Multiple sequence alignment - TraesCS3B01G077700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G077700 chr3B 100.000 3179 0 0 1 3179 48710052 48706874 0.000000e+00 5871.0
1 TraesCS3B01G077700 chr3B 86.009 2130 240 29 909 3018 48672995 48670904 0.000000e+00 2230.0
2 TraesCS3B01G077700 chr3B 85.226 1374 178 13 1160 2518 48780171 48781534 0.000000e+00 1389.0
3 TraesCS3B01G077700 chr3B 85.121 289 38 5 2594 2877 48786162 48786450 1.120000e-74 291.0
4 TraesCS3B01G077700 chr3B 92.568 148 11 0 3031 3178 48670827 48670680 2.480000e-51 213.0
5 TraesCS3B01G077700 chr2A 91.631 1613 114 9 1088 2686 770347524 770345919 0.000000e+00 2211.0
6 TraesCS3B01G077700 chr2B 83.112 2037 250 41 1058 3029 790609120 790607113 0.000000e+00 1770.0
7 TraesCS3B01G077700 chr2B 90.223 1258 101 13 1443 2686 790610666 790611915 0.000000e+00 1622.0
8 TraesCS3B01G077700 chr2B 91.232 479 39 3 74 549 790610181 790610659 0.000000e+00 649.0
9 TraesCS3B01G077700 chr2D 90.541 1258 98 12 1443 2686 644983738 644982488 0.000000e+00 1644.0
10 TraesCS3B01G077700 chr2D 90.382 1258 100 14 1443 2686 644978235 644976985 0.000000e+00 1633.0
11 TraesCS3B01G077700 chr2D 87.353 933 115 3 1056 1986 645006952 645006021 0.000000e+00 1066.0
12 TraesCS3B01G077700 chr2D 86.569 685 81 5 987 1667 644979125 644979802 0.000000e+00 745.0
13 TraesCS3B01G077700 chr2D 93.506 462 30 0 88 549 644978703 644978242 0.000000e+00 688.0
14 TraesCS3B01G077700 chr2D 93.506 462 29 1 88 549 644984205 644983745 0.000000e+00 686.0
15 TraesCS3B01G077700 chr2D 85.497 593 75 5 1726 2307 644979832 644980424 2.710000e-170 608.0
16 TraesCS3B01G077700 chr2D 91.667 60 3 2 1 60 644978749 644978692 7.310000e-12 82.4
17 TraesCS3B01G077700 chr2D 91.667 60 3 2 1 60 644984251 644984194 7.310000e-12 82.4
18 TraesCS3B01G077700 chr6D 92.857 84 4 2 351 434 448416814 448416733 1.550000e-23 121.0
19 TraesCS3B01G077700 chr5D 87.356 87 11 0 2708 2794 324411928 324411842 2.020000e-17 100.0
20 TraesCS3B01G077700 chr1B 81.416 113 18 3 2702 2812 493871972 493871861 4.370000e-14 89.8
21 TraesCS3B01G077700 chr1B 83.696 92 14 1 2700 2791 493871873 493871963 5.650000e-13 86.1
22 TraesCS3B01G077700 chr1B 100.000 28 0 0 2627 2654 482906968 482906941 6.000000e-03 52.8
23 TraesCS3B01G077700 chr7B 83.333 96 14 2 2708 2802 138742428 138742334 1.570000e-13 87.9
24 TraesCS3B01G077700 chr5B 83.696 92 15 0 2707 2798 706306965 706306874 1.570000e-13 87.9
25 TraesCS3B01G077700 chr7D 82.474 97 15 2 2708 2803 174147930 174147835 2.030000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G077700 chr3B 48706874 48710052 3178 True 5871.000000 5871 100.000000 1 3179 1 chr3B.!!$R1 3178
1 TraesCS3B01G077700 chr3B 48780171 48781534 1363 False 1389.000000 1389 85.226000 1160 2518 1 chr3B.!!$F1 1358
2 TraesCS3B01G077700 chr3B 48670680 48672995 2315 True 1221.500000 2230 89.288500 909 3178 2 chr3B.!!$R2 2269
3 TraesCS3B01G077700 chr2A 770345919 770347524 1605 True 2211.000000 2211 91.631000 1088 2686 1 chr2A.!!$R1 1598
4 TraesCS3B01G077700 chr2B 790607113 790609120 2007 True 1770.000000 1770 83.112000 1058 3029 1 chr2B.!!$R1 1971
5 TraesCS3B01G077700 chr2B 790610181 790611915 1734 False 1135.500000 1622 90.727500 74 2686 2 chr2B.!!$F1 2612
6 TraesCS3B01G077700 chr2D 645006021 645006952 931 True 1066.000000 1066 87.353000 1056 1986 1 chr2D.!!$R1 930
7 TraesCS3B01G077700 chr2D 644976985 644984251 7266 True 802.633333 1644 91.878167 1 2686 6 chr2D.!!$R2 2685
8 TraesCS3B01G077700 chr2D 644979125 644980424 1299 False 676.500000 745 86.033000 987 2307 2 chr2D.!!$F1 1320

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
581 583 0.032815 TGCAACGGTCACTCAATCGA 59.967 50.0 0.0 0.0 0.0 3.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2421 7982 0.250124 TCCACGCGGTGTCAAAAGAT 60.25 50.0 12.47 0.0 0.0 2.4 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 5.869579 GAGCTAATCCACATAAGGAATGGA 58.130 41.667 0.00 0.00 46.36 3.41
59 60 4.183223 TCCACATAAGGAATGGATTGGG 57.817 45.455 0.00 0.00 40.16 4.12
60 61 3.531397 TCCACATAAGGAATGGATTGGGT 59.469 43.478 0.00 0.00 40.16 4.51
61 62 4.016666 TCCACATAAGGAATGGATTGGGTT 60.017 41.667 0.00 0.00 40.16 4.11
62 63 4.099881 CCACATAAGGAATGGATTGGGTTG 59.900 45.833 0.00 0.00 40.16 3.77
63 64 4.955450 CACATAAGGAATGGATTGGGTTGA 59.045 41.667 0.00 0.00 40.16 3.18
64 65 5.599656 CACATAAGGAATGGATTGGGTTGAT 59.400 40.000 0.00 0.00 40.16 2.57
65 66 5.835280 ACATAAGGAATGGATTGGGTTGATC 59.165 40.000 0.00 0.00 40.16 2.92
66 67 3.319031 AGGAATGGATTGGGTTGATCC 57.681 47.619 0.00 0.00 42.78 3.36
70 71 2.512692 TGGATTGGGTTGATCCAGTG 57.487 50.000 1.84 0.00 46.11 3.66
71 72 1.991813 TGGATTGGGTTGATCCAGTGA 59.008 47.619 1.84 0.00 46.11 3.41
72 73 2.290896 TGGATTGGGTTGATCCAGTGAC 60.291 50.000 1.84 0.00 46.11 3.67
73 74 2.009774 GATTGGGTTGATCCAGTGACG 58.990 52.381 0.00 0.00 38.17 4.35
74 75 0.036164 TTGGGTTGATCCAGTGACGG 59.964 55.000 0.00 0.00 38.17 4.79
75 76 0.834261 TGGGTTGATCCAGTGACGGA 60.834 55.000 0.00 0.00 40.07 4.69
82 83 0.541863 ATCCAGTGACGGATCCAACC 59.458 55.000 13.41 0.04 42.36 3.77
83 84 1.078426 CCAGTGACGGATCCAACCC 60.078 63.158 13.41 0.00 0.00 4.11
84 85 1.676968 CAGTGACGGATCCAACCCA 59.323 57.895 13.41 0.28 0.00 4.51
85 86 0.036164 CAGTGACGGATCCAACCCAA 59.964 55.000 13.41 0.00 0.00 4.12
86 87 0.036306 AGTGACGGATCCAACCCAAC 59.964 55.000 13.41 0.88 0.00 3.77
90 91 1.131303 ACGGATCCAACCCAACAGGA 61.131 55.000 13.41 0.00 39.89 3.86
153 154 5.597813 ATTATTCAAATCATCCGACGAGC 57.402 39.130 0.00 0.00 0.00 5.03
158 159 1.680522 AATCATCCGACGAGCCTGCT 61.681 55.000 0.00 0.00 0.00 4.24
164 165 3.386237 GACGAGCCTGCTGGGAGT 61.386 66.667 12.06 2.59 37.23 3.85
204 205 2.936032 GAGCCCCCACTCCCAAGT 60.936 66.667 0.00 0.00 35.60 3.16
210 211 0.405585 CCCCACTCCCAAGTTGATGT 59.594 55.000 3.87 0.00 31.71 3.06
309 310 0.618680 CATGGTCACCCTGGAGGAGA 60.619 60.000 0.00 0.00 39.89 3.71
324 325 0.830648 GGAGAACCGTCATCCATGGA 59.169 55.000 18.88 18.88 34.76 3.41
336 337 0.911769 TCCATGGATGTCGCCTTCTT 59.088 50.000 11.44 0.00 0.00 2.52
364 365 4.241555 CGCGATTGGGGCTAGCCT 62.242 66.667 32.18 13.72 36.10 4.58
396 397 0.458260 GAAGGAGGAAGACGAGGAGC 59.542 60.000 0.00 0.00 0.00 4.70
410 411 4.008933 GAGCGTGGCCACCAGAGT 62.009 66.667 29.95 9.99 32.34 3.24
431 432 4.141135 AGTGCTAGGCTGAGAGATAAGGTA 60.141 45.833 0.00 0.00 0.00 3.08
457 459 1.132199 GGTGATGTGCGAGACGTACG 61.132 60.000 15.01 15.01 44.75 3.67
464 466 2.025727 CGAGACGTACGATGGGGC 59.974 66.667 24.41 3.93 0.00 5.80
472 474 0.600255 GTACGATGGGGCCTTGATCG 60.600 60.000 22.80 22.80 43.64 3.69
489 491 3.204827 GCATGGCTTGCGACCGAT 61.205 61.111 9.75 0.00 42.54 4.18
496 498 0.249489 GCTTGCGACCGATAGACCAT 60.249 55.000 0.00 0.00 39.76 3.55
544 546 6.814146 TGAAACGTTTTCCAACTTTTAAGCAT 59.186 30.769 15.89 0.00 35.17 3.79
549 551 7.221259 ACGTTTTCCAACTTTTAAGCATTGTAC 59.779 33.333 0.00 0.00 0.00 2.90
551 553 6.621316 TTCCAACTTTTAAGCATTGTACGA 57.379 33.333 0.00 0.00 0.00 3.43
552 554 6.811253 TCCAACTTTTAAGCATTGTACGAT 57.189 33.333 0.00 0.00 0.00 3.73
553 555 7.908827 TCCAACTTTTAAGCATTGTACGATA 57.091 32.000 0.00 0.00 0.00 2.92
555 557 8.231837 TCCAACTTTTAAGCATTGTACGATAAC 58.768 33.333 0.00 0.00 0.00 1.89
556 558 8.234546 CCAACTTTTAAGCATTGTACGATAACT 58.765 33.333 0.00 0.00 0.00 2.24
557 559 9.607285 CAACTTTTAAGCATTGTACGATAACTT 57.393 29.630 12.75 12.75 0.00 2.66
563 565 9.767684 TTAAGCATTGTACGATAACTTTTCATG 57.232 29.630 13.19 0.00 0.00 3.07
564 566 6.258160 AGCATTGTACGATAACTTTTCATGC 58.742 36.000 0.00 0.00 0.00 4.06
565 567 6.027131 GCATTGTACGATAACTTTTCATGCA 58.973 36.000 0.00 0.00 0.00 3.96
566 568 6.526325 GCATTGTACGATAACTTTTCATGCAA 59.474 34.615 0.00 0.00 0.00 4.08
567 569 7.461416 GCATTGTACGATAACTTTTCATGCAAC 60.461 37.037 0.00 0.00 0.00 4.17
568 570 5.613812 TGTACGATAACTTTTCATGCAACG 58.386 37.500 0.00 0.00 0.00 4.10
569 571 4.078363 ACGATAACTTTTCATGCAACGG 57.922 40.909 0.00 0.00 0.00 4.44
570 572 3.500680 ACGATAACTTTTCATGCAACGGT 59.499 39.130 0.00 0.00 0.00 4.83
571 573 4.088648 CGATAACTTTTCATGCAACGGTC 58.911 43.478 0.00 0.00 0.00 4.79
572 574 4.377943 CGATAACTTTTCATGCAACGGTCA 60.378 41.667 0.00 0.00 0.00 4.02
573 575 2.774439 ACTTTTCATGCAACGGTCAC 57.226 45.000 0.00 0.00 0.00 3.67
574 576 2.297701 ACTTTTCATGCAACGGTCACT 58.702 42.857 0.00 0.00 0.00 3.41
575 577 2.290641 ACTTTTCATGCAACGGTCACTC 59.709 45.455 0.00 0.00 0.00 3.51
576 578 1.960417 TTTCATGCAACGGTCACTCA 58.040 45.000 0.00 0.00 0.00 3.41
577 579 1.960417 TTCATGCAACGGTCACTCAA 58.040 45.000 0.00 0.00 0.00 3.02
578 580 2.183478 TCATGCAACGGTCACTCAAT 57.817 45.000 0.00 0.00 0.00 2.57
579 581 2.076100 TCATGCAACGGTCACTCAATC 58.924 47.619 0.00 0.00 0.00 2.67
580 582 1.078709 ATGCAACGGTCACTCAATCG 58.921 50.000 0.00 0.00 0.00 3.34
581 583 0.032815 TGCAACGGTCACTCAATCGA 59.967 50.000 0.00 0.00 0.00 3.59
582 584 1.337728 TGCAACGGTCACTCAATCGAT 60.338 47.619 0.00 0.00 0.00 3.59
583 585 1.061131 GCAACGGTCACTCAATCGATG 59.939 52.381 0.00 0.00 0.00 3.84
584 586 1.660607 CAACGGTCACTCAATCGATGG 59.339 52.381 0.00 0.00 0.00 3.51
585 587 1.182667 ACGGTCACTCAATCGATGGA 58.817 50.000 1.71 1.71 0.00 3.41
586 588 1.135139 ACGGTCACTCAATCGATGGAG 59.865 52.381 25.40 25.40 37.18 3.86
587 589 1.536922 CGGTCACTCAATCGATGGAGG 60.537 57.143 29.18 19.34 35.45 4.30
588 590 1.576356 GTCACTCAATCGATGGAGGC 58.424 55.000 29.18 16.99 35.45 4.70
589 591 0.103026 TCACTCAATCGATGGAGGCG 59.897 55.000 29.18 20.75 35.45 5.52
590 592 1.227380 ACTCAATCGATGGAGGCGC 60.227 57.895 29.18 0.00 35.45 6.53
591 593 2.279451 TCAATCGATGGAGGCGCG 60.279 61.111 0.00 0.00 0.00 6.86
592 594 4.005472 CAATCGATGGAGGCGCGC 62.005 66.667 25.94 25.94 0.00 6.86
613 615 4.514577 CGATCGGCGGCTGAACCT 62.515 66.667 16.55 0.00 35.61 3.50
614 616 2.812499 GATCGGCGGCTGAACCTA 59.188 61.111 16.55 0.00 35.61 3.08
615 617 1.143183 GATCGGCGGCTGAACCTAA 59.857 57.895 16.55 0.00 35.61 2.69
616 618 0.249911 GATCGGCGGCTGAACCTAAT 60.250 55.000 16.55 0.00 35.61 1.73
617 619 0.249911 ATCGGCGGCTGAACCTAATC 60.250 55.000 16.55 0.00 35.61 1.75
618 620 2.237751 CGGCGGCTGAACCTAATCG 61.238 63.158 7.61 0.00 35.61 3.34
619 621 1.153429 GGCGGCTGAACCTAATCGT 60.153 57.895 0.00 0.00 35.61 3.73
620 622 0.743345 GGCGGCTGAACCTAATCGTT 60.743 55.000 0.00 0.00 35.61 3.85
621 623 1.084289 GCGGCTGAACCTAATCGTTT 58.916 50.000 0.00 0.00 35.61 3.60
622 624 2.273557 GCGGCTGAACCTAATCGTTTA 58.726 47.619 0.00 0.00 35.61 2.01
623 625 2.030091 GCGGCTGAACCTAATCGTTTAC 59.970 50.000 0.00 0.00 35.61 2.01
624 626 2.606272 CGGCTGAACCTAATCGTTTACC 59.394 50.000 0.00 0.00 35.61 2.85
625 627 3.602483 GGCTGAACCTAATCGTTTACCA 58.398 45.455 0.00 0.00 34.51 3.25
626 628 4.196971 GGCTGAACCTAATCGTTTACCAT 58.803 43.478 0.00 0.00 34.51 3.55
627 629 5.362263 GGCTGAACCTAATCGTTTACCATA 58.638 41.667 0.00 0.00 34.51 2.74
628 630 5.995897 GGCTGAACCTAATCGTTTACCATAT 59.004 40.000 0.00 0.00 34.51 1.78
629 631 7.156673 GGCTGAACCTAATCGTTTACCATATA 58.843 38.462 0.00 0.00 34.51 0.86
630 632 7.658575 GGCTGAACCTAATCGTTTACCATATAA 59.341 37.037 0.00 0.00 34.51 0.98
631 633 9.216117 GCTGAACCTAATCGTTTACCATATAAT 57.784 33.333 0.00 0.00 0.00 1.28
642 644 9.131416 TCGTTTACCATATAATGTACATTAGCG 57.869 33.333 27.40 19.06 36.79 4.26
643 645 7.896274 CGTTTACCATATAATGTACATTAGCGC 59.104 37.037 27.40 0.00 36.79 5.92
644 646 8.714179 GTTTACCATATAATGTACATTAGCGCA 58.286 33.333 27.40 15.76 36.79 6.09
645 647 6.721571 ACCATATAATGTACATTAGCGCAC 57.278 37.500 27.40 0.00 36.79 5.34
646 648 5.347635 ACCATATAATGTACATTAGCGCACG 59.652 40.000 27.40 16.72 36.79 5.34
647 649 3.788434 ATAATGTACATTAGCGCACGC 57.212 42.857 27.40 6.99 36.79 5.34
648 650 1.519343 TAATGTACATTAGCGCACGCG 59.481 47.619 21.73 3.53 37.94 6.01
649 651 2.795331 TAATGTACATTAGCGCACGCGA 60.795 45.455 21.73 1.60 37.94 5.87
650 652 4.628446 TAATGTACATTAGCGCACGCGAG 61.628 47.826 21.73 5.97 37.94 5.03
657 659 4.064491 GCGCACGCGAGGATATGC 62.064 66.667 15.93 10.53 42.83 3.14
658 660 2.658268 CGCACGCGAGGATATGCA 60.658 61.111 15.93 0.00 42.83 3.96
659 661 2.023771 CGCACGCGAGGATATGCAT 61.024 57.895 15.93 3.79 42.83 3.96
660 662 1.560004 CGCACGCGAGGATATGCATT 61.560 55.000 15.93 0.00 42.83 3.56
661 663 1.428448 GCACGCGAGGATATGCATTA 58.572 50.000 15.93 0.00 38.00 1.90
662 664 1.798223 GCACGCGAGGATATGCATTAA 59.202 47.619 15.93 0.00 38.00 1.40
663 665 2.416547 GCACGCGAGGATATGCATTAAT 59.583 45.455 15.93 0.00 38.00 1.40
664 666 3.484229 GCACGCGAGGATATGCATTAATC 60.484 47.826 15.93 2.22 38.00 1.75
665 667 3.679502 CACGCGAGGATATGCATTAATCA 59.320 43.478 15.93 0.00 0.00 2.57
666 668 4.152223 CACGCGAGGATATGCATTAATCAA 59.848 41.667 15.93 0.00 0.00 2.57
667 669 4.389992 ACGCGAGGATATGCATTAATCAAG 59.610 41.667 15.93 0.00 0.00 3.02
668 670 4.389992 CGCGAGGATATGCATTAATCAAGT 59.610 41.667 3.54 0.00 0.00 3.16
669 671 5.106948 CGCGAGGATATGCATTAATCAAGTT 60.107 40.000 3.54 0.00 0.00 2.66
670 672 6.082338 GCGAGGATATGCATTAATCAAGTTG 58.918 40.000 3.54 0.00 0.00 3.16
671 673 6.073058 GCGAGGATATGCATTAATCAAGTTGA 60.073 38.462 8.27 8.27 0.00 3.18
672 674 7.520453 GCGAGGATATGCATTAATCAAGTTGAA 60.520 37.037 10.14 0.00 0.00 2.69
673 675 7.800380 CGAGGATATGCATTAATCAAGTTGAAC 59.200 37.037 10.14 0.00 0.00 3.18
674 676 8.757982 AGGATATGCATTAATCAAGTTGAACT 57.242 30.769 10.14 2.90 0.00 3.01
675 677 9.851686 AGGATATGCATTAATCAAGTTGAACTA 57.148 29.630 10.14 1.89 0.00 2.24
676 678 9.884465 GGATATGCATTAATCAAGTTGAACTAC 57.116 33.333 10.14 0.00 0.00 2.73
677 679 9.884465 GATATGCATTAATCAAGTTGAACTACC 57.116 33.333 10.14 0.00 0.00 3.18
678 680 7.944729 ATGCATTAATCAAGTTGAACTACCT 57.055 32.000 10.14 0.00 0.00 3.08
680 682 9.632638 ATGCATTAATCAAGTTGAACTACCTAT 57.367 29.630 10.14 0.00 0.00 2.57
692 694 9.869667 AGTTGAACTACCTATATATCTGTGACT 57.130 33.333 0.00 0.00 0.00 3.41
693 695 9.900710 GTTGAACTACCTATATATCTGTGACTG 57.099 37.037 0.00 0.00 0.00 3.51
694 696 9.642343 TTGAACTACCTATATATCTGTGACTGT 57.358 33.333 0.00 0.00 0.00 3.55
695 697 9.286170 TGAACTACCTATATATCTGTGACTGTC 57.714 37.037 0.00 0.00 0.00 3.51
696 698 9.509956 GAACTACCTATATATCTGTGACTGTCT 57.490 37.037 9.51 0.00 0.00 3.41
697 699 8.856153 ACTACCTATATATCTGTGACTGTCTG 57.144 38.462 9.51 0.02 0.00 3.51
698 700 7.885922 ACTACCTATATATCTGTGACTGTCTGG 59.114 40.741 9.51 0.00 0.00 3.86
699 701 5.478679 ACCTATATATCTGTGACTGTCTGGC 59.521 44.000 9.51 0.51 0.00 4.85
700 702 4.881019 ATATATCTGTGACTGTCTGGCC 57.119 45.455 9.51 0.00 0.00 5.36
701 703 0.817654 TATCTGTGACTGTCTGGCCG 59.182 55.000 9.51 0.00 0.00 6.13
702 704 1.892819 ATCTGTGACTGTCTGGCCGG 61.893 60.000 4.71 4.71 0.00 6.13
703 705 2.842462 TGTGACTGTCTGGCCGGT 60.842 61.111 12.43 0.00 0.00 5.28
704 706 1.532078 TGTGACTGTCTGGCCGGTA 60.532 57.895 12.43 0.97 0.00 4.02
705 707 1.080025 GTGACTGTCTGGCCGGTAC 60.080 63.158 12.43 9.23 0.00 3.34
729 731 4.986587 ACGCAGCGACGCACGTAA 62.987 61.111 30.82 0.00 40.59 3.18
730 732 3.758777 CGCAGCGACGCACGTAAA 61.759 61.111 23.70 0.00 44.60 2.01
731 733 2.547305 GCAGCGACGCACGTAAAA 59.453 55.556 23.70 0.00 44.60 1.52
732 734 1.131826 GCAGCGACGCACGTAAAAT 59.868 52.632 23.70 0.00 44.60 1.82
733 735 0.367548 GCAGCGACGCACGTAAAATA 59.632 50.000 23.70 0.00 44.60 1.40
734 736 1.845489 GCAGCGACGCACGTAAAATAC 60.845 52.381 23.70 0.00 44.60 1.89
735 737 1.387420 CAGCGACGCACGTAAAATACA 59.613 47.619 23.70 0.00 44.60 2.29
736 738 1.387756 AGCGACGCACGTAAAATACAC 59.612 47.619 23.70 0.00 44.60 2.90
737 739 1.124658 GCGACGCACGTAAAATACACA 59.875 47.619 16.42 0.00 44.60 3.72
738 740 2.410006 GCGACGCACGTAAAATACACAA 60.410 45.455 16.42 0.00 44.60 3.33
739 741 3.392141 CGACGCACGTAAAATACACAAG 58.608 45.455 0.00 0.00 37.22 3.16
740 742 3.121261 CGACGCACGTAAAATACACAAGT 60.121 43.478 0.00 0.00 37.22 3.16
741 743 4.606673 CGACGCACGTAAAATACACAAGTT 60.607 41.667 0.00 0.00 37.22 2.66
742 744 4.520078 ACGCACGTAAAATACACAAGTTG 58.480 39.130 0.00 0.00 0.00 3.16
743 745 4.034279 ACGCACGTAAAATACACAAGTTGT 59.966 37.500 1.64 1.64 42.84 3.32
744 746 5.233902 ACGCACGTAAAATACACAAGTTGTA 59.766 36.000 8.49 0.00 45.03 2.41
755 757 5.403897 ACACAAGTTGTATATATGCACGC 57.596 39.130 8.49 0.35 36.32 5.34
756 758 4.873259 ACACAAGTTGTATATATGCACGCA 59.127 37.500 8.49 0.00 36.32 5.24
757 759 5.197549 CACAAGTTGTATATATGCACGCAC 58.802 41.667 8.49 0.00 0.00 5.34
758 760 5.006649 CACAAGTTGTATATATGCACGCACT 59.993 40.000 8.49 2.25 0.00 4.40
759 761 5.006649 ACAAGTTGTATATATGCACGCACTG 59.993 40.000 6.75 4.71 0.00 3.66
760 762 4.693283 AGTTGTATATATGCACGCACTGT 58.307 39.130 2.64 0.00 0.00 3.55
761 763 5.116180 AGTTGTATATATGCACGCACTGTT 58.884 37.500 2.64 0.00 0.00 3.16
762 764 6.277605 AGTTGTATATATGCACGCACTGTTA 58.722 36.000 2.64 0.00 0.00 2.41
763 765 6.759356 AGTTGTATATATGCACGCACTGTTAA 59.241 34.615 2.64 0.00 0.00 2.01
764 766 7.441157 AGTTGTATATATGCACGCACTGTTAAT 59.559 33.333 2.64 0.00 0.00 1.40
765 767 7.346208 TGTATATATGCACGCACTGTTAATC 57.654 36.000 0.00 0.00 0.00 1.75
766 768 5.862924 ATATATGCACGCACTGTTAATCC 57.137 39.130 0.00 0.00 0.00 3.01
767 769 0.726827 ATGCACGCACTGTTAATCCG 59.273 50.000 0.00 0.00 0.00 4.18
768 770 0.601576 TGCACGCACTGTTAATCCGT 60.602 50.000 0.00 0.00 0.00 4.69
769 771 3.947279 CACGCACTGTTAATCCGTG 57.053 52.632 0.00 0.00 42.36 4.94
770 772 3.898380 ACGCACTGTTAATCCGTGA 57.102 47.368 6.09 0.00 34.01 4.35
771 773 2.157834 ACGCACTGTTAATCCGTGAA 57.842 45.000 6.09 0.00 34.01 3.18
772 774 2.695359 ACGCACTGTTAATCCGTGAAT 58.305 42.857 6.09 0.00 34.01 2.57
773 775 2.671396 ACGCACTGTTAATCCGTGAATC 59.329 45.455 6.09 0.00 34.01 2.52
774 776 2.930040 CGCACTGTTAATCCGTGAATCT 59.070 45.455 6.09 0.00 34.01 2.40
775 777 3.242091 CGCACTGTTAATCCGTGAATCTG 60.242 47.826 6.09 0.00 34.01 2.90
776 778 3.485877 GCACTGTTAATCCGTGAATCTGC 60.486 47.826 6.09 0.00 34.01 4.26
777 779 3.063997 CACTGTTAATCCGTGAATCTGCC 59.936 47.826 0.00 0.00 34.01 4.85
778 780 3.055094 ACTGTTAATCCGTGAATCTGCCT 60.055 43.478 0.00 0.00 0.00 4.75
779 781 4.161565 ACTGTTAATCCGTGAATCTGCCTA 59.838 41.667 0.00 0.00 0.00 3.93
780 782 4.439057 TGTTAATCCGTGAATCTGCCTAC 58.561 43.478 0.00 0.00 0.00 3.18
781 783 4.161565 TGTTAATCCGTGAATCTGCCTACT 59.838 41.667 0.00 0.00 0.00 2.57
782 784 3.460857 AATCCGTGAATCTGCCTACTC 57.539 47.619 0.00 0.00 0.00 2.59
783 785 2.145397 TCCGTGAATCTGCCTACTCT 57.855 50.000 0.00 0.00 0.00 3.24
784 786 2.457598 TCCGTGAATCTGCCTACTCTT 58.542 47.619 0.00 0.00 0.00 2.85
785 787 2.166459 TCCGTGAATCTGCCTACTCTTG 59.834 50.000 0.00 0.00 0.00 3.02
786 788 2.544685 CGTGAATCTGCCTACTCTTGG 58.455 52.381 0.00 0.00 0.00 3.61
794 796 2.317530 GCCTACTCTTGGCCTACTTG 57.682 55.000 3.32 0.00 44.32 3.16
795 797 1.134371 GCCTACTCTTGGCCTACTTGG 60.134 57.143 3.32 0.00 44.32 3.61
796 798 2.188817 CCTACTCTTGGCCTACTTGGT 58.811 52.381 3.32 0.00 38.35 3.67
797 799 2.168728 CCTACTCTTGGCCTACTTGGTC 59.831 54.545 3.32 0.00 41.87 4.02
798 800 0.984995 ACTCTTGGCCTACTTGGTCC 59.015 55.000 3.32 0.00 40.46 4.46
799 801 1.280457 CTCTTGGCCTACTTGGTCCT 58.720 55.000 3.32 0.00 40.46 3.85
800 802 0.984230 TCTTGGCCTACTTGGTCCTG 59.016 55.000 3.32 0.00 40.46 3.86
801 803 0.693049 CTTGGCCTACTTGGTCCTGT 59.307 55.000 3.32 0.00 40.46 4.00
802 804 1.906574 CTTGGCCTACTTGGTCCTGTA 59.093 52.381 3.32 0.00 40.46 2.74
803 805 2.032965 TGGCCTACTTGGTCCTGTAA 57.967 50.000 3.32 0.00 40.46 2.41
804 806 2.557869 TGGCCTACTTGGTCCTGTAAT 58.442 47.619 3.32 0.00 40.46 1.89
805 807 2.504175 TGGCCTACTTGGTCCTGTAATC 59.496 50.000 3.32 0.00 40.46 1.75
806 808 2.158798 GGCCTACTTGGTCCTGTAATCC 60.159 54.545 0.00 0.00 38.35 3.01
807 809 2.772515 GCCTACTTGGTCCTGTAATCCT 59.227 50.000 0.00 0.00 38.35 3.24
808 810 3.200165 GCCTACTTGGTCCTGTAATCCTT 59.800 47.826 0.00 0.00 38.35 3.36
809 811 4.770795 CCTACTTGGTCCTGTAATCCTTG 58.229 47.826 0.00 0.00 0.00 3.61
810 812 3.073274 ACTTGGTCCTGTAATCCTTGC 57.927 47.619 0.00 0.00 0.00 4.01
811 813 2.290960 ACTTGGTCCTGTAATCCTTGCC 60.291 50.000 0.00 0.00 0.00 4.52
812 814 1.668826 TGGTCCTGTAATCCTTGCCT 58.331 50.000 0.00 0.00 0.00 4.75
813 815 1.992557 TGGTCCTGTAATCCTTGCCTT 59.007 47.619 0.00 0.00 0.00 4.35
814 816 2.290896 TGGTCCTGTAATCCTTGCCTTG 60.291 50.000 0.00 0.00 0.00 3.61
815 817 1.745653 GTCCTGTAATCCTTGCCTTGC 59.254 52.381 0.00 0.00 0.00 4.01
816 818 1.106285 CCTGTAATCCTTGCCTTGCC 58.894 55.000 0.00 0.00 0.00 4.52
817 819 1.341383 CCTGTAATCCTTGCCTTGCCT 60.341 52.381 0.00 0.00 0.00 4.75
818 820 2.092429 CCTGTAATCCTTGCCTTGCCTA 60.092 50.000 0.00 0.00 0.00 3.93
819 821 3.209410 CTGTAATCCTTGCCTTGCCTAG 58.791 50.000 0.00 0.00 0.00 3.02
820 822 2.576191 TGTAATCCTTGCCTTGCCTAGT 59.424 45.455 0.00 0.00 0.00 2.57
821 823 2.907458 AATCCTTGCCTTGCCTAGTT 57.093 45.000 0.00 0.00 0.00 2.24
822 824 2.426842 ATCCTTGCCTTGCCTAGTTC 57.573 50.000 0.00 0.00 0.00 3.01
823 825 1.362224 TCCTTGCCTTGCCTAGTTCT 58.638 50.000 0.00 0.00 0.00 3.01
824 826 1.003580 TCCTTGCCTTGCCTAGTTCTG 59.996 52.381 0.00 0.00 0.00 3.02
825 827 1.457346 CTTGCCTTGCCTAGTTCTGG 58.543 55.000 0.00 0.00 0.00 3.86
826 828 0.771127 TTGCCTTGCCTAGTTCTGGT 59.229 50.000 0.00 0.00 0.00 4.00
827 829 0.324943 TGCCTTGCCTAGTTCTGGTC 59.675 55.000 0.00 0.00 0.00 4.02
828 830 0.393132 GCCTTGCCTAGTTCTGGTCC 60.393 60.000 0.00 0.00 0.00 4.46
829 831 0.984230 CCTTGCCTAGTTCTGGTCCA 59.016 55.000 0.00 0.00 0.00 4.02
830 832 1.561542 CCTTGCCTAGTTCTGGTCCAT 59.438 52.381 0.00 0.00 0.00 3.41
831 833 2.420687 CCTTGCCTAGTTCTGGTCCATC 60.421 54.545 0.00 0.00 0.00 3.51
832 834 0.824109 TGCCTAGTTCTGGTCCATCG 59.176 55.000 0.00 0.00 0.00 3.84
833 835 0.105039 GCCTAGTTCTGGTCCATCGG 59.895 60.000 0.00 0.00 0.00 4.18
834 836 1.486211 CCTAGTTCTGGTCCATCGGT 58.514 55.000 0.00 0.00 0.00 4.69
835 837 1.831736 CCTAGTTCTGGTCCATCGGTT 59.168 52.381 0.00 0.00 0.00 4.44
836 838 2.236395 CCTAGTTCTGGTCCATCGGTTT 59.764 50.000 0.00 0.00 0.00 3.27
837 839 2.185004 AGTTCTGGTCCATCGGTTTG 57.815 50.000 0.00 0.00 0.00 2.93
838 840 1.697432 AGTTCTGGTCCATCGGTTTGA 59.303 47.619 0.00 0.00 0.00 2.69
839 841 2.305927 AGTTCTGGTCCATCGGTTTGAT 59.694 45.455 0.00 0.00 38.01 2.57
840 842 2.678336 GTTCTGGTCCATCGGTTTGATC 59.322 50.000 0.00 0.00 34.13 2.92
841 843 2.187958 TCTGGTCCATCGGTTTGATCT 58.812 47.619 0.00 0.00 34.13 2.75
842 844 2.168521 TCTGGTCCATCGGTTTGATCTC 59.831 50.000 0.00 0.00 34.13 2.75
843 845 1.209504 TGGTCCATCGGTTTGATCTCC 59.790 52.381 0.00 0.00 34.13 3.71
844 846 1.486726 GGTCCATCGGTTTGATCTCCT 59.513 52.381 0.00 0.00 34.13 3.69
845 847 2.483889 GGTCCATCGGTTTGATCTCCTC 60.484 54.545 0.00 0.00 34.13 3.71
846 848 1.409064 TCCATCGGTTTGATCTCCTCG 59.591 52.381 0.00 0.00 34.13 4.63
847 849 1.137086 CCATCGGTTTGATCTCCTCGT 59.863 52.381 0.00 0.00 34.13 4.18
848 850 2.196749 CATCGGTTTGATCTCCTCGTG 58.803 52.381 0.00 0.00 34.13 4.35
849 851 0.530744 TCGGTTTGATCTCCTCGTGG 59.469 55.000 0.00 0.00 0.00 4.94
850 852 1.084370 CGGTTTGATCTCCTCGTGGC 61.084 60.000 0.00 0.00 0.00 5.01
851 853 0.250513 GGTTTGATCTCCTCGTGGCT 59.749 55.000 0.00 0.00 0.00 4.75
852 854 1.363744 GTTTGATCTCCTCGTGGCTG 58.636 55.000 0.00 0.00 0.00 4.85
853 855 0.391661 TTTGATCTCCTCGTGGCTGC 60.392 55.000 0.00 0.00 0.00 5.25
854 856 2.107953 GATCTCCTCGTGGCTGCC 59.892 66.667 12.87 12.87 0.00 4.85
855 857 2.364842 ATCTCCTCGTGGCTGCCT 60.365 61.111 21.03 0.00 0.00 4.75
856 858 2.362329 GATCTCCTCGTGGCTGCCTC 62.362 65.000 21.03 15.65 0.00 4.70
857 859 2.870035 ATCTCCTCGTGGCTGCCTCT 62.870 60.000 21.03 0.00 0.00 3.69
858 860 3.368190 CTCCTCGTGGCTGCCTCTG 62.368 68.421 21.03 12.39 0.00 3.35
867 869 4.079850 CTGCCTCTGCGTGCCTCT 62.080 66.667 0.00 0.00 41.78 3.69
868 870 4.074526 TGCCTCTGCGTGCCTCTC 62.075 66.667 0.00 0.00 41.78 3.20
870 872 4.504916 CCTCTGCGTGCCTCTCGG 62.505 72.222 0.00 0.00 0.00 4.63
886 888 6.854496 CCTCTCGGCTACAGTCTATATATC 57.146 45.833 0.00 0.00 0.00 1.63
887 889 5.761234 CCTCTCGGCTACAGTCTATATATCC 59.239 48.000 0.00 0.00 0.00 2.59
888 890 5.682659 TCTCGGCTACAGTCTATATATCCC 58.317 45.833 0.00 0.00 0.00 3.85
889 891 5.429109 TCTCGGCTACAGTCTATATATCCCT 59.571 44.000 0.00 0.00 0.00 4.20
890 892 5.682659 TCGGCTACAGTCTATATATCCCTC 58.317 45.833 0.00 0.00 0.00 4.30
891 893 4.512198 CGGCTACAGTCTATATATCCCTCG 59.488 50.000 0.00 0.00 0.00 4.63
892 894 4.822896 GGCTACAGTCTATATATCCCTCGG 59.177 50.000 0.00 0.00 0.00 4.63
893 895 4.276431 GCTACAGTCTATATATCCCTCGGC 59.724 50.000 0.00 0.00 0.00 5.54
894 896 4.594675 ACAGTCTATATATCCCTCGGCT 57.405 45.455 0.00 0.00 0.00 5.52
895 897 4.528920 ACAGTCTATATATCCCTCGGCTC 58.471 47.826 0.00 0.00 0.00 4.70
896 898 3.562141 CAGTCTATATATCCCTCGGCTCG 59.438 52.174 0.00 0.00 0.00 5.03
897 899 2.879646 GTCTATATATCCCTCGGCTCGG 59.120 54.545 0.00 0.00 0.00 4.63
898 900 2.508716 TCTATATATCCCTCGGCTCGGT 59.491 50.000 0.00 0.00 0.00 4.69
899 901 3.713248 TCTATATATCCCTCGGCTCGGTA 59.287 47.826 0.00 0.00 0.00 4.02
900 902 2.119801 TATATCCCTCGGCTCGGTAC 57.880 55.000 0.00 0.00 0.00 3.34
918 920 4.186926 GGTACGATGGGAGTAGAAAAACC 58.813 47.826 0.00 0.00 0.00 3.27
969 971 1.135083 AGACACAAGAAGATACGCCCG 60.135 52.381 0.00 0.00 0.00 6.13
971 973 1.153429 ACAAGAAGATACGCCCGCC 60.153 57.895 0.00 0.00 0.00 6.13
1038 1045 2.108514 CGACCACGCATCAGCCATT 61.109 57.895 0.00 0.00 37.52 3.16
1053 1060 1.179152 CCATTGCTGATGTTGCCTCA 58.821 50.000 0.00 0.00 33.71 3.86
1092 1099 1.134901 CGACGTGTCTCCTTCTCCG 59.865 63.158 0.00 0.00 0.00 4.63
1121 1135 1.851021 CTGCACGCGGATTTGGTTCA 61.851 55.000 12.47 0.00 0.00 3.18
1167 1181 4.760715 GCCCGAGATCTACTTGACTATGTA 59.239 45.833 0.00 0.00 31.94 2.29
1293 1308 4.717313 GGTCACGGCCTTCACCCC 62.717 72.222 0.00 0.00 0.00 4.95
1294 1309 4.717313 GTCACGGCCTTCACCCCC 62.717 72.222 0.00 0.00 0.00 5.40
1328 1343 5.698545 AGAAACGTTTCTTCAATCTCTCCAG 59.301 40.000 32.60 0.00 44.70 3.86
1349 1364 1.289800 GGAGTTTTCGTCCGTGCCTC 61.290 60.000 0.00 0.00 0.00 4.70
1364 1379 1.742768 CCTCGCTCCCGCTCTTAAT 59.257 57.895 0.00 0.00 0.00 1.40
1366 1381 0.385751 CTCGCTCCCGCTCTTAATCA 59.614 55.000 0.00 0.00 0.00 2.57
1438 1456 1.513158 CAAGACACCTCCGCGATCT 59.487 57.895 8.23 0.00 0.00 2.75
1492 7013 2.363276 TACCGCCGACCATGTCCT 60.363 61.111 0.00 0.00 0.00 3.85
1536 7057 2.421424 GTCAAATGGCAGGAGACATGTC 59.579 50.000 18.47 18.47 44.76 3.06
1764 7286 4.576463 GGCGAACAACATATTCTCCAGATT 59.424 41.667 0.00 0.00 32.26 2.40
1790 7312 1.153369 CCCGCCTTGATCATCACGT 60.153 57.895 0.00 0.00 0.00 4.49
1860 7382 4.674281 TGACAAAATTAAAGGCCGGTTT 57.326 36.364 1.90 0.00 0.00 3.27
1869 7391 1.535204 AAGGCCGGTTTTGCATGGAG 61.535 55.000 1.90 0.00 0.00 3.86
1880 7402 2.785868 GCATGGAGGAATGCGTCTT 58.214 52.632 0.00 0.00 43.22 3.01
1888 7410 2.102252 GAGGAATGCGTCTTGGAGATCT 59.898 50.000 0.00 0.00 0.00 2.75
1986 7508 1.134228 AGGTTGTCCCGGTAACAAGT 58.866 50.000 17.30 7.61 37.30 3.16
2004 7526 7.657023 AACAAGTATCGGAGGTAATACTCTT 57.343 36.000 0.00 0.00 37.64 2.85
2024 7546 7.907389 ACTCTTTTCACTACTATTGACCATGA 58.093 34.615 0.00 0.00 0.00 3.07
2035 7557 7.172868 ACTATTGACCATGAAATTTGCATCA 57.827 32.000 0.00 0.00 0.00 3.07
2069 7591 4.838423 TGTCTCAGTTTATGTGAGGGAGAA 59.162 41.667 0.47 0.00 41.62 2.87
2118 7650 1.262151 GCAACACCATTGTACGTCGTT 59.738 47.619 1.78 0.00 33.55 3.85
2129 7661 0.030504 TACGTCGTTGGCGTCTCAAA 59.969 50.000 1.78 0.00 42.85 2.69
2156 7688 5.997384 ATTCTCCTTTGTACTACGACCTT 57.003 39.130 0.00 0.00 0.00 3.50
2166 7698 2.522185 ACTACGACCTTTCTAGTGGCA 58.478 47.619 0.00 0.00 0.00 4.92
2181 7713 3.844640 AGTGGCAAAAGGTTCCTAACAT 58.155 40.909 0.00 0.00 0.00 2.71
2218 7750 1.900486 TGATGGTTGCCATGATTGCAA 59.100 42.857 0.00 0.00 45.26 4.08
2228 7760 1.135199 CATGATTGCAACTGTGGCCTC 60.135 52.381 0.00 0.00 0.00 4.70
2243 7775 6.211584 ACTGTGGCCTCGTTTATCATATCTAT 59.788 38.462 3.32 0.00 0.00 1.98
2272 7804 2.546368 GTCATTGTGGTGACTTGCGTAA 59.454 45.455 0.08 0.00 43.96 3.18
2310 7843 7.387948 TCACCTAAGTTTCTAAAGCAGATTCAC 59.612 37.037 0.00 0.00 31.77 3.18
2316 7849 4.408182 TCTAAAGCAGATTCACCCTAGC 57.592 45.455 0.00 0.00 0.00 3.42
2327 7888 0.474184 CACCCTAGCCGGATGGAATT 59.526 55.000 5.05 0.00 37.49 2.17
2344 7905 9.178758 GGATGGAATTTGTAAAACAGAGATAGT 57.821 33.333 0.00 0.00 0.00 2.12
2374 7935 9.391006 TGATGAGATTACTTGGGTATTTTGTAC 57.609 33.333 0.00 0.00 0.00 2.90
2375 7936 9.614792 GATGAGATTACTTGGGTATTTTGTACT 57.385 33.333 0.00 0.00 0.00 2.73
2376 7937 8.786826 TGAGATTACTTGGGTATTTTGTACTG 57.213 34.615 0.00 0.00 0.00 2.74
2399 7960 2.019807 ACCTCCTTCGGTTTGGTCTA 57.980 50.000 0.00 0.00 31.94 2.59
2438 7999 2.670905 TGATATCTTTTGACACCGCGTG 59.329 45.455 4.92 6.23 39.75 5.34
2491 8052 9.948964 ATGTTATGCATGTCTATATATGTGTGT 57.051 29.630 10.16 0.00 36.26 3.72
2507 8068 1.287425 GTGTTACCGCTGCCTCATAC 58.713 55.000 0.00 0.00 0.00 2.39
2568 8129 6.749923 AGATCCACTACTTTTCTTTCATGC 57.250 37.500 0.00 0.00 0.00 4.06
2625 8207 4.448210 ACCGCTAACCCAATTATACACAG 58.552 43.478 0.00 0.00 0.00 3.66
2698 8283 3.859411 AAAGAAACAAACAAGTCGGCA 57.141 38.095 0.00 0.00 0.00 5.69
2716 8301 3.247648 CGGCATAAAAACATACTCCCTCG 59.752 47.826 0.00 0.00 0.00 4.63
2779 8364 7.556733 ACTAAAACCACGACACTTATTTTGA 57.443 32.000 0.00 0.00 0.00 2.69
2784 8369 4.992319 ACCACGACACTTATTTTGAATCGA 59.008 37.500 0.00 0.00 32.63 3.59
2791 8376 5.123979 ACACTTATTTTGAATCGAAGGGAGC 59.876 40.000 0.00 0.00 0.00 4.70
2793 8378 5.355350 ACTTATTTTGAATCGAAGGGAGCAG 59.645 40.000 0.00 0.00 0.00 4.24
2814 8399 6.270927 AGCAGTAGATTACATACCATGTGGAT 59.729 38.462 5.96 0.00 44.60 3.41
2867 8453 2.102252 GTCATACTCTTCCTCTGCCCTG 59.898 54.545 0.00 0.00 0.00 4.45
2871 8457 1.359474 ACTCTTCCTCTGCCCTGACTA 59.641 52.381 0.00 0.00 0.00 2.59
2872 8458 1.754226 CTCTTCCTCTGCCCTGACTAC 59.246 57.143 0.00 0.00 0.00 2.73
2873 8459 1.359474 TCTTCCTCTGCCCTGACTACT 59.641 52.381 0.00 0.00 0.00 2.57
2874 8460 2.581246 TCTTCCTCTGCCCTGACTACTA 59.419 50.000 0.00 0.00 0.00 1.82
2875 8461 3.205507 TCTTCCTCTGCCCTGACTACTAT 59.794 47.826 0.00 0.00 0.00 2.12
2876 8462 4.415846 TCTTCCTCTGCCCTGACTACTATA 59.584 45.833 0.00 0.00 0.00 1.31
2927 8516 8.690884 TCAGATATAGGAGAGAAAAGTCACAAG 58.309 37.037 0.00 0.00 0.00 3.16
2933 8522 1.531578 GAGAAAAGTCACAAGACCCGC 59.468 52.381 0.00 0.00 46.15 6.13
2940 8529 1.594293 CACAAGACCCGCACTTCGT 60.594 57.895 0.00 0.00 36.19 3.85
2962 8551 7.101054 TCGTTACCTAGCAAACACAATATTCT 58.899 34.615 6.33 0.00 0.00 2.40
2978 8567 7.010923 CACAATATTCTGAGTCCTACTCTTTGC 59.989 40.741 8.42 0.00 45.27 3.68
2985 8574 0.530744 TCCTACTCTTTGCGCATCGT 59.469 50.000 12.75 8.77 0.00 3.73
2996 8585 2.108514 CGCATCGTTGATGGGTGCT 61.109 57.895 13.77 0.00 44.41 4.40
3013 8602 1.451567 CTAGTGGGTCGAGCGAGGA 60.452 63.158 8.77 0.00 0.00 3.71
3040 8693 0.251564 TTGGGGCCGAATTGTGATGT 60.252 50.000 0.00 0.00 0.00 3.06
3052 8705 5.976534 CGAATTGTGATGTTTTTCAAGGTCA 59.023 36.000 0.00 0.00 0.00 4.02
3056 8709 5.649557 TGTGATGTTTTTCAAGGTCAAGTG 58.350 37.500 0.00 0.00 0.00 3.16
3079 8732 9.726438 AGTGCTTTTCTTAACAATGTATAGTCT 57.274 29.630 0.00 0.00 0.00 3.24
3095 8748 8.014070 TGTATAGTCTAACCAAAATCGATCCA 57.986 34.615 0.00 0.00 0.00 3.41
3103 8756 6.624352 AACCAAAATCGATCCAGATGTATG 57.376 37.500 0.00 0.00 0.00 2.39
3108 8761 5.815233 AATCGATCCAGATGTATGACCTT 57.185 39.130 0.00 0.00 0.00 3.50
3124 8777 8.421002 TGTATGACCTTGATGATCGAGATAAAA 58.579 33.333 11.28 0.00 29.08 1.52
3125 8778 9.429359 GTATGACCTTGATGATCGAGATAAAAT 57.571 33.333 11.28 1.15 29.08 1.82
3157 8810 6.601613 TGTTATTGTGGTGTGTTCTTTCTTCT 59.398 34.615 0.00 0.00 0.00 2.85
3158 8811 7.122055 TGTTATTGTGGTGTGTTCTTTCTTCTT 59.878 33.333 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 1.777272 GCTCCACTGGGGGATTATTCT 59.223 52.381 0.00 0.00 36.40 2.40
46 47 2.586838 TGGATCAACCCAATCCATTCCT 59.413 45.455 0.74 0.00 46.05 3.36
47 48 3.030873 TGGATCAACCCAATCCATTCC 57.969 47.619 0.74 0.00 46.05 3.01
52 53 2.369394 GTCACTGGATCAACCCAATCC 58.631 52.381 0.00 0.00 42.62 3.01
53 54 2.009774 CGTCACTGGATCAACCCAATC 58.990 52.381 0.00 0.00 35.47 2.67
54 55 1.340017 CCGTCACTGGATCAACCCAAT 60.340 52.381 0.00 0.00 35.47 3.16
55 56 0.036164 CCGTCACTGGATCAACCCAA 59.964 55.000 0.00 0.00 35.47 4.12
56 57 0.834261 TCCGTCACTGGATCAACCCA 60.834 55.000 0.00 0.00 38.00 4.51
57 58 0.541863 ATCCGTCACTGGATCAACCC 59.458 55.000 0.00 0.00 45.80 4.11
64 65 1.550130 GGGTTGGATCCGTCACTGGA 61.550 60.000 7.39 0.00 43.58 3.86
65 66 1.078426 GGGTTGGATCCGTCACTGG 60.078 63.158 7.39 0.00 0.00 4.00
66 67 0.036164 TTGGGTTGGATCCGTCACTG 59.964 55.000 7.39 0.00 0.00 3.66
67 68 0.036306 GTTGGGTTGGATCCGTCACT 59.964 55.000 7.39 0.00 0.00 3.41
68 69 0.250553 TGTTGGGTTGGATCCGTCAC 60.251 55.000 7.39 4.22 0.00 3.67
69 70 0.036164 CTGTTGGGTTGGATCCGTCA 59.964 55.000 7.39 0.00 0.00 4.35
70 71 0.676782 CCTGTTGGGTTGGATCCGTC 60.677 60.000 7.39 2.19 0.00 4.79
71 72 1.131303 TCCTGTTGGGTTGGATCCGT 61.131 55.000 7.39 0.00 36.25 4.69
72 73 0.037590 TTCCTGTTGGGTTGGATCCG 59.962 55.000 7.39 0.00 36.25 4.18
73 74 1.616994 CCTTCCTGTTGGGTTGGATCC 60.617 57.143 4.20 4.20 36.25 3.36
74 75 1.354368 TCCTTCCTGTTGGGTTGGATC 59.646 52.381 0.00 0.00 34.59 3.36
75 76 1.455822 TCCTTCCTGTTGGGTTGGAT 58.544 50.000 0.00 0.00 34.59 3.41
76 77 1.075374 CATCCTTCCTGTTGGGTTGGA 59.925 52.381 0.00 0.00 39.92 3.53
77 78 1.549203 CATCCTTCCTGTTGGGTTGG 58.451 55.000 0.00 0.00 36.25 3.77
78 79 1.549203 CCATCCTTCCTGTTGGGTTG 58.451 55.000 0.00 0.00 36.25 3.77
79 80 0.409484 CCCATCCTTCCTGTTGGGTT 59.591 55.000 0.00 0.00 43.25 4.11
80 81 2.087248 CCCATCCTTCCTGTTGGGT 58.913 57.895 0.00 0.00 43.25 4.51
82 83 1.380380 GGCCCATCCTTCCTGTTGG 60.380 63.158 0.00 0.00 0.00 3.77
83 84 0.251742 TTGGCCCATCCTTCCTGTTG 60.252 55.000 0.00 0.00 35.26 3.33
84 85 0.251787 GTTGGCCCATCCTTCCTGTT 60.252 55.000 0.00 0.00 35.26 3.16
85 86 1.384191 GTTGGCCCATCCTTCCTGT 59.616 57.895 0.00 0.00 35.26 4.00
86 87 0.251742 TTGTTGGCCCATCCTTCCTG 60.252 55.000 0.00 0.00 35.26 3.86
90 91 4.020307 CAGTTTTATTGTTGGCCCATCCTT 60.020 41.667 0.00 0.00 35.26 3.36
164 165 3.775316 GGGAGGAACAAATGAGGAGACTA 59.225 47.826 0.00 0.00 44.43 2.59
204 205 1.375908 GCAGCGTGGGAGACATCAA 60.376 57.895 0.00 0.00 0.00 2.57
296 297 1.889530 GACGGTTCTCCTCCAGGGTG 61.890 65.000 0.00 0.00 36.25 4.61
297 298 1.609794 GACGGTTCTCCTCCAGGGT 60.610 63.158 0.00 0.00 36.25 4.34
324 325 2.191128 AAAGCTCAAGAAGGCGACAT 57.809 45.000 0.00 0.00 0.00 3.06
336 337 1.089481 CCAATCGCGGCTAAAGCTCA 61.089 55.000 6.13 0.00 41.70 4.26
396 397 2.842394 CTAGCACTCTGGTGGCCACG 62.842 65.000 29.08 17.70 43.18 4.94
408 409 3.230134 CCTTATCTCTCAGCCTAGCACT 58.770 50.000 0.00 0.00 0.00 4.40
410 411 3.320610 ACCTTATCTCTCAGCCTAGCA 57.679 47.619 0.00 0.00 0.00 3.49
431 432 4.415150 CGCACATCACCCTGGCCT 62.415 66.667 3.32 0.00 0.00 5.19
457 459 1.228367 ATGCGATCAAGGCCCCATC 60.228 57.895 0.00 0.00 0.00 3.51
464 466 1.065273 GCAAGCCATGCGATCAAGG 59.935 57.895 0.00 0.00 46.87 3.61
480 482 1.977056 ACTATGGTCTATCGGTCGCA 58.023 50.000 0.00 0.00 0.00 5.10
483 485 3.856267 GCCGAAACTATGGTCTATCGGTC 60.856 52.174 22.75 15.39 42.59 4.79
489 491 0.748450 CCCGCCGAAACTATGGTCTA 59.252 55.000 0.00 0.00 0.00 2.59
544 546 6.074642 CGTTGCATGAAAAGTTATCGTACAA 58.925 36.000 0.00 0.00 0.00 2.41
549 551 4.078363 ACCGTTGCATGAAAAGTTATCG 57.922 40.909 0.00 0.00 0.00 2.92
551 553 4.518970 AGTGACCGTTGCATGAAAAGTTAT 59.481 37.500 0.00 0.00 0.00 1.89
552 554 3.880490 AGTGACCGTTGCATGAAAAGTTA 59.120 39.130 0.00 0.00 0.00 2.24
553 555 2.687935 AGTGACCGTTGCATGAAAAGTT 59.312 40.909 0.00 0.00 0.00 2.66
555 557 2.290367 TGAGTGACCGTTGCATGAAAAG 59.710 45.455 0.00 0.00 0.00 2.27
556 558 2.293170 TGAGTGACCGTTGCATGAAAA 58.707 42.857 0.00 0.00 0.00 2.29
557 559 1.960417 TGAGTGACCGTTGCATGAAA 58.040 45.000 0.00 0.00 0.00 2.69
558 560 1.960417 TTGAGTGACCGTTGCATGAA 58.040 45.000 0.00 0.00 0.00 2.57
559 561 2.076100 GATTGAGTGACCGTTGCATGA 58.924 47.619 0.00 0.00 0.00 3.07
560 562 1.201954 CGATTGAGTGACCGTTGCATG 60.202 52.381 0.00 0.00 0.00 4.06
561 563 1.078709 CGATTGAGTGACCGTTGCAT 58.921 50.000 0.00 0.00 0.00 3.96
562 564 0.032815 TCGATTGAGTGACCGTTGCA 59.967 50.000 0.00 0.00 0.00 4.08
563 565 1.061131 CATCGATTGAGTGACCGTTGC 59.939 52.381 0.00 0.00 0.00 4.17
564 566 1.660607 CCATCGATTGAGTGACCGTTG 59.339 52.381 0.00 0.00 0.00 4.10
565 567 1.548719 TCCATCGATTGAGTGACCGTT 59.451 47.619 0.00 0.00 0.00 4.44
566 568 1.135139 CTCCATCGATTGAGTGACCGT 59.865 52.381 16.43 0.00 0.00 4.83
567 569 1.536922 CCTCCATCGATTGAGTGACCG 60.537 57.143 21.33 5.74 0.00 4.79
568 570 1.808133 GCCTCCATCGATTGAGTGACC 60.808 57.143 21.33 6.79 0.00 4.02
569 571 1.576356 GCCTCCATCGATTGAGTGAC 58.424 55.000 21.33 9.72 0.00 3.67
570 572 0.103026 CGCCTCCATCGATTGAGTGA 59.897 55.000 21.33 2.81 0.00 3.41
571 573 1.493950 GCGCCTCCATCGATTGAGTG 61.494 60.000 21.33 15.41 0.00 3.51
572 574 1.227380 GCGCCTCCATCGATTGAGT 60.227 57.895 21.33 0.00 0.00 3.41
573 575 2.305853 CGCGCCTCCATCGATTGAG 61.306 63.158 17.46 17.46 0.00 3.02
574 576 2.279451 CGCGCCTCCATCGATTGA 60.279 61.111 0.00 0.00 0.00 2.57
575 577 4.005472 GCGCGCCTCCATCGATTG 62.005 66.667 23.24 0.00 0.00 2.67
593 595 4.873129 TTCAGCCGCCGATCGCTC 62.873 66.667 10.32 2.36 36.73 5.03
596 598 2.622903 TTAGGTTCAGCCGCCGATCG 62.623 60.000 8.51 8.51 43.70 3.69
597 599 0.249911 ATTAGGTTCAGCCGCCGATC 60.250 55.000 0.00 0.00 43.70 3.69
598 600 0.249911 GATTAGGTTCAGCCGCCGAT 60.250 55.000 0.00 0.00 43.70 4.18
599 601 1.143183 GATTAGGTTCAGCCGCCGA 59.857 57.895 0.00 0.00 43.70 5.54
600 602 2.237751 CGATTAGGTTCAGCCGCCG 61.238 63.158 0.00 0.00 43.70 6.46
601 603 0.743345 AACGATTAGGTTCAGCCGCC 60.743 55.000 0.00 0.00 43.70 6.13
602 604 1.084289 AAACGATTAGGTTCAGCCGC 58.916 50.000 0.00 0.00 43.70 6.53
603 605 2.606272 GGTAAACGATTAGGTTCAGCCG 59.394 50.000 0.00 0.00 43.70 5.52
604 606 3.602483 TGGTAAACGATTAGGTTCAGCC 58.398 45.455 0.00 0.00 37.58 4.85
605 607 8.597662 TTATATGGTAAACGATTAGGTTCAGC 57.402 34.615 0.00 0.00 0.00 4.26
616 618 9.131416 CGCTAATGTACATTATATGGTAAACGA 57.869 33.333 24.81 4.12 33.29 3.85
617 619 7.896274 GCGCTAATGTACATTATATGGTAAACG 59.104 37.037 24.81 17.31 33.29 3.60
618 620 8.714179 TGCGCTAATGTACATTATATGGTAAAC 58.286 33.333 24.81 10.31 33.29 2.01
619 621 8.714179 GTGCGCTAATGTACATTATATGGTAAA 58.286 33.333 24.81 5.43 33.29 2.01
620 622 7.062488 CGTGCGCTAATGTACATTATATGGTAA 59.938 37.037 24.81 6.09 33.29 2.85
621 623 6.528774 CGTGCGCTAATGTACATTATATGGTA 59.471 38.462 24.81 12.93 33.29 3.25
622 624 5.347635 CGTGCGCTAATGTACATTATATGGT 59.652 40.000 24.81 4.17 33.29 3.55
623 625 5.723951 GCGTGCGCTAATGTACATTATATGG 60.724 44.000 24.81 15.78 38.26 2.74
624 626 5.248087 GCGTGCGCTAATGTACATTATATG 58.752 41.667 24.81 18.37 38.26 1.78
625 627 4.031314 CGCGTGCGCTAATGTACATTATAT 59.969 41.667 24.81 5.93 39.32 0.86
626 628 3.362534 CGCGTGCGCTAATGTACATTATA 59.637 43.478 24.81 9.44 39.32 0.98
627 629 2.154963 CGCGTGCGCTAATGTACATTAT 59.845 45.455 24.81 7.00 39.32 1.28
628 630 1.519343 CGCGTGCGCTAATGTACATTA 59.481 47.619 23.51 23.51 39.32 1.90
629 631 0.300491 CGCGTGCGCTAATGTACATT 59.700 50.000 23.80 23.80 39.32 2.71
630 632 0.526739 TCGCGTGCGCTAATGTACAT 60.527 50.000 9.73 1.41 39.59 2.29
631 633 1.137459 CTCGCGTGCGCTAATGTACA 61.137 55.000 9.73 0.00 39.59 2.90
632 634 1.553654 CTCGCGTGCGCTAATGTAC 59.446 57.895 9.73 0.00 39.59 2.90
633 635 1.587876 CCTCGCGTGCGCTAATGTA 60.588 57.895 9.73 0.00 39.59 2.29
634 636 2.629050 ATCCTCGCGTGCGCTAATGT 62.629 55.000 9.73 0.00 39.59 2.71
635 637 0.663269 TATCCTCGCGTGCGCTAATG 60.663 55.000 9.73 0.00 39.59 1.90
636 638 0.243907 ATATCCTCGCGTGCGCTAAT 59.756 50.000 9.73 5.01 39.59 1.73
637 639 0.663269 CATATCCTCGCGTGCGCTAA 60.663 55.000 9.73 2.04 39.59 3.09
638 640 1.081442 CATATCCTCGCGTGCGCTA 60.081 57.895 9.73 2.73 39.59 4.26
639 641 2.355126 CATATCCTCGCGTGCGCT 60.355 61.111 9.73 0.00 39.59 5.92
640 642 4.064491 GCATATCCTCGCGTGCGC 62.064 66.667 9.79 0.00 39.59 6.09
641 643 1.560004 AATGCATATCCTCGCGTGCG 61.560 55.000 5.77 8.14 40.34 5.34
642 644 1.428448 TAATGCATATCCTCGCGTGC 58.572 50.000 5.77 8.24 38.05 5.34
643 645 3.679502 TGATTAATGCATATCCTCGCGTG 59.320 43.478 5.77 2.75 0.00 5.34
644 646 3.925379 TGATTAATGCATATCCTCGCGT 58.075 40.909 5.77 0.00 0.00 6.01
645 647 4.389992 ACTTGATTAATGCATATCCTCGCG 59.610 41.667 0.00 0.00 0.00 5.87
646 648 5.869753 ACTTGATTAATGCATATCCTCGC 57.130 39.130 0.00 0.00 0.00 5.03
647 649 7.425577 TCAACTTGATTAATGCATATCCTCG 57.574 36.000 0.00 0.00 0.00 4.63
648 650 8.844244 AGTTCAACTTGATTAATGCATATCCTC 58.156 33.333 0.00 0.00 0.00 3.71
649 651 8.757982 AGTTCAACTTGATTAATGCATATCCT 57.242 30.769 0.00 0.00 0.00 3.24
650 652 9.884465 GTAGTTCAACTTGATTAATGCATATCC 57.116 33.333 0.00 0.00 0.00 2.59
651 653 9.884465 GGTAGTTCAACTTGATTAATGCATATC 57.116 33.333 0.00 0.35 0.00 1.63
652 654 9.632638 AGGTAGTTCAACTTGATTAATGCATAT 57.367 29.630 0.00 0.00 0.00 1.78
654 656 7.944729 AGGTAGTTCAACTTGATTAATGCAT 57.055 32.000 0.00 0.00 0.00 3.96
666 668 9.869667 AGTCACAGATATATAGGTAGTTCAACT 57.130 33.333 0.00 0.00 0.00 3.16
667 669 9.900710 CAGTCACAGATATATAGGTAGTTCAAC 57.099 37.037 0.00 0.00 0.00 3.18
668 670 9.642343 ACAGTCACAGATATATAGGTAGTTCAA 57.358 33.333 0.00 0.00 0.00 2.69
669 671 9.286170 GACAGTCACAGATATATAGGTAGTTCA 57.714 37.037 0.00 0.00 0.00 3.18
670 672 9.509956 AGACAGTCACAGATATATAGGTAGTTC 57.490 37.037 2.66 0.00 0.00 3.01
671 673 9.290988 CAGACAGTCACAGATATATAGGTAGTT 57.709 37.037 2.66 0.00 0.00 2.24
672 674 7.885922 CCAGACAGTCACAGATATATAGGTAGT 59.114 40.741 2.66 0.00 0.00 2.73
673 675 7.148154 GCCAGACAGTCACAGATATATAGGTAG 60.148 44.444 2.66 0.00 0.00 3.18
674 676 6.659668 GCCAGACAGTCACAGATATATAGGTA 59.340 42.308 2.66 0.00 0.00 3.08
675 677 5.478679 GCCAGACAGTCACAGATATATAGGT 59.521 44.000 2.66 0.00 0.00 3.08
676 678 5.105554 GGCCAGACAGTCACAGATATATAGG 60.106 48.000 2.66 0.00 0.00 2.57
677 679 5.392487 CGGCCAGACAGTCACAGATATATAG 60.392 48.000 2.24 0.00 0.00 1.31
678 680 4.459337 CGGCCAGACAGTCACAGATATATA 59.541 45.833 2.24 0.00 0.00 0.86
679 681 3.256879 CGGCCAGACAGTCACAGATATAT 59.743 47.826 2.24 0.00 0.00 0.86
680 682 2.623416 CGGCCAGACAGTCACAGATATA 59.377 50.000 2.24 0.00 0.00 0.86
681 683 1.410517 CGGCCAGACAGTCACAGATAT 59.589 52.381 2.24 0.00 0.00 1.63
682 684 0.817654 CGGCCAGACAGTCACAGATA 59.182 55.000 2.24 0.00 0.00 1.98
683 685 1.593787 CGGCCAGACAGTCACAGAT 59.406 57.895 2.24 0.00 0.00 2.90
684 686 2.574018 CCGGCCAGACAGTCACAGA 61.574 63.158 2.24 0.00 0.00 3.41
685 687 1.532604 TACCGGCCAGACAGTCACAG 61.533 60.000 0.00 0.00 0.00 3.66
686 688 1.532078 TACCGGCCAGACAGTCACA 60.532 57.895 0.00 0.00 0.00 3.58
687 689 1.080025 GTACCGGCCAGACAGTCAC 60.080 63.158 0.00 0.00 0.00 3.67
688 690 2.632544 CGTACCGGCCAGACAGTCA 61.633 63.158 0.00 0.00 0.00 3.41
689 691 2.151049 AACGTACCGGCCAGACAGTC 62.151 60.000 0.00 0.00 0.00 3.51
690 692 1.751349 AAACGTACCGGCCAGACAGT 61.751 55.000 0.00 0.00 0.00 3.55
691 693 1.005394 AAACGTACCGGCCAGACAG 60.005 57.895 0.00 0.00 0.00 3.51
692 694 1.301087 CAAACGTACCGGCCAGACA 60.301 57.895 0.00 0.00 0.00 3.41
693 695 2.674084 GCAAACGTACCGGCCAGAC 61.674 63.158 0.00 0.00 0.00 3.51
694 696 2.357760 GCAAACGTACCGGCCAGA 60.358 61.111 0.00 0.00 0.00 3.86
695 697 2.666862 TGCAAACGTACCGGCCAG 60.667 61.111 0.00 0.00 0.00 4.85
696 698 2.973600 GTGCAAACGTACCGGCCA 60.974 61.111 0.00 0.00 0.00 5.36
697 699 4.079748 CGTGCAAACGTACCGGCC 62.080 66.667 0.00 0.00 0.00 6.13
698 700 4.729798 GCGTGCAAACGTACCGGC 62.730 66.667 0.00 0.00 35.26 6.13
699 701 3.289816 CTGCGTGCAAACGTACCGG 62.290 63.158 0.00 0.00 35.26 5.28
700 702 2.170036 CTGCGTGCAAACGTACCG 59.830 61.111 0.00 0.00 35.26 4.02
701 703 2.127383 GCTGCGTGCAAACGTACC 60.127 61.111 0.00 0.00 42.31 3.34
702 704 2.496794 CGCTGCGTGCAAACGTAC 60.497 61.111 14.93 0.00 43.06 3.67
703 705 2.658918 TCGCTGCGTGCAAACGTA 60.659 55.556 22.48 0.00 43.06 3.57
704 706 4.293626 GTCGCTGCGTGCAAACGT 62.294 61.111 22.48 0.00 43.06 3.99
712 714 4.986587 TTACGTGCGTCGCTGCGT 62.987 61.111 30.66 30.66 44.19 5.24
713 715 2.542837 ATTTTACGTGCGTCGCTGCG 62.543 55.000 24.81 24.81 44.19 5.18
714 716 0.367548 TATTTTACGTGCGTCGCTGC 59.632 50.000 19.50 10.31 44.19 5.25
715 717 1.387420 TGTATTTTACGTGCGTCGCTG 59.613 47.619 19.50 13.27 44.19 5.18
716 718 1.387756 GTGTATTTTACGTGCGTCGCT 59.612 47.619 19.50 0.04 44.19 4.93
717 719 1.124658 TGTGTATTTTACGTGCGTCGC 59.875 47.619 11.10 11.10 44.19 5.19
718 720 3.121261 ACTTGTGTATTTTACGTGCGTCG 60.121 43.478 0.00 0.00 46.00 5.12
719 721 4.379374 ACTTGTGTATTTTACGTGCGTC 57.621 40.909 0.00 0.00 0.00 5.19
720 722 4.034279 ACAACTTGTGTATTTTACGTGCGT 59.966 37.500 0.00 2.05 39.29 5.24
721 723 4.520078 ACAACTTGTGTATTTTACGTGCG 58.480 39.130 0.00 0.00 39.29 5.34
732 734 6.019398 GTGCGTGCATATATACAACTTGTGTA 60.019 38.462 4.57 2.82 46.72 2.90
733 735 4.873259 TGCGTGCATATATACAACTTGTGT 59.127 37.500 4.57 0.39 44.82 3.72
734 736 5.006649 AGTGCGTGCATATATACAACTTGTG 59.993 40.000 4.57 0.00 0.00 3.33
735 737 5.006649 CAGTGCGTGCATATATACAACTTGT 59.993 40.000 0.00 0.00 0.00 3.16
736 738 5.006649 ACAGTGCGTGCATATATACAACTTG 59.993 40.000 0.00 0.00 0.00 3.16
737 739 5.116180 ACAGTGCGTGCATATATACAACTT 58.884 37.500 0.00 0.00 0.00 2.66
738 740 4.693283 ACAGTGCGTGCATATATACAACT 58.307 39.130 0.00 0.00 0.00 3.16
739 741 5.403897 AACAGTGCGTGCATATATACAAC 57.596 39.130 0.00 0.00 0.00 3.32
740 742 7.095397 GGATTAACAGTGCGTGCATATATACAA 60.095 37.037 0.00 0.00 0.00 2.41
741 743 6.367695 GGATTAACAGTGCGTGCATATATACA 59.632 38.462 0.00 0.00 0.00 2.29
742 744 6.453791 CGGATTAACAGTGCGTGCATATATAC 60.454 42.308 0.00 0.00 0.00 1.47
743 745 5.575218 CGGATTAACAGTGCGTGCATATATA 59.425 40.000 0.00 0.00 0.00 0.86
744 746 4.388773 CGGATTAACAGTGCGTGCATATAT 59.611 41.667 0.00 0.00 0.00 0.86
745 747 3.738791 CGGATTAACAGTGCGTGCATATA 59.261 43.478 0.00 0.00 0.00 0.86
746 748 2.543848 CGGATTAACAGTGCGTGCATAT 59.456 45.455 0.00 0.00 0.00 1.78
747 749 1.930503 CGGATTAACAGTGCGTGCATA 59.069 47.619 0.00 0.00 0.00 3.14
748 750 0.726827 CGGATTAACAGTGCGTGCAT 59.273 50.000 0.00 0.00 0.00 3.96
749 751 0.601576 ACGGATTAACAGTGCGTGCA 60.602 50.000 0.00 0.00 42.06 4.57
750 752 2.159181 ACGGATTAACAGTGCGTGC 58.841 52.632 0.00 0.00 42.06 5.34
752 754 2.157834 TTCACGGATTAACAGTGCGT 57.842 45.000 0.00 0.00 44.49 5.24
753 755 2.930040 AGATTCACGGATTAACAGTGCG 59.070 45.455 0.00 0.00 42.68 5.34
754 756 3.485877 GCAGATTCACGGATTAACAGTGC 60.486 47.826 0.00 0.00 42.68 4.40
755 757 3.063997 GGCAGATTCACGGATTAACAGTG 59.936 47.826 0.00 0.00 43.92 3.66
756 758 3.055094 AGGCAGATTCACGGATTAACAGT 60.055 43.478 0.00 0.00 0.00 3.55
757 759 3.535561 AGGCAGATTCACGGATTAACAG 58.464 45.455 0.00 0.00 0.00 3.16
758 760 3.627395 AGGCAGATTCACGGATTAACA 57.373 42.857 0.00 0.00 0.00 2.41
759 761 4.694339 AGTAGGCAGATTCACGGATTAAC 58.306 43.478 0.00 0.00 0.00 2.01
760 762 4.649674 AGAGTAGGCAGATTCACGGATTAA 59.350 41.667 0.00 0.00 0.00 1.40
761 763 4.215908 AGAGTAGGCAGATTCACGGATTA 58.784 43.478 0.00 0.00 0.00 1.75
762 764 3.034635 AGAGTAGGCAGATTCACGGATT 58.965 45.455 0.00 0.00 0.00 3.01
763 765 2.672098 AGAGTAGGCAGATTCACGGAT 58.328 47.619 0.00 0.00 0.00 4.18
764 766 2.145397 AGAGTAGGCAGATTCACGGA 57.855 50.000 0.00 0.00 0.00 4.69
765 767 2.544685 CAAGAGTAGGCAGATTCACGG 58.455 52.381 0.00 0.00 0.00 4.94
766 768 2.544685 CCAAGAGTAGGCAGATTCACG 58.455 52.381 0.00 0.00 0.00 4.35
776 778 2.168728 GACCAAGTAGGCCAAGAGTAGG 59.831 54.545 5.01 0.00 43.14 3.18
777 779 2.168728 GGACCAAGTAGGCCAAGAGTAG 59.831 54.545 5.01 0.00 43.14 2.57
778 780 2.185387 GGACCAAGTAGGCCAAGAGTA 58.815 52.381 5.01 0.00 43.14 2.59
779 781 0.984995 GGACCAAGTAGGCCAAGAGT 59.015 55.000 5.01 0.00 43.14 3.24
780 782 1.065854 CAGGACCAAGTAGGCCAAGAG 60.066 57.143 5.01 0.00 43.14 2.85
781 783 0.984230 CAGGACCAAGTAGGCCAAGA 59.016 55.000 5.01 0.00 43.14 3.02
782 784 0.693049 ACAGGACCAAGTAGGCCAAG 59.307 55.000 5.01 0.00 43.14 3.61
783 785 2.032965 TACAGGACCAAGTAGGCCAA 57.967 50.000 5.01 0.00 43.14 4.52
784 786 2.032965 TTACAGGACCAAGTAGGCCA 57.967 50.000 5.01 0.00 43.14 5.36
785 787 2.158798 GGATTACAGGACCAAGTAGGCC 60.159 54.545 0.00 0.00 43.14 5.19
786 788 2.772515 AGGATTACAGGACCAAGTAGGC 59.227 50.000 0.00 0.00 43.14 3.93
787 789 4.770795 CAAGGATTACAGGACCAAGTAGG 58.229 47.826 0.00 0.00 45.67 3.18
788 790 4.192317 GCAAGGATTACAGGACCAAGTAG 58.808 47.826 0.00 0.00 0.00 2.57
789 791 3.054655 GGCAAGGATTACAGGACCAAGTA 60.055 47.826 0.00 0.00 0.00 2.24
790 792 2.290960 GGCAAGGATTACAGGACCAAGT 60.291 50.000 0.00 0.00 0.00 3.16
791 793 2.025887 AGGCAAGGATTACAGGACCAAG 60.026 50.000 0.00 0.00 0.00 3.61
792 794 1.992557 AGGCAAGGATTACAGGACCAA 59.007 47.619 0.00 0.00 0.00 3.67
793 795 1.668826 AGGCAAGGATTACAGGACCA 58.331 50.000 0.00 0.00 0.00 4.02
794 796 2.369394 CAAGGCAAGGATTACAGGACC 58.631 52.381 0.00 0.00 0.00 4.46
795 797 1.745653 GCAAGGCAAGGATTACAGGAC 59.254 52.381 0.00 0.00 0.00 3.85
796 798 1.340991 GGCAAGGCAAGGATTACAGGA 60.341 52.381 0.00 0.00 0.00 3.86
797 799 1.106285 GGCAAGGCAAGGATTACAGG 58.894 55.000 0.00 0.00 0.00 4.00
798 800 2.134789 AGGCAAGGCAAGGATTACAG 57.865 50.000 0.00 0.00 0.00 2.74
799 801 2.576191 ACTAGGCAAGGCAAGGATTACA 59.424 45.455 0.00 0.00 0.00 2.41
800 802 3.283259 ACTAGGCAAGGCAAGGATTAC 57.717 47.619 0.00 0.00 0.00 1.89
801 803 3.523564 AGAACTAGGCAAGGCAAGGATTA 59.476 43.478 0.00 0.00 0.00 1.75
802 804 2.310052 AGAACTAGGCAAGGCAAGGATT 59.690 45.455 0.00 0.00 0.00 3.01
803 805 1.918957 AGAACTAGGCAAGGCAAGGAT 59.081 47.619 0.00 0.00 0.00 3.24
804 806 1.003580 CAGAACTAGGCAAGGCAAGGA 59.996 52.381 0.00 0.00 0.00 3.36
805 807 1.457346 CAGAACTAGGCAAGGCAAGG 58.543 55.000 0.00 0.00 0.00 3.61
806 808 1.271597 ACCAGAACTAGGCAAGGCAAG 60.272 52.381 0.00 0.00 0.00 4.01
807 809 0.771127 ACCAGAACTAGGCAAGGCAA 59.229 50.000 0.00 0.00 0.00 4.52
808 810 0.324943 GACCAGAACTAGGCAAGGCA 59.675 55.000 0.00 0.00 0.00 4.75
809 811 0.393132 GGACCAGAACTAGGCAAGGC 60.393 60.000 0.00 0.00 0.00 4.35
810 812 0.984230 TGGACCAGAACTAGGCAAGG 59.016 55.000 0.00 0.00 0.00 3.61
811 813 2.739932 CGATGGACCAGAACTAGGCAAG 60.740 54.545 0.00 0.00 0.00 4.01
812 814 1.207089 CGATGGACCAGAACTAGGCAA 59.793 52.381 0.00 0.00 0.00 4.52
813 815 0.824109 CGATGGACCAGAACTAGGCA 59.176 55.000 0.00 0.00 0.00 4.75
814 816 0.105039 CCGATGGACCAGAACTAGGC 59.895 60.000 0.00 0.00 0.00 3.93
815 817 1.486211 ACCGATGGACCAGAACTAGG 58.514 55.000 0.00 0.00 0.00 3.02
816 818 3.056107 TCAAACCGATGGACCAGAACTAG 60.056 47.826 0.00 0.00 0.00 2.57
817 819 2.901192 TCAAACCGATGGACCAGAACTA 59.099 45.455 0.00 0.00 0.00 2.24
818 820 1.697432 TCAAACCGATGGACCAGAACT 59.303 47.619 0.00 0.00 0.00 3.01
819 821 2.178912 TCAAACCGATGGACCAGAAC 57.821 50.000 0.00 0.00 0.00 3.01
820 822 2.571653 AGATCAAACCGATGGACCAGAA 59.428 45.455 0.00 0.00 33.17 3.02
821 823 2.168521 GAGATCAAACCGATGGACCAGA 59.831 50.000 0.00 0.00 33.17 3.86
822 824 2.555199 GAGATCAAACCGATGGACCAG 58.445 52.381 0.00 0.00 33.17 4.00
823 825 1.209504 GGAGATCAAACCGATGGACCA 59.790 52.381 0.00 0.00 33.17 4.02
824 826 1.486726 AGGAGATCAAACCGATGGACC 59.513 52.381 0.00 0.00 33.17 4.46
825 827 2.799917 CGAGGAGATCAAACCGATGGAC 60.800 54.545 0.00 0.00 33.17 4.02
826 828 1.409064 CGAGGAGATCAAACCGATGGA 59.591 52.381 0.00 0.00 33.17 3.41
827 829 1.137086 ACGAGGAGATCAAACCGATGG 59.863 52.381 0.00 0.00 33.17 3.51
828 830 2.196749 CACGAGGAGATCAAACCGATG 58.803 52.381 0.00 0.00 33.17 3.84
829 831 1.137086 CCACGAGGAGATCAAACCGAT 59.863 52.381 0.00 0.00 36.89 4.18
830 832 0.530744 CCACGAGGAGATCAAACCGA 59.469 55.000 0.00 0.00 36.89 4.69
831 833 1.084370 GCCACGAGGAGATCAAACCG 61.084 60.000 1.86 0.00 36.89 4.44
832 834 0.250513 AGCCACGAGGAGATCAAACC 59.749 55.000 1.86 0.00 36.89 3.27
833 835 1.363744 CAGCCACGAGGAGATCAAAC 58.636 55.000 1.86 0.00 36.89 2.93
834 836 0.391661 GCAGCCACGAGGAGATCAAA 60.392 55.000 1.86 0.00 36.89 2.69
835 837 1.219124 GCAGCCACGAGGAGATCAA 59.781 57.895 1.86 0.00 36.89 2.57
836 838 2.725312 GGCAGCCACGAGGAGATCA 61.725 63.158 6.55 0.00 36.89 2.92
837 839 2.107953 GGCAGCCACGAGGAGATC 59.892 66.667 6.55 0.00 36.89 2.75
838 840 2.364842 AGGCAGCCACGAGGAGAT 60.365 61.111 15.80 0.00 36.89 2.75
839 841 3.071206 GAGGCAGCCACGAGGAGA 61.071 66.667 15.80 0.00 36.89 3.71
840 842 3.073735 AGAGGCAGCCACGAGGAG 61.074 66.667 15.80 0.00 36.89 3.69
841 843 3.385384 CAGAGGCAGCCACGAGGA 61.385 66.667 15.80 0.00 36.89 3.71
864 866 5.761234 GGGATATATAGACTGTAGCCGAGAG 59.239 48.000 0.00 0.00 28.28 3.20
865 867 5.429109 AGGGATATATAGACTGTAGCCGAGA 59.571 44.000 0.00 0.00 28.28 4.04
866 868 5.686753 AGGGATATATAGACTGTAGCCGAG 58.313 45.833 0.00 0.00 28.28 4.63
867 869 5.682659 GAGGGATATATAGACTGTAGCCGA 58.317 45.833 0.00 0.00 28.28 5.54
868 870 4.512198 CGAGGGATATATAGACTGTAGCCG 59.488 50.000 0.00 0.00 28.28 5.52
869 871 4.822896 CCGAGGGATATATAGACTGTAGCC 59.177 50.000 0.00 0.00 0.00 3.93
870 872 4.276431 GCCGAGGGATATATAGACTGTAGC 59.724 50.000 0.00 0.00 0.00 3.58
871 873 5.686753 AGCCGAGGGATATATAGACTGTAG 58.313 45.833 0.00 0.00 0.00 2.74
872 874 5.682659 GAGCCGAGGGATATATAGACTGTA 58.317 45.833 0.00 0.00 0.00 2.74
873 875 4.528920 GAGCCGAGGGATATATAGACTGT 58.471 47.826 0.00 0.00 0.00 3.55
874 876 3.562141 CGAGCCGAGGGATATATAGACTG 59.438 52.174 0.00 0.00 0.00 3.51
875 877 3.433882 CCGAGCCGAGGGATATATAGACT 60.434 52.174 0.00 0.00 0.00 3.24
876 878 2.879646 CCGAGCCGAGGGATATATAGAC 59.120 54.545 0.00 0.00 0.00 2.59
877 879 2.508716 ACCGAGCCGAGGGATATATAGA 59.491 50.000 0.00 0.00 0.00 1.98
878 880 2.933573 ACCGAGCCGAGGGATATATAG 58.066 52.381 0.00 0.00 0.00 1.31
879 881 3.742327 CGTACCGAGCCGAGGGATATATA 60.742 52.174 0.00 0.00 0.00 0.86
880 882 2.652590 GTACCGAGCCGAGGGATATAT 58.347 52.381 0.00 0.00 0.00 0.86
881 883 1.676916 CGTACCGAGCCGAGGGATATA 60.677 57.143 0.00 0.00 0.00 0.86
882 884 0.959372 CGTACCGAGCCGAGGGATAT 60.959 60.000 0.00 0.00 0.00 1.63
883 885 1.598962 CGTACCGAGCCGAGGGATA 60.599 63.158 0.00 0.00 0.00 2.59
884 886 2.693896 ATCGTACCGAGCCGAGGGAT 62.694 60.000 0.00 0.00 39.91 3.85
885 887 3.411114 ATCGTACCGAGCCGAGGGA 62.411 63.158 0.00 0.00 39.91 4.20
886 888 2.905880 ATCGTACCGAGCCGAGGG 60.906 66.667 0.00 0.00 39.91 4.30
887 889 2.331805 CATCGTACCGAGCCGAGG 59.668 66.667 0.00 0.00 39.91 4.63
888 890 2.331805 CCATCGTACCGAGCCGAG 59.668 66.667 0.00 0.00 39.91 4.63
889 891 3.214123 CCCATCGTACCGAGCCGA 61.214 66.667 0.00 0.00 39.91 5.54
890 892 3.195591 CTCCCATCGTACCGAGCCG 62.196 68.421 0.00 0.00 39.91 5.52
891 893 0.820891 TACTCCCATCGTACCGAGCC 60.821 60.000 0.00 0.00 39.91 4.70
892 894 0.592148 CTACTCCCATCGTACCGAGC 59.408 60.000 0.00 0.00 39.91 5.03
893 895 2.251409 TCTACTCCCATCGTACCGAG 57.749 55.000 0.00 0.00 39.91 4.63
894 896 2.715749 TTCTACTCCCATCGTACCGA 57.284 50.000 0.00 0.00 41.13 4.69
895 897 3.788333 TTTTCTACTCCCATCGTACCG 57.212 47.619 0.00 0.00 0.00 4.02
896 898 4.186926 GGTTTTTCTACTCCCATCGTACC 58.813 47.826 0.00 0.00 0.00 3.34
897 899 4.824289 TGGTTTTTCTACTCCCATCGTAC 58.176 43.478 0.00 0.00 0.00 3.67
898 900 4.773674 TCTGGTTTTTCTACTCCCATCGTA 59.226 41.667 0.00 0.00 0.00 3.43
899 901 3.581332 TCTGGTTTTTCTACTCCCATCGT 59.419 43.478 0.00 0.00 0.00 3.73
900 902 4.202245 TCTGGTTTTTCTACTCCCATCG 57.798 45.455 0.00 0.00 0.00 3.84
901 903 4.811557 CGATCTGGTTTTTCTACTCCCATC 59.188 45.833 0.00 0.00 0.00 3.51
902 904 4.469945 TCGATCTGGTTTTTCTACTCCCAT 59.530 41.667 0.00 0.00 0.00 4.00
903 905 3.835978 TCGATCTGGTTTTTCTACTCCCA 59.164 43.478 0.00 0.00 0.00 4.37
904 906 4.467198 TCGATCTGGTTTTTCTACTCCC 57.533 45.455 0.00 0.00 0.00 4.30
905 907 5.908341 AGATCGATCTGGTTTTTCTACTCC 58.092 41.667 26.78 0.00 35.42 3.85
906 908 7.262048 AGAAGATCGATCTGGTTTTTCTACTC 58.738 38.462 27.93 16.19 37.19 2.59
907 909 7.176589 AGAAGATCGATCTGGTTTTTCTACT 57.823 36.000 27.93 8.08 37.19 2.57
908 910 6.477360 GGAGAAGATCGATCTGGTTTTTCTAC 59.523 42.308 27.93 20.89 37.19 2.59
909 911 6.381420 AGGAGAAGATCGATCTGGTTTTTCTA 59.619 38.462 27.93 0.00 37.19 2.10
910 912 5.188751 AGGAGAAGATCGATCTGGTTTTTCT 59.811 40.000 27.93 23.39 37.19 2.52
911 913 5.423886 AGGAGAAGATCGATCTGGTTTTTC 58.576 41.667 27.93 19.37 37.19 2.29
912 914 5.428184 AGGAGAAGATCGATCTGGTTTTT 57.572 39.130 27.93 11.67 37.19 1.94
941 943 5.059832 CGTATCTTCTTGTGTCTTTGTCTCG 59.940 44.000 0.00 0.00 0.00 4.04
977 981 2.289072 GGTCGGTGGATCGATGATTGAT 60.289 50.000 0.54 0.00 41.40 2.57
1038 1045 0.745486 CGGATGAGGCAACATCAGCA 60.745 55.000 20.23 0.00 45.68 4.41
1086 1093 0.532573 GCAGAGATGACCACGGAGAA 59.467 55.000 0.00 0.00 0.00 2.87
1092 1099 2.447887 CGCGTGCAGAGATGACCAC 61.448 63.158 0.00 0.00 0.00 4.16
1121 1135 1.381872 ACCTGCCAGCCGACTAGAT 60.382 57.895 0.00 0.00 0.00 1.98
1254 1269 2.116125 GGCAGGAGCAACCACCTT 59.884 61.111 2.96 0.00 44.61 3.50
1266 1281 4.087892 CCGTGACCCTCAGGCAGG 62.088 72.222 0.00 0.00 43.01 4.85
1293 1308 1.164041 AACGTTTCTTGCCGTCAGGG 61.164 55.000 0.00 0.00 36.04 4.45
1294 1309 0.661020 AAACGTTTCTTGCCGTCAGG 59.339 50.000 7.96 0.00 36.04 3.86
1328 1343 1.289800 GGCACGGACGAAAACTCCTC 61.290 60.000 0.00 0.00 0.00 3.71
1364 1379 4.038042 CCGAGTCAAGGACATAGCTATTGA 59.962 45.833 2.64 2.96 34.60 2.57
1366 1381 3.961408 ACCGAGTCAAGGACATAGCTATT 59.039 43.478 2.64 0.00 34.60 1.73
1438 1456 1.463214 TGAAAGGGTGGAGGAGCCA 60.463 57.895 0.00 0.00 45.68 4.75
1536 7057 0.532862 AGGTGACACCACTGAAAGCG 60.533 55.000 26.30 0.00 41.95 4.68
1764 7286 1.983119 GATCAAGGCGGGGTGGATCA 61.983 60.000 0.00 0.00 35.57 2.92
1790 7312 4.438608 GCGGCAACAAATAAGATGACATCA 60.439 41.667 17.57 0.00 0.00 3.07
1869 7391 2.611225 AGATCTCCAAGACGCATTCC 57.389 50.000 0.00 0.00 0.00 3.01
1880 7402 4.142160 CGTGACCAATCAGTAAGATCTCCA 60.142 45.833 0.00 0.00 35.39 3.86
1888 7410 1.271379 AGCGTCGTGACCAATCAGTAA 59.729 47.619 0.00 0.00 34.75 2.24
1939 7461 5.760253 CCATGATAAGATCGGCTACTTTGTT 59.240 40.000 0.00 0.00 0.00 2.83
1986 7508 7.893124 AGTGAAAAGAGTATTACCTCCGATA 57.107 36.000 0.00 0.00 31.53 2.92
2035 7557 7.498239 CACATAAACTGAGACATCATCATCCTT 59.502 37.037 0.00 0.00 34.12 3.36
2052 7574 6.064717 GGCAATATTCTCCCTCACATAAACT 58.935 40.000 0.00 0.00 0.00 2.66
2100 7632 1.868498 CCAACGACGTACAATGGTGTT 59.132 47.619 0.00 0.00 39.30 3.32
2118 7650 4.162320 AGGAGAATTATCTTTGAGACGCCA 59.838 41.667 0.00 0.00 35.54 5.69
2129 7661 7.560626 AGGTCGTAGTACAAAGGAGAATTATCT 59.439 37.037 0.00 0.00 39.10 1.98
2156 7688 3.876309 AGGAACCTTTTGCCACTAGAA 57.124 42.857 0.00 0.00 0.00 2.10
2166 7698 3.639561 ACGGCAAATGTTAGGAACCTTTT 59.360 39.130 0.00 0.00 28.65 2.27
2181 7713 4.514585 AGCACACCCCACGGCAAA 62.515 61.111 0.00 0.00 0.00 3.68
2218 7750 4.345257 AGATATGATAAACGAGGCCACAGT 59.655 41.667 5.01 0.00 0.00 3.55
2243 7775 4.566545 GTCACCACAATGACAACAATCA 57.433 40.909 1.08 0.00 46.89 2.57
2272 7804 2.706190 ACTTAGGTGACCAACTTGCTCT 59.294 45.455 3.63 0.00 0.00 4.09
2310 7843 1.133792 ACAAATTCCATCCGGCTAGGG 60.134 52.381 0.00 0.00 41.52 3.53
2316 7849 5.414454 TCTCTGTTTTACAAATTCCATCCGG 59.586 40.000 0.00 0.00 0.00 5.14
2327 7888 9.554395 TCATCAACAACTATCTCTGTTTTACAA 57.446 29.630 0.00 0.00 33.51 2.41
2344 7905 8.877864 AAATACCCAAGTAATCTCATCAACAA 57.122 30.769 0.00 0.00 30.59 2.83
2349 7910 9.614792 AGTACAAAATACCCAAGTAATCTCATC 57.385 33.333 0.00 0.00 30.59 2.92
2421 7982 0.250124 TCCACGCGGTGTCAAAAGAT 60.250 50.000 12.47 0.00 0.00 2.40
2438 7999 0.947244 ATTCGGAATCATGCGCTTCC 59.053 50.000 14.47 14.47 40.58 3.46
2445 8006 6.127810 ACATGTCAAAGATTCGGAATCATG 57.872 37.500 27.39 23.94 40.42 3.07
2480 8041 3.071023 AGGCAGCGGTAACACACATATAT 59.929 43.478 0.00 0.00 0.00 0.86
2482 8043 1.209504 AGGCAGCGGTAACACACATAT 59.790 47.619 0.00 0.00 0.00 1.78
2490 8051 2.018542 TTGTATGAGGCAGCGGTAAC 57.981 50.000 0.00 0.00 0.00 2.50
2491 8052 3.275617 AATTGTATGAGGCAGCGGTAA 57.724 42.857 0.00 0.00 0.00 2.85
2537 8098 8.622948 AAGAAAAGTAGTGGATCTTTTACAGG 57.377 34.615 0.00 0.00 41.79 4.00
2544 8105 6.944862 AGCATGAAAGAAAAGTAGTGGATCTT 59.055 34.615 0.00 0.00 31.98 2.40
2601 8183 5.987098 TGTGTATAATTGGGTTAGCGGTAA 58.013 37.500 2.26 2.26 0.00 2.85
2606 8188 5.883673 TGGTTCTGTGTATAATTGGGTTAGC 59.116 40.000 0.00 0.00 0.00 3.09
2625 8207 7.617041 ACTAACTAGATGCTTCATTTGGTTC 57.383 36.000 0.00 0.00 33.36 3.62
2694 8279 3.247648 CGAGGGAGTATGTTTTTATGCCG 59.752 47.826 0.00 0.00 0.00 5.69
2698 8283 9.689501 TTTTTATCCGAGGGAGTATGTTTTTAT 57.310 29.630 0.00 0.00 34.05 1.40
2727 8312 5.728351 TTTTAACTTGGAGAACGACACTG 57.272 39.130 0.00 0.00 0.00 3.66
2741 8326 9.857957 TCGTGGTTTTAGTTCAAATTTTAACTT 57.142 25.926 19.85 7.46 37.19 2.66
2779 8364 4.649674 TGTAATCTACTGCTCCCTTCGATT 59.350 41.667 0.00 0.00 0.00 3.34
2784 8369 5.216622 TGGTATGTAATCTACTGCTCCCTT 58.783 41.667 0.00 0.00 0.00 3.95
2834 8419 5.587844 GGAAGAGTATGACAAAGACATGCAT 59.412 40.000 0.00 0.00 33.93 3.96
2846 8432 2.102252 CAGGGCAGAGGAAGAGTATGAC 59.898 54.545 0.00 0.00 0.00 3.06
2914 8501 1.134220 TGCGGGTCTTGTGACTTTTCT 60.134 47.619 0.00 0.00 42.54 2.52
2927 8516 0.527565 TAGGTAACGAAGTGCGGGTC 59.472 55.000 0.00 0.00 45.00 4.46
2933 8522 3.805422 TGTGTTTGCTAGGTAACGAAGTG 59.195 43.478 0.00 0.00 45.00 3.16
2940 8529 8.100791 ACTCAGAATATTGTGTTTGCTAGGTAA 58.899 33.333 11.96 0.00 0.00 2.85
2978 8567 0.809636 TAGCACCCATCAACGATGCG 60.810 55.000 0.00 0.00 41.23 4.73
2985 8574 0.618458 GACCCACTAGCACCCATCAA 59.382 55.000 0.00 0.00 0.00 2.57
2996 8585 1.451567 CTCCTCGCTCGACCCACTA 60.452 63.158 0.00 0.00 0.00 2.74
3027 8680 5.288804 ACCTTGAAAAACATCACAATTCGG 58.711 37.500 0.00 0.00 0.00 4.30
3028 8681 5.976534 TGACCTTGAAAAACATCACAATTCG 59.023 36.000 0.00 0.00 0.00 3.34
3029 8682 7.492344 ACTTGACCTTGAAAAACATCACAATTC 59.508 33.333 0.00 0.00 0.00 2.17
3040 8693 6.036577 AGAAAAGCACTTGACCTTGAAAAA 57.963 33.333 0.00 0.00 0.00 1.94
3079 8732 7.441157 GTCATACATCTGGATCGATTTTGGTTA 59.559 37.037 0.00 0.00 0.00 2.85
3095 8748 5.772169 TCTCGATCATCAAGGTCATACATCT 59.228 40.000 0.00 0.00 0.00 2.90
3103 8756 6.708054 ACCATTTTATCTCGATCATCAAGGTC 59.292 38.462 0.00 0.00 0.00 3.85
3108 8761 8.150296 ACACATACCATTTTATCTCGATCATCA 58.850 33.333 0.00 0.00 0.00 3.07
3124 8777 5.321102 ACACACCACAATAACACATACCAT 58.679 37.500 0.00 0.00 0.00 3.55
3125 8778 4.720046 ACACACCACAATAACACATACCA 58.280 39.130 0.00 0.00 0.00 3.25


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.