.395 60.000 5.69 0.0 38.53 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1151 1293 0.107945 ATGAGCGAAACAGAGAGGGC 60.108 55.000 0.00 0.00 0.00 5.19 R
2088 2346 0.967887 CAAGAGGAGAGAGGCACGGA 60.968 60.000 0.00 0.00 0.00 4.69 R
2246 2511 1.077285 CCATGCTGCCATCACCTGA 60.077 57.895 0.00 0.00 0.00 3.86 R
2950 3241 1.943116 CTCAGCTCAGGAGACCCACG 61.943 65.000 0.00 0.00 34.24 4.94 R
4358 4666 0.034059 ACCCTTCTGCTGTGTCTTCG 59.966 55.000 0.00 0.00 0.00 3.79 R
6265 6602 2.016318 CGGTACATGCATGTGGACATT 58.984 47.619 36.72 14.89 41.89 2.71 R
6689 7413 0.035630 CTCTGGCCCCAAGTTCAGAG 60.036 60.000 0.00 0.00 44.50 3.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
101 104 1.081906 TGACGCGGACTTCGTACAC 60.082 57.895 12.47 0.00 40.59 2.90
102 105 1.208614 GACGCGGACTTCGTACACT 59.791 57.895 12.47 0.00 40.59 3.55
106 109 2.095059 ACGCGGACTTCGTACACTATTT 60.095 45.455 12.47 0.00 41.72 1.40
161 164 9.482627 TTTCTTTTCTTTGAGTTTTTACTGCAA 57.517 25.926 0.00 0.00 0.00 4.08
356 365 9.848172 GTGCAAACACTTTTTAAATCATACAAG 57.152 29.630 0.00 0.00 43.85 3.16
455 465 2.928757 TGTGCAGCACAATGTTTTTGTC 59.071 40.909 26.34 0.00 41.69 3.18
513 524 3.924073 GCCCCAAAATACGTGAACATTTC 59.076 43.478 0.00 0.00 0.00 2.17
551 563 6.681777 AGTGGACATCTTTTATTCTGTTTGC 58.318 36.000 0.00 0.00 0.00 3.68
553 565 5.471797 TGGACATCTTTTATTCTGTTTGCGA 59.528 36.000 0.00 0.00 0.00 5.10
557 569 9.722056 GACATCTTTTATTCTGTTTGCGATTAT 57.278 29.630 0.00 0.00 0.00 1.28
558 570 9.722056 ACATCTTTTATTCTGTTTGCGATTATC 57.278 29.630 0.00 0.00 0.00 1.75
608 628 8.907222 ATTTTTATGTTTTTCATCTTGCCTGT 57.093 26.923 0.00 0.00 37.91 4.00
609 629 8.729805 TTTTTATGTTTTTCATCTTGCCTGTT 57.270 26.923 0.00 0.00 37.91 3.16
674 696 5.629849 ACACGACGAACATTTTTGAAAAACA 59.370 32.000 5.08 0.00 0.00 2.83
849 878 3.309954 GCGAGTTATAGAGGCACCTTTTG 59.690 47.826 0.00 0.00 0.00 2.44
889 919 3.721706 AGCTCGGGCCAGGGAAAG 61.722 66.667 7.07 0.00 39.73 2.62
891 921 3.009115 CTCGGGCCAGGGAAAGGA 61.009 66.667 4.39 0.00 0.00 3.36
1010 1146 4.828925 GCGGCTGGGCTCTGACTC 62.829 72.222 0.00 0.00 0.00 3.36
1055 1197 1.684049 CTGGAGAGAAGCGGAGGGT 60.684 63.158 0.00 0.00 0.00 4.34
1056 1198 1.954362 CTGGAGAGAAGCGGAGGGTG 61.954 65.000 0.00 0.00 0.00 4.61
1057 1199 2.185608 GAGAGAAGCGGAGGGTGC 59.814 66.667 0.00 0.00 0.00 5.01
1059 1201 4.070552 GAGAAGCGGAGGGTGCGT 62.071 66.667 0.00 0.00 37.44 5.24
1060 1202 4.379243 AGAAGCGGAGGGTGCGTG 62.379 66.667 0.00 0.00 37.44 5.34
1065 1207 4.680237 CGGAGGGTGCGTGCTCAA 62.680 66.667 0.00 0.00 0.00 3.02
1067 1209 3.426568 GAGGGTGCGTGCTCAAGC 61.427 66.667 0.89 0.89 42.50 4.01
1068 1210 3.890936 GAGGGTGCGTGCTCAAGCT 62.891 63.158 9.02 0.00 42.66 3.74
1069 1211 3.426568 GGGTGCGTGCTCAAGCTC 61.427 66.667 9.02 5.51 42.66 4.09
1070 1212 2.666190 GGTGCGTGCTCAAGCTCA 60.666 61.111 9.02 0.00 42.66 4.26
1072 1214 1.082496 GTGCGTGCTCAAGCTCAAC 60.082 57.895 9.02 0.00 42.66 3.18
1073 1215 1.523484 TGCGTGCTCAAGCTCAACA 60.523 52.632 9.02 0.00 42.66 3.33
1074 1216 1.082496 GCGTGCTCAAGCTCAACAC 60.082 57.895 3.32 0.00 42.66 3.32
1075 1217 1.502163 GCGTGCTCAAGCTCAACACT 61.502 55.000 3.32 0.00 42.66 3.55
1077 1219 0.590195 GTGCTCAAGCTCAACACTGG 59.410 55.000 3.32 0.00 42.66 4.00
1078 1220 0.535780 TGCTCAAGCTCAACACTGGG 60.536 55.000 3.32 0.00 42.66 4.45
1079 1221 1.239968 GCTCAAGCTCAACACTGGGG 61.240 60.000 0.00 0.00 38.21 4.96
1080 1222 1.228245 TCAAGCTCAACACTGGGGC 60.228 57.895 0.00 0.00 0.00 5.80
1081 1223 1.529010 CAAGCTCAACACTGGGGCA 60.529 57.895 0.00 0.00 0.00 5.36
1083 1225 2.674380 GCTCAACACTGGGGCAGG 60.674 66.667 0.00 0.00 35.51 4.85
1084 1226 2.839098 CTCAACACTGGGGCAGGT 59.161 61.111 0.00 0.00 35.51 4.00
1085 1227 1.302832 CTCAACACTGGGGCAGGTC 60.303 63.158 0.00 0.00 35.51 3.85
1086 1228 2.055689 CTCAACACTGGGGCAGGTCA 62.056 60.000 0.00 0.00 35.51 4.02
1088 1230 2.078665 AACACTGGGGCAGGTCAGT 61.079 57.895 0.00 0.00 44.12 3.41
1121 1263 4.742201 CCGTCGACACCCCTGCTG 62.742 72.222 17.16 0.00 0.00 4.41
1142 1284 3.481903 CGCAATCGCTGTCGTGCT 61.482 61.111 0.00 0.00 36.10 4.40
1143 1285 2.097160 GCAATCGCTGTCGTGCTG 59.903 61.111 0.00 0.00 35.59 4.41
1144 1286 2.671177 GCAATCGCTGTCGTGCTGT 61.671 57.895 0.00 0.00 35.59 4.40
1145 1287 1.417592 CAATCGCTGTCGTGCTGTC 59.582 57.895 0.00 0.00 36.96 3.51
1146 1288 2.088763 AATCGCTGTCGTGCTGTCG 61.089 57.895 0.00 0.00 36.96 4.35
1150 1292 4.662961 CTGTCGTGCTGTCGCCCA 62.663 66.667 0.00 0.00 34.43 5.36
1151 1293 4.662961 TGTCGTGCTGTCGCCCAG 62.663 66.667 0.00 0.00 44.53 4.45
1158 1300 4.154347 CTGTCGCCCAGCCCTCTC 62.154 72.222 0.00 0.00 33.59 3.20
1159 1301 4.704103 TGTCGCCCAGCCCTCTCT 62.704 66.667 0.00 0.00 0.00 3.10
1160 1302 4.154347 GTCGCCCAGCCCTCTCTG 62.154 72.222 0.00 0.00 0.00 3.35
1161 1303 4.704103 TCGCCCAGCCCTCTCTGT 62.704 66.667 0.00 0.00 32.32 3.41
1162 1304 3.710722 CGCCCAGCCCTCTCTGTT 61.711 66.667 0.00 0.00 32.32 3.16
1163 1305 2.759795 GCCCAGCCCTCTCTGTTT 59.240 61.111 0.00 0.00 32.32 2.83
1164 1306 1.377856 GCCCAGCCCTCTCTGTTTC 60.378 63.158 0.00 0.00 32.32 2.78
1165 1307 1.078848 CCCAGCCCTCTCTGTTTCG 60.079 63.158 0.00 0.00 32.32 3.46
1166 1308 1.743252 CCAGCCCTCTCTGTTTCGC 60.743 63.158 0.00 0.00 32.32 4.70
1167 1309 1.294780 CAGCCCTCTCTGTTTCGCT 59.705 57.895 0.00 0.00 0.00 4.93
1168 1310 0.739112 CAGCCCTCTCTGTTTCGCTC 60.739 60.000 0.00 0.00 0.00 5.03
1169 1311 1.188219 AGCCCTCTCTGTTTCGCTCA 61.188 55.000 0.00 0.00 0.00 4.26
1170 1312 0.107945 GCCCTCTCTGTTTCGCTCAT 60.108 55.000 0.00 0.00 0.00 2.90
1171 1313 1.933247 CCCTCTCTGTTTCGCTCATC 58.067 55.000 0.00 0.00 0.00 2.92
1172 1314 1.205655 CCCTCTCTGTTTCGCTCATCA 59.794 52.381 0.00 0.00 0.00 3.07
1173 1315 2.266554 CCTCTCTGTTTCGCTCATCAC 58.733 52.381 0.00 0.00 0.00 3.06
1174 1316 1.916651 CTCTCTGTTTCGCTCATCACG 59.083 52.381 0.00 0.00 0.00 4.35
1175 1317 0.368227 CTCTGTTTCGCTCATCACGC 59.632 55.000 0.00 0.00 0.00 5.34
1176 1318 1.014044 TCTGTTTCGCTCATCACGCC 61.014 55.000 0.00 0.00 0.00 5.68
1177 1319 1.970917 CTGTTTCGCTCATCACGCCC 61.971 60.000 0.00 0.00 0.00 6.13
1178 1320 2.435938 TTTCGCTCATCACGCCCC 60.436 61.111 0.00 0.00 0.00 5.80
1179 1321 2.954684 TTTCGCTCATCACGCCCCT 61.955 57.895 0.00 0.00 0.00 4.79
1180 1322 2.463589 TTTCGCTCATCACGCCCCTT 62.464 55.000 0.00 0.00 0.00 3.95
1181 1323 2.852495 TTCGCTCATCACGCCCCTTC 62.852 60.000 0.00 0.00 0.00 3.46
1182 1324 2.514824 GCTCATCACGCCCCTTCC 60.515 66.667 0.00 0.00 0.00 3.46
1207 1354 1.609783 GGTCAGCCAGCCAGGTAAT 59.390 57.895 0.00 0.00 40.61 1.89
1214 1361 0.179034 CCAGCCAGGTAATCTCAGCC 60.179 60.000 0.00 0.00 0.00 4.85
1218 1365 1.340017 GCCAGGTAATCTCAGCCACAA 60.340 52.381 0.00 0.00 0.00 3.33
1221 1368 3.826157 CCAGGTAATCTCAGCCACAAAAA 59.174 43.478 0.00 0.00 0.00 1.94
1223 1370 5.393461 CCAGGTAATCTCAGCCACAAAAATC 60.393 44.000 0.00 0.00 0.00 2.17
1275 1473 7.610305 GGAGGATTTCTCAGGTACAACAATTTA 59.390 37.037 0.00 0.00 44.19 1.40
1291 1489 8.365647 ACAACAATTTATATACTACTCCCTCCG 58.634 37.037 0.00 0.00 0.00 4.63
1292 1490 8.365647 CAACAATTTATATACTACTCCCTCCGT 58.634 37.037 0.00 0.00 0.00 4.69
1293 1491 8.488308 ACAATTTATATACTACTCCCTCCGTT 57.512 34.615 0.00 0.00 0.00 4.44
1294 1492 8.583296 ACAATTTATATACTACTCCCTCCGTTC 58.417 37.037 0.00 0.00 0.00 3.95
1295 1493 7.715266 ATTTATATACTACTCCCTCCGTTCC 57.285 40.000 0.00 0.00 0.00 3.62
1296 1494 2.378378 ATACTACTCCCTCCGTTCCC 57.622 55.000 0.00 0.00 0.00 3.97
1297 1495 1.002069 TACTACTCCCTCCGTTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
1298 1496 0.115745 ACTACTCCCTCCGTTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
1299 1497 1.272807 CTACTCCCTCCGTTCCCAAA 58.727 55.000 0.00 0.00 0.00 3.28
1300 1498 1.838077 CTACTCCCTCCGTTCCCAAAT 59.162 52.381 0.00 0.00 0.00 2.32
1301 1499 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
1302 1500 1.558294 ACTCCCTCCGTTCCCAAATAC 59.442 52.381 0.00 0.00 0.00 1.89
1303 1501 1.838077 CTCCCTCCGTTCCCAAATACT 59.162 52.381 0.00 0.00 0.00 2.12
1304 1502 2.238898 CTCCCTCCGTTCCCAAATACTT 59.761 50.000 0.00 0.00 0.00 2.24
1305 1503 2.026636 TCCCTCCGTTCCCAAATACTTG 60.027 50.000 0.00 0.00 0.00 3.16
1306 1504 2.290705 CCCTCCGTTCCCAAATACTTGT 60.291 50.000 0.00 0.00 0.00 3.16
1307 1505 3.007635 CCTCCGTTCCCAAATACTTGTC 58.992 50.000 0.00 0.00 0.00 3.18
1308 1506 3.307480 CCTCCGTTCCCAAATACTTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
1309 1507 4.324267 CTCCGTTCCCAAATACTTGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
1310 1508 4.721132 TCCGTTCCCAAATACTTGTCTTT 58.279 39.130 0.00 0.00 0.00 2.52
1311 1509 4.758165 TCCGTTCCCAAATACTTGTCTTTC 59.242 41.667 0.00 0.00 0.00 2.62
1312 1510 4.760204 CCGTTCCCAAATACTTGTCTTTCT 59.240 41.667 0.00 0.00 0.00 2.52
1313 1511 5.935789 CCGTTCCCAAATACTTGTCTTTCTA 59.064 40.000 0.00 0.00 0.00 2.10
1314 1512 6.092259 CCGTTCCCAAATACTTGTCTTTCTAG 59.908 42.308 0.00 0.00 0.00 2.43
1315 1513 6.092259 CGTTCCCAAATACTTGTCTTTCTAGG 59.908 42.308 0.00 0.00 0.00 3.02
1316 1514 5.497474 TCCCAAATACTTGTCTTTCTAGGC 58.503 41.667 0.00 0.00 0.00 3.93
1317 1515 5.013704 TCCCAAATACTTGTCTTTCTAGGCA 59.986 40.000 0.00 0.00 33.22 4.75
1318 1516 5.888161 CCCAAATACTTGTCTTTCTAGGCAT 59.112 40.000 0.00 0.00 35.56 4.40
1319 1517 6.378280 CCCAAATACTTGTCTTTCTAGGCATT 59.622 38.462 0.00 0.00 35.56 3.56
1320 1518 7.093771 CCCAAATACTTGTCTTTCTAGGCATTT 60.094 37.037 0.00 0.00 35.56 2.32
1321 1519 7.970614 CCAAATACTTGTCTTTCTAGGCATTTC 59.029 37.037 0.00 0.00 35.56 2.17
1322 1520 8.514594 CAAATACTTGTCTTTCTAGGCATTTCA 58.485 33.333 0.00 0.00 35.56 2.69
1323 1521 8.635765 AATACTTGTCTTTCTAGGCATTTCAA 57.364 30.769 0.00 0.00 35.56 2.69
1324 1522 6.959639 ACTTGTCTTTCTAGGCATTTCAAA 57.040 33.333 0.00 0.00 35.56 2.69
1325 1523 7.530426 ACTTGTCTTTCTAGGCATTTCAAAT 57.470 32.000 0.00 0.00 35.56 2.32
1326 1524 8.635765 ACTTGTCTTTCTAGGCATTTCAAATA 57.364 30.769 0.00 0.00 35.56 1.40
1327 1525 8.734386 ACTTGTCTTTCTAGGCATTTCAAATAG 58.266 33.333 0.00 0.00 35.56 1.73
1328 1526 8.862325 TTGTCTTTCTAGGCATTTCAAATAGA 57.138 30.769 0.00 0.00 35.56 1.98
1329 1527 8.268850 TGTCTTTCTAGGCATTTCAAATAGAC 57.731 34.615 0.00 0.00 29.10 2.59
1330 1528 8.103305 TGTCTTTCTAGGCATTTCAAATAGACT 58.897 33.333 0.00 1.60 29.10 3.24
1331 1529 8.608317 GTCTTTCTAGGCATTTCAAATAGACTC 58.392 37.037 0.00 0.00 0.00 3.36
1332 1530 8.321353 TCTTTCTAGGCATTTCAAATAGACTCA 58.679 33.333 0.00 0.00 0.00 3.41
1333 1531 8.862325 TTTCTAGGCATTTCAAATAGACTCAA 57.138 30.769 0.00 0.00 0.00 3.02
1334 1532 7.849804 TCTAGGCATTTCAAATAGACTCAAC 57.150 36.000 0.00 0.00 0.00 3.18
1335 1533 7.394016 TCTAGGCATTTCAAATAGACTCAACA 58.606 34.615 0.00 0.00 0.00 3.33
1336 1534 8.049117 TCTAGGCATTTCAAATAGACTCAACAT 58.951 33.333 0.00 0.00 0.00 2.71
1337 1535 9.330063 CTAGGCATTTCAAATAGACTCAACATA 57.670 33.333 0.00 0.00 0.00 2.29
1338 1536 7.989826 AGGCATTTCAAATAGACTCAACATAC 58.010 34.615 0.00 0.00 0.00 2.39
1339 1537 6.907212 GGCATTTCAAATAGACTCAACATACG 59.093 38.462 0.00 0.00 0.00 3.06
1340 1538 7.201609 GGCATTTCAAATAGACTCAACATACGA 60.202 37.037 0.00 0.00 0.00 3.43
1341 1539 8.175069 GCATTTCAAATAGACTCAACATACGAA 58.825 33.333 0.00 0.00 0.00 3.85
1345 1543 9.863845 TTCAAATAGACTCAACATACGAATGTA 57.136 29.630 0.00 0.00 45.79 2.29
1393 1591 9.985730 TTAGAAAGACAAGTATTTAAGAACGGA 57.014 29.630 0.00 0.00 0.00 4.69
1394 1592 8.535690 AGAAAGACAAGTATTTAAGAACGGAG 57.464 34.615 0.00 0.00 0.00 4.63
1395 1593 7.603024 AGAAAGACAAGTATTTAAGAACGGAGG 59.397 37.037 0.00 0.00 0.00 4.30
1396 1594 5.731591 AGACAAGTATTTAAGAACGGAGGG 58.268 41.667 0.00 0.00 0.00 4.30
1399 1597 5.247792 ACAAGTATTTAAGAACGGAGGGAGT 59.752 40.000 0.00 0.00 0.00 3.85
1403 1601 6.666980 AGTATTTAAGAACGGAGGGAGTACTT 59.333 38.462 0.00 0.00 0.00 2.24
1404 1602 5.397142 TTTAAGAACGGAGGGAGTACTTC 57.603 43.478 0.00 0.00 0.00 3.01
1430 1628 5.437191 AAGTCGACAGAATCCCCTTTATT 57.563 39.130 19.50 0.00 0.00 1.40
1431 1629 6.555463 AAGTCGACAGAATCCCCTTTATTA 57.445 37.500 19.50 0.00 0.00 0.98
1432 1630 6.749036 AGTCGACAGAATCCCCTTTATTAT 57.251 37.500 19.50 0.00 0.00 1.28
1454 1652 6.727824 ATCAAAAGAAGTATGACCGTCTTG 57.272 37.500 0.00 0.00 30.85 3.02
1474 1672 2.289565 GAAGCGCTACTTGGCCTAATT 58.710 47.619 12.05 0.00 39.29 1.40
1526 1725 9.298774 GACGAATGTTAGCAGTAAATTACTACT 57.701 33.333 10.41 10.41 37.23 2.57
1528 1727 8.753175 CGAATGTTAGCAGTAAATTACTACTCC 58.247 37.037 9.02 3.38 37.23 3.85
1529 1728 8.959705 AATGTTAGCAGTAAATTACTACTCCC 57.040 34.615 9.02 3.07 37.23 4.30
1530 1729 7.729124 TGTTAGCAGTAAATTACTACTCCCT 57.271 36.000 9.02 2.98 37.23 4.20
1531 1730 7.779073 TGTTAGCAGTAAATTACTACTCCCTC 58.221 38.462 9.02 1.31 37.23 4.30
1532 1731 5.873146 AGCAGTAAATTACTACTCCCTCC 57.127 43.478 5.23 0.00 37.23 4.30
1533 1732 4.341520 AGCAGTAAATTACTACTCCCTCCG 59.658 45.833 5.23 0.00 37.23 4.63
1534 1733 4.099113 GCAGTAAATTACTACTCCCTCCGT 59.901 45.833 5.23 0.00 37.23 4.69
1535 1734 5.394993 GCAGTAAATTACTACTCCCTCCGTT 60.395 44.000 5.23 0.00 37.23 4.44
1536 1735 6.271566 CAGTAAATTACTACTCCCTCCGTTC 58.728 44.000 5.23 0.00 37.23 3.95
1537 1736 4.750021 AAATTACTACTCCCTCCGTTCC 57.250 45.455 0.00 0.00 0.00 3.62
1538 1737 3.684408 ATTACTACTCCCTCCGTTCCT 57.316 47.619 0.00 0.00 0.00 3.36
1539 1738 4.803329 ATTACTACTCCCTCCGTTCCTA 57.197 45.455 0.00 0.00 0.00 2.94
1540 1739 4.591321 TTACTACTCCCTCCGTTCCTAA 57.409 45.455 0.00 0.00 0.00 2.69
1541 1740 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
1542 1741 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
1543 1742 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
1544 1743 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
1545 1744 6.141790 ACTACTCCCTCCGTTCCTAAATATT 58.858 40.000 0.00 0.00 0.00 1.28
1546 1745 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
1547 1746 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
1548 1747 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
1549 1748 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
1550 1749 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
1551 1750 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
1552 1751 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
1553 1752 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
1554 1753 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
1555 1754 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
1556 1755 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
1557 1756 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
1570 1769 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
1571 1770 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
1572 1771 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
1573 1772 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
1574 1773 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
1575 1774 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
1576 1775 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
1577 1776 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
1578 1777 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
1580 1779 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
1581 1780 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
1582 1781 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
1583 1782 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
1584 1783 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
1585 1784 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
1586 1785 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
1587 1786 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
1588 1787 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
1589 1788 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
1590 1789 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
1591 1790 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
1592 1791 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
1593 1792 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
1594 1793 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
1595 1794 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
1596 1795 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
1597 1796 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
1598 1797 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
1599 1798 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
1600 1799 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
1601 1800 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
1602 1801 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
1603 1802 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
1604 1803 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
1642 1841 4.944048 CATACATCCGTATGTTGAGTCCA 58.056 43.478 0.00 0.00 46.70 4.02
1643 1842 5.541845 CATACATCCGTATGTTGAGTCCAT 58.458 41.667 0.00 0.00 46.70 3.41
1644 1843 4.487714 ACATCCGTATGTTGAGTCCATT 57.512 40.909 0.00 0.00 44.07 3.16
1645 1844 4.843728 ACATCCGTATGTTGAGTCCATTT 58.156 39.130 0.00 0.00 44.07 2.32
1646 1845 4.635765 ACATCCGTATGTTGAGTCCATTTG 59.364 41.667 0.00 0.00 44.07 2.32
1647 1846 4.545208 TCCGTATGTTGAGTCCATTTGA 57.455 40.909 0.00 0.00 0.00 2.69
1648 1847 4.900684 TCCGTATGTTGAGTCCATTTGAA 58.099 39.130 0.00 0.00 0.00 2.69
1649 1848 5.309638 TCCGTATGTTGAGTCCATTTGAAA 58.690 37.500 0.00 0.00 0.00 2.69
1650 1849 5.943416 TCCGTATGTTGAGTCCATTTGAAAT 59.057 36.000 0.00 0.00 0.00 2.17
1651 1850 6.029607 CCGTATGTTGAGTCCATTTGAAATG 58.970 40.000 10.84 10.84 0.00 2.32
1652 1851 5.512788 CGTATGTTGAGTCCATTTGAAATGC 59.487 40.000 12.26 0.23 0.00 3.56
1653 1852 4.255833 TGTTGAGTCCATTTGAAATGCC 57.744 40.909 12.26 5.23 0.00 4.40
1654 1853 3.896888 TGTTGAGTCCATTTGAAATGCCT 59.103 39.130 12.26 9.70 0.00 4.75
1655 1854 5.076182 TGTTGAGTCCATTTGAAATGCCTA 58.924 37.500 12.26 0.00 0.00 3.93
1656 1855 5.183713 TGTTGAGTCCATTTGAAATGCCTAG 59.816 40.000 12.26 0.00 0.00 3.02
1657 1856 5.178096 TGAGTCCATTTGAAATGCCTAGA 57.822 39.130 12.26 1.83 0.00 2.43
1658 1857 5.569355 TGAGTCCATTTGAAATGCCTAGAA 58.431 37.500 12.26 0.00 0.00 2.10
1659 1858 6.009589 TGAGTCCATTTGAAATGCCTAGAAA 58.990 36.000 12.26 0.00 0.00 2.52
1660 1859 6.151648 TGAGTCCATTTGAAATGCCTAGAAAG 59.848 38.462 12.26 0.00 0.00 2.62
1661 1860 6.248433 AGTCCATTTGAAATGCCTAGAAAGA 58.752 36.000 12.26 0.00 0.00 2.52
1662 1861 6.151817 AGTCCATTTGAAATGCCTAGAAAGAC 59.848 38.462 12.26 10.86 0.00 3.01
1663 1862 6.009589 TCCATTTGAAATGCCTAGAAAGACA 58.990 36.000 12.26 0.00 0.00 3.41
1664 1863 6.493115 TCCATTTGAAATGCCTAGAAAGACAA 59.507 34.615 12.26 0.00 0.00 3.18
1665 1864 7.015098 TCCATTTGAAATGCCTAGAAAGACAAA 59.985 33.333 12.26 0.00 0.00 2.83
1666 1865 7.820872 CCATTTGAAATGCCTAGAAAGACAAAT 59.179 33.333 12.26 0.00 36.38 2.32
1667 1866 9.859427 CATTTGAAATGCCTAGAAAGACAAATA 57.141 29.630 4.82 0.00 34.96 1.40
1671 1870 9.859427 TGAAATGCCTAGAAAGACAAATATTTG 57.141 29.630 23.60 23.60 43.62 2.32
1672 1871 9.305925 GAAATGCCTAGAAAGACAAATATTTGG 57.694 33.333 27.43 12.85 42.34 3.28
1673 1872 6.773976 TGCCTAGAAAGACAAATATTTGGG 57.226 37.500 27.43 18.18 42.34 4.12
1674 1873 6.489603 TGCCTAGAAAGACAAATATTTGGGA 58.510 36.000 27.43 8.88 42.34 4.37
1675 1874 6.951198 TGCCTAGAAAGACAAATATTTGGGAA 59.049 34.615 27.43 11.57 42.34 3.97
1676 1875 7.093945 TGCCTAGAAAGACAAATATTTGGGAAC 60.094 37.037 27.43 16.80 42.34 3.62
1677 1876 7.472543 CCTAGAAAGACAAATATTTGGGAACG 58.527 38.462 27.43 6.31 42.34 3.95
1678 1877 6.267496 AGAAAGACAAATATTTGGGAACGG 57.733 37.500 27.43 5.66 42.34 4.44
1679 1878 6.007703 AGAAAGACAAATATTTGGGAACGGA 58.992 36.000 27.43 0.00 42.34 4.69
1680 1879 5.897377 AAGACAAATATTTGGGAACGGAG 57.103 39.130 27.43 4.34 42.34 4.63
1681 1880 4.270008 AGACAAATATTTGGGAACGGAGG 58.730 43.478 27.43 3.68 42.34 4.30
1682 1881 3.361786 ACAAATATTTGGGAACGGAGGG 58.638 45.455 27.43 3.22 42.34 4.30
1794 2027 7.068839 TGTCTGTTTTACCCTGCATTTTTCTAA 59.931 33.333 0.00 0.00 0.00 2.10
1795 2028 8.088365 GTCTGTTTTACCCTGCATTTTTCTAAT 58.912 33.333 0.00 0.00 0.00 1.73
1854 2087 3.184382 TGTCTCTCTGGGTATCCAACA 57.816 47.619 0.00 0.00 43.51 3.33
1963 2221 2.666895 CGCTATGCATCTACTCCACTCG 60.667 54.545 0.19 0.00 0.00 4.18
1964 2222 2.554462 GCTATGCATCTACTCCACTCGA 59.446 50.000 0.19 0.00 0.00 4.04
1987 2245 0.943835 AAATTTTGTCTTGGCGCGCC 60.944 50.000 42.35 42.35 0.00 6.53
2049 2307 2.514824 GGATTCAGCTGGTCCGGC 60.515 66.667 15.51 15.51 35.73 6.13
2118 2376 3.485431 CCTCTTGCAGCACGCTCG 61.485 66.667 0.00 0.00 43.06 5.03
2125 2383 3.108289 CAGCACGCTCGTCAGTGG 61.108 66.667 8.42 0.00 38.68 4.00
2167 2425 7.502895 ACTGACTCGTATTCAGGTACATATTCT 59.497 37.037 12.93 0.00 44.19 2.40
2169 2427 8.781196 TGACTCGTATTCAGGTACATATTCTAC 58.219 37.037 0.00 0.00 0.00 2.59
2174 2432 8.237949 CGTATTCAGGTACATATTCTACCTCAG 58.762 40.741 6.04 0.00 41.88 3.35
2206 2464 4.943705 ACTTTGATCCATAATCGCACTGTT 59.056 37.500 0.00 0.00 37.17 3.16
2228 2493 3.074412 CGGCACTCCTTTTGTTCACTAT 58.926 45.455 0.00 0.00 0.00 2.12
2298 2563 5.809051 TCGTGACTTGATTGATGATCTTCTG 59.191 40.000 9.75 0.00 35.69 3.02
2369 2634 0.321653 GTGATGGGTTGGTCGAAGCT 60.322 55.000 0.00 0.00 32.27 3.74
2395 2660 4.330074 CCGTGTCTTCAAGGTGATCAATAC 59.670 45.833 0.00 0.00 38.18 1.89
2414 2679 8.078060 TCAATACTGATTCCTACTGTTGATGA 57.922 34.615 0.00 0.00 0.00 2.92
2418 2683 7.621428 ACTGATTCCTACTGTTGATGATTTG 57.379 36.000 0.00 0.00 0.00 2.32
2441 2707 4.431416 TCCTTGTTGGAAGACTGCTTTA 57.569 40.909 0.00 0.00 42.94 1.85
2442 2708 4.787551 TCCTTGTTGGAAGACTGCTTTAA 58.212 39.130 0.00 0.00 42.94 1.52
2451 2717 7.034685 TGGAAGACTGCTTTAAAAGGTAAAC 57.965 36.000 0.00 0.00 33.61 2.01
2453 2719 7.286775 TGGAAGACTGCTTTAAAAGGTAAACAT 59.713 33.333 0.00 0.00 33.61 2.71
2565 2836 5.221244 GCCCTTCAACTGACAAAAACATACT 60.221 40.000 0.00 0.00 0.00 2.12
2622 2895 9.240742 CACGTGTAAATTTGTAAACACAAAAAC 57.759 29.630 17.68 6.83 42.04 2.43
2682 2956 1.362224 ATGTGGCACTACTCAGGGTT 58.638 50.000 19.83 0.00 0.00 4.11
2700 2974 7.103641 TCAGGGTTCTGAATTTGTATGTACTC 58.896 38.462 0.00 0.00 46.08 2.59
2701 2975 6.316390 CAGGGTTCTGAATTTGTATGTACTCC 59.684 42.308 0.00 0.00 43.49 3.85
2702 2976 5.589050 GGGTTCTGAATTTGTATGTACTCCC 59.411 44.000 0.00 0.00 0.00 4.30
2703 2977 6.415573 GGTTCTGAATTTGTATGTACTCCCT 58.584 40.000 0.00 0.00 0.00 4.20
2704 2978 6.539103 GGTTCTGAATTTGTATGTACTCCCTC 59.461 42.308 0.00 0.00 0.00 4.30
2705 2979 6.235231 TCTGAATTTGTATGTACTCCCTCC 57.765 41.667 0.00 0.00 0.00 4.30
2706 2980 5.018539 TGAATTTGTATGTACTCCCTCCG 57.981 43.478 0.00 0.00 0.00 4.63
2707 2981 4.468510 TGAATTTGTATGTACTCCCTCCGT 59.531 41.667 0.00 0.00 0.00 4.69
2708 2982 5.657745 TGAATTTGTATGTACTCCCTCCGTA 59.342 40.000 0.00 0.00 0.00 4.02
2709 2983 6.154877 TGAATTTGTATGTACTCCCTCCGTAA 59.845 38.462 0.00 0.00 0.00 3.18
2710 2984 5.999205 TTTGTATGTACTCCCTCCGTAAA 57.001 39.130 0.00 0.00 0.00 2.01
2711 2985 5.587388 TTGTATGTACTCCCTCCGTAAAG 57.413 43.478 0.00 0.00 0.00 1.85
2712 2986 4.858850 TGTATGTACTCCCTCCGTAAAGA 58.141 43.478 0.00 0.00 0.00 2.52
2713 2987 5.263599 TGTATGTACTCCCTCCGTAAAGAA 58.736 41.667 0.00 0.00 0.00 2.52
2714 2988 5.716228 TGTATGTACTCCCTCCGTAAAGAAA 59.284 40.000 0.00 0.00 0.00 2.52
2716 2990 7.560991 TGTATGTACTCCCTCCGTAAAGAAATA 59.439 37.037 0.00 0.00 0.00 1.40
2717 2991 7.613551 ATGTACTCCCTCCGTAAAGAAATAT 57.386 36.000 0.00 0.00 0.00 1.28
2718 2992 8.716674 ATGTACTCCCTCCGTAAAGAAATATA 57.283 34.615 0.00 0.00 0.00 0.86
2719 2993 8.537728 TGTACTCCCTCCGTAAAGAAATATAA 57.462 34.615 0.00 0.00 0.00 0.98
2720 2994 8.980596 TGTACTCCCTCCGTAAAGAAATATAAA 58.019 33.333 0.00 0.00 0.00 1.40
2721 2995 9.822185 GTACTCCCTCCGTAAAGAAATATAAAA 57.178 33.333 0.00 0.00 0.00 1.52
2722 2996 8.959705 ACTCCCTCCGTAAAGAAATATAAAAG 57.040 34.615 0.00 0.00 0.00 2.27
2723 2997 7.498239 ACTCCCTCCGTAAAGAAATATAAAAGC 59.502 37.037 0.00 0.00 0.00 3.51
2724 2998 6.480981 TCCCTCCGTAAAGAAATATAAAAGCG 59.519 38.462 0.00 0.00 0.00 4.68
2727 3001 8.179615 CCTCCGTAAAGAAATATAAAAGCGTTT 58.820 33.333 2.53 2.53 0.00 3.60
2743 3017 8.828688 AAAAGCGTTTAGATCACTACTTTAGT 57.171 30.769 0.00 0.00 40.28 2.24
2776 3050 9.765795 AACGATCTTATATTTCTTTACAGAGGG 57.234 33.333 0.00 0.00 0.00 4.30
2777 3051 9.144298 ACGATCTTATATTTCTTTACAGAGGGA 57.856 33.333 0.00 0.00 0.00 4.20
2778 3052 9.413048 CGATCTTATATTTCTTTACAGAGGGAC 57.587 37.037 0.00 0.00 0.00 4.46
2791 3065 5.194473 ACAGAGGGACTACATTACAGAGA 57.806 43.478 0.00 0.00 41.55 3.10
2848 3122 6.269315 AGCAAGTCACTAGTGATATCTTTCG 58.731 40.000 27.54 15.38 42.18 3.46
2888 3174 7.715657 TGTCTCAGTTTTGAAAGCATGTTTAT 58.284 30.769 0.00 0.00 31.69 1.40
2892 3178 9.252962 CTCAGTTTTGAAAGCATGTTTATCTTT 57.747 29.630 0.00 0.00 31.69 2.52
3021 3322 2.743664 TCTTTGCTTGGATCATGTGTCG 59.256 45.455 0.00 0.00 0.00 4.35
3330 3638 2.227865 TCTTGCTTTTGTAACATCGGGC 59.772 45.455 0.00 0.00 0.00 6.13
3460 3768 5.410355 AATGGTCCAACATCCAAATTGAG 57.590 39.130 0.00 0.00 37.27 3.02
3586 3894 8.624776 GTCTTATAAGCTTGCTATTGTTGGAAT 58.375 33.333 9.86 0.00 0.00 3.01
3683 3991 3.306919 GGGCATGGATTTGTGTTTCACAT 60.307 43.478 3.43 0.00 44.16 3.21
3702 4010 9.990360 TTTCACATGACTACAATGAAGTAACTA 57.010 29.630 0.00 0.00 36.91 2.24
4278 4586 7.934665 TCCTTTACTGTGCTTTGTATACTGAAA 59.065 33.333 4.17 0.00 0.00 2.69
4354 4662 0.610232 ATGGAGCAACAAGGTCAGCC 60.610 55.000 0.00 0.00 46.51 4.85
4358 4666 0.536006 AGCAACAAGGTCAGCCACTC 60.536 55.000 0.00 0.00 37.19 3.51
4509 4817 4.155826 CACAGGACGAATGCTTTATTGGAA 59.844 41.667 0.00 0.00 0.00 3.53
4724 5035 6.705381 CCCTGAATTACTCAATTGTGCAAAAA 59.295 34.615 5.13 0.00 34.44 1.94
4871 5184 0.689055 ATGCTCTGCACAGTCTTCCA 59.311 50.000 0.00 0.00 43.04 3.53
4892 5205 1.305219 CGGCGATGACCCAATTGTGT 61.305 55.000 0.00 0.00 0.00 3.72
5574 5893 4.937201 AAGGGAGTGGAAAATGTTGTTC 57.063 40.909 0.00 0.00 0.00 3.18
5621 5940 4.406648 TGAGATTCATAACGGTGATGCT 57.593 40.909 0.17 0.00 0.00 3.79
5826 6148 0.394899 GGATTGTGAAGGCCTGGAGG 60.395 60.000 5.69 0.00 38.53 4.30
6101 6433 5.106791 TGCACATTTTGTTTTGTGTCTTTGG 60.107 36.000 5.11 0.00 44.01 3.28
6160 6492 7.072177 TCTTATAACACAATTTTCTGCCTCG 57.928 36.000 0.00 0.00 0.00 4.63
6195 6527 9.087424 GATAGCTGCATAAATCGTACATATTGA 57.913 33.333 1.02 0.00 0.00 2.57
6265 6602 6.094048 GCAGATGTCCAAATGAGCTTTAGTAA 59.906 38.462 0.00 0.00 0.00 2.24
6395 7080 8.576442 ACTGTTTGTTCCCTAATTCAAACTATG 58.424 33.333 15.20 9.99 45.27 2.23
6457 7148 0.248866 ACTTTGACGGGCAAAAAGCG 60.249 50.000 10.70 1.12 45.26 4.68
6513 7231 5.420725 TGTGCAAGTACCTTGATCTGTAT 57.579 39.130 8.11 0.00 43.42 2.29
6517 7235 5.874810 TGCAAGTACCTTGATCTGTATCAAC 59.125 40.000 8.11 0.00 45.17 3.18
6522 7240 3.846588 ACCTTGATCTGTATCAACCTGGT 59.153 43.478 0.00 0.00 45.17 4.00
6523 7241 4.194640 CCTTGATCTGTATCAACCTGGTG 58.805 47.826 0.00 0.00 45.17 4.17
6525 7243 5.491070 CTTGATCTGTATCAACCTGGTGAA 58.509 41.667 0.00 0.00 45.17 3.18
6527 7245 4.080919 TGATCTGTATCAACCTGGTGAAGG 60.081 45.833 0.00 0.00 43.60 3.46
6528 7246 4.162320 GATCTGTATCAACCTGGTGAAGGA 59.838 45.833 0.00 0.00 39.07 3.36
6529 7247 5.338381 GATCTGTATCAACCTGGTGAAGGAA 60.338 44.000 0.00 0.00 39.07 3.36
6530 7248 7.128120 GATCTGTATCAACCTGGTGAAGGAAG 61.128 46.154 0.00 0.00 39.07 3.46
6531 7249 9.420682 GATCTGTATCAACCTGGTGAAGGAAGT 62.421 44.444 0.00 0.00 39.07 3.01
6570 7288 2.433664 GCAAGTGCCCTGCAATGC 60.434 61.111 0.00 0.00 42.91 3.56
6589 7308 5.895636 ATGCATCGAATTTGGTCTTGTAA 57.104 34.783 0.00 0.00 0.00 2.41
6625 7346 1.644509 TGAGCCAGAGACCTTTGCTA 58.355 50.000 0.00 0.00 30.55 3.49
6668 7392 2.373540 TCGTTCTTTGGATGTACCCG 57.626 50.000 0.00 0.00 38.00 5.28
6688 7412 5.163864 ACCCGACCGATTTCGTTTTATTTAC 60.164 40.000 0.00 0.00 37.29 2.01
6689 7413 5.257864 CCGACCGATTTCGTTTTATTTACC 58.742 41.667 0.00 0.00 37.29 2.85
6720 7444 3.197664 GCCAGAGGCCTTTGCTATT 57.802 52.632 17.88 0.00 44.06 1.73
6738 7462 9.679661 TTTGCTATTCTGAACCTGTATTGAATA 57.320 29.630 0.00 0.00 0.00 1.75
6775 7500 5.957798 TCACTTTGGCATGATTGAATTCTC 58.042 37.500 7.05 0.00 0.00 2.87
6791 7523 6.871844 TGAATTCTCTGAGTAGAAGTGATGG 58.128 40.000 7.05 0.00 38.81 3.51
6796 7528 5.047021 TCTCTGAGTAGAAGTGATGGGTTTG 60.047 44.000 4.32 0.00 31.21 2.93
6823 7555 4.082845 TGTTTGTTTCTGAACTTGGGTCA 58.917 39.130 0.00 0.00 36.70 4.02
6834 7566 6.430925 TCTGAACTTGGGTCAGATTGTAAATG 59.569 38.462 10.74 0.00 35.81 2.32
6996 7765 2.797156 CGGAAATGCGGAAGATGACTAG 59.203 50.000 0.00 0.00 0.00 2.57
7076 7849 1.584380 GGGCAAGCTCTGTTCTGCAG 61.584 60.000 7.63 7.63 46.34 4.41
7089 7862 0.694771 TCTGCAGCTGTTCTTGGGAT 59.305 50.000 16.64 0.00 0.00 3.85
7166 7947 7.453752 TCTTGTGTAGTACTCCCTCTGTAAAAT 59.546 37.037 0.00 0.00 0.00 1.82
7169 7950 9.263446 TGTGTAGTACTCCCTCTGTAAAATAAT 57.737 33.333 0.00 0.00 0.00 1.28
7399 8181 7.229306 TGTGATCTACTGTTTGAGCATTTTTCT 59.771 33.333 5.13 0.00 31.20 2.52
7568 8358 3.764237 TGAAACGGAAAACTAGAGCCT 57.236 42.857 0.00 0.00 0.00 4.58
7572 8362 0.744771 CGGAAAACTAGAGCCTGGGC 60.745 60.000 3.00 3.00 42.33 5.36
7609 8399 0.463204 CCTCAGGCTCATGTCATCGT 59.537 55.000 0.00 0.00 0.00 3.73
7612 8402 0.463204 CAGGCTCATGTCATCGTCCT 59.537 55.000 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
69 72 1.463056 CGCGTCACCTATTTTGAAGCA 59.537 47.619 0.00 0.00 45.44 3.91
101 104 8.202137 TCTCTCCGTCCCAAAATAAGTAAATAG 58.798 37.037 0.00 0.00 0.00 1.73
102 105 8.081517 TCTCTCCGTCCCAAAATAAGTAAATA 57.918 34.615 0.00 0.00 0.00 1.40
106 109 6.555463 ATTCTCTCCGTCCCAAAATAAGTA 57.445 37.500 0.00 0.00 0.00 2.24
455 465 9.154847 TGTACTTTACAAGATGTTCATCATGAG 57.845 33.333 19.94 11.86 34.64 2.90
513 524 9.912634 AAAGATGTCCACTTATGTACATTTTTG 57.087 29.630 14.77 8.29 36.13 2.44
531 542 9.722056 ATAATCGCAAACAGAATAAAAGATGTC 57.278 29.630 0.00 0.00 0.00 3.06
546 558 6.103222 ACGTAGGAAAAGATAATCGCAAAC 57.897 37.500 0.00 0.00 0.00 2.93
644 666 6.312487 TCAAAAATGTTCGTCGTGTGTTTTA 58.688 32.000 0.00 0.00 0.00 1.52
647 669 4.343811 TCAAAAATGTTCGTCGTGTGTT 57.656 36.364 0.00 0.00 0.00 3.32
648 670 4.343811 TTCAAAAATGTTCGTCGTGTGT 57.656 36.364 0.00 0.00 0.00 3.72
649 671 5.672653 TTTTCAAAAATGTTCGTCGTGTG 57.327 34.783 0.00 0.00 0.00 3.82
650 672 5.629849 TGTTTTTCAAAAATGTTCGTCGTGT 59.370 32.000 0.00 0.00 0.00 4.49
653 675 6.917059 TCATGTTTTTCAAAAATGTTCGTCG 58.083 32.000 0.00 0.00 0.00 5.12
1055 1197 1.523484 TGTTGAGCTTGAGCACGCA 60.523 52.632 5.70 0.27 45.16 5.24
1056 1198 1.082496 GTGTTGAGCTTGAGCACGC 60.082 57.895 5.70 0.00 45.16 5.34
1057 1199 0.234106 CAGTGTTGAGCTTGAGCACG 59.766 55.000 5.70 0.00 45.16 5.34
1059 1201 0.535780 CCCAGTGTTGAGCTTGAGCA 60.536 55.000 5.70 0.00 45.16 4.26
1060 1202 1.239968 CCCCAGTGTTGAGCTTGAGC 61.240 60.000 0.00 0.00 42.49 4.26
1061 1203 1.239968 GCCCCAGTGTTGAGCTTGAG 61.240 60.000 0.00 0.00 0.00 3.02
1062 1204 1.228245 GCCCCAGTGTTGAGCTTGA 60.228 57.895 0.00 0.00 0.00 3.02
1063 1205 1.521450 CTGCCCCAGTGTTGAGCTTG 61.521 60.000 0.00 0.00 0.00 4.01
1064 1206 1.228367 CTGCCCCAGTGTTGAGCTT 60.228 57.895 0.00 0.00 0.00 3.74
1065 1207 2.433446 CTGCCCCAGTGTTGAGCT 59.567 61.111 0.00 0.00 0.00 4.09
1067 1209 1.302832 GACCTGCCCCAGTGTTGAG 60.303 63.158 0.00 0.00 0.00 3.02
1068 1210 2.055689 CTGACCTGCCCCAGTGTTGA 62.056 60.000 0.00 0.00 0.00 3.18
1069 1211 1.601759 CTGACCTGCCCCAGTGTTG 60.602 63.158 0.00 0.00 0.00 3.33
1070 1212 2.078665 ACTGACCTGCCCCAGTGTT 61.079 57.895 0.00 0.00 41.59 3.32
1073 1215 3.252284 CCACTGACCTGCCCCAGT 61.252 66.667 0.00 0.00 43.73 4.00
1074 1216 4.729918 GCCACTGACCTGCCCCAG 62.730 72.222 0.00 0.00 36.53 4.45
1104 1246 4.742201 CAGCAGGGGTGTCGACGG 62.742 72.222 11.62 0.00 0.00 4.79
1126 1268 2.097160 CAGCACGACAGCGATTGC 59.903 61.111 0.00 0.00 39.11 3.56
1127 1269 1.417592 GACAGCACGACAGCGATTG 59.582 57.895 0.00 0.00 41.64 2.67
1128 1270 2.088763 CGACAGCACGACAGCGATT 61.089 57.895 0.00 0.00 41.64 3.34
1129 1271 2.504899 CGACAGCACGACAGCGAT 60.505 61.111 0.00 0.00 41.64 4.58
1142 1284 4.704103 AGAGAGGGCTGGGCGACA 62.704 66.667 0.00 0.00 0.00 4.35
1143 1285 4.154347 CAGAGAGGGCTGGGCGAC 62.154 72.222 0.00 0.00 32.26 5.19
1144 1286 4.704103 ACAGAGAGGGCTGGGCGA 62.704 66.667 0.00 0.00 40.20 5.54
1145 1287 3.259633 AAACAGAGAGGGCTGGGCG 62.260 63.158 0.00 0.00 40.20 6.13
1146 1288 1.377856 GAAACAGAGAGGGCTGGGC 60.378 63.158 0.00 0.00 40.20 5.36
1147 1289 1.078848 CGAAACAGAGAGGGCTGGG 60.079 63.158 0.00 0.00 40.20 4.45
1148 1290 1.743252 GCGAAACAGAGAGGGCTGG 60.743 63.158 0.00 0.00 40.20 4.85
1149 1291 0.739112 GAGCGAAACAGAGAGGGCTG 60.739 60.000 0.00 0.00 41.63 4.85
1150 1292 1.188219 TGAGCGAAACAGAGAGGGCT 61.188 55.000 0.00 0.00 0.00 5.19
1151 1293 0.107945 ATGAGCGAAACAGAGAGGGC 60.108 55.000 0.00 0.00 0.00 5.19
1152 1294 1.205655 TGATGAGCGAAACAGAGAGGG 59.794 52.381 0.00 0.00 0.00 4.30
1153 1295 2.266554 GTGATGAGCGAAACAGAGAGG 58.733 52.381 0.00 0.00 0.00 3.69
1154 1296 1.916651 CGTGATGAGCGAAACAGAGAG 59.083 52.381 0.00 0.00 0.00 3.20
1155 1297 1.982612 CGTGATGAGCGAAACAGAGA 58.017 50.000 0.00 0.00 0.00 3.10
1156 1298 0.368227 GCGTGATGAGCGAAACAGAG 59.632 55.000 0.00 0.00 0.00 3.35
1157 1299 1.014044 GGCGTGATGAGCGAAACAGA 61.014 55.000 0.00 0.00 35.00 3.41
1158 1300 1.421485 GGCGTGATGAGCGAAACAG 59.579 57.895 0.00 0.00 35.00 3.16
1159 1301 2.032634 GGGCGTGATGAGCGAAACA 61.033 57.895 0.00 0.00 35.00 2.83
1160 1302 2.750888 GGGGCGTGATGAGCGAAAC 61.751 63.158 0.00 0.00 35.00 2.78
1161 1303 2.435938 GGGGCGTGATGAGCGAAA 60.436 61.111 0.00 0.00 35.00 3.46
1162 1304 2.852495 GAAGGGGCGTGATGAGCGAA 62.852 60.000 0.00 0.00 35.00 4.70
1163 1305 3.371097 GAAGGGGCGTGATGAGCGA 62.371 63.158 0.00 0.00 35.00 4.93
1164 1306 2.892425 GAAGGGGCGTGATGAGCG 60.892 66.667 0.00 0.00 35.00 5.03
1165 1307 2.514824 GGAAGGGGCGTGATGAGC 60.515 66.667 0.00 0.00 0.00 4.26
1166 1308 2.190578 GGGAAGGGGCGTGATGAG 59.809 66.667 0.00 0.00 0.00 2.90
1167 1309 3.407967 GGGGAAGGGGCGTGATGA 61.408 66.667 0.00 0.00 0.00 2.92
1168 1310 4.506255 GGGGGAAGGGGCGTGATG 62.506 72.222 0.00 0.00 0.00 3.07
1169 1311 4.760220 AGGGGGAAGGGGCGTGAT 62.760 66.667 0.00 0.00 0.00 3.06
1170 1312 4.995058 AAGGGGGAAGGGGCGTGA 62.995 66.667 0.00 0.00 0.00 4.35
1171 1313 4.740822 CAAGGGGGAAGGGGCGTG 62.741 72.222 0.00 0.00 0.00 5.34
1223 1370 9.507280 CCAGTGCATTATTAGTATTCAACAAAG 57.493 33.333 0.00 0.00 0.00 2.77
1246 1395 3.107601 TGTACCTGAGAAATCCTCCCAG 58.892 50.000 0.00 0.00 41.25 4.45
1275 1473 3.400322 TGGGAACGGAGGGAGTAGTATAT 59.600 47.826 0.00 0.00 0.00 0.86
1282 1480 1.558294 GTATTTGGGAACGGAGGGAGT 59.442 52.381 0.00 0.00 0.00 3.85
1283 1481 1.838077 AGTATTTGGGAACGGAGGGAG 59.162 52.381 0.00 0.00 0.00 4.30
1284 1482 1.961133 AGTATTTGGGAACGGAGGGA 58.039 50.000 0.00 0.00 0.00 4.20
1285 1483 2.290705 ACAAGTATTTGGGAACGGAGGG 60.291 50.000 2.81 0.00 38.66 4.30
1286 1484 3.007635 GACAAGTATTTGGGAACGGAGG 58.992 50.000 2.81 0.00 38.66 4.30
1287 1485 3.939066 AGACAAGTATTTGGGAACGGAG 58.061 45.455 2.81 0.00 38.66 4.63
1288 1486 4.360951 AAGACAAGTATTTGGGAACGGA 57.639 40.909 2.81 0.00 38.66 4.69
1289 1487 4.760204 AGAAAGACAAGTATTTGGGAACGG 59.240 41.667 2.81 0.00 38.66 4.44
1290 1488 5.941948 AGAAAGACAAGTATTTGGGAACG 57.058 39.130 2.81 0.00 38.66 3.95
1291 1489 6.127980 GCCTAGAAAGACAAGTATTTGGGAAC 60.128 42.308 2.81 0.00 38.66 3.62
1292 1490 5.944007 GCCTAGAAAGACAAGTATTTGGGAA 59.056 40.000 2.81 0.00 38.66 3.97
1293 1491 5.013704 TGCCTAGAAAGACAAGTATTTGGGA 59.986 40.000 2.81 0.00 38.66 4.37
1294 1492 5.253330 TGCCTAGAAAGACAAGTATTTGGG 58.747 41.667 2.81 0.00 38.66 4.12
1295 1493 7.396540 AATGCCTAGAAAGACAAGTATTTGG 57.603 36.000 2.81 0.00 38.66 3.28
1296 1494 8.514594 TGAAATGCCTAGAAAGACAAGTATTTG 58.485 33.333 0.00 0.00 40.24 2.32
1297 1495 8.635765 TGAAATGCCTAGAAAGACAAGTATTT 57.364 30.769 0.00 0.00 0.00 1.40
1298 1496 8.635765 TTGAAATGCCTAGAAAGACAAGTATT 57.364 30.769 0.00 0.00 0.00 1.89
1299 1497 8.635765 TTTGAAATGCCTAGAAAGACAAGTAT 57.364 30.769 0.00 0.00 0.00 2.12
1300 1498 8.635765 ATTTGAAATGCCTAGAAAGACAAGTA 57.364 30.769 0.00 0.00 0.00 2.24
1301 1499 6.959639 TTTGAAATGCCTAGAAAGACAAGT 57.040 33.333 0.00 0.00 0.00 3.16
1302 1500 8.950210 TCTATTTGAAATGCCTAGAAAGACAAG 58.050 33.333 0.00 0.00 0.00 3.16
1303 1501 8.730680 GTCTATTTGAAATGCCTAGAAAGACAA 58.269 33.333 0.00 0.00 0.00 3.18
1304 1502 8.103305 AGTCTATTTGAAATGCCTAGAAAGACA 58.897 33.333 12.82 0.00 32.80 3.41
1305 1503 8.499403 AGTCTATTTGAAATGCCTAGAAAGAC 57.501 34.615 0.00 3.26 0.00 3.01
1306 1504 8.321353 TGAGTCTATTTGAAATGCCTAGAAAGA 58.679 33.333 0.00 0.00 0.00 2.52
1307 1505 8.498054 TGAGTCTATTTGAAATGCCTAGAAAG 57.502 34.615 0.00 0.00 0.00 2.62
1308 1506 8.730680 GTTGAGTCTATTTGAAATGCCTAGAAA 58.269 33.333 0.00 0.00 0.00 2.52
1309 1507 7.882791 TGTTGAGTCTATTTGAAATGCCTAGAA 59.117 33.333 0.00 0.00 0.00 2.10
1310 1508 7.394016 TGTTGAGTCTATTTGAAATGCCTAGA 58.606 34.615 0.00 0.00 0.00 2.43
1311 1509 7.615582 TGTTGAGTCTATTTGAAATGCCTAG 57.384 36.000 0.00 0.00 0.00 3.02
1312 1510 9.109393 GTATGTTGAGTCTATTTGAAATGCCTA 57.891 33.333 0.00 0.00 0.00 3.93
1313 1511 7.201644 CGTATGTTGAGTCTATTTGAAATGCCT 60.202 37.037 0.00 0.00 0.00 4.75
1314 1512 6.907212 CGTATGTTGAGTCTATTTGAAATGCC 59.093 38.462 0.00 0.00 0.00 4.40
1315 1513 7.684670 TCGTATGTTGAGTCTATTTGAAATGC 58.315 34.615 0.00 0.00 0.00 3.56
1318 1516 9.214957 ACATTCGTATGTTGAGTCTATTTGAAA 57.785 29.630 1.31 0.00 42.29 2.69
1319 1517 8.771920 ACATTCGTATGTTGAGTCTATTTGAA 57.228 30.769 1.31 0.00 42.29 2.69
1335 1533 9.594478 TCAACAAATGTCTACATACATTCGTAT 57.406 29.630 2.94 0.00 46.72 3.06
1336 1534 8.989653 TCAACAAATGTCTACATACATTCGTA 57.010 30.769 2.94 0.00 46.72 3.43
1337 1535 7.899178 TCAACAAATGTCTACATACATTCGT 57.101 32.000 2.94 0.00 46.72 3.85
1338 1536 9.773328 ATTTCAACAAATGTCTACATACATTCG 57.227 29.630 2.94 0.00 46.72 3.34
1367 1565 9.985730 TCCGTTCTTAAATACTTGTCTTTCTAA 57.014 29.630 0.00 0.00 0.00 2.10
1368 1566 9.635520 CTCCGTTCTTAAATACTTGTCTTTCTA 57.364 33.333 0.00 0.00 0.00 2.10
1369 1567 7.603024 CCTCCGTTCTTAAATACTTGTCTTTCT 59.397 37.037 0.00 0.00 0.00 2.52
1370 1568 7.148457 CCCTCCGTTCTTAAATACTTGTCTTTC 60.148 40.741 0.00 0.00 0.00 2.62
1371 1569 6.653740 CCCTCCGTTCTTAAATACTTGTCTTT 59.346 38.462 0.00 0.00 0.00 2.52
1372 1570 6.013984 TCCCTCCGTTCTTAAATACTTGTCTT 60.014 38.462 0.00 0.00 0.00 3.01
1373 1571 5.482878 TCCCTCCGTTCTTAAATACTTGTCT 59.517 40.000 0.00 0.00 0.00 3.41
1374 1572 5.727434 TCCCTCCGTTCTTAAATACTTGTC 58.273 41.667 0.00 0.00 0.00 3.18
1375 1573 5.247792 ACTCCCTCCGTTCTTAAATACTTGT 59.752 40.000 0.00 0.00 0.00 3.16
1376 1574 5.731591 ACTCCCTCCGTTCTTAAATACTTG 58.268 41.667 0.00 0.00 0.00 3.16
1377 1575 6.666980 AGTACTCCCTCCGTTCTTAAATACTT 59.333 38.462 0.00 0.00 0.00 2.24
1378 1576 6.193504 AGTACTCCCTCCGTTCTTAAATACT 58.806 40.000 0.00 0.00 0.00 2.12
1379 1577 6.462552 AGTACTCCCTCCGTTCTTAAATAC 57.537 41.667 0.00 0.00 0.00 1.89
1380 1578 6.097412 GGAAGTACTCCCTCCGTTCTTAAATA 59.903 42.308 0.00 0.00 38.44 1.40
1381 1579 5.105023 GGAAGTACTCCCTCCGTTCTTAAAT 60.105 44.000 0.00 0.00 38.44 1.40
1382 1580 4.221482 GGAAGTACTCCCTCCGTTCTTAAA 59.779 45.833 0.00 0.00 38.44 1.52
1383 1581 3.766051 GGAAGTACTCCCTCCGTTCTTAA 59.234 47.826 0.00 0.00 38.44 1.85
1384 1582 3.245371 TGGAAGTACTCCCTCCGTTCTTA 60.245 47.826 0.00 0.00 44.69 2.10
1385 1583 2.177734 GGAAGTACTCCCTCCGTTCTT 58.822 52.381 0.00 0.00 38.44 2.52
1386 1584 1.076677 TGGAAGTACTCCCTCCGTTCT 59.923 52.381 0.00 0.00 44.69 3.01
1387 1585 1.553706 TGGAAGTACTCCCTCCGTTC 58.446 55.000 0.00 0.00 44.69 3.95
1388 1586 2.249309 ATGGAAGTACTCCCTCCGTT 57.751 50.000 0.00 0.00 44.69 4.44
1389 1587 3.297736 CTTATGGAAGTACTCCCTCCGT 58.702 50.000 10.86 10.86 44.69 4.69
1390 1588 3.297736 ACTTATGGAAGTACTCCCTCCG 58.702 50.000 0.00 0.00 44.36 4.63
1391 1589 3.318557 CGACTTATGGAAGTACTCCCTCC 59.681 52.174 0.00 2.18 46.23 4.30
1392 1590 4.036616 GTCGACTTATGGAAGTACTCCCTC 59.963 50.000 8.70 0.00 46.23 4.30
1393 1591 3.952967 GTCGACTTATGGAAGTACTCCCT 59.047 47.826 8.70 0.00 46.23 4.20
1394 1592 3.698040 TGTCGACTTATGGAAGTACTCCC 59.302 47.826 17.92 0.00 46.23 4.30
1395 1593 4.639310 TCTGTCGACTTATGGAAGTACTCC 59.361 45.833 17.92 0.00 46.23 3.85
1396 1594 5.814764 TCTGTCGACTTATGGAAGTACTC 57.185 43.478 17.92 0.00 46.23 2.59
1399 1597 5.068723 GGGATTCTGTCGACTTATGGAAGTA 59.931 44.000 17.92 0.00 46.23 2.24
1403 1601 2.698797 GGGGATTCTGTCGACTTATGGA 59.301 50.000 17.92 4.59 0.00 3.41
1404 1602 2.700897 AGGGGATTCTGTCGACTTATGG 59.299 50.000 17.92 2.27 0.00 2.74
1430 1628 7.608153 TCAAGACGGTCATACTTCTTTTGATA 58.392 34.615 11.27 0.00 0.00 2.15
1431 1629 6.464222 TCAAGACGGTCATACTTCTTTTGAT 58.536 36.000 11.27 0.00 0.00 2.57
1432 1630 5.849510 TCAAGACGGTCATACTTCTTTTGA 58.150 37.500 11.27 5.37 0.00 2.69
1454 1652 1.954927 ATTAGGCCAAGTAGCGCTTC 58.045 50.000 18.68 11.64 34.69 3.86
1474 1672 3.132646 GCCAACTGCCCAATGATGAATAA 59.867 43.478 0.00 0.00 0.00 1.40
1526 1725 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
1528 1727 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
1529 1728 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
1530 1729 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
1531 1730 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
1544 1743 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
1545 1744 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
1546 1745 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
1547 1746 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
1548 1747 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
1549 1748 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
1550 1749 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
1551 1750 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
1552 1751 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
1553 1752 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
1554 1753 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
1555 1754 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
1556 1755 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
1557 1756 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
1558 1757 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
1559 1758 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
1560 1759 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
1561 1760 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
1562 1761 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
1563 1762 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
1564 1763 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
1565 1764 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
1566 1765 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
1567 1766 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
1568 1767 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
1569 1768 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
1570 1769 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
1571 1770 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
1572 1771 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
1573 1772 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
1574 1773 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
1575 1774 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
1576 1775 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
1577 1776 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
1578 1777 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
1579 1778 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
1580 1779 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
1581 1780 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
1582 1781 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
1621 1820 5.808366 ATGGACTCAACATACGGATGTAT 57.192 39.130 15.10 0.00 45.93 2.29
1622 1821 5.607939 AATGGACTCAACATACGGATGTA 57.392 39.130 15.10 0.00 45.93 2.29
1624 1823 4.875536 TCAAATGGACTCAACATACGGATG 59.124 41.667 5.94 5.94 39.16 3.51
1625 1824 5.097742 TCAAATGGACTCAACATACGGAT 57.902 39.130 0.00 0.00 0.00 4.18
1626 1825 4.545208 TCAAATGGACTCAACATACGGA 57.455 40.909 0.00 0.00 0.00 4.69
1627 1826 5.621197 TTTCAAATGGACTCAACATACGG 57.379 39.130 0.00 0.00 0.00 4.02
1628 1827 5.512788 GCATTTCAAATGGACTCAACATACG 59.487 40.000 12.14 0.00 0.00 3.06
1629 1828 5.807011 GGCATTTCAAATGGACTCAACATAC 59.193 40.000 12.14 0.00 0.00 2.39
1630 1829 5.716228 AGGCATTTCAAATGGACTCAACATA 59.284 36.000 12.14 0.00 0.00 2.29
1631 1830 4.529377 AGGCATTTCAAATGGACTCAACAT 59.471 37.500 12.14 0.00 0.00 2.71
1632 1831 3.896888 AGGCATTTCAAATGGACTCAACA 59.103 39.130 12.14 0.00 0.00 3.33
1633 1832 4.525912 AGGCATTTCAAATGGACTCAAC 57.474 40.909 12.14 0.00 0.00 3.18
1634 1833 5.569355 TCTAGGCATTTCAAATGGACTCAA 58.431 37.500 12.14 0.00 0.00 3.02
1635 1834 5.178096 TCTAGGCATTTCAAATGGACTCA 57.822 39.130 12.14 0.00 0.00 3.41
1636 1835 6.375455 TCTTTCTAGGCATTTCAAATGGACTC 59.625 38.462 12.14 0.00 0.00 3.36
1637 1836 6.151817 GTCTTTCTAGGCATTTCAAATGGACT 59.848 38.462 12.14 3.08 0.00 3.85
1638 1837 6.071952 TGTCTTTCTAGGCATTTCAAATGGAC 60.072 38.462 12.14 8.23 29.10 4.02
1639 1838 6.009589 TGTCTTTCTAGGCATTTCAAATGGA 58.990 36.000 12.14 0.00 29.10 3.41
1640 1839 6.271488 TGTCTTTCTAGGCATTTCAAATGG 57.729 37.500 12.14 0.00 29.10 3.16
1641 1840 8.767478 ATTTGTCTTTCTAGGCATTTCAAATG 57.233 30.769 5.68 5.68 35.56 2.32
1645 1844 9.859427 CAAATATTTGTCTTTCTAGGCATTTCA 57.141 29.630 18.32 0.00 35.56 2.69
1646 1845 9.305925 CCAAATATTTGTCTTTCTAGGCATTTC 57.694 33.333 23.24 0.00 35.56 2.17
1647 1846 8.260114 CCCAAATATTTGTCTTTCTAGGCATTT 58.740 33.333 23.24 0.00 35.56 2.32
1648 1847 7.619302 TCCCAAATATTTGTCTTTCTAGGCATT 59.381 33.333 23.24 0.00 35.56 3.56
1649 1848 7.125391 TCCCAAATATTTGTCTTTCTAGGCAT 58.875 34.615 23.24 0.00 35.56 4.40
1650 1849 6.489603 TCCCAAATATTTGTCTTTCTAGGCA 58.510 36.000 23.24 5.94 36.45 4.75
1651 1850 7.258441 GTTCCCAAATATTTGTCTTTCTAGGC 58.742 38.462 23.24 3.57 36.45 3.93
1652 1851 7.415206 CCGTTCCCAAATATTTGTCTTTCTAGG 60.415 40.741 23.24 15.51 36.45 3.02
1653 1852 7.335924 TCCGTTCCCAAATATTTGTCTTTCTAG 59.664 37.037 23.24 8.23 36.45 2.43
1654 1853 7.169591 TCCGTTCCCAAATATTTGTCTTTCTA 58.830 34.615 23.24 5.03 36.45 2.10
1655 1854 6.007703 TCCGTTCCCAAATATTTGTCTTTCT 58.992 36.000 23.24 0.00 36.45 2.52
1656 1855 6.262193 TCCGTTCCCAAATATTTGTCTTTC 57.738 37.500 23.24 10.84 36.45 2.62
1657 1856 5.185056 CCTCCGTTCCCAAATATTTGTCTTT 59.815 40.000 23.24 0.00 36.45 2.52
1658 1857 4.705023 CCTCCGTTCCCAAATATTTGTCTT 59.295 41.667 23.24 0.00 36.45 3.01
1659 1858 4.270008 CCTCCGTTCCCAAATATTTGTCT 58.730 43.478 23.24 0.00 36.45 3.41
1660 1859 3.380320 CCCTCCGTTCCCAAATATTTGTC 59.620 47.826 23.24 11.68 36.45 3.18
1661 1860 3.010808 TCCCTCCGTTCCCAAATATTTGT 59.989 43.478 23.24 0.00 36.45 2.83
1662 1861 3.626930 TCCCTCCGTTCCCAAATATTTG 58.373 45.455 19.40 19.40 37.90 2.32
1663 1862 3.268595 ACTCCCTCCGTTCCCAAATATTT 59.731 43.478 0.00 0.00 0.00 1.40
1664 1863 2.850568 ACTCCCTCCGTTCCCAAATATT 59.149 45.455 0.00 0.00 0.00 1.28
1665 1864 2.488836 ACTCCCTCCGTTCCCAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
1666 1865 1.961133 ACTCCCTCCGTTCCCAAATA 58.039 50.000 0.00 0.00 0.00 1.40
1667 1866 1.838077 CTACTCCCTCCGTTCCCAAAT 59.162 52.381 0.00 0.00 0.00 2.32
1668 1867 1.272807 CTACTCCCTCCGTTCCCAAA 58.727 55.000 0.00 0.00 0.00 3.28
1669 1868 0.115745 ACTACTCCCTCCGTTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
1670 1869 1.002069 TACTACTCCCTCCGTTCCCA 58.998 55.000 0.00 0.00 0.00 4.37
1671 1870 1.341383 TGTACTACTCCCTCCGTTCCC 60.341 57.143 0.00 0.00 0.00 3.97
1672 1871 1.747924 GTGTACTACTCCCTCCGTTCC 59.252 57.143 0.00 0.00 0.00 3.62
1673 1872 2.422832 CTGTGTACTACTCCCTCCGTTC 59.577 54.545 0.00 0.00 0.00 3.95
1674 1873 2.444421 CTGTGTACTACTCCCTCCGTT 58.556 52.381 0.00 0.00 0.00 4.44
1675 1874 1.954258 GCTGTGTACTACTCCCTCCGT 60.954 57.143 0.00 0.00 0.00 4.69
1676 1875 0.739561 GCTGTGTACTACTCCCTCCG 59.260 60.000 0.00 0.00 0.00 4.63
1677 1876 1.848652 TGCTGTGTACTACTCCCTCC 58.151 55.000 0.00 0.00 0.00 4.30
1678 1877 2.415625 CGTTGCTGTGTACTACTCCCTC 60.416 54.545 0.00 0.00 0.00 4.30
1679 1878 1.544691 CGTTGCTGTGTACTACTCCCT 59.455 52.381 0.00 0.00 0.00 4.20
1680 1879 1.542915 TCGTTGCTGTGTACTACTCCC 59.457 52.381 0.00 0.00 0.00 4.30
1681 1880 2.593257 GTCGTTGCTGTGTACTACTCC 58.407 52.381 0.00 0.00 0.00 3.85
1682 1881 2.240040 CGTCGTTGCTGTGTACTACTC 58.760 52.381 0.00 0.00 0.00 2.59
1794 2027 4.079827 CCCCCTCCTCTGCTTCAT 57.920 61.111 0.00 0.00 0.00 2.57
1854 2087 4.522022 AGCAAGAGAGCAAATAAAGCACTT 59.478 37.500 0.00 0.00 33.06 3.16
1963 2221 2.731451 GCGCCAAGACAAAATTTCCTTC 59.269 45.455 0.00 0.00 0.00 3.46
1964 2222 2.754472 GCGCCAAGACAAAATTTCCTT 58.246 42.857 0.00 0.00 0.00 3.36
1987 2245 2.031682 CCAAGAGCAAAGGAACGAACAG 60.032 50.000 0.00 0.00 0.00 3.16
2040 2298 4.135153 CTGTCTCCGCCGGACCAG 62.135 72.222 5.05 7.76 33.22 4.00
2049 2307 2.287915 CACAAACTGTTTCCTGTCTCCG 59.712 50.000 2.13 0.00 0.00 4.63
2088 2346 0.967887 CAAGAGGAGAGAGGCACGGA 60.968 60.000 0.00 0.00 0.00 4.69
2118 2376 7.097834 AGTAACTAAACTGATAAGCCACTGAC 58.902 38.462 0.00 0.00 0.00 3.51
2174 2432 1.896220 TGGATCAAAGTGCAGACCAC 58.104 50.000 0.00 0.00 45.01 4.16
2185 2443 4.033932 CGAACAGTGCGATTATGGATCAAA 59.966 41.667 0.00 0.00 34.23 2.69
2206 2464 1.134220 AGTGAACAAAAGGAGTGCCGA 60.134 47.619 0.00 0.00 39.96 5.54
2246 2511 1.077285 CCATGCTGCCATCACCTGA 60.077 57.895 0.00 0.00 0.00 3.86
2298 2563 4.515567 CAGGCCGGGATAAAAATAGAGAAC 59.484 45.833 2.18 0.00 0.00 3.01
2369 2634 3.322541 TGATCACCTTGAAGACACGGTTA 59.677 43.478 0.00 0.00 44.48 2.85
2395 2660 7.621428 ACAAATCATCAACAGTAGGAATCAG 57.379 36.000 0.00 0.00 0.00 2.90
2482 2748 8.437360 TGAGCCACAGAAAATAAGTGTATATG 57.563 34.615 0.00 0.00 0.00 1.78
2592 2864 5.966503 GTGTTTACAAATTTACACGTGCTCA 59.033 36.000 17.22 0.00 32.56 4.26
2593 2865 5.966503 TGTGTTTACAAATTTACACGTGCTC 59.033 36.000 17.22 0.00 42.81 4.26
2622 2895 6.704493 CCTGAATTGGCATTCCATATTTTCAG 59.296 38.462 14.35 14.35 43.05 3.02
2632 2905 3.701205 AAAACCCTGAATTGGCATTCC 57.299 42.857 0.00 0.00 38.50 3.01
2682 2956 5.163447 CGGAGGGAGTACATACAAATTCAGA 60.163 44.000 0.00 0.00 0.00 3.27
2700 2974 6.259387 ACGCTTTTATATTTCTTTACGGAGGG 59.741 38.462 0.00 0.00 0.00 4.30
2701 2975 7.242914 ACGCTTTTATATTTCTTTACGGAGG 57.757 36.000 0.00 0.00 0.00 4.30
2717 2991 9.918630 ACTAAAGTAGTGATCTAAACGCTTTTA 57.081 29.630 10.23 0.00 37.69 1.52
2718 2992 8.828688 ACTAAAGTAGTGATCTAAACGCTTTT 57.171 30.769 10.23 0.00 37.69 2.27
2750 3024 9.765795 CCCTCTGTAAAGAAATATAAGATCGTT 57.234 33.333 0.00 0.00 0.00 3.85
2751 3025 9.144298 TCCCTCTGTAAAGAAATATAAGATCGT 57.856 33.333 0.00 0.00 0.00 3.73
2752 3026 9.413048 GTCCCTCTGTAAAGAAATATAAGATCG 57.587 37.037 0.00 0.00 0.00 3.69
2761 3035 8.822805 TGTAATGTAGTCCCTCTGTAAAGAAAT 58.177 33.333 0.00 0.00 0.00 2.17
2762 3036 8.197592 TGTAATGTAGTCCCTCTGTAAAGAAA 57.802 34.615 0.00 0.00 0.00 2.52
2763 3037 7.672660 TCTGTAATGTAGTCCCTCTGTAAAGAA 59.327 37.037 0.00 0.00 0.00 2.52
2764 3038 7.179966 TCTGTAATGTAGTCCCTCTGTAAAGA 58.820 38.462 0.00 0.00 0.00 2.52
2765 3039 7.339721 TCTCTGTAATGTAGTCCCTCTGTAAAG 59.660 40.741 0.00 0.00 0.00 1.85
2766 3040 7.179966 TCTCTGTAATGTAGTCCCTCTGTAAA 58.820 38.462 0.00 0.00 0.00 2.01
2767 3041 6.728411 TCTCTGTAATGTAGTCCCTCTGTAA 58.272 40.000 0.00 0.00 0.00 2.41
2768 3042 6.323210 TCTCTGTAATGTAGTCCCTCTGTA 57.677 41.667 0.00 0.00 0.00 2.74
2769 3043 5.194473 TCTCTGTAATGTAGTCCCTCTGT 57.806 43.478 0.00 0.00 0.00 3.41
2770 3044 6.322456 TGAATCTCTGTAATGTAGTCCCTCTG 59.678 42.308 0.00 0.00 0.00 3.35
2771 3045 6.436027 TGAATCTCTGTAATGTAGTCCCTCT 58.564 40.000 0.00 0.00 0.00 3.69
2772 3046 6.716934 TGAATCTCTGTAATGTAGTCCCTC 57.283 41.667 0.00 0.00 0.00 4.30
2773 3047 7.682787 AATGAATCTCTGTAATGTAGTCCCT 57.317 36.000 0.00 0.00 0.00 4.20
2774 3048 9.429359 CATAATGAATCTCTGTAATGTAGTCCC 57.571 37.037 0.00 0.00 0.00 4.46
2775 3049 8.930760 GCATAATGAATCTCTGTAATGTAGTCC 58.069 37.037 0.00 0.00 0.00 3.85
2776 3050 9.703892 AGCATAATGAATCTCTGTAATGTAGTC 57.296 33.333 0.00 0.00 0.00 2.59
2848 3122 4.241681 CTGAGACAAGTCTTAGAAGGTGC 58.758 47.826 14.75 0.00 43.56 5.01
2908 3194 2.825532 GGGATGGCAGCAAAACTAAAGA 59.174 45.455 4.64 0.00 0.00 2.52
2950 3241 1.943116 CTCAGCTCAGGAGACCCACG 61.943 65.000 0.00 0.00 34.24 4.94
3302 3610 5.257082 TGTTACAAAAGCAAGAGGAAACC 57.743 39.130 0.00 0.00 0.00 3.27
3330 3638 1.138036 CAGCAACATCATGGCGTGG 59.862 57.895 6.90 0.00 0.00 4.94
3460 3768 4.498177 GCTCAACAAGGTTGGAACTTCTTC 60.498 45.833 9.03 0.00 0.00 2.87
3546 3854 6.763610 AGCTTATAAGACTTATGTGCCTTGTC 59.236 38.462 16.85 0.00 0.00 3.18
3586 3894 4.282703 GTGTTGTCTTACCAACTCCTCCTA 59.717 45.833 5.73 0.00 44.01 2.94
3654 3962 0.664761 CAAATCCATGCCCGTAGCTG 59.335 55.000 0.00 0.00 44.23 4.24
3661 3969 2.036992 TGTGAAACACAAATCCATGCCC 59.963 45.455 1.99 0.00 45.67 5.36
4278 4586 7.562135 ACTACACCACGGTAAATGATAGAATT 58.438 34.615 0.00 0.00 0.00 2.17
4354 4662 2.057316 CTTCTGCTGTGTCTTCGAGTG 58.943 52.381 0.00 0.00 0.00 3.51
4358 4666 0.034059 ACCCTTCTGCTGTGTCTTCG 59.966 55.000 0.00 0.00 0.00 3.79
4509 4817 2.360801 CACCCCTCAATGTTTCAACGTT 59.639 45.455 0.00 0.00 38.61 3.99
4871 5184 0.107214 ACAATTGGGTCATCGCCGAT 60.107 50.000 10.83 0.00 0.00 4.18
5574 5893 2.104451 CACCATCCTCTCCTCCTTCATG 59.896 54.545 0.00 0.00 0.00 3.07
5656 5975 3.791353 GCAACCTTCAACTTTCAACTTCG 59.209 43.478 0.00 0.00 0.00 3.79
6160 6492 7.065085 ACGATTTATGCAGCTATCCAATATGAC 59.935 37.037 0.00 0.00 0.00 3.06
6265 6602 2.016318 CGGTACATGCATGTGGACATT 58.984 47.619 36.72 14.89 41.89 2.71
6395 7080 2.540931 CTGCCACAATTTTGTTCAGCAC 59.459 45.455 7.92 0.00 39.91 4.40
6457 7148 4.054671 GACAGGCTTAGTACATCTCATGC 58.945 47.826 0.00 0.00 0.00 4.06
6459 7150 5.939764 TTGACAGGCTTAGTACATCTCAT 57.060 39.130 0.00 0.00 0.00 2.90
6463 7154 4.770795 ACCATTGACAGGCTTAGTACATC 58.229 43.478 0.00 0.00 0.00 3.06
6465 7156 5.748670 TTACCATTGACAGGCTTAGTACA 57.251 39.130 0.00 0.00 0.00 2.90
6466 7157 6.403878 TCTTTACCATTGACAGGCTTAGTAC 58.596 40.000 0.00 0.00 0.00 2.73
6513 7231 1.843851 ACACTTCCTTCACCAGGTTGA 59.156 47.619 0.00 0.00 44.37 3.18
6517 7235 3.633361 GGACACTTCCTTCACCAGG 57.367 57.895 0.00 0.00 45.64 4.45
6527 7245 4.001618 AGAGAAAGAAGCAGGACACTTC 57.998 45.455 0.00 0.00 43.16 3.01
6528 7246 4.429854 AAGAGAAAGAAGCAGGACACTT 57.570 40.909 0.00 0.00 0.00 3.16
6529 7247 4.020662 CCTAAGAGAAAGAAGCAGGACACT 60.021 45.833 0.00 0.00 0.00 3.55
6530 7248 4.249661 CCTAAGAGAAAGAAGCAGGACAC 58.750 47.826 0.00 0.00 0.00 3.67
6531 7249 3.261897 CCCTAAGAGAAAGAAGCAGGACA 59.738 47.826 0.00 0.00 0.00 4.02
6532 7250 3.867857 CCCTAAGAGAAAGAAGCAGGAC 58.132 50.000 0.00 0.00 0.00 3.85
6533 7251 2.237392 GCCCTAAGAGAAAGAAGCAGGA 59.763 50.000 0.00 0.00 0.00 3.86
6534 7252 2.026822 TGCCCTAAGAGAAAGAAGCAGG 60.027 50.000 0.00 0.00 0.00 4.85
6535 7253 3.340814 TGCCCTAAGAGAAAGAAGCAG 57.659 47.619 0.00 0.00 0.00 4.24
6536 7254 3.073062 ACTTGCCCTAAGAGAAAGAAGCA 59.927 43.478 0.00 0.00 39.76 3.91
6537 7255 3.438434 CACTTGCCCTAAGAGAAAGAAGC 59.562 47.826 0.00 0.00 39.76 3.86
6538 7256 3.438434 GCACTTGCCCTAAGAGAAAGAAG 59.562 47.826 0.00 0.00 39.76 2.85
6612 7333 7.398024 ACATTTTCAGTATAGCAAAGGTCTCT 58.602 34.615 0.00 0.00 0.00 3.10
6668 7392 7.063780 TCAGAGGTAAATAAAACGAAATCGGTC 59.936 37.037 7.81 0.00 39.00 4.79
6688 7412 1.001641 CTGGCCCCAAGTTCAGAGG 60.002 63.158 0.00 0.00 0.00 3.69
6689 7413 0.035630 CTCTGGCCCCAAGTTCAGAG 60.036 60.000 0.00 0.00 44.50 3.35
6751 7475 5.962433 AGAATTCAATCATGCCAAAGTGAG 58.038 37.500 8.44 0.00 0.00 3.51
6775 7500 4.256920 CCAAACCCATCACTTCTACTCAG 58.743 47.826 0.00 0.00 0.00 3.35
6791 7523 6.203915 AGTTCAGAAACAAACAAAACCAAACC 59.796 34.615 0.00 0.00 37.88 3.27
6796 7528 5.121611 CCCAAGTTCAGAAACAAACAAAACC 59.878 40.000 0.00 0.00 37.88 3.27
6920 7673 2.987282 ATTCACCGCACTGCACACGA 62.987 55.000 1.11 0.00 0.00 4.35
6973 7742 1.095228 TCATCTTCCGCATTTCCGCC 61.095 55.000 0.00 0.00 0.00 6.13
7076 7849 7.573968 ATTAATCTGTAATCCCAAGAACAGC 57.426 36.000 0.00 0.00 39.33 4.40
7107 7888 4.572389 CGCTTCAGTTTAATCATAGCCAGT 59.428 41.667 0.00 0.00 0.00 4.00
7201 7982 8.682710 TGCTTCCCATGTAAACAAATATAAGAC 58.317 33.333 0.00 0.00 0.00 3.01
7203 7984 8.686334 ACTGCTTCCCATGTAAACAAATATAAG 58.314 33.333 0.00 0.00 0.00 1.73
7235 8016 2.213499 GTGGGATCTTCCATGCGTAAG 58.787 52.381 0.00 0.00 38.64 2.34
7297 8079 0.172578 TTCGTCCATGAGTACAGCCG 59.827 55.000 0.00 0.00 0.00 5.52
7303 8085 3.056179 TGATTGCAGTTCGTCCATGAGTA 60.056 43.478 0.00 0.00 0.00 2.59
7399 8181 1.142667 TGCTGATGACCAGTGACCAAA 59.857 47.619 0.00 0.00 44.71 3.28
7425 8207 1.828595 TGCTCGGTCCAACTAGCATTA 59.171 47.619 0.00 0.00 39.92 1.90
7539 8329 7.833786 TCTAGTTTTCCGTTTCATAGAAGCTA 58.166 34.615 0.00 0.00 0.00 3.32
7572 8362 1.043022 GGCTAATTCTTGGGCCCATG 58.957 55.000 29.23 28.54 38.77 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.