Multiple sequence alignment - TraesCS3B01G082400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G082400 chr3B 100.000 5006 0 0 1 5006 51946788 51951793 0.000000e+00 9245.0
1 TraesCS3B01G082400 chr3B 97.185 4547 93 16 477 5006 51228007 51232535 0.000000e+00 7655.0
2 TraesCS3B01G082400 chr3B 97.895 2280 43 2 477 2751 51771083 51773362 0.000000e+00 3940.0
3 TraesCS3B01G082400 chr3B 84.070 3032 399 41 610 3579 52854139 52851130 0.000000e+00 2846.0
4 TraesCS3B01G082400 chr3B 84.653 2678 393 17 911 3579 52426243 52428911 0.000000e+00 2652.0
5 TraesCS3B01G082400 chr3B 83.893 2682 405 23 910 3576 51726953 51729622 0.000000e+00 2534.0
6 TraesCS3B01G082400 chr3B 83.346 2606 392 26 983 3579 52839484 52836912 0.000000e+00 2370.0
7 TraesCS3B01G082400 chr3B 89.173 1524 116 19 477 1987 52436195 52437682 0.000000e+00 1855.0
8 TraesCS3B01G082400 chr3B 83.673 1127 166 15 2465 3579 52415613 52416733 0.000000e+00 1046.0
9 TraesCS3B01G082400 chr3B 96.783 373 9 2 1 373 52435827 52436196 1.980000e-173 619.0
10 TraesCS3B01G082400 chr3B 96.247 373 7 3 1 373 51227643 51228008 5.540000e-169 604.0
11 TraesCS3B01G082400 chr3B 83.333 468 74 4 3608 4073 52739995 52739530 3.580000e-116 429.0
12 TraesCS3B01G082400 chr3B 97.009 234 4 1 140 373 51770854 51771084 1.690000e-104 390.0
13 TraesCS3B01G082400 chr3B 81.119 429 73 6 3589 4011 51805262 51805688 2.230000e-88 337.0
14 TraesCS3B01G082400 chr3B 81.951 410 63 7 3647 4047 52775060 52774653 2.230000e-88 337.0
15 TraesCS3B01G082400 chr3B 92.105 228 15 3 548 774 52778245 52778020 8.090000e-83 318.0
16 TraesCS3B01G082400 chr3B 83.056 301 47 4 3283 3579 52456913 52457213 2.300000e-68 270.0
17 TraesCS3B01G082400 chr3B 79.894 378 33 16 1 373 52778634 52778295 2.330000e-58 237.0
18 TraesCS3B01G082400 chr3B 83.146 89 10 4 252 339 51788889 51788973 5.370000e-10 76.8
19 TraesCS3B01G082400 chr3A 93.004 2187 143 8 606 2788 40917690 40919870 0.000000e+00 3182.0
20 TraesCS3B01G082400 chr3A 83.140 3197 487 38 910 4067 41616630 41619813 0.000000e+00 2870.0
21 TraesCS3B01G082400 chr3A 83.476 2687 415 26 913 3580 41149873 41152549 0.000000e+00 2475.0
22 TraesCS3B01G082400 chr3A 83.352 2685 417 26 912 3576 40936282 40938956 0.000000e+00 2455.0
23 TraesCS3B01G082400 chr3A 85.140 2039 220 32 610 2578 41354639 41356664 0.000000e+00 2010.0
24 TraesCS3B01G082400 chr3A 84.610 1371 149 38 3660 4980 40939085 40940443 0.000000e+00 1306.0
25 TraesCS3B01G082400 chr3A 82.281 491 77 9 3592 4077 42019549 42020034 2.790000e-112 416.0
26 TraesCS3B01G082400 chr3A 82.436 427 69 6 3589 4012 41239676 41240099 7.920000e-98 368.0
27 TraesCS3B01G082400 chr3A 77.812 329 60 6 4418 4743 41051625 41051943 1.840000e-44 191.0
28 TraesCS3B01G082400 chr3A 92.857 126 9 0 354 479 359365349 359365474 3.080000e-42 183.0
29 TraesCS3B01G082400 chr3A 79.897 194 34 4 4545 4735 41240994 41241185 2.430000e-28 137.0
30 TraesCS3B01G082400 chr3A 80.808 99 18 1 4416 4513 41372719 41372817 5.370000e-10 76.8
31 TraesCS3B01G082400 chr3D 85.231 2688 368 21 910 3579 30006612 30009288 0.000000e+00 2737.0
32 TraesCS3B01G082400 chr3D 83.402 488 77 4 3592 4077 30280963 30281448 2.750000e-122 449.0
33 TraesCS3B01G082400 chr3D 81.460 507 82 10 3593 4092 30061091 30061592 6.030000e-109 405.0
34 TraesCS3B01G082400 chr3D 86.875 160 17 3 1 160 30063920 30064075 5.150000e-40 176.0
35 TraesCS3B01G082400 chr3D 83.333 108 13 1 659 766 29970496 29970598 1.480000e-15 95.3
36 TraesCS3B01G082400 chr2B 82.289 2682 443 19 910 3576 788096832 788099496 0.000000e+00 2292.0
37 TraesCS3B01G082400 chr4A 96.639 119 4 0 365 483 617363052 617362934 1.100000e-46 198.0
38 TraesCS3B01G082400 chr7D 97.391 115 3 0 367 481 227507116 227507230 3.950000e-46 196.0
39 TraesCS3B01G082400 chr7A 97.368 114 3 0 368 481 513215582 513215695 1.420000e-45 195.0
40 TraesCS3B01G082400 chr7A 97.059 34 0 1 578 610 139671982 139671949 7.000000e-04 56.5
41 TraesCS3B01G082400 chr6A 95.833 120 5 0 365 484 422165575 422165694 1.420000e-45 195.0
42 TraesCS3B01G082400 chr5D 96.552 116 4 0 372 487 339105174 339105059 5.110000e-45 193.0
43 TraesCS3B01G082400 chr5B 94.400 125 5 2 355 478 286884182 286884305 1.840000e-44 191.0
44 TraesCS3B01G082400 chr6D 92.481 133 7 3 347 478 457693967 457694097 2.380000e-43 187.0
45 TraesCS3B01G082400 chr5A 93.077 130 5 4 370 495 246293579 246293708 2.380000e-43 187.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G082400 chr3B 51946788 51951793 5005 False 9245.000000 9245 100.0000 1 5006 1 chr3B.!!$F4 5005
1 TraesCS3B01G082400 chr3B 51227643 51232535 4892 False 4129.500000 7655 96.7160 1 5006 2 chr3B.!!$F8 5005
2 TraesCS3B01G082400 chr3B 52851130 52854139 3009 True 2846.000000 2846 84.0700 610 3579 1 chr3B.!!$R3 2969
3 TraesCS3B01G082400 chr3B 52426243 52428911 2668 False 2652.000000 2652 84.6530 911 3579 1 chr3B.!!$F6 2668
4 TraesCS3B01G082400 chr3B 51726953 51729622 2669 False 2534.000000 2534 83.8930 910 3576 1 chr3B.!!$F1 2666
5 TraesCS3B01G082400 chr3B 52836912 52839484 2572 True 2370.000000 2370 83.3460 983 3579 1 chr3B.!!$R2 2596
6 TraesCS3B01G082400 chr3B 51770854 51773362 2508 False 2165.000000 3940 97.4520 140 2751 2 chr3B.!!$F9 2611
7 TraesCS3B01G082400 chr3B 52435827 52437682 1855 False 1237.000000 1855 92.9780 1 1987 2 chr3B.!!$F10 1986
8 TraesCS3B01G082400 chr3B 52415613 52416733 1120 False 1046.000000 1046 83.6730 2465 3579 1 chr3B.!!$F5 1114
9 TraesCS3B01G082400 chr3B 52774653 52778634 3981 True 297.333333 337 84.6500 1 4047 3 chr3B.!!$R4 4046
10 TraesCS3B01G082400 chr3A 40917690 40919870 2180 False 3182.000000 3182 93.0040 606 2788 1 chr3A.!!$F1 2182
11 TraesCS3B01G082400 chr3A 41616630 41619813 3183 False 2870.000000 2870 83.1400 910 4067 1 chr3A.!!$F6 3157
12 TraesCS3B01G082400 chr3A 41149873 41152549 2676 False 2475.000000 2475 83.4760 913 3580 1 chr3A.!!$F3 2667
13 TraesCS3B01G082400 chr3A 41354639 41356664 2025 False 2010.000000 2010 85.1400 610 2578 1 chr3A.!!$F4 1968
14 TraesCS3B01G082400 chr3A 40936282 40940443 4161 False 1880.500000 2455 83.9810 912 4980 2 chr3A.!!$F9 4068
15 TraesCS3B01G082400 chr3A 41239676 41241185 1509 False 252.500000 368 81.1665 3589 4735 2 chr3A.!!$F10 1146
16 TraesCS3B01G082400 chr3D 30006612 30009288 2676 False 2737.000000 2737 85.2310 910 3579 1 chr3D.!!$F2 2669
17 TraesCS3B01G082400 chr3D 30061091 30064075 2984 False 290.500000 405 84.1675 1 4092 2 chr3D.!!$F4 4091
18 TraesCS3B01G082400 chr2B 788096832 788099496 2664 False 2292.000000 2292 82.2890 910 3576 1 chr2B.!!$F1 2666

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
387 393 0.038744 AACTACTCCCTCCGTTCGGA 59.961 55.000 13.34 13.34 0.00 4.55 F
469 475 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44 F
695 717 1.331214 CATTGGATGGCGCCCTTAAT 58.669 50.000 26.77 16.01 0.00 1.40 F
2327 2458 1.468520 CATTCGGCGTGGAGAAATTGT 59.531 47.619 6.85 0.00 0.00 2.71 F
2649 2783 5.131067 GTGGAAGTTAAGGTGAGGACTTTT 58.869 41.667 0.00 0.00 32.85 2.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2327 2458 2.421388 CCTTCAGCAATCCATAACCGGA 60.421 50.000 9.46 0.00 40.07 5.14 R
2396 2527 6.151312 TCGATGGATTAGCTCATAGAAGTACC 59.849 42.308 0.00 0.00 0.00 3.34 R
2649 2783 3.070878 TCTGTGCACCATGAACACTTAGA 59.929 43.478 15.69 2.54 35.33 2.10 R
3590 3772 0.037975 CAACCTTGCAGAATGGGCAC 60.038 55.000 0.00 0.00 41.75 5.01 R
4558 5337 0.607489 CTGTGGCCTCAAGTTCAGGG 60.607 60.000 9.14 0.00 0.00 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
108 114 0.908910 TGATCTGTATTGCGGTGGGT 59.091 50.000 0.00 0.00 0.00 4.51
120 126 2.113986 GTGGGTGGCACTGCTTCT 59.886 61.111 18.45 0.00 0.00 2.85
373 379 8.922058 TTCATTAGTCCAGTCGAATAAACTAC 57.078 34.615 6.15 0.00 34.88 2.73
374 380 8.289939 TCATTAGTCCAGTCGAATAAACTACT 57.710 34.615 6.15 0.28 34.88 2.57
375 381 8.404000 TCATTAGTCCAGTCGAATAAACTACTC 58.596 37.037 6.15 0.00 34.88 2.59
376 382 5.579564 AGTCCAGTCGAATAAACTACTCC 57.420 43.478 0.00 0.00 0.00 3.85
377 383 4.401837 AGTCCAGTCGAATAAACTACTCCC 59.598 45.833 0.00 0.00 0.00 4.30
378 384 4.401837 GTCCAGTCGAATAAACTACTCCCT 59.598 45.833 0.00 0.00 0.00 4.20
379 385 4.643784 TCCAGTCGAATAAACTACTCCCTC 59.356 45.833 0.00 0.00 0.00 4.30
380 386 4.202131 CCAGTCGAATAAACTACTCCCTCC 60.202 50.000 0.00 0.00 0.00 4.30
381 387 3.631227 AGTCGAATAAACTACTCCCTCCG 59.369 47.826 0.00 0.00 0.00 4.63
382 388 3.379688 GTCGAATAAACTACTCCCTCCGT 59.620 47.826 0.00 0.00 0.00 4.69
383 389 4.019174 TCGAATAAACTACTCCCTCCGTT 58.981 43.478 0.00 0.00 0.00 4.44
384 390 4.096984 TCGAATAAACTACTCCCTCCGTTC 59.903 45.833 0.00 0.00 0.00 3.95
385 391 4.357996 GAATAAACTACTCCCTCCGTTCG 58.642 47.826 0.00 0.00 0.00 3.95
386 392 0.893447 AAACTACTCCCTCCGTTCGG 59.107 55.000 4.74 4.74 0.00 4.30
387 393 0.038744 AACTACTCCCTCCGTTCGGA 59.961 55.000 13.34 13.34 0.00 4.55
388 394 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
389 395 1.341778 ACTACTCCCTCCGTTCGGAAT 60.342 52.381 14.79 2.09 33.41 3.01
390 396 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
391 397 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
392 398 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
393 399 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
394 400 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
395 401 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
396 402 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
397 403 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
398 404 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
399 405 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
400 406 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
401 407 2.597305 CGTTCGGAATTACTTGTCTCGG 59.403 50.000 0.00 0.00 0.00 4.63
402 408 3.671433 CGTTCGGAATTACTTGTCTCGGA 60.671 47.826 0.00 0.00 0.00 4.55
403 409 4.240096 GTTCGGAATTACTTGTCTCGGAA 58.760 43.478 0.00 0.00 0.00 4.30
404 410 4.524316 TCGGAATTACTTGTCTCGGAAA 57.476 40.909 0.00 0.00 0.00 3.13
405 411 5.080969 TCGGAATTACTTGTCTCGGAAAT 57.919 39.130 0.00 0.00 0.00 2.17
406 412 4.868171 TCGGAATTACTTGTCTCGGAAATG 59.132 41.667 0.00 0.00 0.00 2.32
407 413 4.034048 CGGAATTACTTGTCTCGGAAATGG 59.966 45.833 0.00 0.00 0.00 3.16
408 414 5.183228 GGAATTACTTGTCTCGGAAATGGA 58.817 41.667 0.00 0.00 0.00 3.41
409 415 5.823045 GGAATTACTTGTCTCGGAAATGGAT 59.177 40.000 0.00 0.00 0.00 3.41
410 416 6.238484 GGAATTACTTGTCTCGGAAATGGATG 60.238 42.308 0.00 0.00 0.00 3.51
411 417 3.703001 ACTTGTCTCGGAAATGGATGT 57.297 42.857 0.00 0.00 0.00 3.06
412 418 4.819105 ACTTGTCTCGGAAATGGATGTA 57.181 40.909 0.00 0.00 0.00 2.29
413 419 5.359194 ACTTGTCTCGGAAATGGATGTAT 57.641 39.130 0.00 0.00 0.00 2.29
414 420 5.360591 ACTTGTCTCGGAAATGGATGTATC 58.639 41.667 0.00 0.00 0.00 2.24
415 421 5.129485 ACTTGTCTCGGAAATGGATGTATCT 59.871 40.000 0.00 0.00 0.00 1.98
416 422 6.323996 ACTTGTCTCGGAAATGGATGTATCTA 59.676 38.462 0.00 0.00 0.00 1.98
417 423 6.332735 TGTCTCGGAAATGGATGTATCTAG 57.667 41.667 0.00 0.00 0.00 2.43
418 424 6.068670 TGTCTCGGAAATGGATGTATCTAGA 58.931 40.000 0.00 0.00 0.00 2.43
419 425 6.549736 TGTCTCGGAAATGGATGTATCTAGAA 59.450 38.462 0.00 0.00 0.00 2.10
420 426 6.864165 GTCTCGGAAATGGATGTATCTAGAAC 59.136 42.308 0.00 0.00 0.00 3.01
421 427 6.778069 TCTCGGAAATGGATGTATCTAGAACT 59.222 38.462 0.00 0.00 0.00 3.01
422 428 7.942894 TCTCGGAAATGGATGTATCTAGAACTA 59.057 37.037 0.00 0.00 0.00 2.24
423 429 8.473358 TCGGAAATGGATGTATCTAGAACTAA 57.527 34.615 0.00 0.00 0.00 2.24
424 430 8.920174 TCGGAAATGGATGTATCTAGAACTAAA 58.080 33.333 0.00 0.00 0.00 1.85
425 431 9.542462 CGGAAATGGATGTATCTAGAACTAAAA 57.458 33.333 0.00 0.00 0.00 1.52
429 435 9.751542 AATGGATGTATCTAGAACTAAAAGACG 57.248 33.333 0.00 0.00 0.00 4.18
430 436 8.289939 TGGATGTATCTAGAACTAAAAGACGT 57.710 34.615 0.00 0.00 0.00 4.34
431 437 8.404000 TGGATGTATCTAGAACTAAAAGACGTC 58.596 37.037 7.70 7.70 0.00 4.34
432 438 8.623030 GGATGTATCTAGAACTAAAAGACGTCT 58.377 37.037 13.58 13.58 0.00 4.18
435 441 9.881649 TGTATCTAGAACTAAAAGACGTCTAGA 57.118 33.333 20.39 14.48 38.94 2.43
439 445 9.881649 TCTAGAACTAAAAGACGTCTAGATACA 57.118 33.333 20.39 0.43 32.48 2.29
442 448 8.623030 AGAACTAAAAGACGTCTAGATACATCC 58.377 37.037 20.39 4.03 0.00 3.51
443 449 7.876936 ACTAAAAGACGTCTAGATACATCCA 57.123 36.000 20.39 0.00 0.00 3.41
444 450 8.466617 ACTAAAAGACGTCTAGATACATCCAT 57.533 34.615 20.39 0.00 0.00 3.41
445 451 8.915036 ACTAAAAGACGTCTAGATACATCCATT 58.085 33.333 20.39 1.38 0.00 3.16
446 452 9.751542 CTAAAAGACGTCTAGATACATCCATTT 57.248 33.333 20.39 12.85 0.00 2.32
448 454 9.449719 AAAAGACGTCTAGATACATCCATTTTT 57.550 29.630 20.39 7.36 0.00 1.94
449 455 8.425577 AAGACGTCTAGATACATCCATTTTTG 57.574 34.615 20.39 0.00 0.00 2.44
450 456 6.480320 AGACGTCTAGATACATCCATTTTTGC 59.520 38.462 18.46 0.00 0.00 3.68
451 457 5.234329 ACGTCTAGATACATCCATTTTTGCG 59.766 40.000 0.00 0.00 0.00 4.85
452 458 5.462068 CGTCTAGATACATCCATTTTTGCGA 59.538 40.000 0.00 0.00 0.00 5.10
453 459 6.562270 CGTCTAGATACATCCATTTTTGCGAC 60.562 42.308 0.00 0.00 0.00 5.19
454 460 6.257849 GTCTAGATACATCCATTTTTGCGACA 59.742 38.462 0.00 0.00 0.00 4.35
455 461 5.895636 AGATACATCCATTTTTGCGACAA 57.104 34.783 0.00 0.00 0.00 3.18
456 462 5.883661 AGATACATCCATTTTTGCGACAAG 58.116 37.500 0.00 0.00 0.00 3.16
457 463 5.415701 AGATACATCCATTTTTGCGACAAGT 59.584 36.000 0.00 0.00 0.00 3.16
458 464 6.597672 AGATACATCCATTTTTGCGACAAGTA 59.402 34.615 0.00 0.00 0.00 2.24
459 465 5.446143 ACATCCATTTTTGCGACAAGTAA 57.554 34.783 0.00 0.00 0.00 2.24
460 466 6.024552 ACATCCATTTTTGCGACAAGTAAT 57.975 33.333 0.00 0.00 0.00 1.89
461 467 6.454795 ACATCCATTTTTGCGACAAGTAATT 58.545 32.000 0.00 0.00 0.00 1.40
462 468 6.586082 ACATCCATTTTTGCGACAAGTAATTC 59.414 34.615 0.00 0.00 0.00 2.17
463 469 5.465935 TCCATTTTTGCGACAAGTAATTCC 58.534 37.500 0.00 0.00 0.00 3.01
464 470 4.323336 CCATTTTTGCGACAAGTAATTCCG 59.677 41.667 0.00 0.00 0.00 4.30
465 471 4.815040 TTTTTGCGACAAGTAATTCCGA 57.185 36.364 0.00 0.00 0.00 4.55
466 472 4.815040 TTTTGCGACAAGTAATTCCGAA 57.185 36.364 0.00 0.00 0.00 4.30
467 473 3.799137 TTGCGACAAGTAATTCCGAAC 57.201 42.857 0.00 0.00 0.00 3.95
468 474 1.722464 TGCGACAAGTAATTCCGAACG 59.278 47.619 0.00 0.00 0.00 3.95
469 475 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44
470 476 2.598589 CGACAAGTAATTCCGAACGGA 58.401 47.619 12.04 12.04 43.52 4.69
471 477 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
472 478 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
473 479 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
474 480 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
475 481 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
476 482 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
477 483 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
644 651 5.333263 GCAACATTTTCTTTGGTTCCGATTG 60.333 40.000 0.00 0.00 0.00 2.67
645 652 5.782893 ACATTTTCTTTGGTTCCGATTGA 57.217 34.783 0.00 0.00 0.00 2.57
646 653 6.345096 ACATTTTCTTTGGTTCCGATTGAT 57.655 33.333 0.00 0.00 0.00 2.57
647 654 7.461182 ACATTTTCTTTGGTTCCGATTGATA 57.539 32.000 0.00 0.00 0.00 2.15
648 655 8.066612 ACATTTTCTTTGGTTCCGATTGATAT 57.933 30.769 0.00 0.00 0.00 1.63
649 656 7.975616 ACATTTTCTTTGGTTCCGATTGATATG 59.024 33.333 0.00 0.00 0.00 1.78
650 657 7.461182 TTTTCTTTGGTTCCGATTGATATGT 57.539 32.000 0.00 0.00 0.00 2.29
651 658 8.568676 TTTTCTTTGGTTCCGATTGATATGTA 57.431 30.769 0.00 0.00 0.00 2.29
652 659 7.786178 TTCTTTGGTTCCGATTGATATGTAG 57.214 36.000 0.00 0.00 0.00 2.74
653 660 7.119709 TCTTTGGTTCCGATTGATATGTAGA 57.880 36.000 0.00 0.00 0.00 2.59
654 661 6.984474 TCTTTGGTTCCGATTGATATGTAGAC 59.016 38.462 0.00 0.00 0.00 2.59
655 662 6.479972 TTGGTTCCGATTGATATGTAGACT 57.520 37.500 0.00 0.00 0.00 3.24
656 663 5.842907 TGGTTCCGATTGATATGTAGACTG 58.157 41.667 0.00 0.00 0.00 3.51
657 664 4.686554 GGTTCCGATTGATATGTAGACTGC 59.313 45.833 0.00 0.00 0.00 4.40
658 665 5.289595 GTTCCGATTGATATGTAGACTGCA 58.710 41.667 0.00 0.00 0.00 4.41
695 717 1.331214 CATTGGATGGCGCCCTTAAT 58.669 50.000 26.77 16.01 0.00 1.40
791 847 6.867519 TGAACTTAGTCCTTGATACATGGA 57.132 37.500 0.00 0.00 35.72 3.41
2055 2186 6.498304 TGATGAAGAGAAAGAAGTGCAAAAC 58.502 36.000 0.00 0.00 0.00 2.43
2327 2458 1.468520 CATTCGGCGTGGAGAAATTGT 59.531 47.619 6.85 0.00 0.00 2.71
2396 2527 5.843673 TCACTAGAAGACATAGCAGAAGG 57.156 43.478 0.00 0.00 0.00 3.46
2649 2783 5.131067 GTGGAAGTTAAGGTGAGGACTTTT 58.869 41.667 0.00 0.00 32.85 2.27
3522 3659 9.713713 AATGAGTTAGTTTCTTTTCCTAGACTC 57.286 33.333 0.00 0.00 0.00 3.36
3590 3772 0.618458 TTTGAGGATCCGGAAGTGGG 59.382 55.000 9.01 0.00 0.00 4.61
3789 3998 6.417044 CGGTTCTCCTTATACAGAATTGTACG 59.583 42.308 0.00 0.00 42.29 3.67
4049 4266 3.659786 TGAACACCGCATATATACTGGC 58.340 45.455 0.00 0.00 0.00 4.85
4086 4303 5.825593 TGTGTCTTTAATTCTCTGGACCT 57.174 39.130 0.00 0.00 0.00 3.85
4126 4372 4.280425 TGGATACACAAATTGCAAGCTTCA 59.720 37.500 4.94 0.00 46.17 3.02
4137 4383 5.595257 TTGCAAGCTTCATATGGCATTAA 57.405 34.783 4.78 0.00 0.00 1.40
4253 4528 6.551736 ACAAGTTATCAAGTGTTGTGTGTTC 58.448 36.000 0.00 0.00 30.25 3.18
4293 4999 7.381323 TGTGTTCCATAGTATATGCTCATCAG 58.619 38.462 0.00 0.00 0.00 2.90
4313 5032 6.152932 TCAGAACTACTACGGTTTGTTTCT 57.847 37.500 0.00 0.00 0.00 2.52
4321 5040 8.985805 ACTACTACGGTTTGTTTCTTAATTCTG 58.014 33.333 0.00 0.00 0.00 3.02
4360 5079 2.017049 GTTGGTGCAGTTCACTTCAGT 58.983 47.619 0.00 0.00 44.98 3.41
4415 5137 1.063616 CTGTCAATGCTGAAGATGCGG 59.936 52.381 0.00 0.00 31.88 5.69
4418 5140 2.162208 GTCAATGCTGAAGATGCGGAAA 59.838 45.455 0.00 0.00 31.88 3.13
4419 5141 2.421073 TCAATGCTGAAGATGCGGAAAG 59.579 45.455 0.00 0.00 0.00 2.62
4420 5142 2.119801 ATGCTGAAGATGCGGAAAGT 57.880 45.000 0.00 0.00 0.00 2.66
4421 5143 2.760634 TGCTGAAGATGCGGAAAGTA 57.239 45.000 0.00 0.00 0.00 2.24
4444 5205 3.165071 CCTATTTTTCTGTGGGCAGGTT 58.835 45.455 0.00 0.00 42.78 3.50
4520 5282 4.104261 AGGCCTTTGTTGTACTAAACCTCT 59.896 41.667 0.00 0.00 0.00 3.69
4526 5288 4.771903 TGTTGTACTAAACCTCTTGTGCA 58.228 39.130 0.00 0.00 0.00 4.57
4527 5289 4.573201 TGTTGTACTAAACCTCTTGTGCAC 59.427 41.667 10.75 10.75 0.00 4.57
4530 5298 5.433526 TGTACTAAACCTCTTGTGCACTTT 58.566 37.500 19.41 11.24 0.00 2.66
4532 5300 7.221450 TGTACTAAACCTCTTGTGCACTTTAT 58.779 34.615 19.41 6.37 0.00 1.40
4541 5309 3.907894 TGTGCACTTTATTTTCCGACC 57.092 42.857 19.41 0.00 0.00 4.79
4558 5337 4.213906 TCCGACCAGTTCCGTTTTATTTTC 59.786 41.667 0.00 0.00 0.00 2.29
4575 5356 0.110486 TTCCCTGAACTTGAGGCCAC 59.890 55.000 5.01 0.00 0.00 5.01
4588 5369 2.575461 GCCACAGGCCTTTGATGC 59.425 61.111 20.80 12.12 44.06 3.91
4851 7065 4.125703 GCATTATCAGAAGGACTGTCTGG 58.874 47.826 7.85 0.00 45.86 3.86
4915 7130 3.495331 TGGTTGTTGCCATACTGACATT 58.505 40.909 0.00 0.00 32.81 2.71
4920 7135 2.489329 GTTGCCATACTGACATTGCTGT 59.511 45.455 0.00 0.00 38.67 4.40
4940 7155 2.988010 AGAGTGCAGACTGAACACAA 57.012 45.000 16.19 0.00 36.76 3.33
4954 7169 2.516486 CACAACGACGAGATGTGCA 58.484 52.632 15.90 0.00 44.59 4.57
4980 7195 2.611800 TGGAGGTGGATGCTGCCT 60.612 61.111 0.00 1.01 34.93 4.75
4981 7196 2.124403 GGAGGTGGATGCTGCCTG 60.124 66.667 5.73 0.00 31.89 4.85
4982 7197 2.827642 GAGGTGGATGCTGCCTGC 60.828 66.667 5.73 0.00 43.25 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
108 114 1.024271 GTGAACAAGAAGCAGTGCCA 58.976 50.000 12.58 0.00 0.00 4.92
373 379 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
374 380 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
375 381 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
376 382 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
377 383 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
378 384 3.671433 CGAGACAAGTAATTCCGAACGGA 60.671 47.826 12.04 12.04 43.52 4.69
379 385 2.597305 CGAGACAAGTAATTCCGAACGG 59.403 50.000 6.94 6.94 0.00 4.44
380 386 2.597305 CCGAGACAAGTAATTCCGAACG 59.403 50.000 0.00 0.00 0.00 3.95
381 387 3.841643 TCCGAGACAAGTAATTCCGAAC 58.158 45.455 0.00 0.00 0.00 3.95
382 388 4.524316 TTCCGAGACAAGTAATTCCGAA 57.476 40.909 0.00 0.00 0.00 4.30
383 389 4.524316 TTTCCGAGACAAGTAATTCCGA 57.476 40.909 0.00 0.00 0.00 4.55
384 390 4.034048 CCATTTCCGAGACAAGTAATTCCG 59.966 45.833 0.00 0.00 0.00 4.30
385 391 5.183228 TCCATTTCCGAGACAAGTAATTCC 58.817 41.667 0.00 0.00 0.00 3.01
386 392 6.316390 ACATCCATTTCCGAGACAAGTAATTC 59.684 38.462 0.00 0.00 0.00 2.17
387 393 6.180472 ACATCCATTTCCGAGACAAGTAATT 58.820 36.000 0.00 0.00 0.00 1.40
388 394 5.745227 ACATCCATTTCCGAGACAAGTAAT 58.255 37.500 0.00 0.00 0.00 1.89
389 395 5.160607 ACATCCATTTCCGAGACAAGTAA 57.839 39.130 0.00 0.00 0.00 2.24
390 396 4.819105 ACATCCATTTCCGAGACAAGTA 57.181 40.909 0.00 0.00 0.00 2.24
391 397 3.703001 ACATCCATTTCCGAGACAAGT 57.297 42.857 0.00 0.00 0.00 3.16
392 398 5.605534 AGATACATCCATTTCCGAGACAAG 58.394 41.667 0.00 0.00 0.00 3.16
393 399 5.614324 AGATACATCCATTTCCGAGACAA 57.386 39.130 0.00 0.00 0.00 3.18
394 400 6.068670 TCTAGATACATCCATTTCCGAGACA 58.931 40.000 0.00 0.00 0.00 3.41
395 401 6.576662 TCTAGATACATCCATTTCCGAGAC 57.423 41.667 0.00 0.00 0.00 3.36
396 402 6.778069 AGTTCTAGATACATCCATTTCCGAGA 59.222 38.462 0.00 0.00 0.00 4.04
397 403 6.987386 AGTTCTAGATACATCCATTTCCGAG 58.013 40.000 0.00 0.00 0.00 4.63
398 404 6.978674 AGTTCTAGATACATCCATTTCCGA 57.021 37.500 0.00 0.00 0.00 4.55
399 405 9.542462 TTTTAGTTCTAGATACATCCATTTCCG 57.458 33.333 0.00 0.00 0.00 4.30
403 409 9.751542 CGTCTTTTAGTTCTAGATACATCCATT 57.248 33.333 0.00 0.00 0.00 3.16
404 410 8.915036 ACGTCTTTTAGTTCTAGATACATCCAT 58.085 33.333 0.00 0.00 0.00 3.41
405 411 8.289939 ACGTCTTTTAGTTCTAGATACATCCA 57.710 34.615 0.00 0.00 0.00 3.41
406 412 8.623030 AGACGTCTTTTAGTTCTAGATACATCC 58.377 37.037 13.58 0.00 0.00 3.51
409 415 9.881649 TCTAGACGTCTTTTAGTTCTAGATACA 57.118 33.333 25.44 0.00 32.48 2.29
413 419 9.881649 TGTATCTAGACGTCTTTTAGTTCTAGA 57.118 33.333 25.44 16.65 38.94 2.43
416 422 8.623030 GGATGTATCTAGACGTCTTTTAGTTCT 58.377 37.037 25.44 7.33 35.93 3.01
417 423 8.404000 TGGATGTATCTAGACGTCTTTTAGTTC 58.596 37.037 25.44 12.44 35.93 3.01
418 424 8.289939 TGGATGTATCTAGACGTCTTTTAGTT 57.710 34.615 25.44 12.44 35.93 2.24
419 425 7.876936 TGGATGTATCTAGACGTCTTTTAGT 57.123 36.000 25.44 8.46 35.93 2.24
420 426 9.751542 AAATGGATGTATCTAGACGTCTTTTAG 57.248 33.333 25.44 15.41 35.93 1.85
422 428 9.449719 AAAAATGGATGTATCTAGACGTCTTTT 57.550 29.630 25.44 10.33 35.93 2.27
423 429 8.883731 CAAAAATGGATGTATCTAGACGTCTTT 58.116 33.333 25.44 11.68 35.93 2.52
424 430 7.011482 GCAAAAATGGATGTATCTAGACGTCTT 59.989 37.037 25.44 8.59 35.93 3.01
425 431 6.480320 GCAAAAATGGATGTATCTAGACGTCT 59.520 38.462 23.66 23.66 35.93 4.18
426 432 6.562270 CGCAAAAATGGATGTATCTAGACGTC 60.562 42.308 7.70 7.70 35.04 4.34
427 433 5.234329 CGCAAAAATGGATGTATCTAGACGT 59.766 40.000 0.00 0.00 0.00 4.34
428 434 5.462068 TCGCAAAAATGGATGTATCTAGACG 59.538 40.000 0.00 0.00 0.00 4.18
429 435 6.257849 TGTCGCAAAAATGGATGTATCTAGAC 59.742 38.462 0.00 0.00 0.00 2.59
430 436 6.345298 TGTCGCAAAAATGGATGTATCTAGA 58.655 36.000 0.00 0.00 0.00 2.43
431 437 6.603237 TGTCGCAAAAATGGATGTATCTAG 57.397 37.500 0.00 0.00 0.00 2.43
432 438 6.597672 ACTTGTCGCAAAAATGGATGTATCTA 59.402 34.615 0.00 0.00 0.00 1.98
433 439 5.415701 ACTTGTCGCAAAAATGGATGTATCT 59.584 36.000 0.00 0.00 0.00 1.98
434 440 5.640732 ACTTGTCGCAAAAATGGATGTATC 58.359 37.500 0.00 0.00 0.00 2.24
435 441 5.643379 ACTTGTCGCAAAAATGGATGTAT 57.357 34.783 0.00 0.00 0.00 2.29
436 442 6.561737 TTACTTGTCGCAAAAATGGATGTA 57.438 33.333 0.00 0.00 0.00 2.29
437 443 5.446143 TTACTTGTCGCAAAAATGGATGT 57.554 34.783 0.00 0.00 0.00 3.06
438 444 6.034898 GGAATTACTTGTCGCAAAAATGGATG 59.965 38.462 0.00 0.00 0.00 3.51
439 445 6.099341 GGAATTACTTGTCGCAAAAATGGAT 58.901 36.000 0.00 0.00 0.00 3.41
440 446 5.465935 GGAATTACTTGTCGCAAAAATGGA 58.534 37.500 0.00 0.00 0.00 3.41
441 447 4.323336 CGGAATTACTTGTCGCAAAAATGG 59.677 41.667 0.00 0.00 0.00 3.16
442 448 5.150683 TCGGAATTACTTGTCGCAAAAATG 58.849 37.500 0.00 0.00 0.00 2.32
443 449 5.365403 TCGGAATTACTTGTCGCAAAAAT 57.635 34.783 0.00 0.00 0.00 1.82
444 450 4.815040 TCGGAATTACTTGTCGCAAAAA 57.185 36.364 0.00 0.00 0.00 1.94
445 451 4.529446 GTTCGGAATTACTTGTCGCAAAA 58.471 39.130 0.00 0.00 0.00 2.44
446 452 3.363182 CGTTCGGAATTACTTGTCGCAAA 60.363 43.478 0.00 0.00 0.00 3.68
447 453 2.156117 CGTTCGGAATTACTTGTCGCAA 59.844 45.455 0.00 0.00 0.00 4.85
448 454 1.722464 CGTTCGGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
449 455 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.00 0.00 5.19
450 456 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
451 457 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
452 458 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
453 459 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
454 460 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
455 461 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
456 462 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
457 463 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
458 464 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
459 465 1.341778 ACTACTCCCTCCGTTCGGAAT 60.342 52.381 14.79 2.09 33.41 3.01
460 466 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
461 467 0.038744 AACTACTCCCTCCGTTCGGA 59.961 55.000 13.34 13.34 0.00 4.55
462 468 1.755179 TAACTACTCCCTCCGTTCGG 58.245 55.000 4.74 4.74 0.00 4.30
463 469 2.947652 TGATAACTACTCCCTCCGTTCG 59.052 50.000 0.00 0.00 0.00 3.95
464 470 4.643784 TCTTGATAACTACTCCCTCCGTTC 59.356 45.833 0.00 0.00 0.00 3.95
465 471 4.607239 TCTTGATAACTACTCCCTCCGTT 58.393 43.478 0.00 0.00 0.00 4.44
466 472 4.246712 TCTTGATAACTACTCCCTCCGT 57.753 45.455 0.00 0.00 0.00 4.69
467 473 5.793030 AATCTTGATAACTACTCCCTCCG 57.207 43.478 0.00 0.00 0.00 4.63
468 474 7.368198 AGAAATCTTGATAACTACTCCCTCC 57.632 40.000 0.00 0.00 0.00 4.30
469 475 8.581578 CCTAGAAATCTTGATAACTACTCCCTC 58.418 40.741 0.00 0.00 0.00 4.30
470 476 7.015779 GCCTAGAAATCTTGATAACTACTCCCT 59.984 40.741 0.00 0.00 0.00 4.20
471 477 7.015779 AGCCTAGAAATCTTGATAACTACTCCC 59.984 40.741 0.00 0.00 0.00 4.30
472 478 7.958088 AGCCTAGAAATCTTGATAACTACTCC 58.042 38.462 0.00 0.00 0.00 3.85
474 480 8.581578 GCTAGCCTAGAAATCTTGATAACTACT 58.418 37.037 2.29 0.00 0.00 2.57
475 481 8.361139 TGCTAGCCTAGAAATCTTGATAACTAC 58.639 37.037 13.29 0.00 0.00 2.73
476 482 8.361139 GTGCTAGCCTAGAAATCTTGATAACTA 58.639 37.037 13.29 0.00 0.00 2.24
477 483 7.070571 AGTGCTAGCCTAGAAATCTTGATAACT 59.929 37.037 13.29 0.00 0.00 2.24
542 549 5.894298 ACACCTAGATTAATCATCCAGCA 57.106 39.130 17.56 0.00 31.20 4.41
791 847 4.899352 AGATTCAGCACCTTGAGTAGTT 57.101 40.909 0.00 0.00 0.00 2.24
1441 1564 2.719531 TTTCCAGCAGGTTGTGTACA 57.280 45.000 0.00 0.00 35.89 2.90
2055 2186 5.023533 TCTCAATCCCGATGTTTCTTAGG 57.976 43.478 0.00 0.00 0.00 2.69
2327 2458 2.421388 CCTTCAGCAATCCATAACCGGA 60.421 50.000 9.46 0.00 40.07 5.14
2396 2527 6.151312 TCGATGGATTAGCTCATAGAAGTACC 59.849 42.308 0.00 0.00 0.00 3.34
2649 2783 3.070878 TCTGTGCACCATGAACACTTAGA 59.929 43.478 15.69 2.54 35.33 2.10
3590 3772 0.037975 CAACCTTGCAGAATGGGCAC 60.038 55.000 0.00 0.00 41.75 5.01
3789 3998 2.496899 TGGAAATCAACTCCAGGCTC 57.503 50.000 0.00 0.00 38.07 4.70
4049 4266 6.966435 AAAGACACAAAACAAAATGTCCAG 57.034 33.333 0.00 0.00 41.99 3.86
4086 4303 7.345653 TGTGTATCCAATGGGGCATAAAATTAA 59.654 33.333 0.00 0.00 36.21 1.40
4137 4383 2.048444 AGCATTTCTGGTGCATCGAT 57.952 45.000 0.00 0.00 44.87 3.59
4253 4528 5.245531 TGGAACACATAAGCAACTTAGAGG 58.754 41.667 0.00 0.00 29.02 3.69
4293 4999 9.803130 GAATTAAGAAACAAACCGTAGTAGTTC 57.197 33.333 0.00 0.00 0.00 3.01
4321 5040 7.148407 GCACCAACAGTCCAGCATATATATAAC 60.148 40.741 0.00 0.00 0.00 1.89
4327 5046 2.238395 TGCACCAACAGTCCAGCATATA 59.762 45.455 0.00 0.00 0.00 0.86
4360 5079 1.078891 ATGTCCCATGCTTTGCCCA 59.921 52.632 0.00 0.00 0.00 5.36
4444 5205 4.839121 ACGCAATACAGTATTTGAAGGGA 58.161 39.130 2.77 0.00 0.00 4.20
4506 5268 5.031066 AGTGCACAAGAGGTTTAGTACAA 57.969 39.130 21.04 0.00 0.00 2.41
4520 5282 3.632604 TGGTCGGAAAATAAAGTGCACAA 59.367 39.130 21.04 4.13 0.00 3.33
4526 5288 3.749609 CGGAACTGGTCGGAAAATAAAGT 59.250 43.478 0.00 0.00 0.00 2.66
4527 5289 3.749609 ACGGAACTGGTCGGAAAATAAAG 59.250 43.478 7.31 0.00 0.00 1.85
4530 5298 3.405823 AACGGAACTGGTCGGAAAATA 57.594 42.857 7.31 0.00 0.00 1.40
4532 5300 2.041251 AAACGGAACTGGTCGGAAAA 57.959 45.000 7.31 0.00 0.00 2.29
4541 5309 5.699097 TCAGGGAAAATAAAACGGAACTG 57.301 39.130 0.00 0.00 0.00 3.16
4558 5337 0.607489 CTGTGGCCTCAAGTTCAGGG 60.607 60.000 9.14 0.00 0.00 4.45
4575 5356 1.068055 GTTCAGTGCATCAAAGGCCTG 60.068 52.381 5.69 0.00 33.58 4.85
4588 5369 2.363680 ACTGTGTCTCTCAGGTTCAGTG 59.636 50.000 0.00 0.00 37.25 3.66
4851 7065 8.552083 AAATTATTTTTGGTCCTGATTTCAGC 57.448 30.769 1.90 0.00 42.47 4.26
4915 7130 1.620822 TCAGTCTGCACTCTACAGCA 58.379 50.000 0.00 0.00 39.25 4.41
4920 7135 3.717707 GTTGTGTTCAGTCTGCACTCTA 58.282 45.455 4.25 0.00 34.52 2.43
4940 7155 0.664466 CACTGTGCACATCTCGTCGT 60.664 55.000 22.00 10.03 0.00 4.34
4954 7169 3.941188 CCACCTCCACCGCACTGT 61.941 66.667 0.00 0.00 0.00 3.55
4982 7197 4.827087 AGCGCTCCGGCACATCTG 62.827 66.667 2.64 0.00 38.60 2.90
4983 7198 4.827087 CAGCGCTCCGGCACATCT 62.827 66.667 7.13 0.00 38.60 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.