Multiple sequence alignment - TraesCS3B01G081800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G081800 chr3B 100.000 5754 0 0 1 5754 51819024 51813271 0.000000e+00 10626.0
1 TraesCS3B01G081800 chr3B 92.986 2324 95 23 2615 4902 52771117 52773408 0.000000e+00 3326.0
2 TraesCS3B01G081800 chr3B 86.949 613 58 12 1 597 52769906 52770512 0.000000e+00 669.0
3 TraesCS3B01G081800 chr3B 92.704 466 23 4 957 1411 52770651 52771116 0.000000e+00 662.0
4 TraesCS3B01G081800 chr3D 94.549 1651 62 9 3453 5083 30237163 30235521 0.000000e+00 2525.0
5 TraesCS3B01G081800 chr3D 90.795 1032 75 7 2429 3456 30238206 30237191 0.000000e+00 1362.0
6 TraesCS3B01G081800 chr3D 93.509 570 31 4 957 1523 30239621 30239055 0.000000e+00 843.0
7 TraesCS3B01G081800 chr3D 90.156 640 43 13 1 626 30240357 30239724 0.000000e+00 815.0
8 TraesCS3B01G081800 chr3D 83.113 758 106 11 1522 2261 30238950 30238197 0.000000e+00 671.0
9 TraesCS3B01G081800 chr3D 93.281 253 16 1 626 877 563449185 563448933 7.040000e-99 372.0
10 TraesCS3B01G081800 chr3D 92.337 261 17 3 620 877 269465759 269465499 9.110000e-98 368.0
11 TraesCS3B01G081800 chr3D 78.333 540 108 5 1564 2096 522203344 522202807 1.990000e-89 340.0
12 TraesCS3B01G081800 chr3D 82.319 345 50 9 1549 1883 437737273 437737616 7.290000e-74 289.0
13 TraesCS3B01G081800 chr3D 78.912 441 75 11 1550 1975 476366377 476366814 3.390000e-72 283.0
14 TraesCS3B01G081800 chr3D 94.595 37 1 1 2664 2700 30238038 30238003 8.050000e-04 56.5
15 TraesCS3B01G081800 chr3A 96.277 1370 44 4 3453 4819 41992180 41990815 0.000000e+00 2241.0
16 TraesCS3B01G081800 chr3A 94.660 1030 43 8 2431 3456 41993229 41992208 0.000000e+00 1587.0
17 TraesCS3B01G081800 chr3A 87.576 982 94 10 1294 2261 41994189 41993222 0.000000e+00 1112.0
18 TraesCS3B01G081800 chr3A 90.507 611 37 12 1 597 41999462 41998859 0.000000e+00 787.0
19 TraesCS3B01G081800 chr3A 94.038 520 20 3 5074 5588 589836668 589836155 0.000000e+00 778.0
20 TraesCS3B01G081800 chr3A 88.663 344 21 9 957 1300 41998648 41998323 2.500000e-108 403.0
21 TraesCS3B01G081800 chr3A 82.178 101 15 3 2516 2615 363589228 363589326 3.690000e-12 84.2
22 TraesCS3B01G081800 chr4A 87.434 1512 132 28 3535 5031 385781534 385780066 0.000000e+00 1687.0
23 TraesCS3B01G081800 chr4A 82.075 530 83 6 1553 2073 72971930 72972456 5.290000e-120 442.0
24 TraesCS3B01G081800 chr4A 93.436 259 15 2 619 875 615435022 615435280 3.250000e-102 383.0
25 TraesCS3B01G081800 chr4B 89.833 777 71 5 3519 4292 207124213 207123442 0.000000e+00 990.0
26 TraesCS3B01G081800 chr4B 87.500 280 24 3 2798 3068 207125365 207125088 4.330000e-81 313.0
27 TraesCS3B01G081800 chr4B 92.558 215 14 2 4274 4487 207118981 207118768 2.010000e-79 307.0
28 TraesCS3B01G081800 chr4B 98.214 168 3 0 5587 5754 407417519 407417686 1.570000e-75 294.0
29 TraesCS3B01G081800 chr4B 86.286 175 18 3 2262 2431 132318652 132318825 9.850000e-43 185.0
30 TraesCS3B01G081800 chr4B 84.892 139 11 6 3395 3528 207124380 207124247 1.300000e-26 132.0
31 TraesCS3B01G081800 chr4B 84.000 100 16 0 2516 2615 568872608 568872509 4.750000e-16 97.1
32 TraesCS3B01G081800 chr4D 89.831 649 56 7 3895 4539 164905028 164904386 0.000000e+00 824.0
33 TraesCS3B01G081800 chr4D 93.676 253 13 3 619 869 24775860 24775609 5.440000e-100 375.0
34 TraesCS3B01G081800 chr4D 93.522 247 15 1 626 871 502551002 502551248 3.280000e-97 366.0
35 TraesCS3B01G081800 chr4D 91.698 265 18 4 611 873 488271077 488271339 1.180000e-96 364.0
36 TraesCS3B01G081800 chr4D 87.745 204 21 3 4541 4744 164888427 164888228 9.640000e-58 235.0
37 TraesCS3B01G081800 chr7B 95.108 511 14 3 5083 5588 81415343 81414839 0.000000e+00 795.0
38 TraesCS3B01G081800 chr7B 97.159 176 4 1 5580 5754 699405938 699406113 4.360000e-76 296.0
39 TraesCS3B01G081800 chr7B 96.571 175 6 0 5580 5754 115216286 115216460 2.030000e-74 291.0
40 TraesCS3B01G081800 chr7B 89.412 170 17 1 2262 2431 610628843 610629011 4.520000e-51 213.0
41 TraesCS3B01G081800 chr6A 93.933 511 20 3 5083 5588 603078269 603077765 0.000000e+00 761.0
42 TraesCS3B01G081800 chr6A 83.019 106 14 4 2511 2615 290458669 290458567 6.140000e-15 93.5
43 TraesCS3B01G081800 chr5A 93.933 511 19 4 5083 5588 37141845 37142348 0.000000e+00 761.0
44 TraesCS3B01G081800 chr5A 93.542 511 22 3 5083 5588 640922685 640922181 0.000000e+00 750.0
45 TraesCS3B01G081800 chr5A 87.698 504 46 7 5092 5588 43774159 43773665 1.800000e-159 573.0
46 TraesCS3B01G081800 chr5A 81.711 339 50 6 1549 1875 636299043 636298705 7.350000e-69 272.0
47 TraesCS3B01G081800 chr5D 93.243 518 20 5 5076 5588 148230765 148231272 0.000000e+00 749.0
48 TraesCS3B01G081800 chr2A 93.346 511 23 3 5083 5588 142702831 142702327 0.000000e+00 745.0
49 TraesCS3B01G081800 chr2A 94.737 171 7 2 2262 2431 672442212 672442043 1.230000e-66 265.0
50 TraesCS3B01G081800 chr7A 92.955 511 25 3 5083 5588 461927629 461928133 0.000000e+00 734.0
51 TraesCS3B01G081800 chr7A 83.810 105 17 0 2326 2430 21350133 21350237 3.670000e-17 100.0
52 TraesCS3B01G081800 chr7A 83.505 97 16 0 2519 2615 115238977 115239073 2.210000e-14 91.6
53 TraesCS3B01G081800 chr6B 79.204 553 101 11 1552 2094 45547003 45546455 7.040000e-99 372.0
54 TraesCS3B01G081800 chr6B 96.571 175 6 0 5580 5754 256140561 256140735 2.030000e-74 291.0
55 TraesCS3B01G081800 chr2D 93.574 249 15 1 627 874 541547288 541547536 2.530000e-98 370.0
56 TraesCS3B01G081800 chr2D 92.188 256 18 2 615 868 608802844 608803099 1.520000e-95 361.0
57 TraesCS3B01G081800 chr2D 91.228 114 10 0 2318 2431 16012155 16012042 7.720000e-34 156.0
58 TraesCS3B01G081800 chr2D 84.158 101 13 3 2514 2613 193335103 193335201 1.710000e-15 95.3
59 TraesCS3B01G081800 chr6D 93.574 249 13 3 628 874 450269333 450269580 9.110000e-98 368.0
60 TraesCS3B01G081800 chr6D 75.398 565 104 22 1549 2101 451861048 451860507 2.070000e-59 241.0
61 TraesCS3B01G081800 chr2B 78.676 544 104 8 1562 2097 799282490 799281951 9.170000e-93 351.0
62 TraesCS3B01G081800 chr2B 96.023 176 6 1 5579 5754 38724506 38724332 9.440000e-73 285.0
63 TraesCS3B01G081800 chr2B 90.643 171 13 2 2261 2431 471637317 471637484 2.090000e-54 224.0
64 TraesCS3B01G081800 chr2B 80.000 300 55 3 1803 2101 474350234 474349939 3.490000e-52 217.0
65 TraesCS3B01G081800 chr2B 82.524 103 15 3 2514 2615 249454897 249454997 2.860000e-13 87.9
66 TraesCS3B01G081800 chr7D 82.116 397 62 6 1550 1937 170560389 170560785 1.200000e-86 331.0
67 TraesCS3B01G081800 chr7D 85.263 95 13 1 2511 2605 96078614 96078521 4.750000e-16 97.1
68 TraesCS3B01G081800 chr1B 98.817 169 2 0 5586 5754 553834586 553834754 9.370000e-78 302.0
69 TraesCS3B01G081800 chr1B 97.661 171 4 0 5584 5754 620382420 620382250 1.570000e-75 294.0
70 TraesCS3B01G081800 chr1B 96.591 176 6 0 5579 5754 492678727 492678902 5.640000e-75 292.0
71 TraesCS3B01G081800 chr1B 97.633 169 4 0 5586 5754 145269171 145269003 2.030000e-74 291.0
72 TraesCS3B01G081800 chr1D 89.349 169 15 3 2261 2429 415558465 415558300 5.840000e-50 209.0
73 TraesCS3B01G081800 chr1A 81.111 180 23 8 2262 2430 402234244 402234423 3.620000e-27 134.0
74 TraesCS3B01G081800 chr1A 85.106 94 13 1 2519 2612 14235734 14235826 1.710000e-15 95.3
75 TraesCS3B01G081800 chr1A 83.505 97 16 0 2519 2615 377423888 377423792 2.210000e-14 91.6
76 TraesCS3B01G081800 chr5B 86.957 69 8 1 2362 2430 87490971 87490904 6.180000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G081800 chr3B 51813271 51819024 5753 True 10626.000000 10626 100.000000 1 5754 1 chr3B.!!$R1 5753
1 TraesCS3B01G081800 chr3B 52769906 52773408 3502 False 1552.333333 3326 90.879667 1 4902 3 chr3B.!!$F1 4901
2 TraesCS3B01G081800 chr3D 30235521 30240357 4836 True 1045.416667 2525 91.119500 1 5083 6 chr3D.!!$R4 5082
3 TraesCS3B01G081800 chr3D 522202807 522203344 537 True 340.000000 340 78.333000 1564 2096 1 chr3D.!!$R2 532
4 TraesCS3B01G081800 chr3A 41990815 41994189 3374 True 1646.666667 2241 92.837667 1294 4819 3 chr3A.!!$R2 3525
5 TraesCS3B01G081800 chr3A 589836155 589836668 513 True 778.000000 778 94.038000 5074 5588 1 chr3A.!!$R1 514
6 TraesCS3B01G081800 chr3A 41998323 41999462 1139 True 595.000000 787 89.585000 1 1300 2 chr3A.!!$R3 1299
7 TraesCS3B01G081800 chr4A 385780066 385781534 1468 True 1687.000000 1687 87.434000 3535 5031 1 chr4A.!!$R1 1496
8 TraesCS3B01G081800 chr4A 72971930 72972456 526 False 442.000000 442 82.075000 1553 2073 1 chr4A.!!$F1 520
9 TraesCS3B01G081800 chr4B 207123442 207125365 1923 True 478.333333 990 87.408333 2798 4292 3 chr4B.!!$R3 1494
10 TraesCS3B01G081800 chr4D 164904386 164905028 642 True 824.000000 824 89.831000 3895 4539 1 chr4D.!!$R3 644
11 TraesCS3B01G081800 chr7B 81414839 81415343 504 True 795.000000 795 95.108000 5083 5588 1 chr7B.!!$R1 505
12 TraesCS3B01G081800 chr6A 603077765 603078269 504 True 761.000000 761 93.933000 5083 5588 1 chr6A.!!$R2 505
13 TraesCS3B01G081800 chr5A 37141845 37142348 503 False 761.000000 761 93.933000 5083 5588 1 chr5A.!!$F1 505
14 TraesCS3B01G081800 chr5A 640922181 640922685 504 True 750.000000 750 93.542000 5083 5588 1 chr5A.!!$R3 505
15 TraesCS3B01G081800 chr5D 148230765 148231272 507 False 749.000000 749 93.243000 5076 5588 1 chr5D.!!$F1 512
16 TraesCS3B01G081800 chr2A 142702327 142702831 504 True 745.000000 745 93.346000 5083 5588 1 chr2A.!!$R1 505
17 TraesCS3B01G081800 chr7A 461927629 461928133 504 False 734.000000 734 92.955000 5083 5588 1 chr7A.!!$F3 505
18 TraesCS3B01G081800 chr6B 45546455 45547003 548 True 372.000000 372 79.204000 1552 2094 1 chr6B.!!$R1 542
19 TraesCS3B01G081800 chr6D 451860507 451861048 541 True 241.000000 241 75.398000 1549 2101 1 chr6D.!!$R1 552
20 TraesCS3B01G081800 chr2B 799281951 799282490 539 True 351.000000 351 78.676000 1562 2097 1 chr2B.!!$R3 535

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
787 862 0.721718 GCGCTCGACATTAAAGCAGT 59.278 50.0 0.00 0.00 35.76 4.40 F
2271 2536 0.036010 ACTTGAATCCAGTGGCGGAG 60.036 55.0 3.51 0.48 38.83 4.63 F
2308 2573 0.179029 GGCGGGCCAGCTAAGATAAA 60.179 55.0 27.28 0.00 37.29 1.40 F
2422 2687 0.321298 TTTTGCCCAGTCGTAGCTCC 60.321 55.0 0.00 0.00 0.00 4.70 F
2435 2700 1.826340 TAGCTCCGCCACTGCTTGAA 61.826 55.0 0.00 0.00 38.15 2.69 F
2437 2702 1.986575 GCTCCGCCACTGCTTGAATC 61.987 60.0 0.00 0.00 34.43 2.52 F
4467 5296 2.052782 AATCATCCGCAGGGTTTACC 57.947 50.0 0.00 0.00 39.56 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2289 2554 0.179029 TTTATCTTAGCTGGCCCGCC 60.179 55.000 16.38 0.00 0.00 6.13 R
3632 4433 2.092968 AGTTGAGGTCACAAGCTTGTCA 60.093 45.455 28.97 19.89 39.91 3.58 R
3774 4576 2.349590 TGATGGTTTGATCAGCTCGTG 58.650 47.619 0.00 0.00 0.00 4.35 R
4336 5161 3.876320 GCCTTTTGGATCTCTAGCTTCAG 59.124 47.826 0.00 0.00 44.07 3.02 R
4467 5296 5.764686 TGGTTCATAAGGATCATCAATTCCG 59.235 40.000 0.00 0.00 37.10 4.30 R
4593 5422 8.439971 TGAATACCCATCATTATTGAACTAGCT 58.560 33.333 0.00 0.00 34.96 3.32 R
5653 6509 0.030504 CAAACGAGTGGTGCAATGCA 59.969 50.000 2.72 2.72 35.60 3.96 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 6.313905 GCTTACATATATCATAGGGCACACAC 59.686 42.308 0.00 0.00 0.00 3.82
46 47 5.835113 ATATCATAGGGCACACACAAAAC 57.165 39.130 0.00 0.00 0.00 2.43
137 143 6.786967 AGAGCAATGCCTTTTCATTTAGAT 57.213 33.333 0.00 0.00 34.68 1.98
155 162 8.781196 CATTTAGATGAATAGAGGGTTCATGTG 58.219 37.037 6.12 0.00 44.10 3.21
242 250 1.005228 TTAGGAAGAGTCGAGGGGGA 58.995 55.000 0.00 0.00 0.00 4.81
264 272 9.588096 GGGGATAATTGAGGTTAATATGTCTTT 57.412 33.333 0.00 0.00 0.00 2.52
299 307 3.313249 CGCCATCTCAATGCATGTAAGAA 59.687 43.478 0.00 0.00 0.00 2.52
300 308 4.023450 CGCCATCTCAATGCATGTAAGAAT 60.023 41.667 0.00 0.00 0.00 2.40
303 311 6.436261 CCATCTCAATGCATGTAAGAATGAC 58.564 40.000 0.00 0.00 0.00 3.06
356 364 4.905429 TCCAAATGTTCTCGATCAGGAAA 58.095 39.130 0.00 0.00 0.00 3.13
364 372 4.645762 TCTCGATCAGGAAATCAGACAG 57.354 45.455 0.00 0.00 0.00 3.51
389 397 2.192263 GATGAGGGTGGGTTTCTCTCT 58.808 52.381 0.00 0.00 0.00 3.10
448 456 4.509616 CCACGGGTCATAAACATCTAACA 58.490 43.478 0.00 0.00 0.00 2.41
452 460 7.042051 CCACGGGTCATAAACATCTAACATAAG 60.042 40.741 0.00 0.00 0.00 1.73
529 543 6.495706 GGGTCAGATTTAATCAAAACGATCC 58.504 40.000 7.74 2.18 31.11 3.36
626 701 4.398044 CCCGAAATGTGGTAGTTTTATGCT 59.602 41.667 0.00 0.00 0.00 3.79
627 702 5.587043 CCCGAAATGTGGTAGTTTTATGCTA 59.413 40.000 0.00 0.00 0.00 3.49
628 703 6.457799 CCCGAAATGTGGTAGTTTTATGCTAC 60.458 42.308 0.00 0.00 38.38 3.58
629 704 6.315393 CCGAAATGTGGTAGTTTTATGCTACT 59.685 38.462 0.00 0.00 38.92 2.57
630 705 7.493320 CCGAAATGTGGTAGTTTTATGCTACTA 59.507 37.037 0.00 0.00 38.92 1.82
631 706 8.540492 CGAAATGTGGTAGTTTTATGCTACTAG 58.460 37.037 0.00 0.00 38.92 2.57
632 707 9.379791 GAAATGTGGTAGTTTTATGCTACTAGT 57.620 33.333 0.00 0.00 38.92 2.57
633 708 8.943909 AATGTGGTAGTTTTATGCTACTAGTC 57.056 34.615 0.00 0.00 38.92 2.59
634 709 7.470935 TGTGGTAGTTTTATGCTACTAGTCA 57.529 36.000 0.00 0.00 38.92 3.41
635 710 7.898918 TGTGGTAGTTTTATGCTACTAGTCAA 58.101 34.615 0.00 0.00 38.92 3.18
636 711 8.537016 TGTGGTAGTTTTATGCTACTAGTCAAT 58.463 33.333 0.00 0.00 38.92 2.57
637 712 8.818057 GTGGTAGTTTTATGCTACTAGTCAATG 58.182 37.037 0.00 0.00 38.92 2.82
638 713 8.537016 TGGTAGTTTTATGCTACTAGTCAATGT 58.463 33.333 0.00 0.00 38.92 2.71
639 714 8.818057 GGTAGTTTTATGCTACTAGTCAATGTG 58.182 37.037 0.00 0.00 38.92 3.21
640 715 9.367444 GTAGTTTTATGCTACTAGTCAATGTGT 57.633 33.333 0.00 0.00 36.72 3.72
642 717 9.367444 AGTTTTATGCTACTAGTCAATGTGTAC 57.633 33.333 0.00 0.00 0.00 2.90
643 718 7.980742 TTTATGCTACTAGTCAATGTGTACG 57.019 36.000 0.00 0.00 0.00 3.67
644 719 5.578005 ATGCTACTAGTCAATGTGTACGT 57.422 39.130 0.00 0.00 0.00 3.57
645 720 4.729595 TGCTACTAGTCAATGTGTACGTG 58.270 43.478 0.00 0.00 0.00 4.49
646 721 3.546670 GCTACTAGTCAATGTGTACGTGC 59.453 47.826 0.00 0.00 0.00 5.34
647 722 3.653539 ACTAGTCAATGTGTACGTGCA 57.346 42.857 0.82 0.82 0.00 4.57
648 723 3.985008 ACTAGTCAATGTGTACGTGCAA 58.015 40.909 8.25 0.00 0.00 4.08
649 724 4.566004 ACTAGTCAATGTGTACGTGCAAT 58.434 39.130 8.25 1.77 0.00 3.56
650 725 3.811722 AGTCAATGTGTACGTGCAATG 57.188 42.857 8.25 8.35 0.00 2.82
651 726 2.095768 AGTCAATGTGTACGTGCAATGC 60.096 45.455 8.25 0.00 0.00 3.56
652 727 1.876156 TCAATGTGTACGTGCAATGCA 59.124 42.857 8.25 2.72 35.60 3.96
667 742 6.007936 TGCAATGCACGTTAATTTAGAAGT 57.992 33.333 2.72 0.00 31.71 3.01
668 743 7.135089 TGCAATGCACGTTAATTTAGAAGTA 57.865 32.000 2.72 0.00 31.71 2.24
669 744 7.757526 TGCAATGCACGTTAATTTAGAAGTAT 58.242 30.769 2.72 0.00 31.71 2.12
670 745 8.884726 TGCAATGCACGTTAATTTAGAAGTATA 58.115 29.630 2.72 0.00 31.71 1.47
671 746 9.878599 GCAATGCACGTTAATTTAGAAGTATAT 57.121 29.630 0.00 0.00 0.00 0.86
684 759 7.652300 TTAGAAGTATATTAAGTGCATGCGG 57.348 36.000 14.09 0.00 0.00 5.69
685 760 5.853936 AGAAGTATATTAAGTGCATGCGGA 58.146 37.500 14.09 0.00 0.00 5.54
686 761 6.467677 AGAAGTATATTAAGTGCATGCGGAT 58.532 36.000 14.09 3.59 0.00 4.18
687 762 7.611770 AGAAGTATATTAAGTGCATGCGGATA 58.388 34.615 14.09 6.94 0.00 2.59
688 763 8.260818 AGAAGTATATTAAGTGCATGCGGATAT 58.739 33.333 14.09 13.06 0.00 1.63
689 764 8.792830 AAGTATATTAAGTGCATGCGGATATT 57.207 30.769 14.09 5.62 0.00 1.28
690 765 9.884636 AAGTATATTAAGTGCATGCGGATATTA 57.115 29.630 14.09 4.65 0.00 0.98
691 766 9.884636 AGTATATTAAGTGCATGCGGATATTAA 57.115 29.630 14.09 12.83 0.00 1.40
696 771 6.500684 AAGTGCATGCGGATATTAAATAGG 57.499 37.500 14.09 0.00 0.00 2.57
697 772 5.804639 AGTGCATGCGGATATTAAATAGGA 58.195 37.500 14.09 0.00 0.00 2.94
698 773 6.418101 AGTGCATGCGGATATTAAATAGGAT 58.582 36.000 14.09 0.00 0.00 3.24
699 774 7.564793 AGTGCATGCGGATATTAAATAGGATA 58.435 34.615 14.09 0.00 0.00 2.59
700 775 8.213679 AGTGCATGCGGATATTAAATAGGATAT 58.786 33.333 14.09 0.00 0.00 1.63
701 776 8.840321 GTGCATGCGGATATTAAATAGGATATT 58.160 33.333 14.09 0.00 0.00 1.28
726 801 9.658475 TTATTTGCGTGTTATTATGTGATTAGC 57.342 29.630 0.00 0.00 0.00 3.09
727 802 6.670077 TTGCGTGTTATTATGTGATTAGCA 57.330 33.333 0.00 0.00 0.00 3.49
728 803 6.859420 TGCGTGTTATTATGTGATTAGCAT 57.141 33.333 0.00 0.00 0.00 3.79
729 804 7.258022 TGCGTGTTATTATGTGATTAGCATT 57.742 32.000 0.00 0.00 0.00 3.56
730 805 8.371770 TGCGTGTTATTATGTGATTAGCATTA 57.628 30.769 0.00 0.00 0.00 1.90
731 806 8.998377 TGCGTGTTATTATGTGATTAGCATTAT 58.002 29.630 0.00 0.00 0.00 1.28
742 817 8.406730 TGTGATTAGCATTATATTTGGCATGA 57.593 30.769 0.00 0.00 0.00 3.07
743 818 8.858094 TGTGATTAGCATTATATTTGGCATGAA 58.142 29.630 0.00 0.00 0.00 2.57
744 819 9.695526 GTGATTAGCATTATATTTGGCATGAAA 57.304 29.630 0.00 0.00 0.00 2.69
754 829 7.775397 ATATTTGGCATGAAATAAACTGCAC 57.225 32.000 0.00 0.00 36.34 4.57
755 830 3.214697 TGGCATGAAATAAACTGCACG 57.785 42.857 0.00 0.00 36.34 5.34
756 831 1.919918 GGCATGAAATAAACTGCACGC 59.080 47.619 0.00 0.00 36.34 5.34
757 832 2.415893 GGCATGAAATAAACTGCACGCT 60.416 45.455 0.00 0.00 36.34 5.07
758 833 3.181501 GGCATGAAATAAACTGCACGCTA 60.182 43.478 0.00 0.00 36.34 4.26
759 834 4.411327 GCATGAAATAAACTGCACGCTAA 58.589 39.130 0.00 0.00 34.77 3.09
760 835 4.262976 GCATGAAATAAACTGCACGCTAAC 59.737 41.667 0.00 0.00 34.77 2.34
772 847 3.550656 GCTAACGTGTTGAGCGCT 58.449 55.556 11.27 11.27 0.00 5.92
773 848 1.416434 GCTAACGTGTTGAGCGCTC 59.584 57.895 30.42 30.42 0.00 5.03
774 849 1.696644 CTAACGTGTTGAGCGCTCG 59.303 57.895 30.75 21.89 0.00 5.03
775 850 0.728129 CTAACGTGTTGAGCGCTCGA 60.728 55.000 30.75 27.40 0.00 4.04
776 851 1.000233 TAACGTGTTGAGCGCTCGAC 61.000 55.000 39.44 39.44 42.86 4.20
779 854 4.673403 TGTTGAGCGCTCGACATT 57.327 50.000 42.95 9.77 46.09 2.71
780 855 3.804601 TGTTGAGCGCTCGACATTA 57.195 47.368 42.95 28.13 46.09 1.90
781 856 2.073117 TGTTGAGCGCTCGACATTAA 57.927 45.000 42.95 27.81 46.09 1.40
782 857 2.409012 TGTTGAGCGCTCGACATTAAA 58.591 42.857 42.95 27.49 46.09 1.52
783 858 2.411748 TGTTGAGCGCTCGACATTAAAG 59.588 45.455 42.95 0.00 46.09 1.85
784 859 0.999406 TGAGCGCTCGACATTAAAGC 59.001 50.000 30.75 5.13 0.00 3.51
785 860 0.999406 GAGCGCTCGACATTAAAGCA 59.001 50.000 23.61 0.00 35.76 3.91
786 861 1.002366 AGCGCTCGACATTAAAGCAG 58.998 50.000 2.64 0.00 35.76 4.24
787 862 0.721718 GCGCTCGACATTAAAGCAGT 59.278 50.000 0.00 0.00 35.76 4.40
788 863 1.267087 GCGCTCGACATTAAAGCAGTC 60.267 52.381 0.00 0.00 35.76 3.51
789 864 2.263077 CGCTCGACATTAAAGCAGTCT 58.737 47.619 0.00 0.00 35.76 3.24
790 865 3.435566 CGCTCGACATTAAAGCAGTCTA 58.564 45.455 0.00 0.00 35.76 2.59
791 866 3.483922 CGCTCGACATTAAAGCAGTCTAG 59.516 47.826 0.00 0.00 35.76 2.43
792 867 3.799420 GCTCGACATTAAAGCAGTCTAGG 59.201 47.826 0.00 0.00 36.06 3.02
793 868 4.678309 GCTCGACATTAAAGCAGTCTAGGT 60.678 45.833 0.00 0.00 36.06 3.08
794 869 4.995124 TCGACATTAAAGCAGTCTAGGTC 58.005 43.478 0.00 0.00 0.00 3.85
795 870 3.791887 CGACATTAAAGCAGTCTAGGTCG 59.208 47.826 0.00 0.00 39.41 4.79
796 871 4.674623 CGACATTAAAGCAGTCTAGGTCGT 60.675 45.833 0.00 0.00 40.27 4.34
797 872 5.148651 ACATTAAAGCAGTCTAGGTCGTT 57.851 39.130 0.00 0.00 0.00 3.85
798 873 4.929808 ACATTAAAGCAGTCTAGGTCGTTG 59.070 41.667 0.00 0.00 0.00 4.10
799 874 2.457366 AAAGCAGTCTAGGTCGTTGG 57.543 50.000 0.00 0.00 0.00 3.77
800 875 1.629043 AAGCAGTCTAGGTCGTTGGA 58.371 50.000 0.00 0.00 0.00 3.53
801 876 1.853963 AGCAGTCTAGGTCGTTGGAT 58.146 50.000 0.00 0.00 0.00 3.41
802 877 2.180276 AGCAGTCTAGGTCGTTGGATT 58.820 47.619 0.00 0.00 0.00 3.01
803 878 3.362706 AGCAGTCTAGGTCGTTGGATTA 58.637 45.455 0.00 0.00 0.00 1.75
804 879 3.767673 AGCAGTCTAGGTCGTTGGATTAA 59.232 43.478 0.00 0.00 0.00 1.40
805 880 3.864003 GCAGTCTAGGTCGTTGGATTAAC 59.136 47.826 0.00 0.00 35.90 2.01
806 881 4.619863 GCAGTCTAGGTCGTTGGATTAACA 60.620 45.833 0.00 0.00 39.30 2.41
807 882 5.661458 CAGTCTAGGTCGTTGGATTAACAT 58.339 41.667 0.00 0.00 39.30 2.71
808 883 5.520288 CAGTCTAGGTCGTTGGATTAACATG 59.480 44.000 0.00 0.00 39.30 3.21
809 884 5.421056 AGTCTAGGTCGTTGGATTAACATGA 59.579 40.000 0.00 0.00 39.30 3.07
810 885 6.098409 AGTCTAGGTCGTTGGATTAACATGAT 59.902 38.462 0.00 0.00 39.30 2.45
811 886 6.761714 GTCTAGGTCGTTGGATTAACATGATT 59.238 38.462 0.00 0.00 39.30 2.57
812 887 7.280205 GTCTAGGTCGTTGGATTAACATGATTT 59.720 37.037 0.00 0.00 39.30 2.17
813 888 6.194796 AGGTCGTTGGATTAACATGATTTG 57.805 37.500 0.00 0.00 39.30 2.32
814 889 5.943416 AGGTCGTTGGATTAACATGATTTGA 59.057 36.000 0.00 0.00 39.30 2.69
815 890 6.603201 AGGTCGTTGGATTAACATGATTTGAT 59.397 34.615 0.00 0.00 39.30 2.57
816 891 6.692681 GGTCGTTGGATTAACATGATTTGATG 59.307 38.462 0.00 0.00 39.30 3.07
817 892 6.692681 GTCGTTGGATTAACATGATTTGATGG 59.307 38.462 0.00 0.00 39.30 3.51
818 893 6.376864 TCGTTGGATTAACATGATTTGATGGT 59.623 34.615 0.00 0.00 39.30 3.55
819 894 6.692681 CGTTGGATTAACATGATTTGATGGTC 59.307 38.462 0.00 0.00 39.30 4.02
820 895 6.375945 TGGATTAACATGATTTGATGGTCG 57.624 37.500 0.00 0.00 0.00 4.79
821 896 6.118852 TGGATTAACATGATTTGATGGTCGA 58.881 36.000 0.00 0.00 0.00 4.20
822 897 6.260714 TGGATTAACATGATTTGATGGTCGAG 59.739 38.462 0.00 0.00 0.00 4.04
823 898 6.483307 GGATTAACATGATTTGATGGTCGAGA 59.517 38.462 0.00 0.00 0.00 4.04
824 899 7.173907 GGATTAACATGATTTGATGGTCGAGAT 59.826 37.037 0.00 0.00 0.00 2.75
825 900 7.864108 TTAACATGATTTGATGGTCGAGATT 57.136 32.000 0.00 0.00 0.00 2.40
826 901 8.956533 TTAACATGATTTGATGGTCGAGATTA 57.043 30.769 0.00 0.00 0.00 1.75
827 902 7.864108 AACATGATTTGATGGTCGAGATTAA 57.136 32.000 0.00 0.00 0.00 1.40
828 903 8.455903 AACATGATTTGATGGTCGAGATTAAT 57.544 30.769 0.00 0.00 0.00 1.40
829 904 8.455903 ACATGATTTGATGGTCGAGATTAATT 57.544 30.769 0.00 0.00 0.00 1.40
830 905 9.559732 ACATGATTTGATGGTCGAGATTAATTA 57.440 29.630 0.00 0.00 0.00 1.40
839 914 9.968870 GATGGTCGAGATTAATTAGATATACCC 57.031 37.037 0.00 0.00 0.00 3.69
840 915 9.716556 ATGGTCGAGATTAATTAGATATACCCT 57.283 33.333 0.00 0.00 0.00 4.34
841 916 9.543231 TGGTCGAGATTAATTAGATATACCCTT 57.457 33.333 0.00 0.00 0.00 3.95
861 936 8.721133 ACCCTTTTGAGTCTTTTTATATTGGT 57.279 30.769 0.00 0.00 0.00 3.67
862 937 9.816787 ACCCTTTTGAGTCTTTTTATATTGGTA 57.183 29.630 0.00 0.00 0.00 3.25
948 1025 2.002586 CGGCGTTGTCAAATCATCTCT 58.997 47.619 0.00 0.00 0.00 3.10
951 1028 3.624861 GGCGTTGTCAAATCATCTCTCAT 59.375 43.478 0.00 0.00 0.00 2.90
952 1029 4.495349 GGCGTTGTCAAATCATCTCTCATG 60.495 45.833 0.00 0.00 0.00 3.07
978 1092 5.278512 CCGTGTATAGCATGTATCTGTCACT 60.279 44.000 0.00 0.00 32.30 3.41
981 1100 8.023706 CGTGTATAGCATGTATCTGTCACTTAT 58.976 37.037 0.00 0.00 0.00 1.73
1013 1132 1.450312 GCACCATGCTAGCGAAGGT 60.450 57.895 16.96 16.96 40.96 3.50
1286 1405 9.563898 GTTGCAGTTAATACTACCATTTAAACC 57.436 33.333 0.00 0.00 31.96 3.27
1310 1432 9.113838 ACCTATTGTCATTTGTCAATACATCTC 57.886 33.333 6.26 0.00 35.85 2.75
1333 1455 1.161563 TTGACAACGCCGGGAGAAAC 61.162 55.000 2.18 0.00 0.00 2.78
1471 1596 5.184671 AGAAAAATGATGTGAGCCTTCTTCC 59.815 40.000 0.00 0.00 0.00 3.46
1554 1787 3.480133 GGATGTCCCCGGGGTGAG 61.480 72.222 38.73 14.35 36.47 3.51
1666 1912 1.820519 GCCAGTTGATGAAGGATGCAA 59.179 47.619 0.00 0.00 0.00 4.08
1787 2037 2.653702 GCACTCTCAGCGGACACT 59.346 61.111 0.00 0.00 0.00 3.55
1852 2102 4.251103 TCCATCTTCAGAGCAGGTACTA 57.749 45.455 0.00 0.00 36.02 1.82
1883 2135 1.847798 TTGCCGGGCCTGTAGTTCAT 61.848 55.000 17.97 0.00 0.00 2.57
1898 2150 0.039035 TTCATGCCACTACAACCCCC 59.961 55.000 0.00 0.00 0.00 5.40
1929 2181 0.866061 CTTCCTACACGCGTCCATCG 60.866 60.000 9.86 0.00 43.12 3.84
2031 2283 3.346315 CACCACATAAGCTGTCCATTGA 58.654 45.455 0.00 0.00 35.29 2.57
2091 2346 2.993899 CAAGGATGGTACGACACAAGAC 59.006 50.000 0.00 0.00 0.00 3.01
2099 2354 2.028484 GACACAAGACCGCCGTCA 59.972 61.111 7.93 0.00 41.87 4.35
2101 2356 0.108992 GACACAAGACCGCCGTCATA 60.109 55.000 7.93 0.00 41.87 2.15
2102 2357 0.389426 ACACAAGACCGCCGTCATAC 60.389 55.000 7.93 0.00 41.87 2.39
2103 2358 1.153901 ACAAGACCGCCGTCATACG 60.154 57.895 7.93 0.00 41.87 3.06
2105 2360 0.457166 CAAGACCGCCGTCATACGAA 60.457 55.000 7.93 0.00 46.05 3.85
2106 2361 0.457337 AAGACCGCCGTCATACGAAC 60.457 55.000 7.93 0.00 46.05 3.95
2187 2451 4.431416 AAATATCCCACGCATACTTCCA 57.569 40.909 0.00 0.00 0.00 3.53
2193 2457 5.554437 TCCCACGCATACTTCCATTATTA 57.446 39.130 0.00 0.00 0.00 0.98
2240 2505 8.190784 CGGGCACTGAAATTTATTTTTCTATCT 58.809 33.333 0.00 0.00 36.71 1.98
2268 2533 5.811399 TTTATTACTTGAATCCAGTGGCG 57.189 39.130 3.51 0.00 0.00 5.69
2269 2534 2.107950 TTACTTGAATCCAGTGGCGG 57.892 50.000 3.51 0.00 0.00 6.13
2270 2535 1.271856 TACTTGAATCCAGTGGCGGA 58.728 50.000 3.51 0.00 40.07 5.54
2271 2536 0.036010 ACTTGAATCCAGTGGCGGAG 60.036 55.000 3.51 0.48 38.83 4.63
2286 2551 2.315925 CGGAGCTACATCCACATGTT 57.684 50.000 0.00 0.00 40.66 2.71
2287 2552 2.632377 CGGAGCTACATCCACATGTTT 58.368 47.619 0.00 0.00 40.66 2.83
2288 2553 2.352651 CGGAGCTACATCCACATGTTTG 59.647 50.000 0.00 0.00 40.66 2.93
2289 2554 2.684881 GGAGCTACATCCACATGTTTGG 59.315 50.000 0.00 0.00 40.66 3.28
2290 2555 2.684881 GAGCTACATCCACATGTTTGGG 59.315 50.000 0.00 0.00 40.66 4.12
2291 2556 1.134946 GCTACATCCACATGTTTGGGC 59.865 52.381 0.00 0.79 40.66 5.36
2292 2557 1.401552 CTACATCCACATGTTTGGGCG 59.598 52.381 0.00 0.00 40.66 6.13
2293 2558 1.250154 ACATCCACATGTTTGGGCGG 61.250 55.000 0.00 0.00 40.66 6.13
2294 2559 1.682005 ATCCACATGTTTGGGCGGG 60.682 57.895 0.00 0.00 37.24 6.13
2295 2560 4.067913 CCACATGTTTGGGCGGGC 62.068 66.667 0.00 0.00 32.35 6.13
2296 2561 4.067913 CACATGTTTGGGCGGGCC 62.068 66.667 14.65 14.65 0.00 5.80
2297 2562 4.612279 ACATGTTTGGGCGGGCCA 62.612 61.111 20.63 20.63 37.98 5.36
2298 2563 3.762247 CATGTTTGGGCGGGCCAG 61.762 66.667 23.18 7.88 37.98 4.85
2301 2566 4.733542 GTTTGGGCGGGCCAGCTA 62.734 66.667 27.28 14.09 37.98 3.32
2302 2567 3.972997 TTTGGGCGGGCCAGCTAA 61.973 61.111 27.28 18.96 37.98 3.09
2303 2568 3.936772 TTTGGGCGGGCCAGCTAAG 62.937 63.158 27.28 0.48 37.98 2.18
2305 2570 3.878667 GGGCGGGCCAGCTAAGAT 61.879 66.667 27.28 0.00 37.98 2.40
2306 2571 2.516888 GGGCGGGCCAGCTAAGATA 61.517 63.158 27.28 0.00 37.98 1.98
2307 2572 1.450211 GGCGGGCCAGCTAAGATAA 59.550 57.895 27.28 0.00 37.29 1.75
2308 2573 0.179029 GGCGGGCCAGCTAAGATAAA 60.179 55.000 27.28 0.00 37.29 1.40
2309 2574 1.545651 GGCGGGCCAGCTAAGATAAAT 60.546 52.381 27.28 0.00 37.29 1.40
2310 2575 2.290071 GGCGGGCCAGCTAAGATAAATA 60.290 50.000 27.28 0.00 37.29 1.40
2311 2576 3.610911 GCGGGCCAGCTAAGATAAATAT 58.389 45.455 21.61 0.00 0.00 1.28
2312 2577 4.010349 GCGGGCCAGCTAAGATAAATATT 58.990 43.478 21.61 0.00 0.00 1.28
2313 2578 5.183228 GCGGGCCAGCTAAGATAAATATTA 58.817 41.667 21.61 0.00 0.00 0.98
2314 2579 5.064834 GCGGGCCAGCTAAGATAAATATTAC 59.935 44.000 21.61 0.00 0.00 1.89
2315 2580 6.170506 CGGGCCAGCTAAGATAAATATTACA 58.829 40.000 4.39 0.00 0.00 2.41
2316 2581 6.092259 CGGGCCAGCTAAGATAAATATTACAC 59.908 42.308 4.39 0.00 0.00 2.90
2317 2582 7.168905 GGGCCAGCTAAGATAAATATTACACT 58.831 38.462 4.39 0.00 0.00 3.55
2318 2583 8.319146 GGGCCAGCTAAGATAAATATTACACTA 58.681 37.037 4.39 0.00 0.00 2.74
2319 2584 9.892130 GGCCAGCTAAGATAAATATTACACTAT 57.108 33.333 0.00 0.00 0.00 2.12
2346 2611 8.860088 ACATCTAAAGTTTTGCTTTTATGGTCT 58.140 29.630 0.00 0.00 44.41 3.85
2356 2621 9.988815 TTTTGCTTTTATGGTCTAAATTAAGCA 57.011 25.926 0.00 0.00 0.00 3.91
2357 2622 8.980143 TTGCTTTTATGGTCTAAATTAAGCAC 57.020 30.769 0.00 0.00 0.00 4.40
2358 2623 7.543756 TGCTTTTATGGTCTAAATTAAGCACC 58.456 34.615 0.00 0.00 0.00 5.01
2359 2624 7.177568 TGCTTTTATGGTCTAAATTAAGCACCA 59.822 33.333 0.00 1.91 41.36 4.17
2360 2625 7.702348 GCTTTTATGGTCTAAATTAAGCACCAG 59.298 37.037 0.00 0.00 40.46 4.00
2361 2626 8.644374 TTTTATGGTCTAAATTAAGCACCAGT 57.356 30.769 0.00 0.00 40.46 4.00
2362 2627 7.859325 TTATGGTCTAAATTAAGCACCAGTC 57.141 36.000 0.00 0.00 40.46 3.51
2363 2628 5.499004 TGGTCTAAATTAAGCACCAGTCT 57.501 39.130 0.00 0.00 31.99 3.24
2364 2629 5.876357 TGGTCTAAATTAAGCACCAGTCTT 58.124 37.500 0.00 0.00 31.99 3.01
2365 2630 5.938125 TGGTCTAAATTAAGCACCAGTCTTC 59.062 40.000 0.00 0.00 31.99 2.87
2366 2631 5.938125 GGTCTAAATTAAGCACCAGTCTTCA 59.062 40.000 0.00 0.00 0.00 3.02
2367 2632 6.128254 GGTCTAAATTAAGCACCAGTCTTCAC 60.128 42.308 0.00 0.00 0.00 3.18
2368 2633 6.651225 GTCTAAATTAAGCACCAGTCTTCACT 59.349 38.462 0.00 0.00 0.00 3.41
2369 2634 7.817962 GTCTAAATTAAGCACCAGTCTTCACTA 59.182 37.037 0.00 0.00 0.00 2.74
2370 2635 8.372459 TCTAAATTAAGCACCAGTCTTCACTAA 58.628 33.333 0.00 0.00 0.00 2.24
2371 2636 7.817418 AAATTAAGCACCAGTCTTCACTAAA 57.183 32.000 0.00 0.00 0.00 1.85
2372 2637 6.803154 ATTAAGCACCAGTCTTCACTAAAC 57.197 37.500 0.00 0.00 0.00 2.01
2373 2638 4.423625 AAGCACCAGTCTTCACTAAACT 57.576 40.909 0.00 0.00 0.00 2.66
2374 2639 4.423625 AGCACCAGTCTTCACTAAACTT 57.576 40.909 0.00 0.00 0.00 2.66
2375 2640 4.781934 AGCACCAGTCTTCACTAAACTTT 58.218 39.130 0.00 0.00 0.00 2.66
2376 2641 5.925509 AGCACCAGTCTTCACTAAACTTTA 58.074 37.500 0.00 0.00 0.00 1.85
2377 2642 5.992217 AGCACCAGTCTTCACTAAACTTTAG 59.008 40.000 6.96 6.96 0.00 1.85
2378 2643 5.758784 GCACCAGTCTTCACTAAACTTTAGT 59.241 40.000 8.19 8.19 0.00 2.24
2379 2644 6.260271 GCACCAGTCTTCACTAAACTTTAGTT 59.740 38.462 10.93 0.00 40.50 2.24
2380 2645 7.630924 CACCAGTCTTCACTAAACTTTAGTTG 58.369 38.462 10.93 6.63 38.44 3.16
2381 2646 7.494625 CACCAGTCTTCACTAAACTTTAGTTGA 59.505 37.037 10.93 9.52 38.44 3.18
2382 2647 7.711339 ACCAGTCTTCACTAAACTTTAGTTGAG 59.289 37.037 10.93 11.30 41.34 3.02
2384 2649 9.099454 CAGTCTTCACTAAACTTTAGTTGAGTT 57.901 33.333 10.93 4.34 45.15 3.01
2385 2650 9.099454 AGTCTTCACTAAACTTTAGTTGAGTTG 57.901 33.333 10.93 6.58 45.15 3.16
2386 2651 8.336080 GTCTTCACTAAACTTTAGTTGAGTTGG 58.664 37.037 10.93 1.65 45.15 3.77
2387 2652 7.497909 TCTTCACTAAACTTTAGTTGAGTTGGG 59.502 37.037 10.93 1.04 45.15 4.12
2388 2653 5.529800 TCACTAAACTTTAGTTGAGTTGGGC 59.470 40.000 10.93 0.00 45.15 5.36
2389 2654 3.982576 AAACTTTAGTTGAGTTGGGCG 57.017 42.857 0.00 0.00 37.41 6.13
2390 2655 1.892209 ACTTTAGTTGAGTTGGGCGG 58.108 50.000 0.00 0.00 0.00 6.13
2391 2656 1.165270 CTTTAGTTGAGTTGGGCGGG 58.835 55.000 0.00 0.00 0.00 6.13
2392 2657 0.891904 TTTAGTTGAGTTGGGCGGGC 60.892 55.000 0.00 0.00 0.00 6.13
2393 2658 2.757980 TTAGTTGAGTTGGGCGGGCC 62.758 60.000 14.65 14.65 0.00 5.80
2394 2659 4.966787 GTTGAGTTGGGCGGGCCA 62.967 66.667 20.63 20.63 37.98 5.36
2395 2660 3.978193 TTGAGTTGGGCGGGCCAT 61.978 61.111 25.00 10.60 37.98 4.40
2396 2661 4.738998 TGAGTTGGGCGGGCCATG 62.739 66.667 25.00 0.00 37.98 3.66
2416 2681 4.157607 CTGGTTTTGCCCAGTCGT 57.842 55.556 0.00 0.00 45.81 4.34
2417 2682 3.315765 CTGGTTTTGCCCAGTCGTA 57.684 52.632 0.00 0.00 45.81 3.43
2418 2683 1.156736 CTGGTTTTGCCCAGTCGTAG 58.843 55.000 0.00 0.00 45.81 3.51
2419 2684 0.887387 TGGTTTTGCCCAGTCGTAGC 60.887 55.000 0.00 0.00 36.04 3.58
2420 2685 0.605589 GGTTTTGCCCAGTCGTAGCT 60.606 55.000 0.00 0.00 0.00 3.32
2421 2686 0.796927 GTTTTGCCCAGTCGTAGCTC 59.203 55.000 0.00 0.00 0.00 4.09
2422 2687 0.321298 TTTTGCCCAGTCGTAGCTCC 60.321 55.000 0.00 0.00 0.00 4.70
2423 2688 2.501223 TTTGCCCAGTCGTAGCTCCG 62.501 60.000 0.00 0.00 0.00 4.63
2424 2689 4.874977 GCCCAGTCGTAGCTCCGC 62.875 72.222 0.00 0.00 0.00 5.54
2425 2690 4.208686 CCCAGTCGTAGCTCCGCC 62.209 72.222 0.00 0.00 0.00 6.13
2426 2691 3.449227 CCAGTCGTAGCTCCGCCA 61.449 66.667 0.00 0.00 0.00 5.69
2427 2692 2.202623 CAGTCGTAGCTCCGCCAC 60.203 66.667 0.00 0.00 0.00 5.01
2428 2693 2.361357 AGTCGTAGCTCCGCCACT 60.361 61.111 0.00 0.00 0.00 4.00
2429 2694 2.202623 GTCGTAGCTCCGCCACTG 60.203 66.667 0.00 0.00 0.00 3.66
2430 2695 4.129737 TCGTAGCTCCGCCACTGC 62.130 66.667 0.00 0.00 0.00 4.40
2431 2696 4.135153 CGTAGCTCCGCCACTGCT 62.135 66.667 0.00 0.00 40.43 4.24
2432 2697 2.266055 GTAGCTCCGCCACTGCTT 59.734 61.111 0.00 0.00 38.15 3.91
2433 2698 2.103042 GTAGCTCCGCCACTGCTTG 61.103 63.158 0.00 0.00 38.15 4.01
2434 2699 2.282783 TAGCTCCGCCACTGCTTGA 61.283 57.895 0.00 0.00 38.15 3.02
2435 2700 1.826340 TAGCTCCGCCACTGCTTGAA 61.826 55.000 0.00 0.00 38.15 2.69
2436 2701 2.042831 GCTCCGCCACTGCTTGAAT 61.043 57.895 0.00 0.00 34.43 2.57
2437 2702 1.986575 GCTCCGCCACTGCTTGAATC 61.987 60.000 0.00 0.00 34.43 2.52
2482 2747 2.304470 TGCTTGGACATACTAACTGGCA 59.696 45.455 0.00 0.00 0.00 4.92
2483 2748 3.244735 TGCTTGGACATACTAACTGGCAA 60.245 43.478 0.00 0.00 0.00 4.52
2484 2749 3.947834 GCTTGGACATACTAACTGGCAAT 59.052 43.478 0.00 0.00 0.00 3.56
2490 2755 5.880332 GGACATACTAACTGGCAATGAAGAA 59.120 40.000 1.84 0.00 0.00 2.52
2491 2756 6.037610 GGACATACTAACTGGCAATGAAGAAG 59.962 42.308 1.84 0.00 0.00 2.85
2514 2780 5.815740 AGTAACGTGGAAATTCGATGCTTAT 59.184 36.000 0.00 0.00 0.00 1.73
2522 2788 8.488764 GTGGAAATTCGATGCTTATAACTACTC 58.511 37.037 0.00 0.00 0.00 2.59
2526 2792 6.726490 TTCGATGCTTATAACTACTCCCTT 57.274 37.500 0.00 0.00 0.00 3.95
2716 2982 5.343307 AACTTTGTGAAATTTGACCTGCT 57.657 34.783 5.29 0.00 0.00 4.24
2753 3020 7.993183 ACATGAAGAGTAAAAAGAAACAGAGGA 59.007 33.333 0.00 0.00 0.00 3.71
2794 3061 9.816354 CTTTTCTGTTCAAGGAAAAGGAAAATA 57.184 29.630 15.92 0.00 46.82 1.40
2930 3197 5.706916 CCAACTTGGTCTCTGATTCAATTG 58.293 41.667 0.00 0.00 31.35 2.32
3095 3755 8.902540 AAAGGGAGCCAAAAAGTTAATTTAAG 57.097 30.769 0.00 0.00 0.00 1.85
3096 3756 7.612065 AGGGAGCCAAAAAGTTAATTTAAGT 57.388 32.000 0.00 0.00 0.00 2.24
3121 3794 7.817478 GTGACAGGGGTTTATTTGGAATTTTAG 59.183 37.037 0.00 0.00 0.00 1.85
3165 3838 7.360607 GCTCGCTGGTATAAAACTAAGACAAAA 60.361 37.037 0.00 0.00 0.00 2.44
3258 3961 6.012658 TGATGCTGACAAAACCATAGTTTC 57.987 37.500 0.00 0.00 45.54 2.78
3384 4109 5.246203 AGTTTGCTGATACTGTCTGGAACTA 59.754 40.000 0.00 0.00 36.21 2.24
3465 4222 9.994432 CAGTTTTATCATGTCTCTTTATGGAAC 57.006 33.333 0.00 0.00 0.00 3.62
3500 4257 3.763097 TGCATGAATAAGCACCTTTCG 57.237 42.857 0.00 0.00 35.51 3.46
3519 4276 6.419413 CCTTTCGTAGATCTTCAGTTATGAGC 59.581 42.308 0.00 0.00 34.01 4.26
3532 4332 6.888105 TCAGTTATGAGCAATCACAATCCTA 58.112 36.000 0.00 0.00 0.00 2.94
3564 4364 4.423732 ACGCCAAATGTGATTATCTTTGC 58.576 39.130 0.00 0.00 0.00 3.68
3774 4576 4.941873 CAGGGTTAAGTGGTTCAGGTATTC 59.058 45.833 0.00 0.00 0.00 1.75
3788 4590 4.081697 TCAGGTATTCACGAGCTGATCAAA 60.082 41.667 0.00 0.00 44.33 2.69
4075 4882 8.958119 TGCCTTGTAGTTATACCATTTCTAAG 57.042 34.615 0.00 0.00 0.00 2.18
4246 5067 6.861065 TTTTCACACACTGTAGAATTCCTC 57.139 37.500 0.65 0.00 0.00 3.71
4314 5139 9.447040 GAAAAGTGTATTTTCTGTAGGTGTTTC 57.553 33.333 5.96 0.00 35.97 2.78
4336 5161 4.821805 TCTGAATGTCCCACTTGAAGTTTC 59.178 41.667 0.00 0.00 0.00 2.78
4346 5171 5.300752 CCACTTGAAGTTTCTGAAGCTAGA 58.699 41.667 7.20 0.00 0.00 2.43
4422 5249 4.929819 ACCAACTGACCACCATTTTTAC 57.070 40.909 0.00 0.00 0.00 2.01
4467 5296 2.052782 AATCATCCGCAGGGTTTACC 57.947 50.000 0.00 0.00 39.56 2.85
4669 5498 4.711846 TCCTTGCAGATAGTGATACAGTGT 59.288 41.667 0.00 0.00 0.00 3.55
4754 5583 6.825721 AGCAAATGAGTTCTTACAGGATTAGG 59.174 38.462 0.00 0.00 0.00 2.69
4760 5589 4.776308 AGTTCTTACAGGATTAGGGACGTT 59.224 41.667 0.00 0.00 0.00 3.99
4841 5674 7.760340 GGTAGTGTTTATGTCTAGAAAGAGTGG 59.240 40.741 0.00 0.00 30.45 4.00
4943 5790 1.307355 TGGCTGTGTGCATTGATCGG 61.307 55.000 0.00 0.00 45.15 4.18
4953 5800 1.004230 ATTGATCGGTGGGAGGGGA 59.996 57.895 0.00 0.00 0.00 4.81
4977 5825 1.199097 GGTACCGACCTGCATTTTGTG 59.801 52.381 0.00 0.00 43.16 3.33
4986 5834 5.615544 CGACCTGCATTTTGTGAAGTTCTAG 60.616 44.000 4.17 0.00 30.71 2.43
5022 5870 9.982651 GGAAAAACTATTTCTTTCTTAAAGCCT 57.017 29.630 1.47 0.00 38.39 4.58
5028 5876 3.721087 TCTTTCTTAAAGCCTCCCTGG 57.279 47.619 0.00 0.00 38.39 4.45
5050 5898 2.938956 ATGTACCCAGCCTGATTAGC 57.061 50.000 0.00 0.00 0.00 3.09
5051 5899 1.578897 TGTACCCAGCCTGATTAGCA 58.421 50.000 0.00 0.00 0.00 3.49
5135 5983 7.414429 GGGCTTTTGAAATATTTTGCTGGAATC 60.414 37.037 1.43 0.00 0.00 2.52
5150 5998 4.970003 GCTGGAATCACGTAAACATAATGC 59.030 41.667 0.00 0.00 0.00 3.56
5151 5999 5.448496 GCTGGAATCACGTAAACATAATGCA 60.448 40.000 0.00 0.00 0.00 3.96
5152 6000 6.691754 TGGAATCACGTAAACATAATGCAT 57.308 33.333 0.00 0.00 0.00 3.96
5153 6001 6.493978 TGGAATCACGTAAACATAATGCATG 58.506 36.000 0.00 0.00 40.78 4.06
5217 6065 9.944663 GGCACAATCGAGTAATAATTTAAATCA 57.055 29.630 0.10 0.00 0.00 2.57
5257 6109 8.907222 ATTGATAACAAAAAGTCAATTTGGCT 57.093 26.923 0.00 0.00 41.08 4.75
5414 6270 7.562454 AAATAAAAACGTCTTCCTCAACTCA 57.438 32.000 0.00 0.00 0.00 3.41
5485 6341 9.396022 CAGGTTGAAGGTCTTAATATGTGTAAT 57.604 33.333 0.00 0.00 0.00 1.89
5591 6447 9.455847 CTCTGCAATTTGCTAAATTAATACTCC 57.544 33.333 21.19 0.00 45.31 3.85
5592 6448 8.413229 TCTGCAATTTGCTAAATTAATACTCCC 58.587 33.333 21.19 0.00 45.31 4.30
5593 6449 8.305046 TGCAATTTGCTAAATTAATACTCCCT 57.695 30.769 21.19 0.00 45.31 4.20
5594 6450 8.413229 TGCAATTTGCTAAATTAATACTCCCTC 58.587 33.333 21.19 0.00 45.31 4.30
5595 6451 7.867909 GCAATTTGCTAAATTAATACTCCCTCC 59.132 37.037 14.11 0.00 40.96 4.30
5596 6452 7.745620 ATTTGCTAAATTAATACTCCCTCCG 57.254 36.000 0.00 0.00 0.00 4.63
5597 6453 5.881923 TGCTAAATTAATACTCCCTCCGT 57.118 39.130 0.00 0.00 0.00 4.69
5598 6454 6.243216 TGCTAAATTAATACTCCCTCCGTT 57.757 37.500 0.00 0.00 0.00 4.44
5599 6455 6.285990 TGCTAAATTAATACTCCCTCCGTTC 58.714 40.000 0.00 0.00 0.00 3.95
5600 6456 5.699915 GCTAAATTAATACTCCCTCCGTTCC 59.300 44.000 0.00 0.00 0.00 3.62
5601 6457 5.970501 AAATTAATACTCCCTCCGTTCCT 57.029 39.130 0.00 0.00 0.00 3.36
5602 6458 5.970501 AATTAATACTCCCTCCGTTCCTT 57.029 39.130 0.00 0.00 0.00 3.36
5603 6459 4.748277 TTAATACTCCCTCCGTTCCTTG 57.252 45.455 0.00 0.00 0.00 3.61
5604 6460 2.544844 ATACTCCCTCCGTTCCTTGA 57.455 50.000 0.00 0.00 0.00 3.02
5605 6461 2.544844 TACTCCCTCCGTTCCTTGAT 57.455 50.000 0.00 0.00 0.00 2.57
5606 6462 2.544844 ACTCCCTCCGTTCCTTGATA 57.455 50.000 0.00 0.00 0.00 2.15
5607 6463 3.047695 ACTCCCTCCGTTCCTTGATAT 57.952 47.619 0.00 0.00 0.00 1.63
5608 6464 4.194678 ACTCCCTCCGTTCCTTGATATA 57.805 45.455 0.00 0.00 0.00 0.86
5609 6465 4.553678 ACTCCCTCCGTTCCTTGATATAA 58.446 43.478 0.00 0.00 0.00 0.98
5610 6466 4.589374 ACTCCCTCCGTTCCTTGATATAAG 59.411 45.833 0.00 0.00 0.00 1.73
5611 6467 3.901844 TCCCTCCGTTCCTTGATATAAGG 59.098 47.826 0.00 0.00 38.78 2.69
5612 6468 3.646637 CCCTCCGTTCCTTGATATAAGGT 59.353 47.826 5.67 0.00 38.55 3.50
5613 6469 4.503296 CCCTCCGTTCCTTGATATAAGGTG 60.503 50.000 5.67 0.00 38.55 4.00
5614 6470 4.101119 CCTCCGTTCCTTGATATAAGGTGT 59.899 45.833 5.67 0.00 38.55 4.16
5615 6471 5.303589 CCTCCGTTCCTTGATATAAGGTGTA 59.696 44.000 5.67 0.00 38.55 2.90
5616 6472 6.014499 CCTCCGTTCCTTGATATAAGGTGTAT 60.014 42.308 5.67 0.00 38.55 2.29
5617 6473 7.177921 CCTCCGTTCCTTGATATAAGGTGTATA 59.822 40.741 5.67 0.00 38.55 1.47
5618 6474 8.118976 TCCGTTCCTTGATATAAGGTGTATAG 57.881 38.462 5.67 0.00 38.55 1.31
5619 6475 7.946219 TCCGTTCCTTGATATAAGGTGTATAGA 59.054 37.037 5.67 0.00 38.55 1.98
5620 6476 8.750298 CCGTTCCTTGATATAAGGTGTATAGAT 58.250 37.037 5.67 0.00 38.55 1.98
5655 6511 6.628919 AACCCGAAATATAAGGTGTATTGC 57.371 37.500 0.00 0.00 31.45 3.56
5656 6512 5.686753 ACCCGAAATATAAGGTGTATTGCA 58.313 37.500 0.00 0.00 0.00 4.08
5657 6513 6.303839 ACCCGAAATATAAGGTGTATTGCAT 58.696 36.000 0.00 0.00 0.00 3.96
5658 6514 6.775629 ACCCGAAATATAAGGTGTATTGCATT 59.224 34.615 0.00 0.00 0.00 3.56
5659 6515 7.083858 CCCGAAATATAAGGTGTATTGCATTG 58.916 38.462 0.00 0.00 0.00 2.82
5660 6516 6.582295 CCGAAATATAAGGTGTATTGCATTGC 59.418 38.462 0.46 0.46 0.00 3.56
5661 6517 7.138081 CGAAATATAAGGTGTATTGCATTGCA 58.862 34.615 7.38 7.38 36.47 4.08
5662 6518 7.113404 CGAAATATAAGGTGTATTGCATTGCAC 59.887 37.037 18.06 18.06 38.71 4.57
5667 6523 2.867429 GTGTATTGCATTGCACCACTC 58.133 47.619 11.66 9.11 38.71 3.51
5668 6524 1.468127 TGTATTGCATTGCACCACTCG 59.532 47.619 11.66 0.00 38.71 4.18
5669 6525 1.468520 GTATTGCATTGCACCACTCGT 59.531 47.619 11.66 0.00 38.71 4.18
5670 6526 0.961019 ATTGCATTGCACCACTCGTT 59.039 45.000 11.66 0.00 38.71 3.85
5671 6527 0.743688 TTGCATTGCACCACTCGTTT 59.256 45.000 11.66 0.00 38.71 3.60
5672 6528 0.030504 TGCATTGCACCACTCGTTTG 59.969 50.000 7.38 0.00 31.71 2.93
5673 6529 0.664166 GCATTGCACCACTCGTTTGG 60.664 55.000 3.15 3.82 43.04 3.28
5674 6530 0.950836 CATTGCACCACTCGTTTGGA 59.049 50.000 11.38 0.00 39.24 3.53
5675 6531 1.541147 CATTGCACCACTCGTTTGGAT 59.459 47.619 11.38 0.00 39.24 3.41
5676 6532 2.552599 TTGCACCACTCGTTTGGATA 57.447 45.000 11.38 0.00 39.24 2.59
5677 6533 2.552599 TGCACCACTCGTTTGGATAA 57.447 45.000 11.38 0.00 39.24 1.75
5678 6534 3.066291 TGCACCACTCGTTTGGATAAT 57.934 42.857 11.38 0.00 39.24 1.28
5679 6535 3.417101 TGCACCACTCGTTTGGATAATT 58.583 40.909 11.38 0.00 39.24 1.40
5680 6536 3.823873 TGCACCACTCGTTTGGATAATTT 59.176 39.130 11.38 0.00 39.24 1.82
5681 6537 4.279671 TGCACCACTCGTTTGGATAATTTT 59.720 37.500 11.38 0.00 39.24 1.82
5682 6538 5.221342 TGCACCACTCGTTTGGATAATTTTT 60.221 36.000 11.38 0.00 39.24 1.94
5705 6561 8.434589 TTTTCAGGGATTTGATTACATTTCCT 57.565 30.769 0.00 0.00 31.95 3.36
5706 6562 8.434589 TTTCAGGGATTTGATTACATTTCCTT 57.565 30.769 0.00 0.00 31.95 3.36
5707 6563 9.540538 TTTCAGGGATTTGATTACATTTCCTTA 57.459 29.630 0.00 0.00 31.95 2.69
5708 6564 9.713684 TTCAGGGATTTGATTACATTTCCTTAT 57.286 29.630 0.00 0.00 31.95 1.73
5722 6578 8.870075 ACATTTCCTTATATTAGGCAATCTCC 57.130 34.615 3.08 0.00 30.15 3.71
5723 6579 8.673251 ACATTTCCTTATATTAGGCAATCTCCT 58.327 33.333 3.08 0.00 40.21 3.69
5724 6580 9.171877 CATTTCCTTATATTAGGCAATCTCCTC 57.828 37.037 3.08 0.00 37.66 3.71
5725 6581 8.511748 TTTCCTTATATTAGGCAATCTCCTCT 57.488 34.615 2.71 0.00 37.66 3.69
5726 6582 9.615660 TTTCCTTATATTAGGCAATCTCCTCTA 57.384 33.333 2.71 0.00 37.66 2.43
5727 6583 9.790297 TTCCTTATATTAGGCAATCTCCTCTAT 57.210 33.333 2.71 0.00 37.66 1.98
5728 6584 9.206690 TCCTTATATTAGGCAATCTCCTCTATG 57.793 37.037 2.71 0.00 37.66 2.23
5729 6585 8.986991 CCTTATATTAGGCAATCTCCTCTATGT 58.013 37.037 0.00 0.00 37.66 2.29
5732 6588 8.677870 ATATTAGGCAATCTCCTCTATGTTCT 57.322 34.615 0.00 0.00 37.66 3.01
5733 6589 4.953940 AGGCAATCTCCTCTATGTTCTC 57.046 45.455 0.00 0.00 0.00 2.87
5734 6590 4.293494 AGGCAATCTCCTCTATGTTCTCA 58.707 43.478 0.00 0.00 0.00 3.27
5735 6591 4.906664 AGGCAATCTCCTCTATGTTCTCAT 59.093 41.667 0.00 0.00 38.00 2.90
5736 6592 4.996122 GGCAATCTCCTCTATGTTCTCATG 59.004 45.833 0.00 0.00 35.70 3.07
5737 6593 4.451774 GCAATCTCCTCTATGTTCTCATGC 59.548 45.833 0.00 0.00 35.70 4.06
5738 6594 4.888326 ATCTCCTCTATGTTCTCATGCC 57.112 45.455 0.00 0.00 35.70 4.40
5739 6595 3.646534 TCTCCTCTATGTTCTCATGCCA 58.353 45.455 0.00 0.00 35.70 4.92
5740 6596 4.033009 TCTCCTCTATGTTCTCATGCCAA 58.967 43.478 0.00 0.00 35.70 4.52
5741 6597 4.657504 TCTCCTCTATGTTCTCATGCCAAT 59.342 41.667 0.00 0.00 35.70 3.16
5742 6598 5.131642 TCTCCTCTATGTTCTCATGCCAATT 59.868 40.000 0.00 0.00 35.70 2.32
5743 6599 6.327365 TCTCCTCTATGTTCTCATGCCAATTA 59.673 38.462 0.00 0.00 35.70 1.40
5744 6600 6.528321 TCCTCTATGTTCTCATGCCAATTAG 58.472 40.000 0.00 0.00 35.70 1.73
5745 6601 6.100279 TCCTCTATGTTCTCATGCCAATTAGT 59.900 38.462 0.00 0.00 35.70 2.24
5746 6602 6.426328 CCTCTATGTTCTCATGCCAATTAGTC 59.574 42.308 0.00 0.00 35.70 2.59
5747 6603 6.888105 TCTATGTTCTCATGCCAATTAGTCA 58.112 36.000 0.00 0.00 35.70 3.41
5748 6604 6.988580 TCTATGTTCTCATGCCAATTAGTCAG 59.011 38.462 0.00 0.00 35.70 3.51
5749 6605 4.264253 TGTTCTCATGCCAATTAGTCAGG 58.736 43.478 0.00 0.00 0.00 3.86
5750 6606 4.263462 TGTTCTCATGCCAATTAGTCAGGT 60.263 41.667 0.00 0.00 0.00 4.00
5751 6607 3.877559 TCTCATGCCAATTAGTCAGGTG 58.122 45.455 0.00 0.00 0.00 4.00
5752 6608 3.264193 TCTCATGCCAATTAGTCAGGTGT 59.736 43.478 0.00 0.00 0.00 4.16
5753 6609 4.469586 TCTCATGCCAATTAGTCAGGTGTA 59.530 41.667 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 5.175491 ACTCAATTTTACATGCGCAGTTTTG 59.825 36.000 18.32 12.13 0.00 2.44
46 47 5.393452 CGATAACTCAATTTTACATGCGCAG 59.607 40.000 18.32 10.85 0.00 5.18
137 143 3.519107 TCTGCACATGAACCCTCTATTCA 59.481 43.478 0.00 0.00 40.25 2.57
155 162 0.730494 GCAAAACATCGCACCTCTGC 60.730 55.000 0.00 0.00 40.38 4.26
165 172 1.142474 GCCACTGCTTGCAAAACATC 58.858 50.000 0.00 0.00 33.53 3.06
193 201 8.462016 TCATTTAGCTCTCTCTTAATTTTTGCC 58.538 33.333 0.00 0.00 0.00 4.52
264 272 1.303561 ATGGCGGCTCTTGCTTTCA 60.304 52.632 11.43 0.00 39.59 2.69
268 276 2.188994 GAGATGGCGGCTCTTGCT 59.811 61.111 11.43 0.00 39.59 3.91
299 307 3.006430 GTCCAATTTTTCAACGGGGTCAT 59.994 43.478 0.00 0.00 0.00 3.06
300 308 2.362717 GTCCAATTTTTCAACGGGGTCA 59.637 45.455 0.00 0.00 0.00 4.02
303 311 1.336424 CCGTCCAATTTTTCAACGGGG 60.336 52.381 4.40 0.00 46.89 5.73
356 364 1.134580 CCCTCATCGTTGCTGTCTGAT 60.135 52.381 0.00 0.00 0.00 2.90
364 372 0.893727 AAACCCACCCTCATCGTTGC 60.894 55.000 0.00 0.00 0.00 4.17
412 420 1.338136 CCGTGGGGCTCACTTATCCT 61.338 60.000 16.74 0.00 43.94 3.24
448 456 7.148171 GGCTGCATAAAAAGTTGACTCTCTTAT 60.148 37.037 0.50 0.00 0.00 1.73
452 460 4.457257 AGGCTGCATAAAAAGTTGACTCTC 59.543 41.667 0.50 0.00 0.00 3.20
491 505 6.688073 AATCTGACCCGGATTATGATAGTT 57.312 37.500 0.73 0.00 37.65 2.24
495 509 7.689299 TGATTAAATCTGACCCGGATTATGAT 58.311 34.615 0.73 0.00 38.36 2.45
581 597 5.278808 GGGTTAGCATCACGTATGACTATCA 60.279 44.000 8.57 0.00 37.79 2.15
597 672 2.303600 ACTACCACATTTCGGGTTAGCA 59.696 45.455 0.00 0.00 38.60 3.49
598 673 2.981898 ACTACCACATTTCGGGTTAGC 58.018 47.619 0.00 0.00 38.60 3.09
626 701 4.769859 TGCACGTACACATTGACTAGTA 57.230 40.909 0.00 0.00 0.00 1.82
627 702 3.653539 TGCACGTACACATTGACTAGT 57.346 42.857 0.00 0.00 0.00 2.57
628 703 4.724885 GCATTGCACGTACACATTGACTAG 60.725 45.833 3.15 0.00 0.00 2.57
629 704 3.124466 GCATTGCACGTACACATTGACTA 59.876 43.478 3.15 0.00 0.00 2.59
630 705 2.095768 GCATTGCACGTACACATTGACT 60.096 45.455 3.15 0.00 0.00 3.41
631 706 2.241722 GCATTGCACGTACACATTGAC 58.758 47.619 3.15 1.49 0.00 3.18
632 707 1.876156 TGCATTGCACGTACACATTGA 59.124 42.857 7.38 0.00 31.71 2.57
633 708 2.328655 TGCATTGCACGTACACATTG 57.671 45.000 7.38 0.00 31.71 2.82
644 719 6.007936 ACTTCTAAATTAACGTGCATTGCA 57.992 33.333 7.38 7.38 35.60 4.08
645 720 9.878599 ATATACTTCTAAATTAACGTGCATTGC 57.121 29.630 0.46 0.46 0.00 3.56
658 733 8.721478 CCGCATGCACTTAATATACTTCTAAAT 58.279 33.333 19.57 0.00 0.00 1.40
659 734 7.929245 TCCGCATGCACTTAATATACTTCTAAA 59.071 33.333 19.57 0.00 0.00 1.85
660 735 7.438564 TCCGCATGCACTTAATATACTTCTAA 58.561 34.615 19.57 0.00 0.00 2.10
661 736 6.988522 TCCGCATGCACTTAATATACTTCTA 58.011 36.000 19.57 0.00 0.00 2.10
662 737 5.853936 TCCGCATGCACTTAATATACTTCT 58.146 37.500 19.57 0.00 0.00 2.85
663 738 6.727824 ATCCGCATGCACTTAATATACTTC 57.272 37.500 19.57 0.00 0.00 3.01
664 739 8.792830 AATATCCGCATGCACTTAATATACTT 57.207 30.769 19.57 0.00 0.00 2.24
665 740 9.884636 TTAATATCCGCATGCACTTAATATACT 57.115 29.630 19.57 2.37 0.00 2.12
670 745 8.677300 CCTATTTAATATCCGCATGCACTTAAT 58.323 33.333 19.57 8.03 0.00 1.40
671 746 7.880713 TCCTATTTAATATCCGCATGCACTTAA 59.119 33.333 19.57 10.13 0.00 1.85
672 747 7.390823 TCCTATTTAATATCCGCATGCACTTA 58.609 34.615 19.57 5.72 0.00 2.24
673 748 6.237901 TCCTATTTAATATCCGCATGCACTT 58.762 36.000 19.57 3.39 0.00 3.16
674 749 5.804639 TCCTATTTAATATCCGCATGCACT 58.195 37.500 19.57 3.59 0.00 4.40
675 750 6.683974 ATCCTATTTAATATCCGCATGCAC 57.316 37.500 19.57 0.00 0.00 4.57
676 751 8.978874 AATATCCTATTTAATATCCGCATGCA 57.021 30.769 19.57 0.00 0.00 3.96
700 775 9.658475 GCTAATCACATAATAACACGCAAATAA 57.342 29.630 0.00 0.00 0.00 1.40
701 776 8.831550 TGCTAATCACATAATAACACGCAAATA 58.168 29.630 0.00 0.00 0.00 1.40
702 777 7.702386 TGCTAATCACATAATAACACGCAAAT 58.298 30.769 0.00 0.00 0.00 2.32
703 778 7.078011 TGCTAATCACATAATAACACGCAAA 57.922 32.000 0.00 0.00 0.00 3.68
704 779 6.670077 TGCTAATCACATAATAACACGCAA 57.330 33.333 0.00 0.00 0.00 4.85
705 780 6.859420 ATGCTAATCACATAATAACACGCA 57.141 33.333 0.00 0.00 0.00 5.24
716 791 9.027202 TCATGCCAAATATAATGCTAATCACAT 57.973 29.630 0.00 0.00 0.00 3.21
717 792 8.406730 TCATGCCAAATATAATGCTAATCACA 57.593 30.769 0.00 0.00 0.00 3.58
718 793 9.695526 TTTCATGCCAAATATAATGCTAATCAC 57.304 29.630 0.00 0.00 0.00 3.06
728 803 9.311916 GTGCAGTTTATTTCATGCCAAATATAA 57.688 29.630 0.00 0.00 37.89 0.98
729 804 7.647318 CGTGCAGTTTATTTCATGCCAAATATA 59.353 33.333 0.00 0.00 37.89 0.86
730 805 6.476380 CGTGCAGTTTATTTCATGCCAAATAT 59.524 34.615 0.00 0.00 37.89 1.28
731 806 5.804473 CGTGCAGTTTATTTCATGCCAAATA 59.196 36.000 0.00 0.00 37.89 1.40
732 807 4.626604 CGTGCAGTTTATTTCATGCCAAAT 59.373 37.500 0.00 0.00 37.89 2.32
733 808 3.986572 CGTGCAGTTTATTTCATGCCAAA 59.013 39.130 0.00 0.00 37.89 3.28
734 809 3.573598 CGTGCAGTTTATTTCATGCCAA 58.426 40.909 0.00 0.00 37.89 4.52
735 810 2.670789 GCGTGCAGTTTATTTCATGCCA 60.671 45.455 0.00 0.00 37.89 4.92
736 811 1.919918 GCGTGCAGTTTATTTCATGCC 59.080 47.619 0.00 0.00 37.89 4.40
737 812 2.867429 AGCGTGCAGTTTATTTCATGC 58.133 42.857 0.00 0.00 40.63 4.06
738 813 4.491942 CGTTAGCGTGCAGTTTATTTCATG 59.508 41.667 0.00 0.00 0.00 3.07
739 814 4.647964 CGTTAGCGTGCAGTTTATTTCAT 58.352 39.130 0.00 0.00 0.00 2.57
740 815 4.060288 CGTTAGCGTGCAGTTTATTTCA 57.940 40.909 0.00 0.00 0.00 2.69
755 830 1.416434 GAGCGCTCAACACGTTAGC 59.584 57.895 31.91 0.00 0.00 3.09
756 831 0.728129 TCGAGCGCTCAACACGTTAG 60.728 55.000 34.69 16.44 0.00 2.34
757 832 1.000233 GTCGAGCGCTCAACACGTTA 61.000 55.000 34.69 5.52 0.00 3.18
758 833 2.027024 TCGAGCGCTCAACACGTT 59.973 55.556 34.69 0.00 0.00 3.99
759 834 2.729862 GTCGAGCGCTCAACACGT 60.730 61.111 34.69 0.00 0.00 4.49
760 835 1.617755 AATGTCGAGCGCTCAACACG 61.618 55.000 31.93 20.44 0.00 4.49
761 836 1.346365 TAATGTCGAGCGCTCAACAC 58.654 50.000 31.93 24.81 0.00 3.32
762 837 2.073117 TTAATGTCGAGCGCTCAACA 57.927 45.000 31.47 31.47 0.00 3.33
763 838 2.784665 GCTTTAATGTCGAGCGCTCAAC 60.785 50.000 34.69 28.50 0.00 3.18
764 839 1.393539 GCTTTAATGTCGAGCGCTCAA 59.606 47.619 34.69 17.41 0.00 3.02
765 840 0.999406 GCTTTAATGTCGAGCGCTCA 59.001 50.000 34.69 18.66 0.00 4.26
766 841 0.999406 TGCTTTAATGTCGAGCGCTC 59.001 50.000 27.64 27.64 39.23 5.03
767 842 1.002366 CTGCTTTAATGTCGAGCGCT 58.998 50.000 11.27 11.27 39.23 5.92
768 843 0.721718 ACTGCTTTAATGTCGAGCGC 59.278 50.000 0.00 0.00 39.23 5.92
769 844 2.263077 AGACTGCTTTAATGTCGAGCG 58.737 47.619 0.00 0.00 39.23 5.03
770 845 3.799420 CCTAGACTGCTTTAATGTCGAGC 59.201 47.826 0.00 0.00 33.95 5.03
771 846 5.000012 ACCTAGACTGCTTTAATGTCGAG 58.000 43.478 0.00 0.00 36.01 4.04
772 847 4.438336 CGACCTAGACTGCTTTAATGTCGA 60.438 45.833 0.00 0.00 44.03 4.20
773 848 3.791887 CGACCTAGACTGCTTTAATGTCG 59.208 47.826 0.00 0.00 37.37 4.35
774 849 4.745649 ACGACCTAGACTGCTTTAATGTC 58.254 43.478 0.00 0.00 0.00 3.06
775 850 4.803098 ACGACCTAGACTGCTTTAATGT 57.197 40.909 0.00 0.00 0.00 2.71
776 851 4.330074 CCAACGACCTAGACTGCTTTAATG 59.670 45.833 0.00 0.00 0.00 1.90
777 852 4.222145 TCCAACGACCTAGACTGCTTTAAT 59.778 41.667 0.00 0.00 0.00 1.40
778 853 3.575256 TCCAACGACCTAGACTGCTTTAA 59.425 43.478 0.00 0.00 0.00 1.52
779 854 3.159472 TCCAACGACCTAGACTGCTTTA 58.841 45.455 0.00 0.00 0.00 1.85
780 855 1.968493 TCCAACGACCTAGACTGCTTT 59.032 47.619 0.00 0.00 0.00 3.51
781 856 1.629043 TCCAACGACCTAGACTGCTT 58.371 50.000 0.00 0.00 0.00 3.91
782 857 1.853963 ATCCAACGACCTAGACTGCT 58.146 50.000 0.00 0.00 0.00 4.24
783 858 2.674796 AATCCAACGACCTAGACTGC 57.325 50.000 0.00 0.00 0.00 4.40
784 859 5.068234 TGTTAATCCAACGACCTAGACTG 57.932 43.478 0.00 0.00 40.26 3.51
785 860 5.421056 TCATGTTAATCCAACGACCTAGACT 59.579 40.000 0.00 0.00 40.26 3.24
786 861 5.657474 TCATGTTAATCCAACGACCTAGAC 58.343 41.667 0.00 0.00 40.26 2.59
787 862 5.925506 TCATGTTAATCCAACGACCTAGA 57.074 39.130 0.00 0.00 40.26 2.43
788 863 7.279981 TCAAATCATGTTAATCCAACGACCTAG 59.720 37.037 0.00 0.00 40.26 3.02
789 864 7.106890 TCAAATCATGTTAATCCAACGACCTA 58.893 34.615 0.00 0.00 40.26 3.08
790 865 5.943416 TCAAATCATGTTAATCCAACGACCT 59.057 36.000 0.00 0.00 40.26 3.85
791 866 6.189677 TCAAATCATGTTAATCCAACGACC 57.810 37.500 0.00 0.00 40.26 4.79
792 867 6.692681 CCATCAAATCATGTTAATCCAACGAC 59.307 38.462 0.00 0.00 40.26 4.34
793 868 6.376864 ACCATCAAATCATGTTAATCCAACGA 59.623 34.615 0.00 0.00 40.26 3.85
794 869 6.563422 ACCATCAAATCATGTTAATCCAACG 58.437 36.000 0.00 0.00 40.26 4.10
795 870 6.692681 CGACCATCAAATCATGTTAATCCAAC 59.307 38.462 0.00 0.00 37.67 3.77
796 871 6.601217 TCGACCATCAAATCATGTTAATCCAA 59.399 34.615 0.00 0.00 0.00 3.53
797 872 6.118852 TCGACCATCAAATCATGTTAATCCA 58.881 36.000 0.00 0.00 0.00 3.41
798 873 6.483307 TCTCGACCATCAAATCATGTTAATCC 59.517 38.462 0.00 0.00 0.00 3.01
799 874 7.482654 TCTCGACCATCAAATCATGTTAATC 57.517 36.000 0.00 0.00 0.00 1.75
800 875 8.455903 AATCTCGACCATCAAATCATGTTAAT 57.544 30.769 0.00 0.00 0.00 1.40
801 876 7.864108 AATCTCGACCATCAAATCATGTTAA 57.136 32.000 0.00 0.00 0.00 2.01
802 877 8.956533 TTAATCTCGACCATCAAATCATGTTA 57.043 30.769 0.00 0.00 0.00 2.41
803 878 7.864108 TTAATCTCGACCATCAAATCATGTT 57.136 32.000 0.00 0.00 0.00 2.71
804 879 8.455903 AATTAATCTCGACCATCAAATCATGT 57.544 30.769 0.00 0.00 0.00 3.21
813 888 9.968870 GGGTATATCTAATTAATCTCGACCATC 57.031 37.037 0.00 0.00 0.00 3.51
814 889 9.716556 AGGGTATATCTAATTAATCTCGACCAT 57.283 33.333 0.00 0.00 0.00 3.55
815 890 9.543231 AAGGGTATATCTAATTAATCTCGACCA 57.457 33.333 0.00 0.00 0.00 4.02
835 910 9.816787 ACCAATATAAAAAGACTCAAAAGGGTA 57.183 29.630 0.00 0.00 0.00 3.69
836 911 8.721133 ACCAATATAAAAAGACTCAAAAGGGT 57.279 30.769 0.00 0.00 0.00 4.34
861 936 9.841880 GCGTCAGTGAGTAAATCTATATCAATA 57.158 33.333 0.00 0.00 0.00 1.90
862 937 8.360390 TGCGTCAGTGAGTAAATCTATATCAAT 58.640 33.333 0.00 0.00 0.00 2.57
863 938 7.712797 TGCGTCAGTGAGTAAATCTATATCAA 58.287 34.615 0.00 0.00 0.00 2.57
864 939 7.272037 TGCGTCAGTGAGTAAATCTATATCA 57.728 36.000 0.00 0.00 0.00 2.15
865 940 8.076781 TCTTGCGTCAGTGAGTAAATCTATATC 58.923 37.037 0.00 0.00 0.00 1.63
866 941 7.941919 TCTTGCGTCAGTGAGTAAATCTATAT 58.058 34.615 0.00 0.00 0.00 0.86
867 942 7.329588 TCTTGCGTCAGTGAGTAAATCTATA 57.670 36.000 0.00 0.00 0.00 1.31
868 943 6.208988 TCTTGCGTCAGTGAGTAAATCTAT 57.791 37.500 0.00 0.00 0.00 1.98
869 944 5.638596 TCTTGCGTCAGTGAGTAAATCTA 57.361 39.130 0.00 0.00 0.00 1.98
870 945 4.521130 TCTTGCGTCAGTGAGTAAATCT 57.479 40.909 0.00 0.00 0.00 2.40
871 946 5.578727 AGATTCTTGCGTCAGTGAGTAAATC 59.421 40.000 0.00 0.00 0.00 2.17
923 998 1.002251 TGATTTGACAACGCCGGAAAC 60.002 47.619 5.05 0.00 0.00 2.78
924 999 1.309950 TGATTTGACAACGCCGGAAA 58.690 45.000 5.05 0.00 0.00 3.13
925 1000 1.466950 GATGATTTGACAACGCCGGAA 59.533 47.619 5.05 0.00 0.00 4.30
930 1005 4.585364 CATGAGAGATGATTTGACAACGC 58.415 43.478 0.00 0.00 0.00 4.84
933 1008 3.949754 GGGCATGAGAGATGATTTGACAA 59.050 43.478 0.00 0.00 0.00 3.18
934 1009 3.548770 GGGCATGAGAGATGATTTGACA 58.451 45.455 0.00 0.00 0.00 3.58
951 1028 2.897326 AGATACATGCTATACACGGGCA 59.103 45.455 0.00 0.00 40.32 5.36
952 1029 3.254060 CAGATACATGCTATACACGGGC 58.746 50.000 0.00 0.00 0.00 6.13
966 1080 5.345702 GCGTGGTAATAAGTGACAGATACA 58.654 41.667 0.00 0.00 0.00 2.29
968 1082 4.498513 CCGCGTGGTAATAAGTGACAGATA 60.499 45.833 6.91 0.00 0.00 1.98
978 1092 2.371902 GCGTTCCGCGTGGTAATAA 58.628 52.632 16.01 0.00 44.55 1.40
1013 1132 3.876589 GAGCACGGCCGAGGAACAA 62.877 63.158 35.90 0.00 0.00 2.83
1286 1405 9.334947 AGGAGATGTATTGACAAATGACAATAG 57.665 33.333 15.27 0.00 40.99 1.73
1292 1411 8.514594 GTCAAAAGGAGATGTATTGACAAATGA 58.485 33.333 10.98 0.00 45.63 2.57
1300 1419 5.088739 GCGTTGTCAAAAGGAGATGTATTG 58.911 41.667 0.00 0.00 0.00 1.90
1310 1432 1.852067 CTCCCGGCGTTGTCAAAAGG 61.852 60.000 6.01 0.00 0.00 3.11
1440 1565 6.664816 AGGCTCACATCATTTTTCTAATTCCA 59.335 34.615 0.00 0.00 0.00 3.53
1459 1584 2.614259 AGAACAGAGGAAGAAGGCTCA 58.386 47.619 0.00 0.00 0.00 4.26
1554 1787 8.845413 TGAATAATTAATAAAATGGGCATGCC 57.155 30.769 29.47 29.47 0.00 4.40
1666 1912 1.822186 GTATGCGGCCCCGACAATT 60.822 57.895 11.48 0.00 42.83 2.32
1725 1971 1.531739 GGCAATTCGGCTTGGTTGGA 61.532 55.000 0.00 0.00 37.17 3.53
1810 2060 0.806102 CGATGAAAGACGGTGGCGAT 60.806 55.000 0.00 0.00 0.00 4.58
1852 2102 2.114670 CCGGCAAGGTCGATGCATT 61.115 57.895 11.32 0.00 45.60 3.56
1883 2135 2.527123 TCGGGGGTTGTAGTGGCA 60.527 61.111 0.00 0.00 0.00 4.92
1893 2145 3.932483 GGTGACGTTGTCGGGGGT 61.932 66.667 0.00 0.00 41.85 4.95
1895 2147 1.666872 GAAGGTGACGTTGTCGGGG 60.667 63.158 0.00 0.00 41.85 5.73
1898 2150 1.001048 TGTAGGAAGGTGACGTTGTCG 60.001 52.381 0.00 0.00 43.34 4.35
1969 2221 1.659098 CATTAACGAAGTGGCGTCTCC 59.341 52.381 0.00 0.00 45.00 3.71
1975 2227 2.161410 TGTGATGCATTAACGAAGTGGC 59.839 45.455 0.00 0.00 45.00 5.01
1980 2232 3.342377 TCCCTGTGATGCATTAACGAA 57.658 42.857 0.00 0.00 0.00 3.85
2031 2283 0.760567 TGTGCATAGGCTCGAGGGAT 60.761 55.000 15.58 0.00 41.91 3.85
2091 2346 0.808453 AATGGTTCGTATGACGGCGG 60.808 55.000 13.24 0.00 42.81 6.13
2172 2436 7.915293 TTATAATAATGGAAGTATGCGTGGG 57.085 36.000 0.00 0.00 0.00 4.61
2193 2457 4.816385 CCGTGATCCATGCACTAGTTTTAT 59.184 41.667 0.00 0.00 34.18 1.40
2261 2526 1.227380 GGATGTAGCTCCGCCACTG 60.227 63.158 0.00 0.00 0.00 3.66
2262 2527 1.685765 TGGATGTAGCTCCGCCACT 60.686 57.895 0.00 0.00 38.21 4.00
2263 2528 1.521681 GTGGATGTAGCTCCGCCAC 60.522 63.158 10.84 10.84 41.77 5.01
2264 2529 1.337384 ATGTGGATGTAGCTCCGCCA 61.337 55.000 0.00 0.00 43.79 5.69
2265 2530 0.882042 CATGTGGATGTAGCTCCGCC 60.882 60.000 0.00 0.00 43.79 6.13
2266 2531 0.179073 ACATGTGGATGTAGCTCCGC 60.179 55.000 0.00 0.00 41.27 5.54
2267 2532 2.315925 AACATGTGGATGTAGCTCCG 57.684 50.000 0.00 0.00 42.30 4.63
2268 2533 2.684881 CCAAACATGTGGATGTAGCTCC 59.315 50.000 0.00 0.00 42.30 4.70
2269 2534 2.684881 CCCAAACATGTGGATGTAGCTC 59.315 50.000 0.00 0.00 42.30 4.09
2270 2535 2.726821 CCCAAACATGTGGATGTAGCT 58.273 47.619 0.00 0.00 42.30 3.32
2271 2536 1.134946 GCCCAAACATGTGGATGTAGC 59.865 52.381 0.00 1.53 42.30 3.58
2272 2537 1.401552 CGCCCAAACATGTGGATGTAG 59.598 52.381 0.00 0.00 42.30 2.74
2273 2538 1.458398 CGCCCAAACATGTGGATGTA 58.542 50.000 0.00 0.00 42.30 2.29
2274 2539 1.250154 CCGCCCAAACATGTGGATGT 61.250 55.000 0.00 0.00 45.24 3.06
2275 2540 1.512230 CCGCCCAAACATGTGGATG 59.488 57.895 0.00 0.00 41.65 3.51
2276 2541 1.682005 CCCGCCCAAACATGTGGAT 60.682 57.895 0.00 0.00 41.65 3.41
2277 2542 2.282816 CCCGCCCAAACATGTGGA 60.283 61.111 0.00 0.00 41.65 4.02
2278 2543 4.067913 GCCCGCCCAAACATGTGG 62.068 66.667 0.00 0.00 38.51 4.17
2279 2544 4.067913 GGCCCGCCCAAACATGTG 62.068 66.667 0.00 0.00 0.00 3.21
2280 2545 4.612279 TGGCCCGCCCAAACATGT 62.612 61.111 0.00 0.00 41.82 3.21
2281 2546 3.762247 CTGGCCCGCCCAAACATG 61.762 66.667 0.00 0.00 44.81 3.21
2284 2549 4.733542 TAGCTGGCCCGCCCAAAC 62.734 66.667 16.38 0.00 44.81 2.93
2285 2550 3.936772 CTTAGCTGGCCCGCCCAAA 62.937 63.158 16.38 7.23 44.81 3.28
2286 2551 4.424711 CTTAGCTGGCCCGCCCAA 62.425 66.667 16.38 9.40 44.81 4.12
2288 2553 2.052047 TTATCTTAGCTGGCCCGCCC 62.052 60.000 16.38 0.00 34.56 6.13
2289 2554 0.179029 TTTATCTTAGCTGGCCCGCC 60.179 55.000 16.38 0.00 0.00 6.13
2290 2555 1.897560 ATTTATCTTAGCTGGCCCGC 58.102 50.000 11.82 11.82 0.00 6.13
2291 2556 6.092259 GTGTAATATTTATCTTAGCTGGCCCG 59.908 42.308 0.00 0.00 0.00 6.13
2292 2557 7.168905 AGTGTAATATTTATCTTAGCTGGCCC 58.831 38.462 0.00 0.00 0.00 5.80
2293 2558 9.892130 ATAGTGTAATATTTATCTTAGCTGGCC 57.108 33.333 0.00 0.00 0.00 5.36
2330 2595 9.988815 TGCTTAATTTAGACCATAAAAGCAAAA 57.011 25.926 4.10 0.00 36.72 2.44
2331 2596 9.418045 GTGCTTAATTTAGACCATAAAAGCAAA 57.582 29.630 7.88 0.00 40.57 3.68
2332 2597 8.032451 GGTGCTTAATTTAGACCATAAAAGCAA 58.968 33.333 7.88 0.00 40.57 3.91
2333 2598 7.177568 TGGTGCTTAATTTAGACCATAAAAGCA 59.822 33.333 10.02 2.53 37.23 3.91
2334 2599 7.543756 TGGTGCTTAATTTAGACCATAAAAGC 58.456 34.615 10.02 0.00 31.64 3.51
2335 2600 8.739972 ACTGGTGCTTAATTTAGACCATAAAAG 58.260 33.333 12.86 6.84 36.14 2.27
2336 2601 8.644374 ACTGGTGCTTAATTTAGACCATAAAA 57.356 30.769 12.86 0.00 36.14 1.52
2337 2602 8.107095 AGACTGGTGCTTAATTTAGACCATAAA 58.893 33.333 12.86 0.00 36.14 1.40
2338 2603 7.630082 AGACTGGTGCTTAATTTAGACCATAA 58.370 34.615 12.86 0.00 36.14 1.90
2339 2604 7.195374 AGACTGGTGCTTAATTTAGACCATA 57.805 36.000 12.86 0.00 36.14 2.74
2340 2605 6.067217 AGACTGGTGCTTAATTTAGACCAT 57.933 37.500 12.86 6.83 36.14 3.55
2341 2606 5.499004 AGACTGGTGCTTAATTTAGACCA 57.501 39.130 12.24 12.24 35.41 4.02
2342 2607 5.938125 TGAAGACTGGTGCTTAATTTAGACC 59.062 40.000 0.00 1.62 0.00 3.85
2343 2608 6.651225 AGTGAAGACTGGTGCTTAATTTAGAC 59.349 38.462 0.00 0.00 0.00 2.59
2344 2609 6.769512 AGTGAAGACTGGTGCTTAATTTAGA 58.230 36.000 0.00 0.00 0.00 2.10
2345 2610 8.547967 TTAGTGAAGACTGGTGCTTAATTTAG 57.452 34.615 0.00 0.00 33.21 1.85
2346 2611 8.780249 GTTTAGTGAAGACTGGTGCTTAATTTA 58.220 33.333 0.00 0.00 33.21 1.40
2347 2612 7.502561 AGTTTAGTGAAGACTGGTGCTTAATTT 59.497 33.333 0.00 0.00 33.21 1.82
2348 2613 6.998673 AGTTTAGTGAAGACTGGTGCTTAATT 59.001 34.615 0.00 0.00 33.21 1.40
2349 2614 6.534634 AGTTTAGTGAAGACTGGTGCTTAAT 58.465 36.000 0.00 0.00 33.21 1.40
2350 2615 5.925509 AGTTTAGTGAAGACTGGTGCTTAA 58.074 37.500 0.00 0.00 33.21 1.85
2351 2616 5.546621 AGTTTAGTGAAGACTGGTGCTTA 57.453 39.130 0.00 0.00 33.21 3.09
2352 2617 4.423625 AGTTTAGTGAAGACTGGTGCTT 57.576 40.909 0.00 0.00 33.21 3.91
2353 2618 4.423625 AAGTTTAGTGAAGACTGGTGCT 57.576 40.909 0.00 0.00 33.21 4.40
2354 2619 5.758784 ACTAAAGTTTAGTGAAGACTGGTGC 59.241 40.000 24.22 0.00 33.21 5.01
2355 2620 7.494625 TCAACTAAAGTTTAGTGAAGACTGGTG 59.505 37.037 25.25 16.88 35.83 4.17
2356 2621 7.562135 TCAACTAAAGTTTAGTGAAGACTGGT 58.438 34.615 25.25 6.96 35.83 4.00
2357 2622 7.711339 ACTCAACTAAAGTTTAGTGAAGACTGG 59.289 37.037 27.91 18.04 39.99 4.00
2358 2623 8.649973 ACTCAACTAAAGTTTAGTGAAGACTG 57.350 34.615 27.91 21.27 39.99 3.51
2359 2624 9.099454 CAACTCAACTAAAGTTTAGTGAAGACT 57.901 33.333 27.91 18.25 40.42 3.24
2360 2625 8.336080 CCAACTCAACTAAAGTTTAGTGAAGAC 58.664 37.037 27.91 0.00 40.42 3.01
2361 2626 7.497909 CCCAACTCAACTAAAGTTTAGTGAAGA 59.502 37.037 27.91 22.90 40.42 2.87
2362 2627 7.639945 CCCAACTCAACTAAAGTTTAGTGAAG 58.360 38.462 25.25 24.17 40.42 3.02
2363 2628 6.038936 GCCCAACTCAACTAAAGTTTAGTGAA 59.961 38.462 25.25 16.31 40.42 3.18
2364 2629 5.529800 GCCCAACTCAACTAAAGTTTAGTGA 59.470 40.000 25.25 21.28 40.42 3.41
2365 2630 5.560183 CGCCCAACTCAACTAAAGTTTAGTG 60.560 44.000 25.25 18.93 40.42 2.74
2366 2631 4.514066 CGCCCAACTCAACTAAAGTTTAGT 59.486 41.667 20.34 20.34 42.37 2.24
2367 2632 4.083484 CCGCCCAACTCAACTAAAGTTTAG 60.083 45.833 19.07 19.07 34.79 1.85
2368 2633 3.816523 CCGCCCAACTCAACTAAAGTTTA 59.183 43.478 0.00 0.00 34.79 2.01
2369 2634 2.621526 CCGCCCAACTCAACTAAAGTTT 59.378 45.455 0.00 0.00 34.79 2.66
2370 2635 2.227194 CCGCCCAACTCAACTAAAGTT 58.773 47.619 0.00 0.00 37.44 2.66
2371 2636 1.544759 CCCGCCCAACTCAACTAAAGT 60.545 52.381 0.00 0.00 0.00 2.66
2372 2637 1.165270 CCCGCCCAACTCAACTAAAG 58.835 55.000 0.00 0.00 0.00 1.85
2373 2638 0.891904 GCCCGCCCAACTCAACTAAA 60.892 55.000 0.00 0.00 0.00 1.85
2374 2639 1.302993 GCCCGCCCAACTCAACTAA 60.303 57.895 0.00 0.00 0.00 2.24
2375 2640 2.349755 GCCCGCCCAACTCAACTA 59.650 61.111 0.00 0.00 0.00 2.24
2376 2641 4.660938 GGCCCGCCCAACTCAACT 62.661 66.667 0.00 0.00 0.00 3.16
2377 2642 4.966787 TGGCCCGCCCAACTCAAC 62.967 66.667 0.00 0.00 41.82 3.18
2400 2665 0.887387 GCTACGACTGGGCAAAACCA 60.887 55.000 0.00 0.00 42.05 3.67
2401 2666 0.605589 AGCTACGACTGGGCAAAACC 60.606 55.000 0.00 0.00 37.93 3.27
2402 2667 0.796927 GAGCTACGACTGGGCAAAAC 59.203 55.000 0.00 0.00 0.00 2.43
2403 2668 0.321298 GGAGCTACGACTGGGCAAAA 60.321 55.000 0.00 0.00 0.00 2.44
2404 2669 1.295423 GGAGCTACGACTGGGCAAA 59.705 57.895 0.00 0.00 0.00 3.68
2405 2670 2.978824 GGAGCTACGACTGGGCAA 59.021 61.111 0.00 0.00 0.00 4.52
2406 2671 3.449227 CGGAGCTACGACTGGGCA 61.449 66.667 14.92 0.00 35.47 5.36
2421 2686 8.856573 CTCATTTATGATTCAAGCAGTGGCGG 62.857 46.154 0.00 0.00 39.77 6.13
2422 2687 6.010807 CTCATTTATGATTCAAGCAGTGGCG 61.011 44.000 0.00 0.00 39.77 5.69
2423 2688 5.163581 ACTCATTTATGATTCAAGCAGTGGC 60.164 40.000 0.00 0.00 36.02 5.01
2424 2689 6.263344 CACTCATTTATGATTCAAGCAGTGG 58.737 40.000 0.00 0.00 36.02 4.00
2425 2690 5.742453 GCACTCATTTATGATTCAAGCAGTG 59.258 40.000 0.00 0.00 36.02 3.66
2426 2691 5.651139 AGCACTCATTTATGATTCAAGCAGT 59.349 36.000 0.00 0.00 36.02 4.40
2427 2692 6.132791 AGCACTCATTTATGATTCAAGCAG 57.867 37.500 0.00 0.00 36.02 4.24
2428 2693 6.405065 GGAAGCACTCATTTATGATTCAAGCA 60.405 38.462 4.81 0.00 41.83 3.91
2429 2694 5.975939 GGAAGCACTCATTTATGATTCAAGC 59.024 40.000 4.81 0.00 41.83 4.01
2430 2695 7.092137 TGGAAGCACTCATTTATGATTCAAG 57.908 36.000 4.81 0.00 41.83 3.02
2431 2696 7.465353 TTGGAAGCACTCATTTATGATTCAA 57.535 32.000 4.81 0.00 41.83 2.69
2432 2697 7.465353 TTTGGAAGCACTCATTTATGATTCA 57.535 32.000 4.81 0.00 41.83 2.57
2436 2701 9.806203 CAATTATTTGGAAGCACTCATTTATGA 57.194 29.630 0.00 0.00 35.16 2.15
2437 2702 8.545420 GCAATTATTTGGAAGCACTCATTTATG 58.455 33.333 0.00 0.00 33.22 1.90
2470 2735 7.277981 CGTTACTTCTTCATTGCCAGTTAGTAT 59.722 37.037 0.00 0.00 0.00 2.12
2482 2747 6.425721 TCGAATTTCCACGTTACTTCTTCATT 59.574 34.615 0.00 0.00 0.00 2.57
2483 2748 5.929992 TCGAATTTCCACGTTACTTCTTCAT 59.070 36.000 0.00 0.00 0.00 2.57
2484 2749 5.291178 TCGAATTTCCACGTTACTTCTTCA 58.709 37.500 0.00 0.00 0.00 3.02
2490 2755 3.596214 AGCATCGAATTTCCACGTTACT 58.404 40.909 0.00 0.00 0.00 2.24
2491 2756 4.336532 AAGCATCGAATTTCCACGTTAC 57.663 40.909 0.00 0.00 0.00 2.50
2514 2780 9.910267 AGTAAAAAGAAACAAAGGGAGTAGTTA 57.090 29.630 0.00 0.00 0.00 2.24
2522 2788 5.901552 TGCAGAGTAAAAAGAAACAAAGGG 58.098 37.500 0.00 0.00 0.00 3.95
2692 2958 6.756074 CAGCAGGTCAAATTTCACAAAGTTTA 59.244 34.615 0.00 0.00 0.00 2.01
2716 2982 4.623932 ACTCTTCATGTAGGCTTTGTCA 57.376 40.909 0.00 0.00 0.00 3.58
2794 3061 9.359653 CTAGGGACTCATAAAATGGATTGAATT 57.640 33.333 0.00 0.00 41.75 2.17
2930 3197 7.771183 TGGAGGTTGTTGCTCATAATAAAATC 58.229 34.615 0.00 0.00 0.00 2.17
3095 3755 5.738619 AATTCCAAATAAACCCCTGTCAC 57.261 39.130 0.00 0.00 0.00 3.67
3096 3756 6.755542 AAAATTCCAAATAAACCCCTGTCA 57.244 33.333 0.00 0.00 0.00 3.58
3165 3838 5.331876 TGTTCGAAAAATGACAGGGTTTT 57.668 34.783 0.00 0.00 0.00 2.43
3168 3841 3.888930 ACATGTTCGAAAAATGACAGGGT 59.111 39.130 22.39 7.67 0.00 4.34
3465 4222 3.473625 TCATGCACTCTGCTATGATTGG 58.526 45.455 0.00 0.00 45.31 3.16
3489 4246 4.021016 ACTGAAGATCTACGAAAGGTGCTT 60.021 41.667 0.00 0.00 0.00 3.91
3500 4257 7.708322 TGTGATTGCTCATAACTGAAGATCTAC 59.292 37.037 0.00 0.00 32.98 2.59
3519 4276 7.096023 GCGTATAGTGTTCTAGGATTGTGATTG 60.096 40.741 0.00 0.00 0.00 2.67
3532 4332 4.827692 TCACATTTGGCGTATAGTGTTCT 58.172 39.130 0.00 0.00 0.00 3.01
3632 4433 2.092968 AGTTGAGGTCACAAGCTTGTCA 60.093 45.455 28.97 19.89 39.91 3.58
3774 4576 2.349590 TGATGGTTTGATCAGCTCGTG 58.650 47.619 0.00 0.00 0.00 4.35
3788 4590 7.981789 CACAGTTTAGTGTATGACTATGATGGT 59.018 37.037 0.00 0.00 37.01 3.55
4075 4882 4.992688 TGAAAAGTTGGACATGAACACAC 58.007 39.130 0.00 0.07 0.00 3.82
4314 5139 4.823989 AGAAACTTCAAGTGGGACATTCAG 59.176 41.667 0.00 0.00 44.52 3.02
4336 5161 3.876320 GCCTTTTGGATCTCTAGCTTCAG 59.124 47.826 0.00 0.00 44.07 3.02
4467 5296 5.764686 TGGTTCATAAGGATCATCAATTCCG 59.235 40.000 0.00 0.00 37.10 4.30
4592 5421 9.944376 GAATACCCATCATTATTGAACTAGCTA 57.056 33.333 0.00 0.00 34.96 3.32
4593 5422 8.439971 TGAATACCCATCATTATTGAACTAGCT 58.560 33.333 0.00 0.00 34.96 3.32
4594 5423 8.621532 TGAATACCCATCATTATTGAACTAGC 57.378 34.615 0.00 0.00 34.96 3.42
4669 5498 1.671054 GGCGCAGTCACCAGCTTTA 60.671 57.895 10.83 0.00 0.00 1.85
4754 5583 3.907894 TTTTGTCCATAGCAAACGTCC 57.092 42.857 0.00 0.00 35.82 4.79
4787 5617 1.212688 TCACATTCCTTGGCGATCCAT 59.787 47.619 0.00 0.00 43.05 3.41
4902 5749 3.254166 ACACATGAGTCATTCTTGTTGCC 59.746 43.478 1.86 0.00 40.94 4.52
4920 5767 0.750911 TCAATGCACACAGCCACACA 60.751 50.000 0.00 0.00 44.83 3.72
4943 5790 1.999568 GTACCCCTTCCCCTCCCAC 61.000 68.421 0.00 0.00 0.00 4.61
4963 5810 4.574599 AGAACTTCACAAAATGCAGGTC 57.425 40.909 0.00 0.00 38.47 3.85
4977 5825 4.585955 TCCTGTGTGTGTCTAGAACTTC 57.414 45.455 0.00 0.00 0.00 3.01
4986 5834 7.027778 AGAAATAGTTTTTCCTGTGTGTGTC 57.972 36.000 2.82 0.00 0.00 3.67
5028 5876 3.565902 GCTAATCAGGCTGGGTACATTTC 59.434 47.826 15.73 0.00 0.00 2.17
5230 6082 9.597999 GCCAAATTGACTTTTTGTTATCAATTC 57.402 29.630 10.53 0.00 46.14 2.17
5314 6169 4.666618 GCGAGAATTTCTTAAGCGCATTAC 59.333 41.667 19.39 0.00 42.21 1.89
5414 6270 2.440517 TGCTTGTGCATGATGGGTAT 57.559 45.000 0.00 0.00 45.31 2.73
5485 6341 5.781306 TGGTTTGTACACTGAGTATTCCCTA 59.219 40.000 0.00 0.00 34.67 3.53
5588 6444 4.021016 CCTTATATCAAGGAACGGAGGGAG 60.021 50.000 0.00 0.00 39.81 4.30
5589 6445 3.901844 CCTTATATCAAGGAACGGAGGGA 59.098 47.826 0.00 0.00 39.81 4.20
5590 6446 3.646637 ACCTTATATCAAGGAACGGAGGG 59.353 47.826 9.96 0.00 39.81 4.30
5591 6447 4.101119 ACACCTTATATCAAGGAACGGAGG 59.899 45.833 9.96 0.00 39.81 4.30
5592 6448 5.277857 ACACCTTATATCAAGGAACGGAG 57.722 43.478 9.96 0.00 39.81 4.63
5593 6449 6.989155 ATACACCTTATATCAAGGAACGGA 57.011 37.500 9.96 0.00 39.81 4.69
5594 6450 8.118976 TCTATACACCTTATATCAAGGAACGG 57.881 38.462 9.96 0.05 39.81 4.44
5629 6485 7.977293 GCAATACACCTTATATTTCGGGTTTTT 59.023 33.333 0.00 0.00 0.00 1.94
5630 6486 7.122948 TGCAATACACCTTATATTTCGGGTTTT 59.877 33.333 0.00 0.00 0.00 2.43
5631 6487 6.603997 TGCAATACACCTTATATTTCGGGTTT 59.396 34.615 0.00 0.00 0.00 3.27
5632 6488 6.123651 TGCAATACACCTTATATTTCGGGTT 58.876 36.000 0.00 0.00 0.00 4.11
5633 6489 5.686753 TGCAATACACCTTATATTTCGGGT 58.313 37.500 0.00 0.00 0.00 5.28
5634 6490 6.817765 ATGCAATACACCTTATATTTCGGG 57.182 37.500 0.00 0.00 0.00 5.14
5635 6491 6.582295 GCAATGCAATACACCTTATATTTCGG 59.418 38.462 0.00 0.00 0.00 4.30
5636 6492 7.113404 GTGCAATGCAATACACCTTATATTTCG 59.887 37.037 10.44 0.00 41.47 3.46
5637 6493 7.382218 GGTGCAATGCAATACACCTTATATTTC 59.618 37.037 21.68 0.00 45.41 2.17
5638 6494 7.209475 GGTGCAATGCAATACACCTTATATTT 58.791 34.615 21.68 0.00 45.41 1.40
5639 6495 6.748132 GGTGCAATGCAATACACCTTATATT 58.252 36.000 21.68 0.00 45.41 1.28
5640 6496 6.331369 GGTGCAATGCAATACACCTTATAT 57.669 37.500 21.68 0.00 45.41 0.86
5641 6497 5.766150 GGTGCAATGCAATACACCTTATA 57.234 39.130 21.68 0.00 45.41 0.98
5642 6498 4.654091 GGTGCAATGCAATACACCTTAT 57.346 40.909 21.68 0.00 45.41 1.73
5647 6503 2.728846 CGAGTGGTGCAATGCAATACAC 60.729 50.000 22.70 22.70 41.47 2.90
5648 6504 1.468127 CGAGTGGTGCAATGCAATACA 59.532 47.619 10.44 6.97 41.47 2.29
5649 6505 1.468520 ACGAGTGGTGCAATGCAATAC 59.531 47.619 10.44 12.14 41.47 1.89
5650 6506 1.819928 ACGAGTGGTGCAATGCAATA 58.180 45.000 10.44 0.00 41.47 1.90
5651 6507 0.961019 AACGAGTGGTGCAATGCAAT 59.039 45.000 10.44 0.00 41.47 3.56
5652 6508 0.743688 AAACGAGTGGTGCAATGCAA 59.256 45.000 10.44 0.00 41.47 4.08
5653 6509 0.030504 CAAACGAGTGGTGCAATGCA 59.969 50.000 2.72 2.72 35.60 3.96
5654 6510 0.664166 CCAAACGAGTGGTGCAATGC 60.664 55.000 0.00 0.00 33.63 3.56
5655 6511 0.950836 TCCAAACGAGTGGTGCAATG 59.049 50.000 8.62 0.00 39.88 2.82
5656 6512 1.909700 ATCCAAACGAGTGGTGCAAT 58.090 45.000 8.62 0.00 39.88 3.56
5657 6513 2.552599 TATCCAAACGAGTGGTGCAA 57.447 45.000 8.62 0.00 39.88 4.08
5658 6514 2.552599 TTATCCAAACGAGTGGTGCA 57.447 45.000 8.62 0.00 39.88 4.57
5659 6515 4.434713 AAATTATCCAAACGAGTGGTGC 57.565 40.909 8.62 0.00 39.88 5.01
5679 6535 8.879227 AGGAAATGTAATCAAATCCCTGAAAAA 58.121 29.630 0.00 0.00 34.79 1.94
5680 6536 8.434589 AGGAAATGTAATCAAATCCCTGAAAA 57.565 30.769 0.00 0.00 34.79 2.29
5681 6537 8.434589 AAGGAAATGTAATCAAATCCCTGAAA 57.565 30.769 0.00 0.00 34.79 2.69
5682 6538 9.713684 ATAAGGAAATGTAATCAAATCCCTGAA 57.286 29.630 0.00 0.00 34.79 3.02
5696 6552 9.959721 GGAGATTGCCTAATATAAGGAAATGTA 57.040 33.333 1.83 0.00 43.86 2.29
5697 6553 8.673251 AGGAGATTGCCTAATATAAGGAAATGT 58.327 33.333 1.83 0.00 43.86 2.71
5698 6554 9.171877 GAGGAGATTGCCTAATATAAGGAAATG 57.828 37.037 1.83 0.00 43.86 2.32
5699 6555 9.121806 AGAGGAGATTGCCTAATATAAGGAAAT 57.878 33.333 0.00 0.00 46.11 2.17
5700 6556 8.511748 AGAGGAGATTGCCTAATATAAGGAAA 57.488 34.615 0.00 0.00 38.61 3.13
5701 6557 9.790297 ATAGAGGAGATTGCCTAATATAAGGAA 57.210 33.333 0.00 0.00 38.73 3.36
5702 6558 9.206690 CATAGAGGAGATTGCCTAATATAAGGA 57.793 37.037 0.00 0.00 38.73 3.36
5703 6559 8.986991 ACATAGAGGAGATTGCCTAATATAAGG 58.013 37.037 0.00 0.00 38.73 2.69
5706 6562 9.775539 AGAACATAGAGGAGATTGCCTAATATA 57.224 33.333 0.00 0.00 38.73 0.86
5707 6563 8.677870 AGAACATAGAGGAGATTGCCTAATAT 57.322 34.615 0.00 0.00 38.73 1.28
5708 6564 7.730332 TGAGAACATAGAGGAGATTGCCTAATA 59.270 37.037 0.00 0.00 38.73 0.98
5709 6565 6.556495 TGAGAACATAGAGGAGATTGCCTAAT 59.444 38.462 0.00 0.00 38.73 1.73
5710 6566 5.899547 TGAGAACATAGAGGAGATTGCCTAA 59.100 40.000 0.00 0.00 38.73 2.69
5711 6567 5.458595 TGAGAACATAGAGGAGATTGCCTA 58.541 41.667 0.00 0.00 38.73 3.93
5712 6568 4.293494 TGAGAACATAGAGGAGATTGCCT 58.707 43.478 0.00 0.00 42.17 4.75
5713 6569 4.679373 TGAGAACATAGAGGAGATTGCC 57.321 45.455 0.00 0.00 0.00 4.52
5714 6570 4.451774 GCATGAGAACATAGAGGAGATTGC 59.548 45.833 0.00 0.00 35.09 3.56
5715 6571 4.996122 GGCATGAGAACATAGAGGAGATTG 59.004 45.833 0.00 0.00 35.09 2.67
5716 6572 4.657504 TGGCATGAGAACATAGAGGAGATT 59.342 41.667 0.00 0.00 35.09 2.40
5717 6573 4.229639 TGGCATGAGAACATAGAGGAGAT 58.770 43.478 0.00 0.00 35.09 2.75
5718 6574 3.646534 TGGCATGAGAACATAGAGGAGA 58.353 45.455 0.00 0.00 35.09 3.71
5719 6575 4.412796 TTGGCATGAGAACATAGAGGAG 57.587 45.455 0.00 0.00 35.09 3.69
5720 6576 5.378230 AATTGGCATGAGAACATAGAGGA 57.622 39.130 0.00 0.00 35.09 3.71
5721 6577 6.294473 ACTAATTGGCATGAGAACATAGAGG 58.706 40.000 0.00 0.00 35.09 3.69
5722 6578 6.988580 TGACTAATTGGCATGAGAACATAGAG 59.011 38.462 0.00 0.00 35.09 2.43
5723 6579 6.888105 TGACTAATTGGCATGAGAACATAGA 58.112 36.000 0.00 0.00 35.09 1.98
5724 6580 6.204301 CCTGACTAATTGGCATGAGAACATAG 59.796 42.308 0.00 0.00 35.09 2.23
5725 6581 6.057533 CCTGACTAATTGGCATGAGAACATA 58.942 40.000 0.00 0.00 35.09 2.29
5726 6582 4.885907 CCTGACTAATTGGCATGAGAACAT 59.114 41.667 0.00 0.00 37.19 2.71
5727 6583 4.263462 ACCTGACTAATTGGCATGAGAACA 60.263 41.667 0.00 0.00 30.31 3.18
5728 6584 4.095483 CACCTGACTAATTGGCATGAGAAC 59.905 45.833 0.00 0.00 30.31 3.01
5729 6585 4.263462 ACACCTGACTAATTGGCATGAGAA 60.263 41.667 0.00 0.00 30.31 2.87
5730 6586 3.264193 ACACCTGACTAATTGGCATGAGA 59.736 43.478 0.00 0.00 30.31 3.27
5731 6587 3.614092 ACACCTGACTAATTGGCATGAG 58.386 45.455 0.00 0.00 30.31 2.90
5732 6588 3.719268 ACACCTGACTAATTGGCATGA 57.281 42.857 0.00 0.00 30.31 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.