Multiple sequence alignment - TraesCS3B01G078600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G078600 chr3B 100.000 8549 0 0 1 8549 49755487 49746939 0.000000e+00 15788.0
1 TraesCS3B01G078600 chr3B 81.031 485 80 7 1819 2299 262965978 262966454 8.100000e-100 375.0
2 TraesCS3B01G078600 chr3B 90.265 113 9 2 8024 8135 679712770 679712659 6.920000e-31 147.0
3 TraesCS3B01G078600 chr3B 88.889 117 13 0 8024 8140 355452710 355452826 2.490000e-30 145.0
4 TraesCS3B01G078600 chr3B 96.296 81 3 0 7239 7319 49678067 49677987 5.380000e-27 134.0
5 TraesCS3B01G078600 chr3B 86.066 122 16 1 8015 8135 205779484 205779363 6.960000e-26 130.0
6 TraesCS3B01G078600 chr3D 95.369 3412 125 18 3919 7323 29168890 29165505 0.000000e+00 5395.0
7 TraesCS3B01G078600 chr3D 90.154 3961 224 70 1 3903 29173075 29169223 0.000000e+00 5001.0
8 TraesCS3B01G078600 chr3D 90.503 537 43 5 1 530 29174164 29173629 0.000000e+00 702.0
9 TraesCS3B01G078600 chr3D 90.317 537 43 6 1 530 29197290 29196756 0.000000e+00 695.0
10 TraesCS3B01G078600 chr3D 90.130 537 45 5 1 530 29200564 29200029 0.000000e+00 691.0
11 TraesCS3B01G078600 chr3D 89.944 537 46 5 1 530 29195116 29194581 0.000000e+00 686.0
12 TraesCS3B01G078600 chr3D 89.944 537 46 5 1 530 29198385 29197850 0.000000e+00 686.0
13 TraesCS3B01G078600 chr3D 89.796 539 45 6 1 530 29203831 29203294 0.000000e+00 682.0
14 TraesCS3B01G078600 chr3D 89.758 537 47 5 1 530 29184855 29184320 0.000000e+00 680.0
15 TraesCS3B01G078600 chr3D 89.572 537 48 5 1 530 29189612 29189077 0.000000e+00 675.0
16 TraesCS3B01G078600 chr3D 89.572 537 48 5 1 530 29190705 29190170 0.000000e+00 675.0
17 TraesCS3B01G078600 chr3D 80.045 441 81 7 1852 2290 184510784 184511219 3.850000e-83 320.0
18 TraesCS3B01G078600 chr3A 90.262 3964 248 64 1 3894 38399093 38395198 0.000000e+00 5055.0
19 TraesCS3B01G078600 chr3A 93.452 2245 113 19 5083 7323 38393606 38391392 0.000000e+00 3301.0
20 TraesCS3B01G078600 chr3A 97.841 1158 23 1 3931 5088 38394861 38393706 0.000000e+00 1999.0
21 TraesCS3B01G078600 chr3A 89.286 420 31 10 8139 8547 38390416 38390000 1.650000e-141 514.0
22 TraesCS3B01G078600 chr3A 82.234 394 43 13 7322 7699 38390956 38390574 1.790000e-81 315.0
23 TraesCS3B01G078600 chr3A 90.909 165 13 2 7737 7900 726769131 726768968 4.020000e-53 220.0
24 TraesCS3B01G078600 chr3A 92.000 75 6 0 8024 8098 688618015 688617941 1.170000e-18 106.0
25 TraesCS3B01G078600 chr6B 93.038 158 9 1 972 1129 2207855 2208010 6.680000e-56 230.0
26 TraesCS3B01G078600 chr6B 85.714 119 15 2 8024 8141 631288294 631288177 3.240000e-24 124.0
27 TraesCS3B01G078600 chr6D 91.358 162 13 1 7740 7900 351233435 351233596 4.020000e-53 220.0
28 TraesCS3B01G078600 chr6D 91.667 144 11 1 5359 5501 410398275 410398418 1.880000e-46 198.0
29 TraesCS3B01G078600 chr7B 93.103 145 10 0 5362 5506 505937466 505937322 6.720000e-51 213.0
30 TraesCS3B01G078600 chr6A 89.820 167 15 2 7736 7901 297641384 297641219 6.720000e-51 213.0
31 TraesCS3B01G078600 chr6A 84.615 91 11 3 8010 8098 535854783 535854872 4.250000e-13 87.9
32 TraesCS3B01G078600 chr2D 89.474 171 15 3 7740 7908 296364049 296364218 6.720000e-51 213.0
33 TraesCS3B01G078600 chr2D 88.889 171 18 1 7731 7900 299891545 299891715 8.700000e-50 209.0
34 TraesCS3B01G078600 chr2D 92.308 143 11 0 5362 5504 79056319 79056177 4.050000e-48 204.0
35 TraesCS3B01G078600 chr2D 91.071 112 10 0 8024 8135 82103137 82103248 1.490000e-32 152.0
36 TraesCS3B01G078600 chr2D 90.179 112 11 0 8024 8135 619436792 619436903 6.920000e-31 147.0
37 TraesCS3B01G078600 chr2B 89.474 171 15 3 7740 7908 366017679 366017510 6.720000e-51 213.0
38 TraesCS3B01G078600 chr2B 86.047 129 16 2 8017 8144 95798163 95798036 4.160000e-28 137.0
39 TraesCS3B01G078600 chr2B 86.047 129 16 2 8023 8150 104965891 104965764 4.160000e-28 137.0
40 TraesCS3B01G078600 chr4D 89.349 169 17 1 7740 7907 21147732 21147900 2.420000e-50 211.0
41 TraesCS3B01G078600 chr4D 91.667 144 11 1 5362 5504 74079504 74079361 1.880000e-46 198.0
42 TraesCS3B01G078600 chr4B 88.636 176 16 4 7740 7913 28724304 28724131 2.420000e-50 211.0
43 TraesCS3B01G078600 chr4B 90.265 113 9 2 8024 8135 652917818 652917707 6.920000e-31 147.0
44 TraesCS3B01G078600 chr7D 93.525 139 9 0 5362 5500 34756866 34757004 3.130000e-49 207.0
45 TraesCS3B01G078600 chr7D 87.778 180 19 3 7739 7917 199348844 199349021 3.130000e-49 207.0
46 TraesCS3B01G078600 chr5B 91.333 150 13 0 5355 5504 299602216 299602365 1.120000e-48 206.0
47 TraesCS3B01G078600 chr1B 91.892 148 9 1 5362 5506 390622448 390622301 4.050000e-48 204.0
48 TraesCS3B01G078600 chr7A 92.857 112 8 0 8024 8135 200511785 200511896 6.870000e-36 163.0
49 TraesCS3B01G078600 chr7A 86.047 86 12 0 8013 8098 622370035 622370120 9.140000e-15 93.5
50 TraesCS3B01G078600 chr4A 86.154 130 15 3 8023 8151 726293611 726293738 4.160000e-28 137.0
51 TraesCS3B01G078600 chr4A 88.158 76 9 0 8023 8098 449393712 449393637 3.290000e-14 91.6
52 TraesCS3B01G078600 chr1D 89.773 88 9 0 8011 8098 33951198 33951285 7.010000e-21 113.0
53 TraesCS3B01G078600 chr2A 87.952 83 10 0 8015 8097 775184354 775184436 1.960000e-16 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G078600 chr3B 49746939 49755487 8548 True 15788.000000 15788 100.000000 1 8549 1 chr3B.!!$R2 8548
1 TraesCS3B01G078600 chr3D 29165505 29174164 8659 True 3699.333333 5395 92.008667 1 7323 3 chr3D.!!$R2 7322
2 TraesCS3B01G078600 chr3D 29189077 29203831 14754 True 684.285714 695 89.896429 1 530 7 chr3D.!!$R3 529
3 TraesCS3B01G078600 chr3D 29184320 29184855 535 True 680.000000 680 89.758000 1 530 1 chr3D.!!$R1 529
4 TraesCS3B01G078600 chr3A 38390000 38399093 9093 True 2236.800000 5055 90.615000 1 8547 5 chr3A.!!$R3 8546

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
137 142 0.036952 ATGGTCGTGGAGCTTGTGAG 60.037 55.000 0.00 0.00 0.00 3.51 F
281 290 0.110644 CGGCTTCTCGCTTTGTCAAC 60.111 55.000 0.00 0.00 39.13 3.18 F
801 13977 0.319813 TCGTACACGACTCGGTCTCA 60.320 55.000 2.98 0.00 44.22 3.27 F
1542 14722 0.764271 TGACTGGGTGCTGTTCATGA 59.236 50.000 0.00 0.00 0.00 3.07 F
1550 14730 1.198637 GTGCTGTTCATGAGACTTGGC 59.801 52.381 0.00 5.29 0.00 4.52 F
2119 15318 2.037772 TCCTTTCTCCAGAGTGCACTTC 59.962 50.000 22.65 14.01 0.00 3.01 F
3835 17047 1.193323 CTGGCACTCTCTCCATGAGT 58.807 55.000 0.00 0.00 44.62 3.41 F
3914 17128 0.038166 TCTGTTCCTTGACATGCCCC 59.962 55.000 0.00 0.00 0.00 5.80 F
3915 17129 0.967380 CTGTTCCTTGACATGCCCCC 60.967 60.000 0.00 0.00 0.00 5.40 F
4686 18217 1.207488 CCCCACCCAGAGATGAACCA 61.207 60.000 0.00 0.00 0.00 3.67 F
5910 19548 0.679002 TCAGAGCTGCATTGGCTTCC 60.679 55.000 1.02 0.00 40.40 3.46 F
7101 20743 0.315251 GCAAGTTTGGGAAGCAGACC 59.685 55.000 0.00 0.00 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1550 14730 0.865111 TTCGGTGCATCACGACAAAG 59.135 50.000 10.05 0.00 39.04 2.77 R
2014 15212 2.274437 TGCTGATCTCGCTGACAAATC 58.726 47.619 8.62 0.00 0.00 2.17 R
2550 15750 3.038280 CAACCCCTGGTTCCTTCTTTTT 58.962 45.455 0.00 0.00 43.05 1.94 R
2758 15965 3.627577 GTCCATGCTTGTCATTTACCGAT 59.372 43.478 0.00 0.00 31.79 4.18 R
3347 16558 5.879777 TCATCGATACCAAAAGCTGAAATGA 59.120 36.000 0.00 0.00 0.00 2.57 R
3913 17127 4.586841 TCATTTTGTTAGTGTTTCAGGGGG 59.413 41.667 0.00 0.00 0.00 5.40 R
5413 19049 0.439985 CACTCATTTCAGTCCGCGTG 59.560 55.000 4.92 0.00 0.00 5.34 R
5415 19051 1.126846 GTTCACTCATTTCAGTCCGCG 59.873 52.381 0.00 0.00 0.00 6.46 R
5821 19459 2.032071 GTTCCACTCACCCCACCG 59.968 66.667 0.00 0.00 0.00 4.94 R
6549 20191 0.617820 GAGAGTGGGGCCTTACCTGA 60.618 60.000 0.84 0.00 39.10 3.86 R
7189 20831 0.102844 TATACGTTAGCGGGGCACAC 59.897 55.000 3.45 0.00 43.45 3.82 R
8109 22208 0.527113 TCCCGAATTACTTGTCGCGA 59.473 50.000 3.71 3.71 35.93 5.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 29 7.092444 TGTCTTCATGTTATGTAGGGGATCTTT 60.092 37.037 0.00 0.00 0.00 2.52
28 31 5.940617 TCATGTTATGTAGGGGATCTTTGG 58.059 41.667 0.00 0.00 0.00 3.28
54 58 5.416947 GTGTATTTCGGTTGAGTGGATAGT 58.583 41.667 0.00 0.00 0.00 2.12
78 82 2.637872 CCCTTTGTGTCTTGGTCCTCTA 59.362 50.000 0.00 0.00 0.00 2.43
96 100 4.271661 CTCTAACTCCTTCTCTAACCGGT 58.728 47.826 0.00 0.00 0.00 5.28
137 142 0.036952 ATGGTCGTGGAGCTTGTGAG 60.037 55.000 0.00 0.00 0.00 3.51
149 154 3.589988 AGCTTGTGAGTTTATGTCTCCG 58.410 45.455 0.00 0.00 0.00 4.63
164 169 2.280186 CCGCGGATTAGTCTGGCC 60.280 66.667 24.07 0.00 0.00 5.36
194 199 1.519455 GGTCGTCCATGCCTCTTCG 60.519 63.158 0.00 0.00 0.00 3.79
197 202 1.874019 CGTCCATGCCTCTTCGTCG 60.874 63.158 0.00 0.00 0.00 5.12
198 203 2.167861 GTCCATGCCTCTTCGTCGC 61.168 63.158 0.00 0.00 0.00 5.19
264 270 2.261671 CCTTGTGTCTCCGACCGG 59.738 66.667 0.00 0.00 0.00 5.28
267 273 2.436087 CTTGTGTCTCCGACCGGCTT 62.436 60.000 0.00 0.00 34.68 4.35
275 284 2.432628 CGACCGGCTTCTCGCTTT 60.433 61.111 0.00 0.00 39.13 3.51
281 290 0.110644 CGGCTTCTCGCTTTGTCAAC 60.111 55.000 0.00 0.00 39.13 3.18
408 4767 6.280855 TGAAGATGACCTTGTAAGAATCGA 57.719 37.500 0.00 0.00 34.68 3.59
410 4769 6.758416 TGAAGATGACCTTGTAAGAATCGATG 59.242 38.462 0.00 0.00 34.68 3.84
423 5877 8.204160 TGTAAGAATCGATGGACTTTGACATAT 58.796 33.333 14.64 0.00 0.00 1.78
516 7066 3.057526 GTGCCTGGAAAACCTATTCACAC 60.058 47.826 0.00 0.00 0.00 3.82
530 7080 4.836125 ATTCACACCAGTCACATTCAAC 57.164 40.909 0.00 0.00 0.00 3.18
531 7081 3.274095 TCACACCAGTCACATTCAACA 57.726 42.857 0.00 0.00 0.00 3.33
532 7082 3.205338 TCACACCAGTCACATTCAACAG 58.795 45.455 0.00 0.00 0.00 3.16
533 7083 1.949525 ACACCAGTCACATTCAACAGC 59.050 47.619 0.00 0.00 0.00 4.40
534 7084 2.224606 CACCAGTCACATTCAACAGCT 58.775 47.619 0.00 0.00 0.00 4.24
536 7086 2.620115 ACCAGTCACATTCAACAGCTTG 59.380 45.455 0.00 0.00 0.00 4.01
556 7130 0.410270 AAGGTCGTCTTCCTCCTCCT 59.590 55.000 0.00 0.00 33.76 3.69
559 7133 1.391577 GTCGTCTTCCTCCTCCTACC 58.608 60.000 0.00 0.00 0.00 3.18
561 7135 1.569548 TCGTCTTCCTCCTCCTACCAT 59.430 52.381 0.00 0.00 0.00 3.55
565 7139 4.404715 CGTCTTCCTCCTCCTACCATTTTA 59.595 45.833 0.00 0.00 0.00 1.52
569 7143 7.125356 GTCTTCCTCCTCCTACCATTTTACTTA 59.875 40.741 0.00 0.00 0.00 2.24
585 10480 9.277565 CATTTTACTTAACACAAGATCCAATCG 57.722 33.333 0.00 0.00 0.00 3.34
590 10485 3.057969 ACACAAGATCCAATCGAGCAA 57.942 42.857 0.00 0.00 0.00 3.91
594 10489 1.207791 AGATCCAATCGAGCAACCCT 58.792 50.000 0.00 0.00 0.00 4.34
602 10497 1.448985 TCGAGCAACCCTTATGCAAC 58.551 50.000 0.00 0.00 46.22 4.17
607 10502 1.680989 AACCCTTATGCAACCGCCC 60.681 57.895 0.00 0.00 37.32 6.13
610 10505 1.823899 CCTTATGCAACCGCCCTCC 60.824 63.158 0.00 0.00 37.32 4.30
611 10506 2.124901 TTATGCAACCGCCCTCCG 60.125 61.111 0.00 0.00 37.32 4.63
622 13783 3.077556 CCCTCCGACCCAGTCCTG 61.078 72.222 0.00 0.00 0.00 3.86
627 13788 2.989824 CGACCCAGTCCTGACCGT 60.990 66.667 0.00 0.00 0.00 4.83
628 13789 2.657237 GACCCAGTCCTGACCGTG 59.343 66.667 0.00 0.00 0.00 4.94
647 13808 4.699522 GCCTCCACACCCACGGAC 62.700 72.222 0.00 0.00 0.00 4.79
649 13810 2.923035 CTCCACACCCACGGACCT 60.923 66.667 0.00 0.00 0.00 3.85
650 13811 2.920912 TCCACACCCACGGACCTC 60.921 66.667 0.00 0.00 0.00 3.85
652 13813 2.592993 CCACACCCACGGACCTCAT 61.593 63.158 0.00 0.00 0.00 2.90
654 13815 2.184322 CACCCACGGACCTCATCG 59.816 66.667 0.00 0.00 0.00 3.84
712 13873 3.866582 CCCTAAGCTCCGCCCTGG 61.867 72.222 0.00 0.00 40.09 4.45
715 13876 3.391665 CTAAGCTCCGCCCTGGTGG 62.392 68.421 9.60 9.60 46.45 4.61
779 13955 3.288290 CCGTCGGCTATCGCTCCT 61.288 66.667 0.00 0.00 39.05 3.69
797 13973 1.909141 CTGCTCGTACACGACTCGGT 61.909 60.000 2.98 0.95 44.22 4.69
801 13977 0.319813 TCGTACACGACTCGGTCTCA 60.320 55.000 2.98 0.00 44.22 3.27
820 13996 4.907034 CGTGGCCGGATCTCGTCG 62.907 72.222 5.05 0.00 37.11 5.12
823 13999 4.933064 GGCCGGATCTCGTCGCTG 62.933 72.222 5.05 0.00 37.11 5.18
824 14000 4.933064 GCCGGATCTCGTCGCTGG 62.933 72.222 5.05 0.00 37.11 4.85
825 14001 3.518998 CCGGATCTCGTCGCTGGT 61.519 66.667 0.00 0.00 37.11 4.00
826 14002 2.278206 CGGATCTCGTCGCTGGTG 60.278 66.667 0.00 0.00 0.00 4.17
827 14003 2.583593 GGATCTCGTCGCTGGTGC 60.584 66.667 0.00 0.00 0.00 5.01
828 14004 2.492090 GATCTCGTCGCTGGTGCT 59.508 61.111 0.00 0.00 36.97 4.40
829 14005 1.587613 GATCTCGTCGCTGGTGCTC 60.588 63.158 0.00 0.00 36.97 4.26
830 14006 2.945398 GATCTCGTCGCTGGTGCTCC 62.945 65.000 0.00 0.00 36.97 4.70
831 14007 3.753434 CTCGTCGCTGGTGCTCCT 61.753 66.667 6.34 0.00 36.97 3.69
832 14008 3.978723 CTCGTCGCTGGTGCTCCTG 62.979 68.421 6.34 6.85 36.97 3.86
833 14009 4.056125 CGTCGCTGGTGCTCCTGA 62.056 66.667 15.09 3.72 36.97 3.86
834 14010 2.433318 GTCGCTGGTGCTCCTGAC 60.433 66.667 15.09 11.56 36.97 3.51
835 14011 4.056125 TCGCTGGTGCTCCTGACG 62.056 66.667 15.09 15.86 36.97 4.35
836 14012 4.363990 CGCTGGTGCTCCTGACGT 62.364 66.667 15.09 0.00 36.97 4.34
837 14013 2.433318 GCTGGTGCTCCTGACGTC 60.433 66.667 15.09 9.11 35.11 4.34
838 14014 3.051210 CTGGTGCTCCTGACGTCA 58.949 61.111 18.88 18.88 35.11 4.35
850 14026 1.203287 CTGACGTCATCTTCAGCCTCA 59.797 52.381 20.40 0.00 34.20 3.86
878 14054 2.574322 CTTTGCAAAAGATGACCGACG 58.426 47.619 13.84 0.00 0.00 5.12
884 14060 0.949105 AAAGATGACCGACGCCACAC 60.949 55.000 0.00 0.00 0.00 3.82
900 14076 3.529533 CCACACAAAATTTTCAGGCACA 58.470 40.909 0.00 0.00 0.00 4.57
1367 14547 1.376424 CAACATCGTGCAGAGGCCT 60.376 57.895 3.86 3.86 40.13 5.19
1390 14570 1.676635 ACCGCAGCTCTGGTACGTA 60.677 57.895 4.56 0.00 36.50 3.57
1391 14571 1.064296 CCGCAGCTCTGGTACGTAG 59.936 63.158 0.00 0.00 0.00 3.51
1414 14594 1.791662 CGGTGCGCGTTTAGGAATT 59.208 52.632 8.43 0.00 0.00 2.17
1417 14597 1.198178 GGTGCGCGTTTAGGAATTTCA 59.802 47.619 8.43 0.00 0.00 2.69
1421 14601 3.161306 GCGCGTTTAGGAATTTCAACTC 58.839 45.455 8.43 0.00 0.00 3.01
1465 14645 2.041244 GTTTGGATTTCACGTCGTTGC 58.959 47.619 0.00 0.00 0.00 4.17
1468 14648 1.509162 GATTTCACGTCGTTGCGGC 60.509 57.895 0.00 0.00 35.98 6.53
1474 14654 4.409588 CGTCGTTGCGGCTCGTTG 62.410 66.667 14.86 7.57 0.00 4.10
1526 14706 1.579429 GTGGCATTCCGTTGGTGAC 59.421 57.895 0.00 0.00 34.14 3.67
1542 14722 0.764271 TGACTGGGTGCTGTTCATGA 59.236 50.000 0.00 0.00 0.00 3.07
1550 14730 1.198637 GTGCTGTTCATGAGACTTGGC 59.801 52.381 0.00 5.29 0.00 4.52
1732 14926 6.990798 TGCAATGTTCATGGTTTTCTGAATA 58.009 32.000 0.00 0.00 34.18 1.75
1762 14956 8.496707 AAATGGGCATCACTTTATTTTGAATC 57.503 30.769 0.00 0.00 0.00 2.52
1764 14958 6.632909 TGGGCATCACTTTATTTTGAATCAG 58.367 36.000 0.00 0.00 0.00 2.90
1775 14973 9.559958 CTTTATTTTGAATCAGTTATGCTCGTT 57.440 29.630 0.00 0.00 0.00 3.85
2049 15248 6.580041 CGAGATCAGCAAATGGTTTATTATGC 59.420 38.462 0.00 0.00 35.19 3.14
2072 15271 5.743872 GCGTTTTTAGGCTTCAAATGGATAG 59.256 40.000 0.00 0.00 0.00 2.08
2119 15318 2.037772 TCCTTTCTCCAGAGTGCACTTC 59.962 50.000 22.65 14.01 0.00 3.01
2195 15394 8.502387 GCTTGATACTGATCATATTGGAAAGAC 58.498 37.037 0.00 0.00 41.77 3.01
2299 15498 8.801715 TGAGTTGATAAAGAACTTCAAAATGC 57.198 30.769 0.00 0.00 33.71 3.56
2372 15572 9.455847 GGTATTATTTGAATGTTGCAGATTCTC 57.544 33.333 17.00 1.41 32.04 2.87
2550 15750 9.979578 TTTACGTAGTTAGTCCTGTTGAATAAA 57.020 29.630 0.00 0.00 37.78 1.40
2673 15880 2.675844 TGAGTGGAAGTCAAACAACGTG 59.324 45.455 0.00 0.00 44.79 4.49
2674 15881 2.933906 GAGTGGAAGTCAAACAACGTGA 59.066 45.455 0.00 0.00 35.94 4.35
2749 15956 5.764686 TGAACAGAAACAGTGAAGTATGCAT 59.235 36.000 3.79 3.79 0.00 3.96
2750 15957 5.618056 ACAGAAACAGTGAAGTATGCATG 57.382 39.130 10.16 0.00 0.00 4.06
2751 15958 4.456911 ACAGAAACAGTGAAGTATGCATGG 59.543 41.667 10.16 0.00 0.00 3.66
2752 15959 4.696877 CAGAAACAGTGAAGTATGCATGGA 59.303 41.667 10.16 0.00 0.00 3.41
2754 15961 2.621338 ACAGTGAAGTATGCATGGACG 58.379 47.619 10.16 0.00 0.00 4.79
2758 15965 4.629634 CAGTGAAGTATGCATGGACGTTTA 59.370 41.667 10.16 0.00 0.00 2.01
2781 15988 2.746904 CGGTAAATGACAAGCATGGACA 59.253 45.455 0.00 0.00 37.28 4.02
3293 16504 7.520451 TGAACCGCATCTGTTAGTATAGTAT 57.480 36.000 0.00 0.00 0.00 2.12
3456 16667 3.614630 CGTGTGAATTTGGAACATGCCAT 60.615 43.478 0.00 0.00 39.30 4.40
3835 17047 1.193323 CTGGCACTCTCTCCATGAGT 58.807 55.000 0.00 0.00 44.62 3.41
3866 17078 8.585881 GCTTATATACTCCTCCATGTTAGACAA 58.414 37.037 0.00 0.00 0.00 3.18
3903 17117 5.808366 TTACACAGTGAGATTCTGTTCCT 57.192 39.130 7.81 0.00 43.14 3.36
3904 17118 4.696479 ACACAGTGAGATTCTGTTCCTT 57.304 40.909 7.81 0.00 43.14 3.36
3905 17119 4.384056 ACACAGTGAGATTCTGTTCCTTG 58.616 43.478 7.81 0.00 43.14 3.61
3906 17120 4.101585 ACACAGTGAGATTCTGTTCCTTGA 59.898 41.667 7.81 0.00 43.14 3.02
3907 17121 4.450419 CACAGTGAGATTCTGTTCCTTGAC 59.550 45.833 0.00 0.00 43.14 3.18
3908 17122 4.101585 ACAGTGAGATTCTGTTCCTTGACA 59.898 41.667 0.00 0.00 42.50 3.58
3909 17123 5.221803 ACAGTGAGATTCTGTTCCTTGACAT 60.222 40.000 0.00 0.00 42.50 3.06
3910 17124 5.121925 CAGTGAGATTCTGTTCCTTGACATG 59.878 44.000 0.00 0.00 0.00 3.21
3911 17125 4.005650 TGAGATTCTGTTCCTTGACATGC 58.994 43.478 0.00 0.00 0.00 4.06
3912 17126 3.350833 AGATTCTGTTCCTTGACATGCC 58.649 45.455 0.00 0.00 0.00 4.40
3913 17127 1.909700 TTCTGTTCCTTGACATGCCC 58.090 50.000 0.00 0.00 0.00 5.36
3914 17128 0.038166 TCTGTTCCTTGACATGCCCC 59.962 55.000 0.00 0.00 0.00 5.80
3915 17129 0.967380 CTGTTCCTTGACATGCCCCC 60.967 60.000 0.00 0.00 0.00 5.40
3990 17521 8.746052 AATGTGCTGTATATTAGTTTGGCTTA 57.254 30.769 0.00 0.00 0.00 3.09
4034 17565 5.065218 TGTTCAAGAAAAAGTCTCAGCACTC 59.935 40.000 0.00 0.00 34.56 3.51
4035 17566 4.769688 TCAAGAAAAAGTCTCAGCACTCA 58.230 39.130 0.00 0.00 34.56 3.41
4164 17695 3.766591 TGCCGAACAAATATTGGTGGATT 59.233 39.130 0.00 0.00 34.12 3.01
4244 17775 5.895636 TGTATGAGCACATTTTTCCGAAT 57.104 34.783 0.83 0.00 37.87 3.34
4390 17921 9.736023 TGTTATATAGCTGCTGATTATATGTCG 57.264 33.333 13.43 0.00 0.00 4.35
4634 18165 5.942826 AGAATAACAAGGAAGAAGCTGAAGG 59.057 40.000 0.00 0.00 0.00 3.46
4686 18217 1.207488 CCCCACCCAGAGATGAACCA 61.207 60.000 0.00 0.00 0.00 3.67
5151 18787 9.474313 TTGCACCTTCTTAATGTTAGGATAAAT 57.526 29.630 0.00 0.00 0.00 1.40
5175 18811 6.726379 TGTAATCTCCCATGGTTAACATTGA 58.274 36.000 11.73 0.00 37.84 2.57
5196 18832 3.179443 TCTGTGTCTGTGTTCCACTTC 57.821 47.619 0.00 0.00 35.11 3.01
5224 18860 8.793592 GCTCTTATCCAGTTAAAGGAAAAGAAA 58.206 33.333 2.32 0.00 38.93 2.52
5370 19006 5.529060 CAGTCTGCAATTTATTACTCCCTCC 59.471 44.000 0.00 0.00 0.00 4.30
5382 19018 5.687166 TTACTCCCTCCGTTCACAAATAT 57.313 39.130 0.00 0.00 0.00 1.28
5391 19027 7.067008 CCCTCCGTTCACAAATATAAGATGTTT 59.933 37.037 0.00 0.00 0.00 2.83
5441 19077 5.448496 CGGACTGAAATGAGTGAACAAACAA 60.448 40.000 0.00 0.00 0.00 2.83
5456 19092 8.583765 GTGAACAAACAAACTAAAATGTGTCTC 58.416 33.333 0.00 0.00 0.00 3.36
5468 19104 5.359194 AAATGTGTCTCTATTCACCCGAT 57.641 39.130 0.00 0.00 34.14 4.18
5522 19160 7.812648 TGTGAACAGTTGTATTATGGTAAAGC 58.187 34.615 0.00 0.00 0.00 3.51
5532 19170 4.765813 TTATGGTAAAGCCCTCCTGTAC 57.234 45.455 0.00 0.00 34.09 2.90
5533 19171 2.032965 TGGTAAAGCCCTCCTGTACA 57.967 50.000 0.00 0.00 36.19 2.90
5536 19174 3.138653 TGGTAAAGCCCTCCTGTACAAAA 59.861 43.478 0.00 0.00 36.19 2.44
5566 19204 4.445385 GCCATTGTGTCTTGTTGATGAAAC 59.555 41.667 0.00 0.00 39.41 2.78
5589 19227 8.473358 AACAGTTACTACCTTAAAGCCATTTT 57.527 30.769 0.00 0.00 0.00 1.82
5635 19273 5.942872 AGACGTTCCATGTTCATCAAATTC 58.057 37.500 0.00 0.00 0.00 2.17
5678 19316 9.787435 AGTACATTTCTGTATTTTGTAACTCCA 57.213 29.630 0.00 0.00 39.93 3.86
5747 19385 9.772973 CCATAATAGCAAACTAGTAACCACATA 57.227 33.333 0.00 0.00 33.03 2.29
5791 19429 4.332828 AGAAACCCCCTAACTTTTCATCG 58.667 43.478 0.00 0.00 31.57 3.84
5812 19450 2.713863 ACTACTAGGTGGGAGACTCG 57.286 55.000 0.00 0.00 0.00 4.18
5813 19451 2.194859 ACTACTAGGTGGGAGACTCGA 58.805 52.381 0.00 0.00 0.00 4.04
5814 19452 2.575279 ACTACTAGGTGGGAGACTCGAA 59.425 50.000 0.00 0.00 0.00 3.71
5815 19453 1.836802 ACTAGGTGGGAGACTCGAAC 58.163 55.000 0.00 0.00 0.00 3.95
5821 19459 1.295746 GGGAGACTCGAACAACCCC 59.704 63.158 0.00 0.00 0.00 4.95
5907 19545 1.749638 GCTCAGAGCTGCATTGGCT 60.750 57.895 15.78 0.00 43.26 4.75
5910 19548 0.679002 TCAGAGCTGCATTGGCTTCC 60.679 55.000 1.02 0.00 40.40 3.46
5919 19557 2.701423 TGCATTGGCTTCCATGCATTAT 59.299 40.909 14.44 0.00 40.36 1.28
5982 19620 3.846588 AGAAAGGCAGAATCTGGGAAGTA 59.153 43.478 12.66 0.00 31.21 2.24
5993 19631 0.902531 TGGGAAGTAGGTGCTGCTAC 59.097 55.000 0.00 0.00 0.00 3.58
6008 19646 4.462834 TGCTGCTACTCACTATGTACTGTT 59.537 41.667 0.00 0.00 0.00 3.16
6012 19650 7.012138 GCTGCTACTCACTATGTACTGTTAGTA 59.988 40.741 0.00 2.14 0.00 1.82
6034 19672 7.630082 AGTATTACCTTGACAATATGTGGTGT 58.370 34.615 6.36 0.00 28.74 4.16
6035 19673 8.764558 AGTATTACCTTGACAATATGTGGTGTA 58.235 33.333 6.36 0.00 28.74 2.90
6126 19767 5.846714 AGTTATGGGCTGATAGGTTCTACAT 59.153 40.000 0.00 0.00 0.00 2.29
6138 19779 7.734865 TGATAGGTTCTACATCCTGGTTGATAT 59.265 37.037 11.60 0.00 35.51 1.63
6140 19781 5.667626 AGGTTCTACATCCTGGTTGATATGT 59.332 40.000 11.60 7.39 36.56 2.29
6166 19808 2.625087 GGTACCCCCTAGCTGTTGTAGA 60.625 54.545 0.00 0.00 0.00 2.59
6179 19821 3.402110 TGTTGTAGATGTGCTTGAGGTG 58.598 45.455 0.00 0.00 0.00 4.00
6194 19836 6.321181 TGCTTGAGGTGTTCTATTGTTTCTTT 59.679 34.615 0.00 0.00 0.00 2.52
6198 19840 7.479980 TGAGGTGTTCTATTGTTTCTTTTGTG 58.520 34.615 0.00 0.00 0.00 3.33
6336 19978 3.181487 ACGGCAACAATAATTCATCTGGC 60.181 43.478 0.00 0.00 0.00 4.85
6423 20065 1.463674 CATTTGACCGAGGGAAAGGG 58.536 55.000 0.00 0.00 0.00 3.95
6432 20074 0.840722 GAGGGAAAGGGGAGGACACA 60.841 60.000 0.00 0.00 0.00 3.72
6549 20191 4.095410 TGCTCGAATCGCATCAAAAATT 57.905 36.364 0.00 0.00 31.40 1.82
6577 20219 0.322816 GCCCCACTCTCATGCTTTCA 60.323 55.000 0.00 0.00 0.00 2.69
6729 20371 2.486472 CTGTTGAACCAGCTCCAGAT 57.514 50.000 0.00 0.00 0.00 2.90
6741 20383 4.590647 CCAGCTCCAGATCCTCATAAAGTA 59.409 45.833 0.00 0.00 0.00 2.24
6759 20401 4.504916 CGGCCTCTCACCGCAGAG 62.505 72.222 0.00 0.00 44.90 3.35
6767 20409 1.205655 TCTCACCGCAGAGGATTTCAG 59.794 52.381 0.00 0.00 45.00 3.02
6777 20419 3.881688 CAGAGGATTTCAGAATCGCCATT 59.118 43.478 0.00 0.00 42.12 3.16
6978 20620 0.468214 TGATCCCTCGGCTCGAATCT 60.468 55.000 0.00 0.00 34.74 2.40
6987 20629 1.464376 GGCTCGAATCTGGGATCCGA 61.464 60.000 5.45 0.00 0.00 4.55
6999 20641 4.143333 ATCCGACAGTTCCGGCCG 62.143 66.667 21.04 21.04 46.10 6.13
7026 20668 2.435586 CCGCTGAAGCTGGTGAGG 60.436 66.667 0.10 0.00 39.32 3.86
7029 20671 2.752358 CTGAAGCTGGTGAGGGCA 59.248 61.111 0.00 0.00 0.00 5.36
7047 20689 1.005289 AGCTGACCCCATCCTGGAT 59.995 57.895 2.57 2.57 40.96 3.41
7101 20743 0.315251 GCAAGTTTGGGAAGCAGACC 59.685 55.000 0.00 0.00 0.00 3.85
7187 20829 1.069906 GTTGTAGCAGCGTTCTGTTGG 60.070 52.381 0.00 0.00 42.29 3.77
7188 20830 0.105964 TGTAGCAGCGTTCTGTTGGT 59.894 50.000 0.00 0.00 42.29 3.67
7189 20831 0.512952 GTAGCAGCGTTCTGTTGGTG 59.487 55.000 0.00 0.00 39.95 4.17
7195 20837 1.355210 CGTTCTGTTGGTGTGTGCC 59.645 57.895 0.00 0.00 0.00 5.01
7210 20852 0.670162 GTGCCCCGCTAACGTATAGA 59.330 55.000 8.39 0.00 37.70 1.98
7219 20861 5.449588 CCCGCTAACGTATAGAGAAACTGAA 60.450 44.000 8.39 0.00 37.70 3.02
7220 20862 6.032094 CCGCTAACGTATAGAGAAACTGAAA 58.968 40.000 8.39 0.00 37.70 2.69
7221 20863 6.529125 CCGCTAACGTATAGAGAAACTGAAAA 59.471 38.462 8.39 0.00 37.70 2.29
7222 20864 7.062605 CCGCTAACGTATAGAGAAACTGAAAAA 59.937 37.037 8.39 0.00 37.70 1.94
7223 20865 7.891723 CGCTAACGTATAGAGAAACTGAAAAAC 59.108 37.037 8.39 0.00 33.53 2.43
7224 20866 8.923683 GCTAACGTATAGAGAAACTGAAAAACT 58.076 33.333 8.39 0.00 0.00 2.66
7226 20868 8.882415 AACGTATAGAGAAACTGAAAAACTGA 57.118 30.769 0.00 0.00 0.00 3.41
7246 20888 1.090728 TGCGTCTTGCTTGTGAACAA 58.909 45.000 0.00 0.00 46.63 2.83
7249 20891 2.920490 GCGTCTTGCTTGTGAACAAAAA 59.080 40.909 0.00 0.00 41.73 1.94
7252 20894 5.108254 GCGTCTTGCTTGTGAACAAAAATAG 60.108 40.000 0.00 0.00 41.73 1.73
7319 20961 6.759497 AGTTGGCTTAGAAACATTGATACC 57.241 37.500 0.00 0.00 0.00 2.73
7328 21407 8.738199 TTAGAAACATTGATACCGATCGATAC 57.262 34.615 18.66 5.69 34.39 2.24
7337 21416 3.505480 ACCGATCGATACCCTTAGTCT 57.495 47.619 18.66 0.00 0.00 3.24
7339 21418 4.978099 ACCGATCGATACCCTTAGTCTAA 58.022 43.478 18.66 0.00 0.00 2.10
7346 21425 5.067413 TCGATACCCTTAGTCTAAGCACTTG 59.933 44.000 13.38 0.85 34.46 3.16
7349 21429 3.261137 ACCCTTAGTCTAAGCACTTGTCC 59.739 47.826 13.38 0.00 34.46 4.02
7353 21433 5.763204 CCTTAGTCTAAGCACTTGTCCAAAA 59.237 40.000 13.38 0.00 34.46 2.44
7379 21459 8.922058 AAAAGCATAATCTAATTGTTCTGCTG 57.078 30.769 11.10 0.00 38.61 4.41
7381 21461 5.009410 AGCATAATCTAATTGTTCTGCTGCC 59.991 40.000 0.00 0.00 37.34 4.85
7384 21464 7.255242 GCATAATCTAATTGTTCTGCTGCCTAA 60.255 37.037 0.00 0.00 0.00 2.69
7385 21465 6.690194 AATCTAATTGTTCTGCTGCCTAAG 57.310 37.500 0.00 0.00 0.00 2.18
7386 21466 5.165961 TCTAATTGTTCTGCTGCCTAAGT 57.834 39.130 0.00 0.00 0.00 2.24
7387 21467 6.294361 TCTAATTGTTCTGCTGCCTAAGTA 57.706 37.500 0.00 0.00 0.00 2.24
7388 21468 6.889198 TCTAATTGTTCTGCTGCCTAAGTAT 58.111 36.000 0.00 0.00 0.00 2.12
7389 21469 6.986817 TCTAATTGTTCTGCTGCCTAAGTATC 59.013 38.462 0.00 0.00 0.00 2.24
7390 21470 3.165058 TGTTCTGCTGCCTAAGTATCG 57.835 47.619 0.00 0.00 0.00 2.92
7391 21471 2.496070 TGTTCTGCTGCCTAAGTATCGT 59.504 45.455 0.00 0.00 0.00 3.73
7392 21472 3.056107 TGTTCTGCTGCCTAAGTATCGTT 60.056 43.478 0.00 0.00 0.00 3.85
7393 21473 3.887621 TCTGCTGCCTAAGTATCGTTT 57.112 42.857 0.00 0.00 0.00 3.60
7394 21474 3.521560 TCTGCTGCCTAAGTATCGTTTG 58.478 45.455 0.00 0.00 0.00 2.93
7459 21550 1.737236 TGATGCTCGTGTTATGGTTGC 59.263 47.619 0.00 0.00 0.00 4.17
7467 21558 5.347907 GCTCGTGTTATGGTTGCTATATACC 59.652 44.000 0.00 0.00 34.93 2.73
7472 21563 3.762407 ATGGTTGCTATATACCGTGCA 57.238 42.857 0.00 0.00 37.23 4.57
7479 21570 2.029828 GCTATATACCGTGCAGCTGTCT 60.030 50.000 16.64 0.00 0.00 3.41
7484 21575 2.345244 CGTGCAGCTGTCTTCCCT 59.655 61.111 16.64 0.00 0.00 4.20
7502 21593 8.697292 GTCTTCCCTGTAACTTCTAGTCATATT 58.303 37.037 0.00 0.00 0.00 1.28
7503 21594 8.915036 TCTTCCCTGTAACTTCTAGTCATATTC 58.085 37.037 0.00 0.00 0.00 1.75
7534 21627 0.586319 CACACGTGTTTTCGCCTGAT 59.414 50.000 20.79 0.00 0.00 2.90
7623 21717 5.611374 TCAGTTTTAGTCCTCTTTCCACTG 58.389 41.667 0.00 0.00 0.00 3.66
7625 21719 5.823045 CAGTTTTAGTCCTCTTTCCACTGTT 59.177 40.000 0.00 0.00 0.00 3.16
7631 21725 3.565902 GTCCTCTTTCCACTGTTTCAAGG 59.434 47.826 0.00 0.00 0.00 3.61
7747 21842 8.809468 AATTCATTTTTCCTAAGTACTCCCTC 57.191 34.615 0.00 0.00 0.00 4.30
7748 21843 6.309389 TCATTTTTCCTAAGTACTCCCTCC 57.691 41.667 0.00 0.00 0.00 4.30
7749 21844 4.813750 TTTTTCCTAAGTACTCCCTCCG 57.186 45.455 0.00 0.00 0.00 4.63
7750 21845 3.463048 TTTCCTAAGTACTCCCTCCGT 57.537 47.619 0.00 0.00 0.00 4.69
7752 21847 3.010200 TCCTAAGTACTCCCTCCGTTC 57.990 52.381 0.00 0.00 0.00 3.95
7754 21849 3.782523 TCCTAAGTACTCCCTCCGTTCTA 59.217 47.826 0.00 0.00 0.00 2.10
7755 21850 4.228210 TCCTAAGTACTCCCTCCGTTCTAA 59.772 45.833 0.00 0.00 0.00 2.10
7757 21852 5.597594 CCTAAGTACTCCCTCCGTTCTAAAT 59.402 44.000 0.00 0.00 0.00 1.40
7759 21854 7.450944 CCTAAGTACTCCCTCCGTTCTAAATAT 59.549 40.741 0.00 0.00 0.00 1.28
7760 21855 9.512588 CTAAGTACTCCCTCCGTTCTAAATATA 57.487 37.037 0.00 0.00 0.00 0.86
7762 21857 8.406730 AGTACTCCCTCCGTTCTAAATATAAG 57.593 38.462 0.00 0.00 0.00 1.73
7763 21858 6.099159 ACTCCCTCCGTTCTAAATATAAGC 57.901 41.667 0.00 0.00 0.00 3.09
7765 21860 4.586001 TCCCTCCGTTCTAAATATAAGCGT 59.414 41.667 0.00 0.00 0.00 5.07
7766 21861 5.069516 TCCCTCCGTTCTAAATATAAGCGTT 59.930 40.000 0.00 0.00 0.00 4.84
7767 21862 5.756833 CCCTCCGTTCTAAATATAAGCGTTT 59.243 40.000 0.00 0.00 0.00 3.60
7768 21863 6.259387 CCCTCCGTTCTAAATATAAGCGTTTT 59.741 38.462 0.00 0.00 0.00 2.43
7769 21864 7.201670 CCCTCCGTTCTAAATATAAGCGTTTTT 60.202 37.037 0.00 0.00 0.00 1.94
7770 21865 8.819974 CCTCCGTTCTAAATATAAGCGTTTTTA 58.180 33.333 0.00 0.00 0.00 1.52
7771 21866 9.845305 CTCCGTTCTAAATATAAGCGTTTTTAG 57.155 33.333 0.00 0.00 34.47 1.85
7773 21868 9.845305 CCGTTCTAAATATAAGCGTTTTTAGAG 57.155 33.333 0.00 0.00 40.09 2.43
7785 21880 6.772078 AGCGTTTTTAGAGATTTCAATACGG 58.228 36.000 0.00 0.00 0.00 4.02
7786 21881 6.592607 AGCGTTTTTAGAGATTTCAATACGGA 59.407 34.615 0.00 0.00 0.00 4.69
7787 21882 6.681599 GCGTTTTTAGAGATTTCAATACGGAC 59.318 38.462 0.00 0.00 0.00 4.79
7788 21883 7.412672 GCGTTTTTAGAGATTTCAATACGGACT 60.413 37.037 0.00 0.00 0.00 3.85
7789 21884 7.898309 CGTTTTTAGAGATTTCAATACGGACTG 59.102 37.037 0.00 0.00 0.00 3.51
7790 21885 8.718734 GTTTTTAGAGATTTCAATACGGACTGT 58.281 33.333 0.00 0.00 0.00 3.55
7791 21886 9.932207 TTTTTAGAGATTTCAATACGGACTGTA 57.068 29.630 0.00 0.00 37.49 2.74
7797 21892 8.234136 AGATTTCAATACGGACTGTATACAGA 57.766 34.615 34.16 15.53 46.59 3.41
7798 21893 8.136165 AGATTTCAATACGGACTGTATACAGAC 58.864 37.037 34.16 27.98 46.59 3.51
7799 21894 5.413969 TCAATACGGACTGTATACAGACG 57.586 43.478 34.16 33.17 46.59 4.18
7807 21902 7.125536 CGGACTGTATACAGACGTATATTGA 57.874 40.000 34.16 0.00 46.59 2.57
7808 21903 7.014115 CGGACTGTATACAGACGTATATTGAC 58.986 42.308 34.16 13.86 46.59 3.18
7810 21905 8.512956 GGACTGTATACAGACGTATATTGACAT 58.487 37.037 34.16 10.69 46.59 3.06
7841 21936 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
7842 21937 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
7843 21938 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
7844 21939 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
7846 21941 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
7847 21942 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
7848 21943 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
7849 21944 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
7850 21945 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
7851 21946 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
7852 21947 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
7853 21948 5.105310 ACTCATTTTGCTCCGTATGTAGTCT 60.105 40.000 0.00 0.00 0.00 3.24
7854 21949 6.096423 ACTCATTTTGCTCCGTATGTAGTCTA 59.904 38.462 0.00 0.00 0.00 2.59
7855 21950 7.050970 TCATTTTGCTCCGTATGTAGTCTAT 57.949 36.000 0.00 0.00 0.00 1.98
7856 21951 8.173542 TCATTTTGCTCCGTATGTAGTCTATA 57.826 34.615 0.00 0.00 0.00 1.31
7857 21952 8.803235 TCATTTTGCTCCGTATGTAGTCTATAT 58.197 33.333 0.00 0.00 0.00 0.86
7858 21953 9.424319 CATTTTGCTCCGTATGTAGTCTATATT 57.576 33.333 0.00 0.00 0.00 1.28
7859 21954 8.812147 TTTTGCTCCGTATGTAGTCTATATTG 57.188 34.615 0.00 0.00 0.00 1.90
7860 21955 7.754851 TTGCTCCGTATGTAGTCTATATTGA 57.245 36.000 0.00 0.00 0.00 2.57
7861 21956 7.754851 TGCTCCGTATGTAGTCTATATTGAA 57.245 36.000 0.00 0.00 0.00 2.69
7862 21957 8.173542 TGCTCCGTATGTAGTCTATATTGAAA 57.826 34.615 0.00 0.00 0.00 2.69
7863 21958 8.803235 TGCTCCGTATGTAGTCTATATTGAAAT 58.197 33.333 0.00 0.00 0.00 2.17
7864 21959 9.291664 GCTCCGTATGTAGTCTATATTGAAATC 57.708 37.037 0.00 0.00 0.00 2.17
7875 21970 9.785982 AGTCTATATTGAAATCTTTAGAAGGGC 57.214 33.333 0.00 0.00 0.00 5.19
7876 21971 9.785982 GTCTATATTGAAATCTTTAGAAGGGCT 57.214 33.333 0.00 0.00 0.00 5.19
7890 21985 8.897872 TTTAGAAGGGCTTATATTTAGGAACG 57.102 34.615 0.00 0.00 0.00 3.95
7891 21986 5.866207 AGAAGGGCTTATATTTAGGAACGG 58.134 41.667 0.00 0.00 0.00 4.44
7892 21987 5.605488 AGAAGGGCTTATATTTAGGAACGGA 59.395 40.000 0.00 0.00 0.00 4.69
7893 21988 5.485209 AGGGCTTATATTTAGGAACGGAG 57.515 43.478 0.00 0.00 0.00 4.63
7894 21989 4.286291 AGGGCTTATATTTAGGAACGGAGG 59.714 45.833 0.00 0.00 0.00 4.30
7895 21990 4.565028 GGGCTTATATTTAGGAACGGAGGG 60.565 50.000 0.00 0.00 0.00 4.30
7896 21991 4.285260 GGCTTATATTTAGGAACGGAGGGA 59.715 45.833 0.00 0.00 0.00 4.20
7897 21992 5.480205 GCTTATATTTAGGAACGGAGGGAG 58.520 45.833 0.00 0.00 0.00 4.30
7898 21993 5.011840 GCTTATATTTAGGAACGGAGGGAGT 59.988 44.000 0.00 0.00 0.00 3.85
7899 21994 6.210185 GCTTATATTTAGGAACGGAGGGAGTA 59.790 42.308 0.00 0.00 0.00 2.59
7912 22007 7.554959 ACGGAGGGAGTATGACATAAATATT 57.445 36.000 0.00 0.00 0.00 1.28
7913 22008 7.386851 ACGGAGGGAGTATGACATAAATATTG 58.613 38.462 0.00 0.00 0.00 1.90
7935 22030 5.081032 TGTTTTAGGGGGTTTTACAGATGG 58.919 41.667 0.00 0.00 0.00 3.51
7944 22039 4.219944 GGGTTTTACAGATGGGAAAAGACC 59.780 45.833 0.00 0.00 0.00 3.85
7947 22042 2.185004 ACAGATGGGAAAAGACCACG 57.815 50.000 0.00 0.00 41.58 4.94
7948 22043 1.420138 ACAGATGGGAAAAGACCACGT 59.580 47.619 0.00 0.00 41.58 4.49
7959 22057 5.163733 GGAAAAGACCACGTGAGTTAAAACA 60.164 40.000 19.30 0.00 46.40 2.83
8028 22127 8.887036 AATTTGGATTTCAAAACAACTACTCC 57.113 30.769 0.00 0.00 46.93 3.85
8029 22128 6.399639 TTGGATTTCAAAACAACTACTCCC 57.600 37.500 0.00 0.00 31.46 4.30
8030 22129 5.701224 TGGATTTCAAAACAACTACTCCCT 58.299 37.500 0.00 0.00 0.00 4.20
8031 22130 5.768164 TGGATTTCAAAACAACTACTCCCTC 59.232 40.000 0.00 0.00 0.00 4.30
8032 22131 5.183331 GGATTTCAAAACAACTACTCCCTCC 59.817 44.000 0.00 0.00 0.00 4.30
8033 22132 3.396260 TCAAAACAACTACTCCCTCCG 57.604 47.619 0.00 0.00 0.00 4.63
8034 22133 2.701951 TCAAAACAACTACTCCCTCCGT 59.298 45.455 0.00 0.00 0.00 4.69
8035 22134 3.135167 TCAAAACAACTACTCCCTCCGTT 59.865 43.478 0.00 0.00 0.00 4.44
8036 22135 3.397849 AAACAACTACTCCCTCCGTTC 57.602 47.619 0.00 0.00 0.00 3.95
8037 22136 2.005370 ACAACTACTCCCTCCGTTCA 57.995 50.000 0.00 0.00 0.00 3.18
8038 22137 1.893801 ACAACTACTCCCTCCGTTCAG 59.106 52.381 0.00 0.00 0.00 3.02
8039 22138 2.168496 CAACTACTCCCTCCGTTCAGA 58.832 52.381 0.00 0.00 0.00 3.27
8040 22139 2.561419 CAACTACTCCCTCCGTTCAGAA 59.439 50.000 0.00 0.00 0.00 3.02
8041 22140 2.885616 ACTACTCCCTCCGTTCAGAAA 58.114 47.619 0.00 0.00 0.00 2.52
8042 22141 3.442076 ACTACTCCCTCCGTTCAGAAAT 58.558 45.455 0.00 0.00 0.00 2.17
8043 22142 4.607239 ACTACTCCCTCCGTTCAGAAATA 58.393 43.478 0.00 0.00 0.00 1.40
8044 22143 3.889520 ACTCCCTCCGTTCAGAAATAC 57.110 47.619 0.00 0.00 0.00 1.89
8045 22144 3.442076 ACTCCCTCCGTTCAGAAATACT 58.558 45.455 0.00 0.00 0.00 2.12
8046 22145 3.838903 ACTCCCTCCGTTCAGAAATACTT 59.161 43.478 0.00 0.00 0.00 2.24
8047 22146 4.184629 CTCCCTCCGTTCAGAAATACTTG 58.815 47.826 0.00 0.00 0.00 3.16
8048 22147 3.581332 TCCCTCCGTTCAGAAATACTTGT 59.419 43.478 0.00 0.00 0.00 3.16
8049 22148 3.933332 CCCTCCGTTCAGAAATACTTGTC 59.067 47.826 0.00 0.00 0.00 3.18
8050 22149 4.562757 CCCTCCGTTCAGAAATACTTGTCA 60.563 45.833 0.00 0.00 0.00 3.58
8051 22150 4.627467 CCTCCGTTCAGAAATACTTGTCAG 59.373 45.833 0.00 0.00 0.00 3.51
8052 22151 5.462530 TCCGTTCAGAAATACTTGTCAGA 57.537 39.130 0.00 0.00 0.00 3.27
8053 22152 5.470368 TCCGTTCAGAAATACTTGTCAGAG 58.530 41.667 0.00 0.00 0.00 3.35
8054 22153 5.243060 TCCGTTCAGAAATACTTGTCAGAGA 59.757 40.000 0.00 0.00 0.00 3.10
8055 22154 5.926542 CCGTTCAGAAATACTTGTCAGAGAA 59.073 40.000 0.00 0.00 0.00 2.87
8056 22155 6.423905 CCGTTCAGAAATACTTGTCAGAGAAA 59.576 38.462 0.00 0.00 0.00 2.52
8057 22156 7.118390 CCGTTCAGAAATACTTGTCAGAGAAAT 59.882 37.037 0.00 0.00 0.00 2.17
8058 22157 7.954248 CGTTCAGAAATACTTGTCAGAGAAATG 59.046 37.037 0.00 0.00 0.00 2.32
8059 22158 7.912056 TCAGAAATACTTGTCAGAGAAATGG 57.088 36.000 0.00 0.00 0.00 3.16
8060 22159 7.679783 TCAGAAATACTTGTCAGAGAAATGGA 58.320 34.615 0.00 0.00 0.00 3.41
8061 22160 8.324306 TCAGAAATACTTGTCAGAGAAATGGAT 58.676 33.333 0.00 0.00 0.00 3.41
8062 22161 8.396390 CAGAAATACTTGTCAGAGAAATGGATG 58.604 37.037 0.00 0.00 0.00 3.51
8063 22162 8.105829 AGAAATACTTGTCAGAGAAATGGATGT 58.894 33.333 0.00 0.00 0.00 3.06
8064 22163 9.383519 GAAATACTTGTCAGAGAAATGGATGTA 57.616 33.333 0.00 0.00 0.00 2.29
8065 22164 9.911788 AAATACTTGTCAGAGAAATGGATGTAT 57.088 29.630 0.00 0.00 0.00 2.29
8111 22210 8.786898 AGATACATCCATTGTTATCCATTTTCG 58.213 33.333 0.00 0.00 39.87 3.46
8112 22211 5.591099 ACATCCATTGTTATCCATTTTCGC 58.409 37.500 0.00 0.00 33.74 4.70
8113 22212 4.285807 TCCATTGTTATCCATTTTCGCG 57.714 40.909 0.00 0.00 0.00 5.87
8114 22213 3.942115 TCCATTGTTATCCATTTTCGCGA 59.058 39.130 3.71 3.71 0.00 5.87
8115 22214 4.035017 CCATTGTTATCCATTTTCGCGAC 58.965 43.478 9.15 0.00 0.00 5.19
8116 22215 4.438065 CCATTGTTATCCATTTTCGCGACA 60.438 41.667 9.15 0.00 0.00 4.35
8117 22216 4.750952 TTGTTATCCATTTTCGCGACAA 57.249 36.364 9.15 9.93 0.00 3.18
8118 22217 4.335082 TGTTATCCATTTTCGCGACAAG 57.665 40.909 9.15 2.84 0.00 3.16
8119 22218 3.749088 TGTTATCCATTTTCGCGACAAGT 59.251 39.130 9.15 0.42 0.00 3.16
8120 22219 4.930405 TGTTATCCATTTTCGCGACAAGTA 59.070 37.500 9.15 0.00 0.00 2.24
8121 22220 5.408909 TGTTATCCATTTTCGCGACAAGTAA 59.591 36.000 9.15 0.00 0.00 2.24
8122 22221 6.092944 TGTTATCCATTTTCGCGACAAGTAAT 59.907 34.615 9.15 6.18 0.00 1.89
8123 22222 5.560966 ATCCATTTTCGCGACAAGTAATT 57.439 34.783 9.15 0.00 0.00 1.40
8124 22223 4.965062 TCCATTTTCGCGACAAGTAATTC 58.035 39.130 9.15 0.00 0.00 2.17
8125 22224 3.778718 CCATTTTCGCGACAAGTAATTCG 59.221 43.478 9.15 0.00 38.31 3.34
8126 22225 3.443054 TTTTCGCGACAAGTAATTCGG 57.557 42.857 9.15 0.00 35.73 4.30
8127 22226 1.352114 TTCGCGACAAGTAATTCGGG 58.648 50.000 9.15 2.00 46.36 5.14
8130 22229 1.717194 GCGACAAGTAATTCGGGACA 58.283 50.000 0.00 0.00 35.73 4.02
8131 22230 1.659098 GCGACAAGTAATTCGGGACAG 59.341 52.381 0.00 0.00 35.73 3.51
8132 22231 2.673043 GCGACAAGTAATTCGGGACAGA 60.673 50.000 0.00 0.00 35.73 3.41
8133 22232 3.179830 CGACAAGTAATTCGGGACAGAG 58.820 50.000 0.00 0.00 0.00 3.35
8134 22233 3.522553 GACAAGTAATTCGGGACAGAGG 58.477 50.000 0.00 0.00 0.00 3.69
8135 22234 3.170717 ACAAGTAATTCGGGACAGAGGA 58.829 45.455 0.00 0.00 0.00 3.71
8136 22235 3.195825 ACAAGTAATTCGGGACAGAGGAG 59.804 47.826 0.00 0.00 0.00 3.69
8137 22236 2.389715 AGTAATTCGGGACAGAGGAGG 58.610 52.381 0.00 0.00 0.00 4.30
8138 22237 2.108970 GTAATTCGGGACAGAGGAGGT 58.891 52.381 0.00 0.00 0.00 3.85
8148 22247 5.206587 GGGACAGAGGAGGTATGTTACTAA 58.793 45.833 0.00 0.00 27.90 2.24
8191 22290 9.840427 ATTTGTAGGCATATTCGTAAATAATGC 57.160 29.630 0.00 0.00 34.55 3.56
8199 22298 9.825972 GCATATTCGTAAATAATGCTACACAAT 57.174 29.630 0.00 0.00 33.63 2.71
8294 22393 4.298103 TCTAGTACTCTCTCCACCGTTT 57.702 45.455 0.00 0.00 0.00 3.60
8295 22394 4.008330 TCTAGTACTCTCTCCACCGTTTG 58.992 47.826 0.00 0.00 0.00 2.93
8302 22401 4.283722 ACTCTCTCCACCGTTTGAAATAGT 59.716 41.667 0.00 0.00 0.00 2.12
8304 22403 6.154706 ACTCTCTCCACCGTTTGAAATAGTAT 59.845 38.462 0.00 0.00 0.00 2.12
8305 22404 6.942976 TCTCTCCACCGTTTGAAATAGTATT 58.057 36.000 0.00 0.00 0.00 1.89
8362 22466 9.914923 CTTGAAAAGTGCAATTTACCTTTTTAC 57.085 29.630 13.16 1.93 39.70 2.01
8537 22647 8.065407 CAGAATAACTTGCGTTGTAGTTTACAA 58.935 33.333 0.00 0.00 45.66 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 29 2.635915 ACTCAACCGAAATACACCTCCA 59.364 45.455 0.00 0.00 0.00 3.86
28 31 3.000727 CCACTCAACCGAAATACACCTC 58.999 50.000 0.00 0.00 0.00 3.85
54 58 0.467290 GACCAAGACACAAAGGGGCA 60.467 55.000 0.00 0.00 0.00 5.36
78 82 2.561858 GTCACCGGTTAGAGAAGGAGTT 59.438 50.000 2.97 0.00 0.00 3.01
137 142 3.714391 ACTAATCCGCGGAGACATAAAC 58.286 45.455 33.87 0.00 0.00 2.01
149 154 0.394565 ATCTGGCCAGACTAATCCGC 59.605 55.000 37.39 0.00 40.75 5.54
164 169 2.594131 TGGACGACCACCCTATATCTG 58.406 52.381 1.37 0.00 41.77 2.90
194 199 1.157585 GTCCTGGAGAAAAAGGCGAC 58.842 55.000 0.00 0.00 33.25 5.19
197 202 1.740025 CATCGTCCTGGAGAAAAAGGC 59.260 52.381 0.00 0.00 33.25 4.35
198 203 3.334583 TCATCGTCCTGGAGAAAAAGG 57.665 47.619 0.00 0.00 34.65 3.11
254 260 3.132139 CGAGAAGCCGGTCGGAGA 61.132 66.667 14.15 0.00 37.50 3.71
267 273 0.179094 ACGTGGTTGACAAAGCGAGA 60.179 50.000 12.24 0.00 36.55 4.04
275 284 0.034337 GCTAGGGAACGTGGTTGACA 59.966 55.000 0.00 0.00 0.00 3.58
281 290 1.885163 AACGGAGCTAGGGAACGTGG 61.885 60.000 0.00 0.00 37.87 4.94
386 4745 6.201806 CCATCGATTCTTACAAGGTCATCTTC 59.798 42.308 0.00 0.00 32.41 2.87
404 4763 4.067896 GCCATATGTCAAAGTCCATCGAT 58.932 43.478 1.24 0.00 0.00 3.59
408 4767 5.163385 CCAAATGCCATATGTCAAAGTCCAT 60.163 40.000 1.24 0.00 0.00 3.41
410 4769 4.685924 CCAAATGCCATATGTCAAAGTCC 58.314 43.478 1.24 0.00 0.00 3.85
454 5908 5.766174 TCCCTTTAACTAAACAAATCGTGCT 59.234 36.000 0.00 0.00 0.00 4.40
455 5909 6.004408 TCCCTTTAACTAAACAAATCGTGC 57.996 37.500 0.00 0.00 0.00 5.34
456 5910 7.075741 CACTCCCTTTAACTAAACAAATCGTG 58.924 38.462 0.00 0.00 0.00 4.35
457 5911 6.293790 GCACTCCCTTTAACTAAACAAATCGT 60.294 38.462 0.00 0.00 0.00 3.73
458 5912 6.084277 GCACTCCCTTTAACTAAACAAATCG 58.916 40.000 0.00 0.00 0.00 3.34
516 7066 2.880268 TCAAGCTGTTGAATGTGACTGG 59.120 45.455 0.00 0.00 39.85 4.00
556 7130 9.575868 TTGGATCTTGTGTTAAGTAAAATGGTA 57.424 29.630 0.00 0.00 0.00 3.25
559 7133 9.277565 CGATTGGATCTTGTGTTAAGTAAAATG 57.722 33.333 0.00 0.00 0.00 2.32
561 7135 8.610248 TCGATTGGATCTTGTGTTAAGTAAAA 57.390 30.769 0.00 0.00 0.00 1.52
565 7139 4.631813 GCTCGATTGGATCTTGTGTTAAGT 59.368 41.667 0.00 0.00 0.00 2.24
569 7143 3.057969 TGCTCGATTGGATCTTGTGTT 57.942 42.857 0.00 0.00 0.00 3.32
585 10480 0.451783 CGGTTGCATAAGGGTTGCTC 59.548 55.000 0.00 0.00 40.77 4.26
590 10485 2.044352 GGGCGGTTGCATAAGGGT 60.044 61.111 0.00 0.00 45.35 4.34
594 10489 2.124901 CGGAGGGCGGTTGCATAA 60.125 61.111 0.00 0.00 45.35 1.90
607 10502 2.352032 GGTCAGGACTGGGTCGGAG 61.352 68.421 0.00 0.00 32.65 4.63
610 10505 2.989824 ACGGTCAGGACTGGGTCG 60.990 66.667 12.54 3.76 41.89 4.79
611 10506 2.657237 CACGGTCAGGACTGGGTC 59.343 66.667 12.54 0.00 41.89 4.46
638 13799 3.771160 GCGATGAGGTCCGTGGGT 61.771 66.667 0.00 0.00 0.00 4.51
639 13800 4.530857 GGCGATGAGGTCCGTGGG 62.531 72.222 0.00 0.00 0.00 4.61
647 13808 4.996434 GATGGGGCGGCGATGAGG 62.996 72.222 12.98 0.00 0.00 3.86
678 13839 4.043100 GGGGTTGCCTAGGCGGTT 62.043 66.667 28.28 0.00 45.51 4.44
708 13869 4.087892 CCGGAGCTGTCCACCAGG 62.088 72.222 0.00 0.00 44.18 4.45
732 13893 0.973632 CAAACTTAACCAAGGGGGCC 59.026 55.000 0.00 0.00 42.05 5.80
733 13894 0.973632 CCAAACTTAACCAAGGGGGC 59.026 55.000 0.00 0.00 42.05 5.80
806 13982 4.933064 CAGCGACGAGATCCGGCC 62.933 72.222 0.00 0.00 45.44 6.13
820 13996 2.433318 GACGTCAGGAGCACCAGC 60.433 66.667 11.55 0.00 42.56 4.85
821 13997 0.459237 GATGACGTCAGGAGCACCAG 60.459 60.000 24.41 0.00 38.94 4.00
822 13998 0.900182 AGATGACGTCAGGAGCACCA 60.900 55.000 24.41 0.00 38.94 4.17
823 13999 0.247736 AAGATGACGTCAGGAGCACC 59.752 55.000 24.41 6.66 0.00 5.01
824 14000 1.067565 TGAAGATGACGTCAGGAGCAC 60.068 52.381 24.41 12.65 31.61 4.40
825 14001 1.203287 CTGAAGATGACGTCAGGAGCA 59.797 52.381 24.41 16.96 44.57 4.26
826 14002 1.919918 CTGAAGATGACGTCAGGAGC 58.080 55.000 24.41 13.41 44.57 4.70
827 14003 1.470632 GGCTGAAGATGACGTCAGGAG 60.471 57.143 24.41 14.44 46.93 3.69
828 14004 0.532573 GGCTGAAGATGACGTCAGGA 59.467 55.000 24.41 0.00 46.93 3.86
829 14005 0.534412 AGGCTGAAGATGACGTCAGG 59.466 55.000 24.41 10.07 46.93 3.86
831 14007 1.067565 GTGAGGCTGAAGATGACGTCA 60.068 52.381 22.48 22.48 33.90 4.35
832 14008 1.634702 GTGAGGCTGAAGATGACGTC 58.365 55.000 9.11 9.11 0.00 4.34
833 14009 0.109086 CGTGAGGCTGAAGATGACGT 60.109 55.000 0.00 0.00 0.00 4.34
834 14010 1.416813 GCGTGAGGCTGAAGATGACG 61.417 60.000 0.00 0.00 39.11 4.35
835 14011 2.378028 GCGTGAGGCTGAAGATGAC 58.622 57.895 0.00 0.00 39.11 3.06
836 14012 4.919653 GCGTGAGGCTGAAGATGA 57.080 55.556 0.00 0.00 39.11 2.92
864 14040 0.250124 TGTGGCGTCGGTCATCTTTT 60.250 50.000 0.00 0.00 0.00 2.27
868 14044 1.225376 TTTGTGTGGCGTCGGTCATC 61.225 55.000 0.00 0.00 0.00 2.92
869 14045 0.816018 TTTTGTGTGGCGTCGGTCAT 60.816 50.000 0.00 0.00 0.00 3.06
878 14054 2.287644 GTGCCTGAAAATTTTGTGTGGC 59.712 45.455 8.47 15.06 39.53 5.01
884 14060 6.548441 AACATCATGTGCCTGAAAATTTTG 57.452 33.333 8.47 0.00 0.00 2.44
938 14114 7.360101 GCTCTCGCGTAATTATTGGTTATGAAT 60.360 37.037 5.77 0.00 0.00 2.57
943 14119 4.684877 TGCTCTCGCGTAATTATTGGTTA 58.315 39.130 5.77 0.00 39.65 2.85
947 14123 3.426859 CCTCTGCTCTCGCGTAATTATTG 59.573 47.826 5.77 0.00 39.65 1.90
1399 14579 2.550606 AGTTGAAATTCCTAAACGCGCA 59.449 40.909 5.73 0.00 0.00 6.09
1400 14580 3.161306 GAGTTGAAATTCCTAAACGCGC 58.839 45.455 5.73 0.00 0.00 6.86
1410 14590 3.989817 GGCAACCACATGAGTTGAAATTC 59.010 43.478 26.63 14.19 46.03 2.17
1414 14594 1.955778 CAGGCAACCACATGAGTTGAA 59.044 47.619 26.63 0.00 46.03 2.69
1417 14597 2.165167 CATCAGGCAACCACATGAGTT 58.835 47.619 0.00 0.00 37.17 3.01
1421 14601 1.138036 CGCATCAGGCAACCACATG 59.862 57.895 0.00 0.00 45.17 3.21
1465 14645 4.817063 CATTGCGCCAACGAGCCG 62.817 66.667 4.18 0.00 43.93 5.52
1493 14673 5.163663 GGAATGCCACGATGAACTTATGAAA 60.164 40.000 0.00 0.00 0.00 2.69
1498 14678 2.276201 CGGAATGCCACGATGAACTTA 58.724 47.619 0.00 0.00 0.00 2.24
1526 14706 1.002888 AGTCTCATGAACAGCACCCAG 59.997 52.381 0.00 0.00 0.00 4.45
1542 14722 2.146342 CATCACGACAAAGCCAAGTCT 58.854 47.619 0.00 0.00 32.68 3.24
1550 14730 0.865111 TTCGGTGCATCACGACAAAG 59.135 50.000 10.05 0.00 39.04 2.77
1705 14899 4.682860 CAGAAAACCATGAACATTGCAGTC 59.317 41.667 0.00 0.00 0.00 3.51
1732 14926 9.165035 CAAAATAAAGTGATGCCCATTTTGTAT 57.835 29.630 8.64 0.00 38.02 2.29
1762 14956 4.990543 TCAACTGAAACGAGCATAACTG 57.009 40.909 0.00 0.00 0.00 3.16
1764 14958 4.391830 TCCATCAACTGAAACGAGCATAAC 59.608 41.667 0.00 0.00 0.00 1.89
1775 14973 5.306937 TCCTCTTACAAGTCCATCAACTGAA 59.693 40.000 0.00 0.00 0.00 3.02
2014 15212 2.274437 TGCTGATCTCGCTGACAAATC 58.726 47.619 8.62 0.00 0.00 2.17
2049 15248 6.967199 GTCTATCCATTTGAAGCCTAAAAACG 59.033 38.462 0.00 0.00 0.00 3.60
2372 15572 5.236478 ACCTAATCGGTCAAAAGCATAATCG 59.764 40.000 0.00 0.00 44.93 3.34
2550 15750 3.038280 CAACCCCTGGTTCCTTCTTTTT 58.962 45.455 0.00 0.00 43.05 1.94
2673 15880 4.344978 AGTTCTTTCCCAAAGCCCTTATC 58.655 43.478 0.00 0.00 38.39 1.75
2674 15881 4.404185 AGTTCTTTCCCAAAGCCCTTAT 57.596 40.909 0.00 0.00 38.39 1.73
2749 15956 4.818642 TGTCATTTACCGATAAACGTCCA 58.181 39.130 0.00 0.00 40.78 4.02
2750 15957 5.725864 GCTTGTCATTTACCGATAAACGTCC 60.726 44.000 0.00 0.00 40.78 4.79
2751 15958 5.163933 TGCTTGTCATTTACCGATAAACGTC 60.164 40.000 0.00 0.00 40.78 4.34
2752 15959 4.691685 TGCTTGTCATTTACCGATAAACGT 59.308 37.500 0.00 0.00 40.78 3.99
2754 15961 5.971202 CCATGCTTGTCATTTACCGATAAAC 59.029 40.000 0.00 0.00 33.09 2.01
2758 15965 3.627577 GTCCATGCTTGTCATTTACCGAT 59.372 43.478 0.00 0.00 31.79 4.18
2781 15988 8.869109 TGGAAAAACTGGTGAAATGAGATAATT 58.131 29.630 0.00 0.00 0.00 1.40
3345 16556 6.182039 TCGATACCAAAAGCTGAAATGAAG 57.818 37.500 0.00 0.00 0.00 3.02
3347 16558 5.879777 TCATCGATACCAAAAGCTGAAATGA 59.120 36.000 0.00 0.00 0.00 2.57
3456 16667 6.827586 AGAAACAAACTTACTGGAACAACA 57.172 33.333 0.00 0.00 38.70 3.33
3835 17047 8.901472 AACATGGAGGAGTATATAAGCAGATA 57.099 34.615 0.00 0.00 0.00 1.98
3866 17078 6.654582 TCACTGTGTAATGCATCAAAGTATGT 59.345 34.615 10.13 0.00 31.79 2.29
3913 17127 4.586841 TCATTTTGTTAGTGTTTCAGGGGG 59.413 41.667 0.00 0.00 0.00 5.40
3914 17128 5.782893 TCATTTTGTTAGTGTTTCAGGGG 57.217 39.130 0.00 0.00 0.00 4.79
3915 17129 6.146021 GCATTCATTTTGTTAGTGTTTCAGGG 59.854 38.462 0.00 0.00 0.00 4.45
3916 17130 6.700960 TGCATTCATTTTGTTAGTGTTTCAGG 59.299 34.615 0.00 0.00 0.00 3.86
3917 17131 7.222417 TGTGCATTCATTTTGTTAGTGTTTCAG 59.778 33.333 0.00 0.00 0.00 3.02
3923 17454 6.825284 TGTTGTGCATTCATTTTGTTAGTG 57.175 33.333 0.00 0.00 0.00 2.74
3990 17521 4.978099 ACATGGTCTCTGAAACAGTCAAT 58.022 39.130 0.00 0.00 35.22 2.57
4154 17685 7.722949 AATCAGTAATGTGAAATCCACCAAT 57.277 32.000 0.00 0.00 45.09 3.16
4164 17695 4.943705 GCCTCAGGAAATCAGTAATGTGAA 59.056 41.667 0.00 0.00 0.00 3.18
4324 17855 5.144100 TCTTCAGCCTTTTCCCATGTAAAA 58.856 37.500 0.00 0.00 0.00 1.52
4390 17921 7.849804 TCTTACTTTGAATATCTGCAACTCC 57.150 36.000 0.00 0.00 0.00 3.85
4476 18007 7.181143 TGTCCTTTCTATACGAAAAACACAC 57.819 36.000 0.00 0.00 40.87 3.82
4634 18165 1.137282 GCTGCCAGTACCTAGTCTTCC 59.863 57.143 0.00 0.00 0.00 3.46
4686 18217 2.038659 GCTAGCTCTTCCTCAGATGGT 58.961 52.381 7.70 0.00 0.00 3.55
5151 18787 6.726379 TCAATGTTAACCATGGGAGATTACA 58.274 36.000 18.09 11.19 32.82 2.41
5196 18832 7.607991 TCTTTTCCTTTAACTGGATAAGAGCAG 59.392 37.037 17.63 0.00 42.46 4.24
5224 18860 8.768019 GTCGTGGTTTTAAGTAGTATCTGTTTT 58.232 33.333 0.00 0.00 0.00 2.43
5342 18978 6.258947 GGGAGTAATAAATTGCAGACTGAGAC 59.741 42.308 6.65 0.00 0.00 3.36
5370 19006 9.787532 ATCCAAAACATCTTATATTTGTGAACG 57.212 29.630 0.00 0.00 32.29 3.95
5407 19043 0.669619 TTTCAGTCCGCGTGTAGTCA 59.330 50.000 4.92 0.00 0.00 3.41
5413 19049 0.439985 CACTCATTTCAGTCCGCGTG 59.560 55.000 4.92 0.00 0.00 5.34
5415 19051 1.126846 GTTCACTCATTTCAGTCCGCG 59.873 52.381 0.00 0.00 0.00 6.46
5441 19077 6.594159 CGGGTGAATAGAGACACATTTTAGTT 59.406 38.462 0.00 0.00 38.57 2.24
5504 19140 5.432060 AGGAGGGCTTTACCATAATACAACT 59.568 40.000 0.00 0.00 42.05 3.16
5506 19142 5.192923 ACAGGAGGGCTTTACCATAATACAA 59.807 40.000 0.00 0.00 42.05 2.41
5507 19143 4.724798 ACAGGAGGGCTTTACCATAATACA 59.275 41.667 0.00 0.00 42.05 2.29
5509 19145 5.906495 TGTACAGGAGGGCTTTACCATAATA 59.094 40.000 0.00 0.00 42.05 0.98
5511 19147 4.105577 TGTACAGGAGGGCTTTACCATAA 58.894 43.478 0.00 0.00 42.05 1.90
5522 19160 3.129287 GCATGTGATTTTGTACAGGAGGG 59.871 47.826 0.00 0.00 30.76 4.30
5566 19204 8.021396 GTCAAAATGGCTTTAAGGTAGTAACTG 58.979 37.037 0.00 0.00 0.00 3.16
5600 19238 4.609691 TGGAACGTCTCAAAAGAACAAC 57.390 40.909 0.00 0.00 31.93 3.32
5610 19248 3.676291 TGATGAACATGGAACGTCTCA 57.324 42.857 0.00 0.00 0.00 3.27
5635 19273 9.152595 GAAATGTACTTTCCTCCTACAGTTTAG 57.847 37.037 0.00 0.00 37.81 1.85
5690 19328 9.463443 CACTAGTTTTTCCTTCAAAATTGGTAG 57.537 33.333 0.00 0.00 33.82 3.18
5721 19359 8.677148 ATGTGGTTACTAGTTTGCTATTATGG 57.323 34.615 0.00 0.00 0.00 2.74
5753 19391 6.167685 GGGGTTTCTTCTCTCTTAGTCTTTC 58.832 44.000 0.00 0.00 0.00 2.62
5764 19402 5.133830 TGAAAAGTTAGGGGGTTTCTTCTCT 59.866 40.000 0.00 0.00 32.41 3.10
5774 19412 3.951663 AGTTCGATGAAAAGTTAGGGGG 58.048 45.455 0.00 0.00 0.00 5.40
5791 19429 2.944349 CGAGTCTCCCACCTAGTAGTTC 59.056 54.545 0.00 0.00 0.00 3.01
5821 19459 2.032071 GTTCCACTCACCCCACCG 59.968 66.667 0.00 0.00 0.00 4.94
5904 19542 6.396829 AGAAACTTATAATGCATGGAAGCC 57.603 37.500 0.00 0.00 0.00 4.35
5932 19570 9.220767 GTGATGTTCTCTTATAGAAACAAAGGT 57.779 33.333 0.00 0.00 45.78 3.50
5982 19620 2.461695 ACATAGTGAGTAGCAGCACCT 58.538 47.619 0.00 0.00 35.67 4.00
6008 19646 8.764558 ACACCACATATTGTCAAGGTAATACTA 58.235 33.333 0.00 0.00 0.00 1.82
6012 19650 8.494433 AGATACACCACATATTGTCAAGGTAAT 58.506 33.333 0.00 0.00 0.00 1.89
6016 19654 6.599244 ACAAGATACACCACATATTGTCAAGG 59.401 38.462 0.00 0.00 33.71 3.61
6126 19767 6.021030 GGTACCCTATACATATCAACCAGGA 58.979 44.000 0.00 0.00 0.00 3.86
6150 19791 2.743183 GCACATCTACAACAGCTAGGGG 60.743 54.545 0.00 0.00 0.00 4.79
6166 19808 4.655963 ACAATAGAACACCTCAAGCACAT 58.344 39.130 0.00 0.00 0.00 3.21
6198 19840 8.981724 TGTGTAGTTAAGAGTGACAACATATC 57.018 34.615 0.00 0.00 0.00 1.63
6234 19876 4.554134 CGGAGCTCGTCGAAATATAACTCA 60.554 45.833 7.83 0.00 0.00 3.41
6358 20000 2.208132 TCTTTCTGGGCGGCATTTAA 57.792 45.000 12.47 0.00 0.00 1.52
6423 20065 3.944015 CTCTCATTCCAAATGTGTCCTCC 59.056 47.826 0.04 0.00 0.00 4.30
6432 20074 7.124052 ACCAATCTTCATCTCTCATTCCAAAT 58.876 34.615 0.00 0.00 0.00 2.32
6549 20191 0.617820 GAGAGTGGGGCCTTACCTGA 60.618 60.000 0.84 0.00 39.10 3.86
6729 20371 2.957006 GAGAGGCCGTACTTTATGAGGA 59.043 50.000 0.00 0.00 0.00 3.71
6759 20401 2.035066 CCCAATGGCGATTCTGAAATCC 59.965 50.000 0.00 0.00 38.46 3.01
6767 20409 1.151668 CTCGATCCCAATGGCGATTC 58.848 55.000 1.23 0.00 31.87 2.52
6777 20419 3.833645 CGGAACCGCTCGATCCCA 61.834 66.667 0.00 0.00 0.00 4.37
6801 20443 1.410004 CGGGCTGGAATAGTACCTCA 58.590 55.000 0.00 0.00 0.00 3.86
6804 20446 1.070957 GCCGGGCTGGAATAGTACC 59.929 63.158 18.84 0.00 42.00 3.34
6978 20620 3.294750 CGGAACTGTCGGATCCCA 58.705 61.111 6.06 0.00 33.88 4.37
6987 20629 2.602568 AGGTACGGCCGGAACTGT 60.603 61.111 31.63 3.34 43.70 3.55
6999 20641 4.789075 TTCAGCGGCGCGAGGTAC 62.789 66.667 27.59 0.00 0.00 3.34
7020 20662 4.416738 GGGTCAGCTGCCCTCACC 62.417 72.222 28.74 21.35 42.81 4.02
7026 20668 3.415087 AGGATGGGGTCAGCTGCC 61.415 66.667 9.47 13.62 0.00 4.85
7101 20743 2.009774 CTGTAATCCGCCAAGGTGAAG 58.990 52.381 0.23 0.00 41.99 3.02
7176 20818 1.298339 GCACACACCAACAGAACGC 60.298 57.895 0.00 0.00 0.00 4.84
7183 20825 3.835790 TAGCGGGGCACACACCAAC 62.836 63.158 0.00 0.00 0.00 3.77
7187 20829 2.768503 TACGTTAGCGGGGCACACAC 62.769 60.000 3.45 0.00 43.45 3.82
7188 20830 1.890625 ATACGTTAGCGGGGCACACA 61.891 55.000 3.45 0.00 43.45 3.72
7189 20831 0.102844 TATACGTTAGCGGGGCACAC 59.897 55.000 3.45 0.00 43.45 3.82
7195 20837 4.036027 TCAGTTTCTCTATACGTTAGCGGG 59.964 45.833 3.45 0.00 43.45 6.13
7210 20852 4.576463 AGACGCATCAGTTTTTCAGTTTCT 59.424 37.500 0.00 0.00 0.00 2.52
7219 20861 2.358898 ACAAGCAAGACGCATCAGTTTT 59.641 40.909 0.00 0.00 46.13 2.43
7220 20862 1.949525 ACAAGCAAGACGCATCAGTTT 59.050 42.857 0.00 0.00 46.13 2.66
7221 20863 1.265095 CACAAGCAAGACGCATCAGTT 59.735 47.619 0.00 0.00 46.13 3.16
7222 20864 0.870393 CACAAGCAAGACGCATCAGT 59.130 50.000 0.00 0.00 46.13 3.41
7223 20865 1.150827 TCACAAGCAAGACGCATCAG 58.849 50.000 0.00 0.00 46.13 2.90
7224 20866 1.264020 GTTCACAAGCAAGACGCATCA 59.736 47.619 0.00 0.00 46.13 3.07
7225 20867 1.264020 TGTTCACAAGCAAGACGCATC 59.736 47.619 0.00 0.00 46.13 3.91
7226 20868 1.308047 TGTTCACAAGCAAGACGCAT 58.692 45.000 0.00 0.00 46.13 4.73
7246 20888 6.930164 TGCATGATCACAAGCAAAACTATTTT 59.070 30.769 14.72 0.00 45.47 1.82
7249 20891 5.648178 TGCATGATCACAAGCAAAACTAT 57.352 34.783 14.72 0.00 45.47 2.12
7299 20941 5.092554 TCGGTATCAATGTTTCTAAGCCA 57.907 39.130 0.00 0.00 0.00 4.75
7319 20961 4.454847 TGCTTAGACTAAGGGTATCGATCG 59.545 45.833 21.12 9.36 36.31 3.69
7328 21407 3.260884 TGGACAAGTGCTTAGACTAAGGG 59.739 47.826 21.12 1.26 36.31 3.95
7353 21433 9.362539 CAGCAGAACAATTAGATTATGCTTTTT 57.637 29.630 12.98 0.00 40.58 1.94
7357 21437 5.009410 GGCAGCAGAACAATTAGATTATGCT 59.991 40.000 10.84 10.84 43.14 3.79
7363 21443 5.749462 ACTTAGGCAGCAGAACAATTAGAT 58.251 37.500 0.00 0.00 0.00 1.98
7374 21454 3.521560 TCAAACGATACTTAGGCAGCAG 58.478 45.455 0.00 0.00 0.00 4.24
7379 21459 5.391629 CCAAACCTTCAAACGATACTTAGGC 60.392 44.000 0.00 0.00 0.00 3.93
7381 21461 6.402226 GCTCCAAACCTTCAAACGATACTTAG 60.402 42.308 0.00 0.00 0.00 2.18
7384 21464 3.751698 GCTCCAAACCTTCAAACGATACT 59.248 43.478 0.00 0.00 0.00 2.12
7385 21465 3.119955 GGCTCCAAACCTTCAAACGATAC 60.120 47.826 0.00 0.00 0.00 2.24
7386 21466 3.078837 GGCTCCAAACCTTCAAACGATA 58.921 45.455 0.00 0.00 0.00 2.92
7387 21467 1.886542 GGCTCCAAACCTTCAAACGAT 59.113 47.619 0.00 0.00 0.00 3.73
7388 21468 1.314730 GGCTCCAAACCTTCAAACGA 58.685 50.000 0.00 0.00 0.00 3.85
7389 21469 1.001378 CTGGCTCCAAACCTTCAAACG 60.001 52.381 0.00 0.00 0.00 3.60
7390 21470 2.031870 ACTGGCTCCAAACCTTCAAAC 58.968 47.619 0.00 0.00 0.00 2.93
7391 21471 2.306847 GACTGGCTCCAAACCTTCAAA 58.693 47.619 0.00 0.00 0.00 2.69
7392 21472 1.478654 GGACTGGCTCCAAACCTTCAA 60.479 52.381 0.00 0.00 39.21 2.69
7393 21473 0.110486 GGACTGGCTCCAAACCTTCA 59.890 55.000 0.00 0.00 39.21 3.02
7394 21474 0.402121 AGGACTGGCTCCAAACCTTC 59.598 55.000 7.44 0.00 42.46 3.46
7436 21527 0.301687 CCATAACACGAGCATCACGC 59.698 55.000 0.00 0.00 42.91 5.34
7440 21531 2.009774 AGCAACCATAACACGAGCATC 58.990 47.619 0.00 0.00 0.00 3.91
7459 21550 3.924918 AGACAGCTGCACGGTATATAG 57.075 47.619 15.27 0.00 0.00 1.31
7467 21558 2.031516 CAGGGAAGACAGCTGCACG 61.032 63.158 15.27 0.00 0.00 5.34
7472 21563 3.243724 AGAAGTTACAGGGAAGACAGCT 58.756 45.455 0.00 0.00 0.00 4.24
7479 21570 8.840200 AGAATATGACTAGAAGTTACAGGGAA 57.160 34.615 0.00 0.00 0.00 3.97
7502 21593 7.794810 CGAAAACACGTGTGTCATTATTTAAGA 59.205 33.333 24.16 0.00 44.13 2.10
7503 21594 7.407871 GCGAAAACACGTGTGTCATTATTTAAG 60.408 37.037 24.16 14.16 44.13 1.85
7511 21604 0.306533 GGCGAAAACACGTGTGTCAT 59.693 50.000 24.16 8.76 44.13 3.06
7515 21608 0.586319 ATCAGGCGAAAACACGTGTG 59.414 50.000 24.16 10.86 35.59 3.82
7516 21609 1.305201 AATCAGGCGAAAACACGTGT 58.695 45.000 17.22 17.22 35.59 4.49
7598 21692 6.712547 CAGTGGAAAGAGGACTAAAACTGAAT 59.287 38.462 0.00 0.00 35.63 2.57
7654 21748 9.549078 TGTATATAGGCACGATCAATTTTTGTA 57.451 29.630 0.00 0.00 0.00 2.41
7656 21750 9.897744 ATTGTATATAGGCACGATCAATTTTTG 57.102 29.630 0.00 0.00 0.00 2.44
7721 21816 9.244292 GAGGGAGTACTTAGGAAAAATGAATTT 57.756 33.333 0.00 0.00 0.00 1.82
7724 21819 6.575649 CGGAGGGAGTACTTAGGAAAAATGAA 60.576 42.308 0.00 0.00 0.00 2.57
7728 21823 4.162651 ACGGAGGGAGTACTTAGGAAAAA 58.837 43.478 0.00 0.00 0.00 1.94
7741 21836 5.162075 CGCTTATATTTAGAACGGAGGGAG 58.838 45.833 0.00 0.00 0.00 4.30
7742 21837 4.586001 ACGCTTATATTTAGAACGGAGGGA 59.414 41.667 0.00 0.00 0.00 4.20
7743 21838 4.879598 ACGCTTATATTTAGAACGGAGGG 58.120 43.478 0.00 0.00 0.00 4.30
7744 21839 6.839820 AAACGCTTATATTTAGAACGGAGG 57.160 37.500 0.00 0.00 0.00 4.30
7745 21840 9.845305 CTAAAAACGCTTATATTTAGAACGGAG 57.155 33.333 0.00 0.00 37.48 4.63
7747 21842 9.845305 CTCTAAAAACGCTTATATTTAGAACGG 57.155 33.333 7.86 0.00 41.34 4.44
7759 21854 8.385111 CCGTATTGAAATCTCTAAAAACGCTTA 58.615 33.333 0.00 0.00 0.00 3.09
7760 21855 7.118680 TCCGTATTGAAATCTCTAAAAACGCTT 59.881 33.333 0.00 0.00 0.00 4.68
7762 21857 6.681599 GTCCGTATTGAAATCTCTAAAAACGC 59.318 38.462 0.00 0.00 0.00 4.84
7763 21858 7.898309 CAGTCCGTATTGAAATCTCTAAAAACG 59.102 37.037 0.00 0.00 0.00 3.60
7765 21860 8.842358 ACAGTCCGTATTGAAATCTCTAAAAA 57.158 30.769 0.00 0.00 0.00 1.94
7769 21864 9.346005 TGTATACAGTCCGTATTGAAATCTCTA 57.654 33.333 0.08 0.00 41.25 2.43
7770 21865 8.234136 TGTATACAGTCCGTATTGAAATCTCT 57.766 34.615 0.08 0.00 41.25 3.10
7771 21866 8.350722 TCTGTATACAGTCCGTATTGAAATCTC 58.649 37.037 27.83 0.00 44.12 2.75
7773 21868 7.113124 CGTCTGTATACAGTCCGTATTGAAATC 59.887 40.741 27.83 3.64 44.12 2.17
7774 21869 6.916387 CGTCTGTATACAGTCCGTATTGAAAT 59.084 38.462 27.83 0.00 44.12 2.17
7775 21870 6.127925 ACGTCTGTATACAGTCCGTATTGAAA 60.128 38.462 32.20 12.60 44.20 2.69
7778 21873 5.165911 ACGTCTGTATACAGTCCGTATTG 57.834 43.478 32.20 18.32 44.20 1.90
7782 21877 6.707608 TCAATATACGTCTGTATACAGTCCGT 59.292 38.462 33.69 33.69 44.21 4.69
7783 21878 7.014115 GTCAATATACGTCTGTATACAGTCCG 58.986 42.308 29.11 29.11 44.21 4.79
7805 21900 9.634021 AGTGAATCTACACTCTAAGATATGTCA 57.366 33.333 0.00 0.00 46.36 3.58
7819 21914 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
7820 21915 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
7821 21916 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
7822 21917 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
7823 21918 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
7824 21919 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
7825 21920 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
7826 21921 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
7828 21923 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
7829 21924 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
7830 21925 5.352284 AGACTACATACGGAGCAAAATGAG 58.648 41.667 0.00 0.00 0.00 2.90
7831 21926 5.339008 AGACTACATACGGAGCAAAATGA 57.661 39.130 0.00 0.00 0.00 2.57
7832 21927 8.988064 ATATAGACTACATACGGAGCAAAATG 57.012 34.615 0.00 0.00 0.00 2.32
7833 21928 9.424319 CAATATAGACTACATACGGAGCAAAAT 57.576 33.333 0.00 0.00 0.00 1.82
7834 21929 8.635328 TCAATATAGACTACATACGGAGCAAAA 58.365 33.333 0.00 0.00 0.00 2.44
7835 21930 8.173542 TCAATATAGACTACATACGGAGCAAA 57.826 34.615 0.00 0.00 0.00 3.68
7836 21931 7.754851 TCAATATAGACTACATACGGAGCAA 57.245 36.000 0.00 0.00 0.00 3.91
7838 21933 9.291664 GATTTCAATATAGACTACATACGGAGC 57.708 37.037 0.00 0.00 0.00 4.70
7849 21944 9.785982 GCCCTTCTAAAGATTTCAATATAGACT 57.214 33.333 0.00 0.00 0.00 3.24
7850 21945 9.785982 AGCCCTTCTAAAGATTTCAATATAGAC 57.214 33.333 0.00 0.00 0.00 2.59
7864 21959 8.989980 CGTTCCTAAATATAAGCCCTTCTAAAG 58.010 37.037 0.00 0.00 0.00 1.85
7865 21960 7.935210 CCGTTCCTAAATATAAGCCCTTCTAAA 59.065 37.037 0.00 0.00 0.00 1.85
7866 21961 7.290714 TCCGTTCCTAAATATAAGCCCTTCTAA 59.709 37.037 0.00 0.00 0.00 2.10
7867 21962 6.783977 TCCGTTCCTAAATATAAGCCCTTCTA 59.216 38.462 0.00 0.00 0.00 2.10
7868 21963 5.605488 TCCGTTCCTAAATATAAGCCCTTCT 59.395 40.000 0.00 0.00 0.00 2.85
7869 21964 5.861727 TCCGTTCCTAAATATAAGCCCTTC 58.138 41.667 0.00 0.00 0.00 3.46
7870 21965 5.221864 CCTCCGTTCCTAAATATAAGCCCTT 60.222 44.000 0.00 0.00 0.00 3.95
7871 21966 4.286291 CCTCCGTTCCTAAATATAAGCCCT 59.714 45.833 0.00 0.00 0.00 5.19
7872 21967 4.565028 CCCTCCGTTCCTAAATATAAGCCC 60.565 50.000 0.00 0.00 0.00 5.19
7873 21968 4.285260 TCCCTCCGTTCCTAAATATAAGCC 59.715 45.833 0.00 0.00 0.00 4.35
7874 21969 5.011840 ACTCCCTCCGTTCCTAAATATAAGC 59.988 44.000 0.00 0.00 0.00 3.09
7875 21970 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
7876 21971 7.951806 TCATACTCCCTCCGTTCCTAAATATAA 59.048 37.037 0.00 0.00 0.00 0.98
7877 21972 7.395489 GTCATACTCCCTCCGTTCCTAAATATA 59.605 40.741 0.00 0.00 0.00 0.86
7878 21973 6.210984 GTCATACTCCCTCCGTTCCTAAATAT 59.789 42.308 0.00 0.00 0.00 1.28
7879 21974 5.537674 GTCATACTCCCTCCGTTCCTAAATA 59.462 44.000 0.00 0.00 0.00 1.40
7880 21975 4.344390 GTCATACTCCCTCCGTTCCTAAAT 59.656 45.833 0.00 0.00 0.00 1.40
7881 21976 3.703052 GTCATACTCCCTCCGTTCCTAAA 59.297 47.826 0.00 0.00 0.00 1.85
7882 21977 3.294214 GTCATACTCCCTCCGTTCCTAA 58.706 50.000 0.00 0.00 0.00 2.69
7883 21978 2.242965 TGTCATACTCCCTCCGTTCCTA 59.757 50.000 0.00 0.00 0.00 2.94
7884 21979 1.006758 TGTCATACTCCCTCCGTTCCT 59.993 52.381 0.00 0.00 0.00 3.36
7885 21980 1.481871 TGTCATACTCCCTCCGTTCC 58.518 55.000 0.00 0.00 0.00 3.62
7886 21981 4.931661 TTATGTCATACTCCCTCCGTTC 57.068 45.455 0.00 0.00 0.00 3.95
7887 21982 5.888982 ATTTATGTCATACTCCCTCCGTT 57.111 39.130 0.00 0.00 0.00 4.44
7888 21983 7.016268 ACAATATTTATGTCATACTCCCTCCGT 59.984 37.037 0.00 0.00 0.00 4.69
7889 21984 7.386851 ACAATATTTATGTCATACTCCCTCCG 58.613 38.462 0.00 0.00 0.00 4.63
7890 21985 9.574516 AAACAATATTTATGTCATACTCCCTCC 57.425 33.333 0.00 0.00 0.00 4.30
7899 21994 9.500701 AACCCCCTAAAACAATATTTATGTCAT 57.499 29.630 0.00 0.00 0.00 3.06
7912 22007 5.081032 CCATCTGTAAAACCCCCTAAAACA 58.919 41.667 0.00 0.00 0.00 2.83
7913 22008 4.464951 CCCATCTGTAAAACCCCCTAAAAC 59.535 45.833 0.00 0.00 0.00 2.43
7919 22014 2.911552 TTCCCATCTGTAAAACCCCC 57.088 50.000 0.00 0.00 0.00 5.40
7928 22023 1.420138 ACGTGGTCTTTTCCCATCTGT 59.580 47.619 0.00 0.00 33.76 3.41
7931 22026 2.076863 CTCACGTGGTCTTTTCCCATC 58.923 52.381 17.00 0.00 33.76 3.51
7935 22030 5.163733 TGTTTTAACTCACGTGGTCTTTTCC 60.164 40.000 17.00 0.00 0.00 3.13
7944 22039 4.358494 TGGGTTTGTTTTAACTCACGTG 57.642 40.909 9.94 9.94 33.69 4.49
7947 22042 8.880878 ATTGTAATGGGTTTGTTTTAACTCAC 57.119 30.769 0.00 0.00 41.04 3.51
7948 22043 9.892130 AAATTGTAATGGGTTTGTTTTAACTCA 57.108 25.926 0.00 0.00 42.33 3.41
7988 22086 9.357652 GAAATCCAAATTTCAATTGAATCGAGA 57.642 29.630 21.10 14.24 46.68 4.04
8027 22126 3.933332 GACAAGTATTTCTGAACGGAGGG 59.067 47.826 0.00 0.00 0.00 4.30
8028 22127 4.566004 TGACAAGTATTTCTGAACGGAGG 58.434 43.478 0.00 0.00 0.00 4.30
8029 22128 5.470368 TCTGACAAGTATTTCTGAACGGAG 58.530 41.667 0.00 0.00 0.00 4.63
8030 22129 5.243060 TCTCTGACAAGTATTTCTGAACGGA 59.757 40.000 0.00 0.00 0.00 4.69
8031 22130 5.470368 TCTCTGACAAGTATTTCTGAACGG 58.530 41.667 0.00 0.00 0.00 4.44
8032 22131 7.408132 TTTCTCTGACAAGTATTTCTGAACG 57.592 36.000 0.00 0.00 0.00 3.95
8033 22132 8.233190 CCATTTCTCTGACAAGTATTTCTGAAC 58.767 37.037 0.00 0.00 0.00 3.18
8034 22133 8.156820 TCCATTTCTCTGACAAGTATTTCTGAA 58.843 33.333 0.00 0.00 0.00 3.02
8035 22134 7.679783 TCCATTTCTCTGACAAGTATTTCTGA 58.320 34.615 0.00 0.00 0.00 3.27
8036 22135 7.912056 TCCATTTCTCTGACAAGTATTTCTG 57.088 36.000 0.00 0.00 0.00 3.02
8037 22136 8.105829 ACATCCATTTCTCTGACAAGTATTTCT 58.894 33.333 0.00 0.00 0.00 2.52
8038 22137 8.273780 ACATCCATTTCTCTGACAAGTATTTC 57.726 34.615 0.00 0.00 0.00 2.17
8039 22138 9.911788 ATACATCCATTTCTCTGACAAGTATTT 57.088 29.630 0.00 0.00 0.00 1.40
8085 22184 8.786898 CGAAAATGGATAACAATGGATGTATCT 58.213 33.333 0.00 0.00 42.99 1.98
8086 22185 7.538678 GCGAAAATGGATAACAATGGATGTATC 59.461 37.037 0.00 0.00 42.99 2.24
8087 22186 7.370383 GCGAAAATGGATAACAATGGATGTAT 58.630 34.615 0.00 0.00 42.99 2.29
8088 22187 6.512578 CGCGAAAATGGATAACAATGGATGTA 60.513 38.462 0.00 0.00 42.99 2.29
8089 22188 5.591099 GCGAAAATGGATAACAATGGATGT 58.409 37.500 0.00 0.00 46.82 3.06
8090 22189 4.676471 CGCGAAAATGGATAACAATGGATG 59.324 41.667 0.00 0.00 0.00 3.51
8091 22190 4.578516 TCGCGAAAATGGATAACAATGGAT 59.421 37.500 6.20 0.00 0.00 3.41
8092 22191 3.942115 TCGCGAAAATGGATAACAATGGA 59.058 39.130 6.20 0.00 0.00 3.41
8093 22192 4.035017 GTCGCGAAAATGGATAACAATGG 58.965 43.478 12.06 0.00 0.00 3.16
8094 22193 4.657055 TGTCGCGAAAATGGATAACAATG 58.343 39.130 12.06 0.00 0.00 2.82
8095 22194 4.955925 TGTCGCGAAAATGGATAACAAT 57.044 36.364 12.06 0.00 0.00 2.71
8096 22195 4.214545 ACTTGTCGCGAAAATGGATAACAA 59.785 37.500 13.05 7.31 0.00 2.83
8097 22196 3.749088 ACTTGTCGCGAAAATGGATAACA 59.251 39.130 13.05 0.00 0.00 2.41
8098 22197 4.336532 ACTTGTCGCGAAAATGGATAAC 57.663 40.909 13.05 0.00 0.00 1.89
8099 22198 6.671614 ATTACTTGTCGCGAAAATGGATAA 57.328 33.333 13.05 9.42 0.00 1.75
8100 22199 6.508880 CGAATTACTTGTCGCGAAAATGGATA 60.509 38.462 13.05 0.53 0.00 2.59
8101 22200 5.560966 AATTACTTGTCGCGAAAATGGAT 57.439 34.783 13.05 3.91 0.00 3.41
8102 22201 4.434989 CGAATTACTTGTCGCGAAAATGGA 60.435 41.667 13.05 0.56 0.00 3.41
8103 22202 3.778718 CGAATTACTTGTCGCGAAAATGG 59.221 43.478 13.05 4.35 0.00 3.16
8104 22203 3.778718 CCGAATTACTTGTCGCGAAAATG 59.221 43.478 13.05 9.32 35.93 2.32
8105 22204 3.181514 CCCGAATTACTTGTCGCGAAAAT 60.182 43.478 13.05 5.74 35.93 1.82
8106 22205 2.158058 CCCGAATTACTTGTCGCGAAAA 59.842 45.455 12.06 12.01 35.93 2.29
8107 22206 1.727880 CCCGAATTACTTGTCGCGAAA 59.272 47.619 12.06 0.54 35.93 3.46
8108 22207 1.067706 TCCCGAATTACTTGTCGCGAA 60.068 47.619 12.06 0.00 35.93 4.70
8109 22208 0.527113 TCCCGAATTACTTGTCGCGA 59.473 50.000 3.71 3.71 35.93 5.87
8110 22209 0.643820 GTCCCGAATTACTTGTCGCG 59.356 55.000 0.00 0.00 35.93 5.87
8111 22210 1.659098 CTGTCCCGAATTACTTGTCGC 59.341 52.381 0.00 0.00 35.93 5.19
8112 22211 3.179830 CTCTGTCCCGAATTACTTGTCG 58.820 50.000 0.00 0.00 37.01 4.35
8113 22212 3.194968 TCCTCTGTCCCGAATTACTTGTC 59.805 47.826 0.00 0.00 0.00 3.18
8114 22213 3.170717 TCCTCTGTCCCGAATTACTTGT 58.829 45.455 0.00 0.00 0.00 3.16
8115 22214 3.430929 CCTCCTCTGTCCCGAATTACTTG 60.431 52.174 0.00 0.00 0.00 3.16
8116 22215 2.766828 CCTCCTCTGTCCCGAATTACTT 59.233 50.000 0.00 0.00 0.00 2.24
8117 22216 2.292323 ACCTCCTCTGTCCCGAATTACT 60.292 50.000 0.00 0.00 0.00 2.24
8118 22217 2.108970 ACCTCCTCTGTCCCGAATTAC 58.891 52.381 0.00 0.00 0.00 1.89
8119 22218 2.544844 ACCTCCTCTGTCCCGAATTA 57.455 50.000 0.00 0.00 0.00 1.40
8120 22219 2.544844 TACCTCCTCTGTCCCGAATT 57.455 50.000 0.00 0.00 0.00 2.17
8121 22220 2.320781 CATACCTCCTCTGTCCCGAAT 58.679 52.381 0.00 0.00 0.00 3.34
8122 22221 1.006758 ACATACCTCCTCTGTCCCGAA 59.993 52.381 0.00 0.00 0.00 4.30
8123 22222 0.629596 ACATACCTCCTCTGTCCCGA 59.370 55.000 0.00 0.00 0.00 5.14
8124 22223 1.486211 AACATACCTCCTCTGTCCCG 58.514 55.000 0.00 0.00 0.00 5.14
8125 22224 3.644335 AGTAACATACCTCCTCTGTCCC 58.356 50.000 0.00 0.00 0.00 4.46
8126 22225 6.324254 ACATTAGTAACATACCTCCTCTGTCC 59.676 42.308 0.00 0.00 0.00 4.02
8127 22226 7.285858 AGACATTAGTAACATACCTCCTCTGTC 59.714 40.741 0.00 0.00 0.00 3.51
8128 22227 7.126733 AGACATTAGTAACATACCTCCTCTGT 58.873 38.462 0.00 0.00 0.00 3.41
8129 22228 7.255660 GGAGACATTAGTAACATACCTCCTCTG 60.256 44.444 0.00 0.00 35.89 3.35
8130 22229 6.778559 GGAGACATTAGTAACATACCTCCTCT 59.221 42.308 0.00 0.00 35.89 3.69
8131 22230 6.550108 TGGAGACATTAGTAACATACCTCCTC 59.450 42.308 0.00 0.00 38.66 3.71
8132 22231 6.441222 TGGAGACATTAGTAACATACCTCCT 58.559 40.000 0.00 0.00 38.66 3.69
8133 22232 6.726490 TGGAGACATTAGTAACATACCTCC 57.274 41.667 0.00 0.00 38.43 4.30
8134 22233 7.783042 ACTTGGAGACATTAGTAACATACCTC 58.217 38.462 0.00 0.00 42.32 3.85
8135 22234 7.735326 ACTTGGAGACATTAGTAACATACCT 57.265 36.000 0.00 0.00 42.32 3.08
8136 22235 9.880157 TTTACTTGGAGACATTAGTAACATACC 57.120 33.333 0.00 0.00 41.17 2.73
8148 22247 8.903820 GCCTACAAATATTTTACTTGGAGACAT 58.096 33.333 0.00 0.00 42.32 3.06
8166 22265 9.062524 AGCATTATTTACGAATATGCCTACAAA 57.937 29.630 0.00 0.00 35.35 2.83
8269 22368 4.641094 ACGGTGGAGAGAGTACTAGAATTG 59.359 45.833 0.00 0.00 0.00 2.32
8285 22384 7.844009 AGTCTAATACTATTTCAAACGGTGGA 58.156 34.615 0.00 0.00 36.36 4.02
8329 22428 9.914923 GGTAAATTGCACTTTTCAAGTTTAAAG 57.085 29.630 7.39 5.93 40.46 1.85
8332 22431 9.660180 AAAGGTAAATTGCACTTTTCAAGTTTA 57.340 25.926 7.39 0.00 40.46 2.01
8333 22432 8.560355 AAAGGTAAATTGCACTTTTCAAGTTT 57.440 26.923 7.39 2.11 40.46 2.66
8334 22433 8.560355 AAAAGGTAAATTGCACTTTTCAAGTT 57.440 26.923 7.39 0.00 40.46 2.66
8335 22434 8.560355 AAAAAGGTAAATTGCACTTTTCAAGT 57.440 26.923 7.39 0.00 40.94 3.16
8336 22435 9.914923 GTAAAAAGGTAAATTGCACTTTTCAAG 57.085 29.630 7.39 0.00 40.94 3.02
8385 22489 7.918033 AGTCATTTCTCATACGTAGAACATCTG 59.082 37.037 0.08 0.00 32.81 2.90
8397 22501 7.925483 AGCTTCATGTCTAGTCATTTCTCATAC 59.075 37.037 0.00 0.00 0.00 2.39


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.