Multiple sequence alignment - TraesCS3B01G077100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G077100 chr3B 100.000 6545 0 0 1 6545 47469139 47462595 0.000000e+00 12087.0
1 TraesCS3B01G077100 chr3B 85.088 114 17 0 664 777 564626878 564626765 4.150000e-22 117.0
2 TraesCS3B01G077100 chr3D 91.389 3658 220 51 2310 5901 28509236 28505608 0.000000e+00 4922.0
3 TraesCS3B01G077100 chr3D 84.093 2326 240 47 3 2254 28511675 28509406 0.000000e+00 2126.0
4 TraesCS3B01G077100 chr3D 92.388 381 27 2 5898 6276 28505486 28505106 5.770000e-150 542.0
5 TraesCS3B01G077100 chr3D 92.701 274 17 3 6274 6545 273862549 273862821 6.150000e-105 392.0
6 TraesCS3B01G077100 chr3A 88.129 3538 243 85 2603 6014 38272107 38268621 0.000000e+00 4043.0
7 TraesCS3B01G077100 chr3A 93.644 708 38 4 1915 2616 38272868 38272162 0.000000e+00 1051.0
8 TraesCS3B01G077100 chr3A 88.244 672 51 13 775 1439 38274316 38273666 0.000000e+00 778.0
9 TraesCS3B01G077100 chr3A 78.689 610 94 22 3 605 38275004 38274424 2.230000e-99 374.0
10 TraesCS3B01G077100 chr3A 93.583 187 8 2 1578 1764 38273077 38272895 6.460000e-70 276.0
11 TraesCS3B01G077100 chr3A 86.957 115 15 0 657 771 697773664 697773550 5.330000e-26 130.0
12 TraesCS3B01G077100 chr3A 80.749 187 12 11 2193 2363 38273075 38272897 2.480000e-24 124.0
13 TraesCS3B01G077100 chr3A 100.000 31 0 0 773 803 589904418 589904388 2.550000e-04 58.4
14 TraesCS3B01G077100 chr7A 93.796 274 16 1 6273 6545 403935478 403935205 1.700000e-110 411.0
15 TraesCS3B01G077100 chr4D 93.382 272 18 0 6274 6545 87795965 87796236 2.840000e-108 403.0
16 TraesCS3B01G077100 chr6D 93.066 274 18 1 6273 6545 398840946 398840673 3.680000e-107 399.0
17 TraesCS3B01G077100 chr1A 93.066 274 18 1 6273 6545 488068617 488068344 3.680000e-107 399.0
18 TraesCS3B01G077100 chr2A 93.040 273 18 1 6274 6545 439398770 439399042 1.320000e-106 398.0
19 TraesCS3B01G077100 chr2A 84.483 116 18 0 658 773 100597723 100597838 1.490000e-21 115.0
20 TraesCS3B01G077100 chr7D 93.015 272 18 1 6274 6545 85937374 85937104 4.760000e-106 396.0
21 TraesCS3B01G077100 chr2B 92.674 273 19 1 6274 6545 734394557 734394285 6.150000e-105 392.0
22 TraesCS3B01G077100 chr2B 92.364 275 20 1 6272 6545 222591029 222590755 2.210000e-104 390.0
23 TraesCS3B01G077100 chr2B 95.122 41 1 1 911 950 635225142 635225102 5.480000e-06 63.9
24 TraesCS3B01G077100 chr2B 95.122 41 1 1 911 950 635225688 635225648 5.480000e-06 63.9
25 TraesCS3B01G077100 chr4A 85.124 121 18 0 656 776 584034437 584034317 2.480000e-24 124.0
26 TraesCS3B01G077100 chr5D 84.874 119 18 0 658 776 379557262 379557144 3.210000e-23 121.0
27 TraesCS3B01G077100 chr5A 83.846 130 18 3 657 785 425560184 425560057 3.210000e-23 121.0
28 TraesCS3B01G077100 chr6A 84.426 122 17 2 655 776 26531250 26531369 1.150000e-22 119.0
29 TraesCS3B01G077100 chr5B 83.200 125 20 1 657 780 34915540 34915416 5.360000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G077100 chr3B 47462595 47469139 6544 True 12087.000000 12087 100.000 1 6545 1 chr3B.!!$R1 6544
1 TraesCS3B01G077100 chr3D 28505106 28511675 6569 True 2530.000000 4922 89.290 3 6276 3 chr3D.!!$R1 6273
2 TraesCS3B01G077100 chr3A 38268621 38275004 6383 True 1107.666667 4043 87.173 3 6014 6 chr3A.!!$R3 6011

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
40 41 0.035343 TGTTGGGTTTGGTGTGTCGA 60.035 50.0 0.00 0.00 0.00 4.20 F
42 43 0.035343 TTGGGTTTGGTGTGTCGACA 60.035 50.0 15.76 15.76 0.00 4.35 F
875 897 0.041238 TAGAGTAGGTGGGCTGCAGT 59.959 55.0 16.64 0.00 0.00 4.40 F
1797 2359 0.177141 TATGGACCTGCGGTAACTGC 59.823 55.0 0.09 0.00 35.25 4.40 F
2049 2638 0.326048 AGGATAGCTCTGGTGCAGGT 60.326 55.0 0.00 0.00 34.99 4.00 F
2053 2642 0.764890 TAGCTCTGGTGCAGGTTGTT 59.235 50.0 0.00 0.00 34.99 2.83 F
3485 4294 0.903454 TGTCTTTCTCGGAGGGGGTC 60.903 60.0 4.96 0.00 0.00 4.46 F
4913 5755 0.326264 GTGGGTTGCCTGAGATCTGT 59.674 55.0 0.00 0.00 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1791 2353 0.179043 TCACAGTTTGGCGGCAGTTA 60.179 50.000 12.87 0.00 0.00 2.24 R
1795 2357 1.971167 GGATCACAGTTTGGCGGCA 60.971 57.895 7.97 7.97 0.00 5.69 R
2560 3278 0.106521 TACTGCAGCAGTGACAGCAA 59.893 50.000 34.25 12.81 45.01 3.91 R
3466 4275 0.903454 GACCCCCTCCGAGAAAGACA 60.903 60.000 0.00 0.00 0.00 3.41 R
3496 4306 1.226746 ACGCTTTTTCTCTCGGTTGG 58.773 50.000 0.00 0.00 0.00 3.77 R
3498 4308 2.285977 ACAACGCTTTTTCTCTCGGTT 58.714 42.857 0.00 0.00 0.00 4.44 R
4954 5801 1.536766 ACGTGTGCATTGTCAATGAGG 59.463 47.619 26.36 14.51 41.46 3.86 R
6354 7420 0.174389 GAGAGAGATGACGGCTTGCA 59.826 55.000 0.00 0.00 0.00 4.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 2.172717 GGCATGTAGATAGGTGTTGGGT 59.827 50.000 0.00 0.00 0.00 4.51
40 41 0.035343 TGTTGGGTTTGGTGTGTCGA 60.035 50.000 0.00 0.00 0.00 4.20
42 43 0.035343 TTGGGTTTGGTGTGTCGACA 60.035 50.000 15.76 15.76 0.00 4.35
65 66 4.028490 GCCGTGATGGTGGGGACA 62.028 66.667 0.00 0.00 41.21 4.02
66 67 2.753701 CCGTGATGGTGGGGACAA 59.246 61.111 0.00 0.00 46.06 3.18
85 86 4.114073 ACAACGTCGTGTGAAATAAGTGA 58.886 39.130 0.00 0.00 0.00 3.41
88 89 4.304110 ACGTCGTGTGAAATAAGTGATGT 58.696 39.130 0.00 0.00 0.00 3.06
91 92 5.333035 CGTCGTGTGAAATAAGTGATGTTGT 60.333 40.000 0.00 0.00 0.00 3.32
96 98 6.697019 GTGTGAAATAAGTGATGTTGTTTGCT 59.303 34.615 0.00 0.00 0.00 3.91
103 105 2.557924 GTGATGTTGTTTGCTCCCATCA 59.442 45.455 0.00 0.00 39.51 3.07
105 107 2.064434 TGTTGTTTGCTCCCATCACA 57.936 45.000 0.00 0.00 0.00 3.58
117 119 2.439880 TCCCATCACAGTGTGGTTGTTA 59.560 45.455 22.79 2.87 33.87 2.41
120 122 3.629855 CCATCACAGTGTGGTTGTTAACA 59.370 43.478 22.79 3.59 33.87 2.41
213 215 3.951563 CTTGGGGATGGATCAAGGTTA 57.048 47.619 0.00 0.00 35.53 2.85
215 217 3.662759 TGGGGATGGATCAAGGTTAAC 57.337 47.619 0.00 0.00 0.00 2.01
217 219 1.947456 GGGATGGATCAAGGTTAACGC 59.053 52.381 0.00 0.00 0.00 4.84
223 225 2.159198 GGATCAAGGTTAACGCGGTAGA 60.159 50.000 12.47 0.94 0.00 2.59
225 227 1.203052 TCAAGGTTAACGCGGTAGAGG 59.797 52.381 12.47 0.00 0.00 3.69
248 250 3.067684 TCGACCTTGAAGGGGATTTTC 57.932 47.619 16.78 1.64 40.58 2.29
254 256 2.514458 TGAAGGGGATTTTCTGCTCC 57.486 50.000 0.00 0.00 0.00 4.70
259 261 0.180406 GGGATTTTCTGCTCCGGCTA 59.820 55.000 0.00 0.00 39.59 3.93
261 263 1.406887 GGATTTTCTGCTCCGGCTACA 60.407 52.381 0.00 0.00 39.59 2.74
264 266 0.901827 TTTCTGCTCCGGCTACATCA 59.098 50.000 0.00 0.00 39.59 3.07
265 267 0.901827 TTCTGCTCCGGCTACATCAA 59.098 50.000 0.00 0.00 39.59 2.57
278 288 4.441634 GGCTACATCAATACGAGTTCTGGT 60.442 45.833 0.00 0.00 0.00 4.00
322 332 2.330216 GTATAGGAGTGATGGGCCAGT 58.670 52.381 13.78 0.00 0.00 4.00
323 333 1.135094 ATAGGAGTGATGGGCCAGTG 58.865 55.000 13.78 0.00 0.00 3.66
328 338 0.185901 AGTGATGGGCCAGTGTTGTT 59.814 50.000 13.78 0.00 0.00 2.83
335 345 1.431440 GCCAGTGTTGTTGCGTTGA 59.569 52.632 0.00 0.00 0.00 3.18
342 352 3.627577 AGTGTTGTTGCGTTGATCTCTTT 59.372 39.130 0.00 0.00 0.00 2.52
372 386 2.756907 CCAGATCTTCCTCCCTCTTGA 58.243 52.381 0.00 0.00 0.00 3.02
375 389 3.966006 CAGATCTTCCTCCCTCTTGATCA 59.034 47.826 0.00 0.00 34.50 2.92
378 392 3.102972 TCTTCCTCCCTCTTGATCACTG 58.897 50.000 0.00 0.00 0.00 3.66
393 407 3.473647 CTGGCGAGGGAGGCATCA 61.474 66.667 0.00 0.00 45.71 3.07
397 411 1.449353 GCGAGGGAGGCATCATCTT 59.551 57.895 0.00 0.00 0.00 2.40
400 414 2.648059 CGAGGGAGGCATCATCTTTTT 58.352 47.619 0.00 0.00 0.00 1.94
419 433 0.971386 TTCTGGTGGTACTTCGTCCC 59.029 55.000 0.00 0.00 0.00 4.46
421 435 1.530013 CTGGTGGTACTTCGTCCCGT 61.530 60.000 0.00 0.00 0.00 5.28
474 488 1.760613 AGGTTGACGACTTCTTGTCCA 59.239 47.619 0.00 0.00 42.49 4.02
481 495 3.195661 ACGACTTCTTGTCCACAAAGAC 58.804 45.455 0.00 0.00 42.49 3.01
484 498 2.241176 ACTTCTTGTCCACAAAGACCCA 59.759 45.455 0.00 0.00 35.83 4.51
505 519 5.392380 CCCAGTCTGCAGATTAAAATGTCAC 60.392 44.000 21.47 2.46 0.00 3.67
544 561 3.710722 CGCTCCTTCAGCCTGGGT 61.711 66.667 0.00 0.00 46.74 4.51
545 562 2.759795 GCTCCTTCAGCCTGGGTT 59.240 61.111 0.00 0.00 43.17 4.11
552 570 1.434513 TTCAGCCTGGGTTGGGATGT 61.435 55.000 0.00 0.00 40.65 3.06
642 664 8.072321 TGGCTATTAGCAATAGAAGATCTAGG 57.928 38.462 17.11 0.00 44.75 3.02
647 669 7.768807 TTAGCAATAGAAGATCTAGGGTCTC 57.231 40.000 0.00 0.00 31.67 3.36
653 675 7.833285 ATAGAAGATCTAGGGTCTCTTTCAC 57.167 40.000 0.00 0.00 31.67 3.18
657 679 6.882768 AGATCTAGGGTCTCTTTCACAAAT 57.117 37.500 0.00 0.00 0.00 2.32
661 683 7.554959 TCTAGGGTCTCTTTCACAAATACTT 57.445 36.000 0.00 0.00 0.00 2.24
666 688 6.937465 GGGTCTCTTTCACAAATACTTTCTCT 59.063 38.462 0.00 0.00 0.00 3.10
804 826 8.261628 ACATTCGTATGTAGTTCGTATTAACG 57.738 34.615 5.81 0.00 45.51 3.18
805 827 7.376866 ACATTCGTATGTAGTTCGTATTAACGG 59.623 37.037 5.81 0.00 44.87 4.44
870 892 3.983533 AGAGAATAGAGTAGGTGGGCT 57.016 47.619 0.00 0.00 0.00 5.19
871 893 3.571590 AGAGAATAGAGTAGGTGGGCTG 58.428 50.000 0.00 0.00 0.00 4.85
875 897 0.041238 TAGAGTAGGTGGGCTGCAGT 59.959 55.000 16.64 0.00 0.00 4.40
880 902 2.471084 TAGGTGGGCTGCAGTAGGGT 62.471 60.000 16.64 0.00 0.00 4.34
947 975 4.403734 TGTCAAATCCCTAGAACCCAAAC 58.596 43.478 0.00 0.00 0.00 2.93
960 988 1.173913 CCCAAACCCTCGATCCAAAC 58.826 55.000 0.00 0.00 0.00 2.93
985 1013 1.000993 AGATCCGTCCAGCAGGAGT 59.999 57.895 0.00 0.00 46.92 3.85
1109 1137 1.679311 CCCTTCAGTACCAGCAGCA 59.321 57.895 0.00 0.00 0.00 4.41
1110 1138 0.392193 CCCTTCAGTACCAGCAGCAG 60.392 60.000 0.00 0.00 0.00 4.24
1111 1139 1.023513 CCTTCAGTACCAGCAGCAGC 61.024 60.000 0.00 0.00 42.56 5.25
1112 1140 1.003355 TTCAGTACCAGCAGCAGCC 60.003 57.895 0.00 0.00 43.56 4.85
1113 1141 2.786539 TTCAGTACCAGCAGCAGCCG 62.787 60.000 0.00 0.00 43.56 5.52
1114 1142 4.767255 AGTACCAGCAGCAGCCGC 62.767 66.667 0.00 0.00 43.56 6.53
1116 1144 4.765449 TACCAGCAGCAGCCGCAG 62.765 66.667 2.79 0.00 43.56 5.18
1227 1255 2.119801 TTCTCCAGAAAGCCAGCATC 57.880 50.000 0.00 0.00 0.00 3.91
1271 1299 2.429250 TCGAGCTGATTGGGATTCGTTA 59.571 45.455 0.00 0.00 0.00 3.18
1303 1339 9.961265 GGCCATTTCTTAATGTATTAGTAAACC 57.039 33.333 0.00 0.00 39.62 3.27
1316 1352 6.850752 ATTAGTAAACCATCCACTTTTGGG 57.149 37.500 0.00 0.00 44.11 4.12
1328 1364 4.528596 TCCACTTTTGGGTTTCAGTTTCAA 59.471 37.500 0.00 0.00 44.11 2.69
1362 1398 7.559486 TGAAGATTGTATCATTACTCTGCACT 58.441 34.615 0.00 0.00 0.00 4.40
1384 1420 5.526111 ACTTGTGTACTGTGTCAAACATACC 59.474 40.000 0.00 0.00 38.39 2.73
1427 1474 9.778741 TTATTCTTGAACAGTAGCAATATAGGG 57.221 33.333 0.00 0.00 0.00 3.53
1439 1486 5.594777 AGCAATATAGGGTAGCTCTGGTAT 58.405 41.667 0.00 0.00 0.00 2.73
1447 1494 2.559231 GGTAGCTCTGGTATAGGCTGTC 59.441 54.545 0.00 0.00 35.46 3.51
1476 1523 9.051679 CCATTCTGACATAATCGTTTTGGTATA 57.948 33.333 0.00 0.00 0.00 1.47
1479 1526 8.515473 TCTGACATAATCGTTTTGGTATATCG 57.485 34.615 0.00 0.00 0.00 2.92
1480 1527 8.139350 TCTGACATAATCGTTTTGGTATATCGT 58.861 33.333 0.00 0.00 0.00 3.73
1481 1528 8.651391 TGACATAATCGTTTTGGTATATCGTT 57.349 30.769 0.00 0.00 0.00 3.85
1482 1529 8.757789 TGACATAATCGTTTTGGTATATCGTTC 58.242 33.333 0.00 0.00 0.00 3.95
1483 1530 8.882415 ACATAATCGTTTTGGTATATCGTTCT 57.118 30.769 0.00 0.00 0.00 3.01
1491 1538 8.437742 CGTTTTGGTATATCGTTCTTAACACTT 58.562 33.333 0.00 0.00 0.00 3.16
1494 1541 9.926158 TTTGGTATATCGTTCTTAACACTTACA 57.074 29.630 0.00 0.00 0.00 2.41
1495 1542 8.915871 TGGTATATCGTTCTTAACACTTACAC 57.084 34.615 0.00 0.00 0.00 2.90
1496 1543 8.522003 TGGTATATCGTTCTTAACACTTACACA 58.478 33.333 0.00 0.00 0.00 3.72
1497 1544 9.017669 GGTATATCGTTCTTAACACTTACACAG 57.982 37.037 0.00 0.00 0.00 3.66
1498 1545 9.778993 GTATATCGTTCTTAACACTTACACAGA 57.221 33.333 0.00 0.00 0.00 3.41
1502 1549 5.333111 CGTTCTTAACACTTACACAGAAGGC 60.333 44.000 0.00 0.00 0.00 4.35
1524 1577 5.177511 GGCTGTTTTTGTTCCTTTTATCTGC 59.822 40.000 0.00 0.00 0.00 4.26
1526 1579 6.424812 GCTGTTTTTGTTCCTTTTATCTGCAT 59.575 34.615 0.00 0.00 0.00 3.96
1571 1632 3.831323 TCGATTCATGGCATGGGTTTAT 58.169 40.909 26.15 12.32 0.00 1.40
1610 2172 1.310904 GTTGTACGGAAAGCCAACCA 58.689 50.000 0.00 0.00 32.91 3.67
1782 2344 5.703978 TTGTTTGTCTGAACACCATATGG 57.296 39.130 20.68 20.68 39.11 2.74
1791 2353 1.271840 ACACCATATGGACCTGCGGT 61.272 55.000 28.77 10.68 39.44 5.68
1795 2357 1.416401 CCATATGGACCTGCGGTAACT 59.584 52.381 17.49 0.00 35.25 2.24
1796 2358 2.483876 CATATGGACCTGCGGTAACTG 58.516 52.381 0.00 0.00 35.25 3.16
1797 2359 0.177141 TATGGACCTGCGGTAACTGC 59.823 55.000 0.09 0.00 35.25 4.40
1798 2360 2.436115 GGACCTGCGGTAACTGCC 60.436 66.667 0.09 0.00 35.25 4.85
1814 2376 2.700773 GCCGCCAAACTGTGATCCC 61.701 63.158 0.00 0.00 0.00 3.85
1821 2383 0.893727 AAACTGTGATCCCGGTTGCC 60.894 55.000 2.95 0.00 34.23 4.52
1828 2390 1.048601 GATCCCGGTTGCCTGATCTA 58.951 55.000 0.00 0.00 31.32 1.98
1834 2396 2.355756 CCGGTTGCCTGATCTAATTGTG 59.644 50.000 0.00 0.00 0.00 3.33
1836 2398 2.689983 GGTTGCCTGATCTAATTGTGGG 59.310 50.000 0.00 0.00 0.00 4.61
1838 2400 3.737559 TGCCTGATCTAATTGTGGGTT 57.262 42.857 0.00 0.00 0.00 4.11
1848 2410 2.134789 ATTGTGGGTTGCCTGAGATC 57.865 50.000 0.00 0.00 0.00 2.75
1850 2412 0.615331 TGTGGGTTGCCTGAGATCTC 59.385 55.000 16.21 16.21 0.00 2.75
1855 2417 2.948315 GGGTTGCCTGAGATCTCATTTC 59.052 50.000 25.30 16.60 39.13 2.17
1857 2419 3.371380 GGTTGCCTGAGATCTCATTTCCT 60.371 47.826 25.30 0.00 39.13 3.36
1859 2421 4.952071 TGCCTGAGATCTCATTTCCTAG 57.048 45.455 25.30 11.81 39.13 3.02
1878 2440 7.733773 TCCTAGACACTCATTCTGGAAAATA 57.266 36.000 0.00 0.00 0.00 1.40
1885 2447 8.103948 ACACTCATTCTGGAAAATAGTGAAAG 57.896 34.615 19.85 5.86 37.04 2.62
1992 2577 5.945784 AGATGTGTATTGTGCCAAACATACT 59.054 36.000 4.65 0.00 38.99 2.12
2044 2633 9.469097 AATAGTAGTAATAGGATAGCTCTGGTG 57.531 37.037 0.00 0.00 0.00 4.17
2049 2638 0.326048 AGGATAGCTCTGGTGCAGGT 60.326 55.000 0.00 0.00 34.99 4.00
2053 2642 0.764890 TAGCTCTGGTGCAGGTTGTT 59.235 50.000 0.00 0.00 34.99 2.83
2097 2686 8.060090 CGTTTTGGTATATCATTCTTAACGGTC 58.940 37.037 0.00 0.00 33.22 4.79
2364 3080 2.639839 AGTACCCACTGCAGATGTTTCT 59.360 45.455 23.35 12.10 32.25 2.52
2385 3102 3.701205 TTGTCTGCACACATATGGACT 57.299 42.857 7.80 0.00 29.76 3.85
2410 3127 1.042559 CAACCCCTGCCAAACTGTGT 61.043 55.000 0.00 0.00 0.00 3.72
2452 3169 1.323271 TGGGTCGCCTGAGATCTCAC 61.323 60.000 21.67 11.92 35.46 3.51
2484 3201 3.077359 CTCACTCTGGGAAATGGTGAAC 58.923 50.000 0.00 0.00 36.65 3.18
2519 3237 8.844441 TTATTGACAAAAGAAACCAACTTACG 57.156 30.769 0.00 0.00 0.00 3.18
2532 3250 2.299297 CAACTTACGGACAAGGAGGAGT 59.701 50.000 0.00 0.00 0.00 3.85
2536 3254 2.660064 CGGACAAGGAGGAGTGGGG 61.660 68.421 0.00 0.00 0.00 4.96
2544 3262 4.677151 AGGAGTGGGGTGGGGGAC 62.677 72.222 0.00 0.00 0.00 4.46
2560 3278 1.066358 GGGACGCTTACTACTTGGCTT 60.066 52.381 0.00 0.00 0.00 4.35
2624 3410 4.380843 TGGTTTATGTGTCACCATTCCT 57.619 40.909 0.00 0.00 35.57 3.36
2737 3524 1.188863 AGGCAGATTTGTGATTGGCC 58.811 50.000 0.00 0.00 40.18 5.36
2754 3541 2.114670 CCAACCATAGGTGCTGGCG 61.115 63.158 0.00 0.00 37.27 5.69
2789 3576 8.962679 GTAGAGGGACTATGTTGAAGGATATAG 58.037 40.741 0.00 0.00 41.55 1.31
2796 3583 5.894298 ATGTTGAAGGATATAGCAGTGGA 57.106 39.130 0.00 0.00 0.00 4.02
2855 3642 2.758130 ACCAGGGGAACACAATTTTGT 58.242 42.857 0.00 0.00 43.36 2.83
2858 3645 3.258123 CCAGGGGAACACAATTTTGTAGG 59.742 47.826 0.00 0.00 39.91 3.18
2917 3704 5.695851 AGAACTTTGTTAAGCTGGTGATG 57.304 39.130 0.00 0.00 34.60 3.07
2924 3711 5.627499 TGTTAAGCTGGTGATGACATTTC 57.373 39.130 0.00 0.00 0.00 2.17
2963 3750 5.559770 TGTAGTTGCATCAAGAAATGAGGA 58.440 37.500 0.00 0.00 42.41 3.71
2994 3781 3.463533 TGCAATATCGTTTCACAACCG 57.536 42.857 0.00 0.00 0.00 4.44
3012 3804 5.297527 ACAACCGAGGTTTTTAATCGTTTCT 59.702 36.000 4.52 0.00 36.00 2.52
3013 3805 5.352643 ACCGAGGTTTTTAATCGTTTCTG 57.647 39.130 0.00 0.00 34.71 3.02
3036 3828 1.902432 TTTTTAACCGGGGGCCACG 60.902 57.895 24.21 24.21 0.00 4.94
3067 3859 3.699025 ATTCCCCCAAAATACCGGAAT 57.301 42.857 9.46 0.00 38.27 3.01
3068 3860 2.740506 TCCCCCAAAATACCGGAATC 57.259 50.000 9.46 0.00 0.00 2.52
3069 3861 2.210644 TCCCCCAAAATACCGGAATCT 58.789 47.619 9.46 0.00 0.00 2.40
3071 3863 2.693074 CCCCCAAAATACCGGAATCTTG 59.307 50.000 9.46 6.29 0.00 3.02
3073 3865 3.361786 CCCAAAATACCGGAATCTTGGT 58.638 45.455 9.46 3.50 42.34 3.67
3074 3866 3.130340 CCCAAAATACCGGAATCTTGGTG 59.870 47.826 9.46 6.38 39.30 4.17
3075 3867 3.761752 CCAAAATACCGGAATCTTGGTGT 59.238 43.478 9.46 0.00 39.30 4.16
3077 3869 5.416326 CCAAAATACCGGAATCTTGGTGTTA 59.584 40.000 9.46 0.00 38.45 2.41
3078 3870 6.071840 CCAAAATACCGGAATCTTGGTGTTAA 60.072 38.462 9.46 0.00 38.45 2.01
3079 3871 6.505044 AAATACCGGAATCTTGGTGTTAAC 57.495 37.500 9.46 0.00 38.45 2.01
3084 3878 3.421844 GGAATCTTGGTGTTAACAGCCT 58.578 45.455 29.46 12.75 43.22 4.58
3222 4022 1.197949 CGAGCTCTTGAGTTCGAGTCA 59.802 52.381 25.19 0.00 35.19 3.41
3224 4024 3.434637 GAGCTCTTGAGTTCGAGTCATC 58.565 50.000 6.43 0.00 0.00 2.92
3225 4025 2.165437 AGCTCTTGAGTTCGAGTCATCC 59.835 50.000 0.79 0.00 0.00 3.51
3258 4058 5.669164 TCACTTTTACCTTGTTTTGCCTT 57.331 34.783 0.00 0.00 0.00 4.35
3312 4112 2.224523 ACTCGGTGAAAAATCAGAGGCA 60.225 45.455 0.00 0.00 32.01 4.75
3350 4150 4.293648 CACCACAGACACCCGCGA 62.294 66.667 8.23 0.00 0.00 5.87
3351 4151 3.991051 ACCACAGACACCCGCGAG 61.991 66.667 8.23 0.00 0.00 5.03
3357 4157 2.742372 GACACCCGCGAGTTGCAT 60.742 61.111 8.23 0.00 46.97 3.96
3411 4211 6.824196 TGTTTACGTCAATATTGGCATCCTTA 59.176 34.615 19.53 0.00 31.86 2.69
3432 4232 9.103582 TCCTTAGTAGTACTGGTTCCATTTTTA 57.896 33.333 13.29 0.00 0.00 1.52
3466 4275 5.134661 TCCAAAATTTTCCAGACGGTAACT 58.865 37.500 0.00 0.00 0.00 2.24
3469 4278 5.684550 AAATTTTCCAGACGGTAACTGTC 57.315 39.130 0.00 0.00 39.40 3.51
3485 4294 0.903454 TGTCTTTCTCGGAGGGGGTC 60.903 60.000 4.96 0.00 0.00 4.46
3513 4323 3.710326 AAACCAACCGAGAGAAAAAGC 57.290 42.857 0.00 0.00 0.00 3.51
3514 4324 1.226746 ACCAACCGAGAGAAAAAGCG 58.773 50.000 0.00 0.00 0.00 4.68
3753 4585 6.672266 AATGGTAGTATGGTAGATGACTGG 57.328 41.667 0.00 0.00 0.00 4.00
3764 4596 4.098196 GGTAGATGACTGGTTCTGGTCTAC 59.902 50.000 0.00 0.00 35.68 2.59
3767 4599 1.884579 TGACTGGTTCTGGTCTACGAC 59.115 52.381 0.00 0.00 34.01 4.34
3885 4720 6.927294 ATCTGTGCCAAGCTAATAAACTAC 57.073 37.500 0.00 0.00 0.00 2.73
3906 4741 8.354011 ACTACACTATCTTCGTATTGAATTGC 57.646 34.615 0.00 0.00 35.63 3.56
3932 4767 6.144563 GCTTTTGTAGAATTTTGAAGCCTGAC 59.855 38.462 0.00 0.00 33.73 3.51
3954 4789 6.268387 TGACATATGATTACTCAGAGCATGGA 59.732 38.462 10.38 0.00 34.12 3.41
4028 4863 0.968405 GTCAATTTGCCAGGAGCCAA 59.032 50.000 0.00 0.00 42.71 4.52
4095 4930 8.500753 TGTTGTAAGTTTCTACACATGACTTT 57.499 30.769 0.00 0.00 31.52 2.66
4096 4931 8.394877 TGTTGTAAGTTTCTACACATGACTTTG 58.605 33.333 0.00 0.00 31.52 2.77
4200 5038 6.493458 AGGTGGCATGTTACTTTTGTCTAATT 59.507 34.615 0.00 0.00 0.00 1.40
4237 5075 1.134580 CAGGGGTCACATGCTAGACAG 60.135 57.143 13.44 0.00 36.50 3.51
4292 5130 3.448934 TGAATATTGTGGGGCCATTTGT 58.551 40.909 4.39 0.00 0.00 2.83
4321 5160 5.606348 ACCAAAATGCACCAAAAGTTCTA 57.394 34.783 0.00 0.00 0.00 2.10
4337 5176 7.640597 AAAGTTCTAAAAGTGTTAAGCCTGT 57.359 32.000 0.00 0.00 0.00 4.00
4493 5333 3.208747 TCAAGTTTGGAACTCCCTCAC 57.791 47.619 0.00 0.00 41.91 3.51
4539 5379 3.330701 AGTTGGGCACAGGATTTAAGAGA 59.669 43.478 0.00 0.00 0.00 3.10
4575 5415 6.002082 TGATATTGGCCATCTCTTTCTCATG 58.998 40.000 6.09 0.00 0.00 3.07
4598 5438 3.947834 CCAAGGGCATTAAGTTACCTCTG 59.052 47.826 0.00 0.00 0.00 3.35
4695 5535 3.421844 GAAGGGCAAAGTAGGAACACAT 58.578 45.455 0.00 0.00 0.00 3.21
4881 5723 9.646427 TTTTGTTTTCTTCGAAATATAATGGGG 57.354 29.630 0.00 0.00 0.00 4.96
4883 5725 6.183360 TGTTTTCTTCGAAATATAATGGGGCC 60.183 38.462 0.00 0.00 0.00 5.80
4888 5730 7.054124 TCTTCGAAATATAATGGGGCCATATC 58.946 38.462 4.39 0.00 35.31 1.63
4889 5731 6.575244 TCGAAATATAATGGGGCCATATCT 57.425 37.500 4.39 0.00 35.31 1.98
4896 5738 9.425248 AATATAATGGGGCCATATCTAATTGTG 57.575 33.333 4.39 0.00 35.31 3.33
4897 5739 3.524095 TGGGGCCATATCTAATTGTGG 57.476 47.619 4.39 0.00 34.84 4.17
4901 5743 3.573967 GGGCCATATCTAATTGTGGGTTG 59.426 47.826 4.39 0.00 32.35 3.77
4902 5744 3.005791 GGCCATATCTAATTGTGGGTTGC 59.994 47.826 0.00 0.00 32.35 4.17
4904 5746 4.473444 CCATATCTAATTGTGGGTTGCCT 58.527 43.478 0.00 0.00 0.00 4.75
4905 5747 4.279169 CCATATCTAATTGTGGGTTGCCTG 59.721 45.833 0.00 0.00 0.00 4.85
4906 5748 3.737559 ATCTAATTGTGGGTTGCCTGA 57.262 42.857 0.00 0.00 0.00 3.86
4907 5749 3.071874 TCTAATTGTGGGTTGCCTGAG 57.928 47.619 0.00 0.00 0.00 3.35
4908 5750 2.642311 TCTAATTGTGGGTTGCCTGAGA 59.358 45.455 0.00 0.00 0.00 3.27
4909 5751 2.610438 AATTGTGGGTTGCCTGAGAT 57.390 45.000 0.00 0.00 0.00 2.75
4910 5752 2.134789 ATTGTGGGTTGCCTGAGATC 57.865 50.000 0.00 0.00 0.00 2.75
4911 5753 1.067295 TTGTGGGTTGCCTGAGATCT 58.933 50.000 0.00 0.00 0.00 2.75
4913 5755 0.326264 GTGGGTTGCCTGAGATCTGT 59.674 55.000 0.00 0.00 0.00 3.41
4918 5765 4.660303 TGGGTTGCCTGAGATCTGTAATAT 59.340 41.667 0.00 0.00 0.00 1.28
4930 5777 8.041919 TGAGATCTGTAATATCTACGGAGGTAG 58.958 40.741 0.00 0.00 46.16 3.18
4968 5816 1.737838 TCGACCCTCATTGACAATGC 58.262 50.000 21.17 7.76 38.77 3.56
5053 5901 8.547967 TTTCTACATAACTTCTTGCCTTGTAG 57.452 34.615 0.00 0.00 37.48 2.74
5107 5955 5.811399 TTGGCTGGTTTATCTTTGTATCG 57.189 39.130 0.00 0.00 0.00 2.92
5245 6094 1.905215 CTCACCAGTGAATCCTGACCT 59.095 52.381 1.58 0.00 39.39 3.85
5409 6282 6.372659 TGATCAAAGAAAGTAAGTGCTCCATC 59.627 38.462 0.00 0.00 0.00 3.51
5419 6292 1.815003 TGCTCCATCCATCAACGCG 60.815 57.895 3.53 3.53 0.00 6.01
5422 6295 1.153449 TCCATCCATCAACGCGACC 60.153 57.895 15.93 0.00 0.00 4.79
5443 6316 5.192176 ACCTGCCAACAATTTTTGTGATTT 58.808 33.333 3.78 0.00 44.59 2.17
5444 6317 5.066246 ACCTGCCAACAATTTTTGTGATTTG 59.934 36.000 3.78 0.00 44.59 2.32
5547 6420 5.283876 AGGGGGATCCAACAAGATAAAAA 57.716 39.130 15.23 0.00 38.24 1.94
5600 6476 6.767902 ACATTAATTATGATGGAGCTCGTTGT 59.232 34.615 7.83 0.00 37.69 3.32
5610 6486 3.403057 CTCGTTGTCACCACCGCG 61.403 66.667 0.00 0.00 0.00 6.46
5635 6518 5.975344 TGAAATAAATCGACGCGTCTTATCT 59.025 36.000 33.94 19.07 0.00 1.98
5668 6551 4.618693 GCTTGGAGTAGTCTGTGGAGTAAC 60.619 50.000 0.00 0.00 0.00 2.50
5705 6588 0.040425 GTGGTGGTTACAAAGCTGCG 60.040 55.000 0.00 0.00 0.00 5.18
5717 6600 0.808125 AAGCTGCGTTTGTGTGTTGA 59.192 45.000 0.00 0.00 0.00 3.18
5750 6633 9.573133 GTATTTTGAGTTTTATGAAGTCATGGG 57.427 33.333 4.00 0.00 37.15 4.00
5751 6634 7.831691 TTTTGAGTTTTATGAAGTCATGGGA 57.168 32.000 4.00 0.00 37.15 4.37
5753 6636 6.126863 TGAGTTTTATGAAGTCATGGGAGT 57.873 37.500 4.00 0.00 37.15 3.85
5754 6637 6.173339 TGAGTTTTATGAAGTCATGGGAGTC 58.827 40.000 4.00 3.27 37.15 3.36
5755 6638 5.501156 AGTTTTATGAAGTCATGGGAGTCC 58.499 41.667 0.00 0.00 37.15 3.85
5756 6639 4.503714 TTTATGAAGTCATGGGAGTCCC 57.496 45.455 22.54 22.54 45.71 4.46
5757 6640 2.277008 ATGAAGTCATGGGAGTCCCT 57.723 50.000 28.73 11.84 45.70 4.20
5878 6804 4.662278 CAATAATGTGATAATCCGGGGGT 58.338 43.478 0.00 0.00 0.00 4.95
5932 6983 9.844790 TTTTATTCAGACAAGTTTGATGCTATG 57.155 29.630 0.00 0.00 0.00 2.23
5993 7057 1.475930 GCAACTCTAGCAGATTCCCCC 60.476 57.143 0.00 0.00 0.00 5.40
6067 7132 4.803098 AGAACAACTAGCGGAGTACAAT 57.197 40.909 0.00 0.00 37.44 2.71
6122 7188 4.228210 AGCCTTCATATTTGGAGTTCTGGA 59.772 41.667 0.00 0.00 0.00 3.86
6128 7194 6.595682 TCATATTTGGAGTTCTGGAGGATTC 58.404 40.000 0.00 0.00 0.00 2.52
6155 7221 5.254339 CTGAATGAAATTTCAGCCCCTAC 57.746 43.478 24.17 11.29 44.30 3.18
6156 7222 4.023291 TGAATGAAATTTCAGCCCCTACC 58.977 43.478 24.17 8.76 41.08 3.18
6160 7226 1.858739 AATTTCAGCCCCTACCGCCA 61.859 55.000 0.00 0.00 0.00 5.69
6162 7228 2.478335 TTTCAGCCCCTACCGCCAAG 62.478 60.000 0.00 0.00 0.00 3.61
6171 7237 1.298859 CTACCGCCAAGCTCCAACAC 61.299 60.000 0.00 0.00 0.00 3.32
6175 7241 1.885871 GCCAAGCTCCAACACCATC 59.114 57.895 0.00 0.00 0.00 3.51
6192 7258 1.094785 ATCGTGTTACATGCAAGGCC 58.905 50.000 0.00 0.00 0.00 5.19
6222 7288 1.669115 TGCGCTCCAGAAGACAAGC 60.669 57.895 9.73 0.00 0.00 4.01
6271 7337 7.619965 ACCAAAATTTAGGGGTCATGTATTTG 58.380 34.615 12.09 0.00 0.00 2.32
6276 7342 9.936329 AAATTTAGGGGTCATGTATTTGATACT 57.064 29.630 0.00 0.00 36.70 2.12
6277 7343 9.574516 AATTTAGGGGTCATGTATTTGATACTC 57.425 33.333 0.00 0.00 36.70 2.59
6278 7344 5.568620 AGGGGTCATGTATTTGATACTCC 57.431 43.478 0.00 0.00 36.70 3.85
6279 7345 4.351111 AGGGGTCATGTATTTGATACTCCC 59.649 45.833 0.00 0.00 36.70 4.30
6280 7346 4.351111 GGGGTCATGTATTTGATACTCCCT 59.649 45.833 0.00 0.00 36.70 4.20
6281 7347 5.513267 GGGGTCATGTATTTGATACTCCCTC 60.513 48.000 0.00 0.00 36.70 4.30
6282 7348 5.513267 GGGTCATGTATTTGATACTCCCTCC 60.513 48.000 0.00 0.00 36.70 4.30
6283 7349 5.230942 GTCATGTATTTGATACTCCCTCCG 58.769 45.833 0.00 0.00 36.70 4.63
6284 7350 4.899457 TCATGTATTTGATACTCCCTCCGT 59.101 41.667 0.00 0.00 36.70 4.69
6285 7351 4.931661 TGTATTTGATACTCCCTCCGTC 57.068 45.455 0.43 0.00 36.70 4.79
6286 7352 3.640029 TGTATTTGATACTCCCTCCGTCC 59.360 47.826 0.43 0.00 36.70 4.79
6287 7353 1.108776 TTTGATACTCCCTCCGTCCG 58.891 55.000 0.00 0.00 0.00 4.79
6288 7354 0.754217 TTGATACTCCCTCCGTCCGG 60.754 60.000 0.00 0.00 0.00 5.14
6289 7355 1.152798 GATACTCCCTCCGTCCGGT 60.153 63.158 0.00 0.00 36.47 5.28
6290 7356 1.453762 GATACTCCCTCCGTCCGGTG 61.454 65.000 0.00 3.10 36.47 4.94
6291 7357 1.929860 ATACTCCCTCCGTCCGGTGA 61.930 60.000 0.00 0.00 36.47 4.02
6292 7358 2.141011 TACTCCCTCCGTCCGGTGAA 62.141 60.000 0.00 0.00 36.47 3.18
6293 7359 2.203669 TCCCTCCGTCCGGTGAAA 60.204 61.111 0.00 0.00 36.47 2.69
6294 7360 1.823169 CTCCCTCCGTCCGGTGAAAA 61.823 60.000 0.00 0.00 36.47 2.29
6295 7361 1.375523 CCCTCCGTCCGGTGAAAAG 60.376 63.158 0.00 0.00 36.47 2.27
6296 7362 1.370064 CCTCCGTCCGGTGAAAAGT 59.630 57.895 0.00 0.00 36.47 2.66
6297 7363 0.949105 CCTCCGTCCGGTGAAAAGTG 60.949 60.000 0.00 0.00 36.47 3.16
6298 7364 0.249741 CTCCGTCCGGTGAAAAGTGT 60.250 55.000 0.00 0.00 36.47 3.55
6299 7365 1.000060 CTCCGTCCGGTGAAAAGTGTA 60.000 52.381 0.00 0.00 36.47 2.90
6300 7366 1.142474 CCGTCCGGTGAAAAGTGTAC 58.858 55.000 0.00 0.00 0.00 2.90
6301 7367 1.538634 CCGTCCGGTGAAAAGTGTACA 60.539 52.381 0.00 0.00 0.00 2.90
6302 7368 2.409975 CGTCCGGTGAAAAGTGTACAT 58.590 47.619 0.00 0.00 0.00 2.29
6303 7369 2.410730 CGTCCGGTGAAAAGTGTACATC 59.589 50.000 0.00 0.00 0.00 3.06
6304 7370 3.660865 GTCCGGTGAAAAGTGTACATCT 58.339 45.455 0.00 0.00 0.00 2.90
6305 7371 4.616604 CGTCCGGTGAAAAGTGTACATCTA 60.617 45.833 0.00 0.00 0.00 1.98
6306 7372 4.863131 GTCCGGTGAAAAGTGTACATCTAG 59.137 45.833 0.00 0.00 0.00 2.43
6307 7373 4.768448 TCCGGTGAAAAGTGTACATCTAGA 59.232 41.667 0.00 0.00 0.00 2.43
6308 7374 5.244402 TCCGGTGAAAAGTGTACATCTAGAA 59.756 40.000 0.00 0.00 0.00 2.10
6309 7375 5.929992 CCGGTGAAAAGTGTACATCTAGAAA 59.070 40.000 0.00 0.00 0.00 2.52
6310 7376 6.594159 CCGGTGAAAAGTGTACATCTAGAAAT 59.406 38.462 0.00 0.00 0.00 2.17
6311 7377 7.119262 CCGGTGAAAAGTGTACATCTAGAAATT 59.881 37.037 0.00 0.00 0.00 1.82
6312 7378 8.504005 CGGTGAAAAGTGTACATCTAGAAATTT 58.496 33.333 0.00 0.00 0.00 1.82
6319 7385 9.778741 AAGTGTACATCTAGAAATTTTCAGACA 57.221 29.630 11.53 4.97 0.00 3.41
6320 7386 9.778741 AGTGTACATCTAGAAATTTTCAGACAA 57.221 29.630 11.53 0.80 0.00 3.18
6331 7397 9.933723 AGAAATTTTCAGACAAATTATGAAGGG 57.066 29.630 11.53 0.00 35.67 3.95
6332 7398 9.154847 GAAATTTTCAGACAAATTATGAAGGGG 57.845 33.333 4.25 0.00 35.67 4.79
6333 7399 8.434589 AATTTTCAGACAAATTATGAAGGGGA 57.565 30.769 0.00 0.00 35.09 4.81
6334 7400 7.466746 TTTTCAGACAAATTATGAAGGGGAG 57.533 36.000 0.00 0.00 34.64 4.30
6335 7401 5.779241 TCAGACAAATTATGAAGGGGAGT 57.221 39.130 0.00 0.00 0.00 3.85
6336 7402 6.884472 TCAGACAAATTATGAAGGGGAGTA 57.116 37.500 0.00 0.00 0.00 2.59
6337 7403 7.265599 TCAGACAAATTATGAAGGGGAGTAA 57.734 36.000 0.00 0.00 0.00 2.24
6338 7404 7.695055 TCAGACAAATTATGAAGGGGAGTAAA 58.305 34.615 0.00 0.00 0.00 2.01
6339 7405 8.167392 TCAGACAAATTATGAAGGGGAGTAAAA 58.833 33.333 0.00 0.00 0.00 1.52
6340 7406 8.802267 CAGACAAATTATGAAGGGGAGTAAAAA 58.198 33.333 0.00 0.00 0.00 1.94
6341 7407 9.547279 AGACAAATTATGAAGGGGAGTAAAAAT 57.453 29.630 0.00 0.00 0.00 1.82
6342 7408 9.586435 GACAAATTATGAAGGGGAGTAAAAATG 57.414 33.333 0.00 0.00 0.00 2.32
6343 7409 8.040727 ACAAATTATGAAGGGGAGTAAAAATGC 58.959 33.333 0.00 0.00 0.00 3.56
6344 7410 7.732222 AATTATGAAGGGGAGTAAAAATGCA 57.268 32.000 0.00 0.00 0.00 3.96
6345 7411 7.919385 ATTATGAAGGGGAGTAAAAATGCAT 57.081 32.000 0.00 0.00 0.00 3.96
6346 7412 7.732222 TTATGAAGGGGAGTAAAAATGCATT 57.268 32.000 5.99 5.99 0.00 3.56
6347 7413 5.404466 TGAAGGGGAGTAAAAATGCATTG 57.596 39.130 13.82 0.00 0.00 2.82
6348 7414 5.083122 TGAAGGGGAGTAAAAATGCATTGA 58.917 37.500 13.82 0.00 0.00 2.57
6349 7415 5.185635 TGAAGGGGAGTAAAAATGCATTGAG 59.814 40.000 13.82 0.00 0.00 3.02
6350 7416 4.934356 AGGGGAGTAAAAATGCATTGAGA 58.066 39.130 13.82 0.00 0.00 3.27
6351 7417 5.332743 AGGGGAGTAAAAATGCATTGAGAA 58.667 37.500 13.82 0.00 0.00 2.87
6352 7418 5.420104 AGGGGAGTAAAAATGCATTGAGAAG 59.580 40.000 13.82 0.00 0.00 2.85
6353 7419 5.418840 GGGGAGTAAAAATGCATTGAGAAGA 59.581 40.000 13.82 0.00 0.00 2.87
6354 7420 6.097412 GGGGAGTAAAAATGCATTGAGAAGAT 59.903 38.462 13.82 0.00 0.00 2.40
6355 7421 6.976925 GGGAGTAAAAATGCATTGAGAAGATG 59.023 38.462 13.82 0.00 0.00 2.90
6361 7427 2.205307 GCATTGAGAAGATGCAAGCC 57.795 50.000 0.00 0.00 46.96 4.35
6362 7428 1.533338 GCATTGAGAAGATGCAAGCCG 60.533 52.381 0.00 0.00 46.96 5.52
6363 7429 1.741706 CATTGAGAAGATGCAAGCCGT 59.258 47.619 0.00 0.00 0.00 5.68
6364 7430 1.442769 TTGAGAAGATGCAAGCCGTC 58.557 50.000 0.00 0.00 0.00 4.79
6365 7431 0.321346 TGAGAAGATGCAAGCCGTCA 59.679 50.000 0.00 0.00 31.60 4.35
6366 7432 1.065926 TGAGAAGATGCAAGCCGTCAT 60.066 47.619 0.00 0.00 31.60 3.06
6367 7433 1.596727 GAGAAGATGCAAGCCGTCATC 59.403 52.381 0.00 2.51 39.38 2.92
6369 7435 1.596727 GAAGATGCAAGCCGTCATCTC 59.403 52.381 11.16 4.18 46.11 2.75
6370 7436 0.829333 AGATGCAAGCCGTCATCTCT 59.171 50.000 0.00 0.00 44.23 3.10
6371 7437 1.202510 AGATGCAAGCCGTCATCTCTC 60.203 52.381 0.00 0.00 44.23 3.20
6372 7438 0.829333 ATGCAAGCCGTCATCTCTCT 59.171 50.000 0.00 0.00 0.00 3.10
6373 7439 0.174389 TGCAAGCCGTCATCTCTCTC 59.826 55.000 0.00 0.00 0.00 3.20
6374 7440 0.529555 GCAAGCCGTCATCTCTCTCC 60.530 60.000 0.00 0.00 0.00 3.71
6375 7441 1.110442 CAAGCCGTCATCTCTCTCCT 58.890 55.000 0.00 0.00 0.00 3.69
6376 7442 1.066908 CAAGCCGTCATCTCTCTCCTC 59.933 57.143 0.00 0.00 0.00 3.71
6377 7443 0.550914 AGCCGTCATCTCTCTCCTCT 59.449 55.000 0.00 0.00 0.00 3.69
6378 7444 1.064017 AGCCGTCATCTCTCTCCTCTT 60.064 52.381 0.00 0.00 0.00 2.85
6379 7445 1.754226 GCCGTCATCTCTCTCCTCTTT 59.246 52.381 0.00 0.00 0.00 2.52
6380 7446 2.952978 GCCGTCATCTCTCTCCTCTTTA 59.047 50.000 0.00 0.00 0.00 1.85
6381 7447 3.004315 GCCGTCATCTCTCTCCTCTTTAG 59.996 52.174 0.00 0.00 0.00 1.85
6382 7448 4.204012 CCGTCATCTCTCTCCTCTTTAGT 58.796 47.826 0.00 0.00 0.00 2.24
6383 7449 4.642885 CCGTCATCTCTCTCCTCTTTAGTT 59.357 45.833 0.00 0.00 0.00 2.24
6384 7450 5.823570 CCGTCATCTCTCTCCTCTTTAGTTA 59.176 44.000 0.00 0.00 0.00 2.24
6385 7451 6.238538 CCGTCATCTCTCTCCTCTTTAGTTAC 60.239 46.154 0.00 0.00 0.00 2.50
6386 7452 6.238538 CGTCATCTCTCTCCTCTTTAGTTACC 60.239 46.154 0.00 0.00 0.00 2.85
6387 7453 6.040054 GTCATCTCTCTCCTCTTTAGTTACCC 59.960 46.154 0.00 0.00 0.00 3.69
6388 7454 5.531753 TCTCTCTCCTCTTTAGTTACCCA 57.468 43.478 0.00 0.00 0.00 4.51
6389 7455 5.900437 TCTCTCTCCTCTTTAGTTACCCAA 58.100 41.667 0.00 0.00 0.00 4.12
6390 7456 5.715753 TCTCTCTCCTCTTTAGTTACCCAAC 59.284 44.000 0.00 0.00 34.67 3.77
6391 7457 4.776308 TCTCTCCTCTTTAGTTACCCAACC 59.224 45.833 0.00 0.00 35.05 3.77
6392 7458 3.842436 TCTCCTCTTTAGTTACCCAACCC 59.158 47.826 0.00 0.00 35.05 4.11
6393 7459 2.914941 TCCTCTTTAGTTACCCAACCCC 59.085 50.000 0.00 0.00 35.05 4.95
6394 7460 2.917600 CCTCTTTAGTTACCCAACCCCT 59.082 50.000 0.00 0.00 35.05 4.79
6395 7461 4.106324 CCTCTTTAGTTACCCAACCCCTA 58.894 47.826 0.00 0.00 35.05 3.53
6396 7462 4.537288 CCTCTTTAGTTACCCAACCCCTAA 59.463 45.833 0.00 0.00 35.05 2.69
6397 7463 5.193124 CCTCTTTAGTTACCCAACCCCTAAT 59.807 44.000 0.00 0.00 35.05 1.73
6398 7464 6.069705 TCTTTAGTTACCCAACCCCTAATG 57.930 41.667 0.00 0.00 35.05 1.90
6399 7465 5.791664 TCTTTAGTTACCCAACCCCTAATGA 59.208 40.000 0.00 0.00 35.05 2.57
6400 7466 5.703730 TTAGTTACCCAACCCCTAATGAG 57.296 43.478 0.00 0.00 35.05 2.90
6401 7467 2.241430 AGTTACCCAACCCCTAATGAGC 59.759 50.000 0.00 0.00 35.05 4.26
6402 7468 2.241430 GTTACCCAACCCCTAATGAGCT 59.759 50.000 0.00 0.00 0.00 4.09
6403 7469 2.280308 ACCCAACCCCTAATGAGCTA 57.720 50.000 0.00 0.00 0.00 3.32
6404 7470 2.568979 ACCCAACCCCTAATGAGCTAA 58.431 47.619 0.00 0.00 0.00 3.09
6405 7471 2.509964 ACCCAACCCCTAATGAGCTAAG 59.490 50.000 0.00 0.00 0.00 2.18
6406 7472 2.509964 CCCAACCCCTAATGAGCTAAGT 59.490 50.000 0.00 0.00 0.00 2.24
6407 7473 3.545703 CCAACCCCTAATGAGCTAAGTG 58.454 50.000 0.00 0.00 0.00 3.16
6408 7474 2.945668 CAACCCCTAATGAGCTAAGTGC 59.054 50.000 0.00 0.00 43.29 4.40
6409 7475 2.196595 ACCCCTAATGAGCTAAGTGCA 58.803 47.619 0.00 0.00 45.94 4.57
6410 7476 2.780010 ACCCCTAATGAGCTAAGTGCAT 59.220 45.455 0.00 0.00 45.94 3.96
6411 7477 3.144506 CCCCTAATGAGCTAAGTGCATG 58.855 50.000 0.00 0.00 45.94 4.06
6412 7478 3.434167 CCCCTAATGAGCTAAGTGCATGT 60.434 47.826 0.00 0.00 45.94 3.21
6413 7479 4.202357 CCCCTAATGAGCTAAGTGCATGTA 60.202 45.833 0.00 0.00 45.94 2.29
6414 7480 4.993584 CCCTAATGAGCTAAGTGCATGTAG 59.006 45.833 0.00 0.00 45.94 2.74
6415 7481 5.221521 CCCTAATGAGCTAAGTGCATGTAGA 60.222 44.000 10.04 0.00 45.94 2.59
6416 7482 6.283694 CCTAATGAGCTAAGTGCATGTAGAA 58.716 40.000 10.04 0.00 45.94 2.10
6417 7483 6.763135 CCTAATGAGCTAAGTGCATGTAGAAA 59.237 38.462 10.04 0.00 45.94 2.52
6418 7484 7.443575 CCTAATGAGCTAAGTGCATGTAGAAAT 59.556 37.037 10.04 0.00 45.94 2.17
6419 7485 7.636150 AATGAGCTAAGTGCATGTAGAAATT 57.364 32.000 10.04 4.39 45.94 1.82
6420 7486 8.737168 AATGAGCTAAGTGCATGTAGAAATTA 57.263 30.769 10.04 0.00 45.94 1.40
6421 7487 8.737168 ATGAGCTAAGTGCATGTAGAAATTAA 57.263 30.769 10.04 0.00 45.94 1.40
6422 7488 8.201554 TGAGCTAAGTGCATGTAGAAATTAAG 57.798 34.615 10.04 0.00 45.94 1.85
6423 7489 8.040727 TGAGCTAAGTGCATGTAGAAATTAAGA 58.959 33.333 10.04 0.00 45.94 2.10
6424 7490 8.792830 AGCTAAGTGCATGTAGAAATTAAGAA 57.207 30.769 10.04 0.00 45.94 2.52
6425 7491 8.887717 AGCTAAGTGCATGTAGAAATTAAGAAG 58.112 33.333 10.04 0.00 45.94 2.85
6426 7492 8.883731 GCTAAGTGCATGTAGAAATTAAGAAGA 58.116 33.333 10.04 0.00 42.31 2.87
6428 7494 8.854614 AAGTGCATGTAGAAATTAAGAAGAGT 57.145 30.769 0.00 0.00 0.00 3.24
6429 7495 9.944376 AAGTGCATGTAGAAATTAAGAAGAGTA 57.056 29.630 0.00 0.00 0.00 2.59
6432 7498 9.890629 TGCATGTAGAAATTAAGAAGAGTATGT 57.109 29.630 0.00 0.00 0.00 2.29
6450 7516 9.540538 AGAGTATGTATAGAATGCTATTGGTCT 57.459 33.333 0.00 0.00 38.30 3.85
6452 7518 9.935241 AGTATGTATAGAATGCTATTGGTCTTG 57.065 33.333 0.00 0.00 38.30 3.02
6453 7519 9.929180 GTATGTATAGAATGCTATTGGTCTTGA 57.071 33.333 0.00 0.00 38.30 3.02
6458 7524 8.854614 ATAGAATGCTATTGGTCTTGATTACC 57.145 34.615 0.00 0.00 33.54 2.85
6459 7525 5.760253 AGAATGCTATTGGTCTTGATTACCG 59.240 40.000 0.00 0.00 40.08 4.02
6460 7526 4.481368 TGCTATTGGTCTTGATTACCGT 57.519 40.909 0.00 0.00 40.08 4.83
6461 7527 4.188462 TGCTATTGGTCTTGATTACCGTG 58.812 43.478 0.00 0.00 40.08 4.94
6462 7528 4.189231 GCTATTGGTCTTGATTACCGTGT 58.811 43.478 0.00 0.00 40.08 4.49
6463 7529 4.034048 GCTATTGGTCTTGATTACCGTGTG 59.966 45.833 0.00 0.00 40.08 3.82
6464 7530 3.755112 TTGGTCTTGATTACCGTGTGA 57.245 42.857 0.00 0.00 40.08 3.58
6465 7531 3.973206 TGGTCTTGATTACCGTGTGAT 57.027 42.857 0.00 0.00 40.08 3.06
6466 7532 3.595173 TGGTCTTGATTACCGTGTGATG 58.405 45.455 0.00 0.00 40.08 3.07
6467 7533 3.259625 TGGTCTTGATTACCGTGTGATGA 59.740 43.478 0.00 0.00 40.08 2.92
6468 7534 3.865745 GGTCTTGATTACCGTGTGATGAG 59.134 47.826 0.00 0.00 0.00 2.90
6469 7535 4.381612 GGTCTTGATTACCGTGTGATGAGA 60.382 45.833 0.00 0.00 0.00 3.27
6470 7536 4.800993 GTCTTGATTACCGTGTGATGAGAG 59.199 45.833 0.00 0.00 0.00 3.20
6471 7537 4.705023 TCTTGATTACCGTGTGATGAGAGA 59.295 41.667 0.00 0.00 0.00 3.10
6472 7538 5.185056 TCTTGATTACCGTGTGATGAGAGAA 59.815 40.000 0.00 0.00 0.00 2.87
6473 7539 5.400066 TGATTACCGTGTGATGAGAGAAA 57.600 39.130 0.00 0.00 0.00 2.52
6474 7540 5.789521 TGATTACCGTGTGATGAGAGAAAA 58.210 37.500 0.00 0.00 0.00 2.29
6475 7541 6.406370 TGATTACCGTGTGATGAGAGAAAAT 58.594 36.000 0.00 0.00 0.00 1.82
6476 7542 7.552459 TGATTACCGTGTGATGAGAGAAAATA 58.448 34.615 0.00 0.00 0.00 1.40
6477 7543 7.491372 TGATTACCGTGTGATGAGAGAAAATAC 59.509 37.037 0.00 0.00 0.00 1.89
6478 7544 5.407407 ACCGTGTGATGAGAGAAAATACT 57.593 39.130 0.00 0.00 0.00 2.12
6479 7545 5.794894 ACCGTGTGATGAGAGAAAATACTT 58.205 37.500 0.00 0.00 0.00 2.24
6480 7546 6.231211 ACCGTGTGATGAGAGAAAATACTTT 58.769 36.000 0.00 0.00 0.00 2.66
6481 7547 7.383687 ACCGTGTGATGAGAGAAAATACTTTA 58.616 34.615 0.00 0.00 0.00 1.85
6482 7548 7.876068 ACCGTGTGATGAGAGAAAATACTTTAA 59.124 33.333 0.00 0.00 0.00 1.52
6483 7549 8.717821 CCGTGTGATGAGAGAAAATACTTTAAA 58.282 33.333 0.00 0.00 0.00 1.52
6484 7550 9.746711 CGTGTGATGAGAGAAAATACTTTAAAG 57.253 33.333 13.76 13.76 0.00 1.85
6487 7553 9.548208 GTGATGAGAGAAAATACTTTAAAGTGC 57.452 33.333 27.40 12.96 40.07 4.40
6488 7554 9.283768 TGATGAGAGAAAATACTTTAAAGTGCA 57.716 29.630 27.40 11.71 40.07 4.57
6502 7568 9.959721 ACTTTAAAGTGCATTAGGAAGATAGAA 57.040 29.630 19.94 0.00 37.98 2.10
6504 7570 9.959721 TTTAAAGTGCATTAGGAAGATAGAAGT 57.040 29.630 0.00 0.00 0.00 3.01
6509 7575 9.594936 AGTGCATTAGGAAGATAGAAGTATACT 57.405 33.333 0.00 0.00 0.00 2.12
6534 7600 7.996098 TTTTTGTGGACAAATTTTAAACCCA 57.004 28.000 5.80 0.00 44.30 4.51
6535 7601 7.996098 TTTTGTGGACAAATTTTAAACCCAA 57.004 28.000 5.80 0.00 44.30 4.12
6536 7602 7.996098 TTTGTGGACAAATTTTAAACCCAAA 57.004 28.000 0.70 0.00 40.55 3.28
6537 7603 6.986904 TGTGGACAAATTTTAAACCCAAAC 57.013 33.333 0.00 0.00 0.00 2.93
6538 7604 6.472887 TGTGGACAAATTTTAAACCCAAACA 58.527 32.000 0.00 0.00 0.00 2.83
6539 7605 7.112779 TGTGGACAAATTTTAAACCCAAACAT 58.887 30.769 0.00 0.00 0.00 2.71
6540 7606 8.265055 TGTGGACAAATTTTAAACCCAAACATA 58.735 29.630 0.00 0.00 0.00 2.29
6541 7607 8.552865 GTGGACAAATTTTAAACCCAAACATAC 58.447 33.333 0.00 0.00 0.00 2.39
6542 7608 8.265055 TGGACAAATTTTAAACCCAAACATACA 58.735 29.630 0.00 0.00 0.00 2.29
6543 7609 8.552865 GGACAAATTTTAAACCCAAACATACAC 58.447 33.333 0.00 0.00 0.00 2.90
6544 7610 9.320352 GACAAATTTTAAACCCAAACATACACT 57.680 29.630 0.00 0.00 0.00 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.255242 CCAACACCTATCTACATGCCAAAATAG 60.255 40.741 0.00 0.00 0.00 1.73
1 2 6.545666 CCAACACCTATCTACATGCCAAAATA 59.454 38.462 0.00 0.00 0.00 1.40
5 6 3.371487 CCCAACACCTATCTACATGCCAA 60.371 47.826 0.00 0.00 0.00 4.52
28 29 1.149361 GACGCTGTCGACACACCAAA 61.149 55.000 15.76 0.00 39.41 3.28
65 66 4.748102 ACATCACTTATTTCACACGACGTT 59.252 37.500 0.00 0.00 0.00 3.99
66 67 4.304110 ACATCACTTATTTCACACGACGT 58.696 39.130 0.00 0.00 0.00 4.34
85 86 2.559668 CTGTGATGGGAGCAAACAACAT 59.440 45.455 0.00 0.00 0.00 2.71
88 89 1.955778 CACTGTGATGGGAGCAAACAA 59.044 47.619 0.32 0.00 0.00 2.83
91 92 1.608055 CACACTGTGATGGGAGCAAA 58.392 50.000 15.86 0.00 35.23 3.68
96 98 0.843309 ACAACCACACTGTGATGGGA 59.157 50.000 23.70 0.00 40.59 4.37
117 119 3.349006 CAGCTCAGCGGCGTTGTT 61.349 61.111 22.76 7.85 37.29 2.83
127 129 4.335647 ACCAACCCGCCAGCTCAG 62.336 66.667 0.00 0.00 0.00 3.35
139 141 0.678048 GGATCTGTGAGGCCACCAAC 60.678 60.000 5.01 0.00 42.53 3.77
213 215 2.104331 CGATGCCTCTACCGCGTT 59.896 61.111 4.92 0.00 0.00 4.84
215 217 2.353607 GTCGATGCCTCTACCGCG 60.354 66.667 0.00 0.00 0.00 6.46
217 219 0.249073 CAAGGTCGATGCCTCTACCG 60.249 60.000 6.98 0.00 41.12 4.02
223 225 1.604378 CCCTTCAAGGTCGATGCCT 59.396 57.895 1.78 0.00 41.41 4.75
225 227 0.181350 ATCCCCTTCAAGGTCGATGC 59.819 55.000 1.78 0.00 31.93 3.91
248 250 2.408050 GTATTGATGTAGCCGGAGCAG 58.592 52.381 5.05 0.00 43.56 4.24
254 256 3.731216 CAGAACTCGTATTGATGTAGCCG 59.269 47.826 0.00 0.00 0.00 5.52
259 261 5.298527 TCGATACCAGAACTCGTATTGATGT 59.701 40.000 5.75 0.00 32.69 3.06
261 263 6.016192 ACATCGATACCAGAACTCGTATTGAT 60.016 38.462 12.97 12.97 42.78 2.57
264 266 5.507482 CCACATCGATACCAGAACTCGTATT 60.507 44.000 0.00 0.00 34.19 1.89
265 267 4.023107 CCACATCGATACCAGAACTCGTAT 60.023 45.833 0.00 0.00 34.19 3.06
300 310 0.608640 GGCCCATCACTCCTATACGG 59.391 60.000 0.00 0.00 0.00 4.02
322 332 4.350346 CAAAAGAGATCAACGCAACAACA 58.650 39.130 0.00 0.00 0.00 3.33
323 333 3.730715 CCAAAAGAGATCAACGCAACAAC 59.269 43.478 0.00 0.00 0.00 3.32
328 338 2.426522 CCTCCAAAAGAGATCAACGCA 58.573 47.619 0.00 0.00 46.50 5.24
335 345 1.005215 CTGGCACCCTCCAAAAGAGAT 59.995 52.381 0.00 0.00 46.50 2.75
342 352 0.620556 GAAGATCTGGCACCCTCCAA 59.379 55.000 0.00 0.00 35.36 3.53
372 386 3.474570 GCCTCCCTCGCCAGTGAT 61.475 66.667 0.00 0.00 0.00 3.06
375 389 3.474570 GATGCCTCCCTCGCCAGT 61.475 66.667 0.00 0.00 0.00 4.00
378 392 2.031768 GATGATGCCTCCCTCGCC 59.968 66.667 0.00 0.00 0.00 5.54
419 433 1.148157 AGCGCATCGGAGATGAAACG 61.148 55.000 11.47 8.69 45.12 3.60
421 435 0.811219 CCAGCGCATCGGAGATGAAA 60.811 55.000 11.47 0.00 45.12 2.69
474 488 1.131638 TCTGCAGACTGGGTCTTTGT 58.868 50.000 13.74 0.00 41.37 2.83
481 495 4.701651 TGACATTTTAATCTGCAGACTGGG 59.298 41.667 20.97 7.71 0.00 4.45
484 498 4.142816 GCGTGACATTTTAATCTGCAGACT 60.143 41.667 20.97 11.63 0.00 3.24
530 547 2.538141 CCCAACCCAGGCTGAAGGA 61.538 63.158 17.94 0.00 0.00 3.36
540 557 1.154921 CCACCAACATCCCAACCCA 59.845 57.895 0.00 0.00 0.00 4.51
542 559 0.898326 GACCCACCAACATCCCAACC 60.898 60.000 0.00 0.00 0.00 3.77
544 561 1.074072 CGACCCACCAACATCCCAA 59.926 57.895 0.00 0.00 0.00 4.12
545 562 2.753701 CGACCCACCAACATCCCA 59.246 61.111 0.00 0.00 0.00 4.37
552 570 3.948719 GGAGCACCGACCCACCAA 61.949 66.667 0.00 0.00 0.00 3.67
600 622 1.824230 GCCAATGATACAAAGCACCCA 59.176 47.619 0.00 0.00 0.00 4.51
607 629 9.791801 TCTATTGCTAATAGCCAATGATACAAA 57.208 29.630 10.06 0.00 41.51 2.83
612 634 9.393512 GATCTTCTATTGCTAATAGCCAATGAT 57.606 33.333 10.06 8.18 41.51 2.45
616 638 8.535335 CCTAGATCTTCTATTGCTAATAGCCAA 58.465 37.037 10.06 4.86 41.51 4.52
632 654 5.923733 TGTGAAAGAGACCCTAGATCTTC 57.076 43.478 0.00 0.00 32.21 2.87
642 664 7.442666 ACAGAGAAAGTATTTGTGAAAGAGACC 59.557 37.037 0.00 0.00 39.27 3.85
800 822 9.603921 CCCTCTATTTCTAAATACAAACCGTTA 57.396 33.333 0.00 0.00 0.00 3.18
801 823 8.323567 TCCCTCTATTTCTAAATACAAACCGTT 58.676 33.333 0.00 0.00 0.00 4.44
802 824 7.854337 TCCCTCTATTTCTAAATACAAACCGT 58.146 34.615 0.00 0.00 0.00 4.83
803 825 7.985752 ACTCCCTCTATTTCTAAATACAAACCG 59.014 37.037 0.00 0.00 0.00 4.44
820 842 8.729805 TTTTGTTTTACGTTTTACTCCCTCTA 57.270 30.769 0.00 0.00 0.00 2.43
821 843 7.628769 TTTTGTTTTACGTTTTACTCCCTCT 57.371 32.000 0.00 0.00 0.00 3.69
855 877 1.343478 ACTGCAGCCCACCTACTCTAT 60.343 52.381 15.27 0.00 0.00 1.98
870 892 0.830444 ACTTCCGACACCCTACTGCA 60.830 55.000 0.00 0.00 0.00 4.41
871 893 0.389948 CACTTCCGACACCCTACTGC 60.390 60.000 0.00 0.00 0.00 4.40
875 897 0.606604 GCTTCACTTCCGACACCCTA 59.393 55.000 0.00 0.00 0.00 3.53
880 902 2.035237 AACGGGCTTCACTTCCGACA 62.035 55.000 8.02 0.00 45.96 4.35
947 975 0.676782 GTGGTGGTTTGGATCGAGGG 60.677 60.000 0.00 0.00 0.00 4.30
960 988 1.219124 CTGGACGGATCTGTGGTGG 59.781 63.158 13.13 0.00 0.00 4.61
985 1013 0.178816 TCCATCTTCCCCCTTCCCAA 60.179 55.000 0.00 0.00 0.00 4.12
1117 1145 4.760840 CGCTTGCTGCTGCTGCTG 62.761 66.667 27.67 21.23 40.48 4.41
1200 1228 3.013219 GGCTTTCTGGAGAAACAGATCC 58.987 50.000 0.00 0.00 46.07 3.36
1205 1233 1.133823 TGCTGGCTTTCTGGAGAAACA 60.134 47.619 0.00 0.00 38.94 2.83
1227 1255 6.019801 CGATACCAGATTTGTAACCGAAGAAG 60.020 42.308 0.00 0.00 0.00 2.85
1306 1342 4.464069 TGAAACTGAAACCCAAAAGTGG 57.536 40.909 0.00 0.00 45.53 4.00
1307 1343 5.478407 ACTTGAAACTGAAACCCAAAAGTG 58.522 37.500 0.00 0.00 0.00 3.16
1308 1344 5.738619 ACTTGAAACTGAAACCCAAAAGT 57.261 34.783 0.00 0.00 0.00 2.66
1309 1345 7.817478 ACTAAACTTGAAACTGAAACCCAAAAG 59.183 33.333 0.00 0.00 0.00 2.27
1310 1346 7.672240 ACTAAACTTGAAACTGAAACCCAAAA 58.328 30.769 0.00 0.00 0.00 2.44
1313 1349 6.844097 AACTAAACTTGAAACTGAAACCCA 57.156 33.333 0.00 0.00 0.00 4.51
1316 1352 9.620660 TCTTCAAACTAAACTTGAAACTGAAAC 57.379 29.630 0.26 0.00 41.10 2.78
1349 1385 4.991056 ACAGTACACAAGTGCAGAGTAATG 59.009 41.667 0.00 7.55 36.96 1.90
1362 1398 5.429130 TGGTATGTTTGACACAGTACACAA 58.571 37.500 0.00 0.00 39.40 3.33
1427 1474 2.226912 CGACAGCCTATACCAGAGCTAC 59.773 54.545 0.00 0.00 31.81 3.58
1439 1486 1.476891 GTCAGAATGGTCGACAGCCTA 59.523 52.381 18.91 0.00 36.16 3.93
1447 1494 5.718649 AAACGATTATGTCAGAATGGTCG 57.281 39.130 8.10 4.58 36.16 4.79
1476 1523 6.645415 CCTTCTGTGTAAGTGTTAAGAACGAT 59.355 38.462 0.00 0.00 0.00 3.73
1477 1524 5.981315 CCTTCTGTGTAAGTGTTAAGAACGA 59.019 40.000 0.00 0.00 0.00 3.85
1478 1525 5.333111 GCCTTCTGTGTAAGTGTTAAGAACG 60.333 44.000 0.00 0.00 0.00 3.95
1479 1526 5.758784 AGCCTTCTGTGTAAGTGTTAAGAAC 59.241 40.000 0.00 0.00 0.00 3.01
1480 1527 5.758296 CAGCCTTCTGTGTAAGTGTTAAGAA 59.242 40.000 0.00 0.00 35.61 2.52
1481 1528 5.297547 CAGCCTTCTGTGTAAGTGTTAAGA 58.702 41.667 0.00 0.00 35.61 2.10
1482 1529 5.597813 CAGCCTTCTGTGTAAGTGTTAAG 57.402 43.478 0.00 0.00 35.61 1.85
1495 1542 4.391405 AAGGAACAAAAACAGCCTTCTG 57.609 40.909 0.00 0.00 45.71 3.02
1496 1543 5.420725 AAAAGGAACAAAAACAGCCTTCT 57.579 34.783 0.00 0.00 37.96 2.85
1497 1544 7.169813 CAGATAAAAGGAACAAAAACAGCCTTC 59.830 37.037 0.00 0.00 37.96 3.46
1498 1545 6.986231 CAGATAAAAGGAACAAAAACAGCCTT 59.014 34.615 0.00 0.00 40.49 4.35
1499 1546 6.515832 CAGATAAAAGGAACAAAAACAGCCT 58.484 36.000 0.00 0.00 0.00 4.58
1502 1549 7.569957 GCATGCAGATAAAAGGAACAAAAACAG 60.570 37.037 14.21 0.00 0.00 3.16
1507 1554 4.617995 CGGCATGCAGATAAAAGGAACAAA 60.618 41.667 21.36 0.00 0.00 2.83
1524 1577 3.261580 TGATACAGAAGTCAACGGCATG 58.738 45.455 0.00 0.00 0.00 4.06
1526 1579 3.610040 ATGATACAGAAGTCAACGGCA 57.390 42.857 0.00 0.00 0.00 5.69
1571 1632 9.452287 GTACAACAGGTATATTTAAGGAAACCA 57.548 33.333 0.00 0.00 33.76 3.67
1591 2153 1.310904 TGGTTGGCTTTCCGTACAAC 58.689 50.000 0.00 0.00 41.71 3.32
1739 2301 5.361285 ACAAACATTTGCAGTGGGTACTTAA 59.639 36.000 4.25 0.00 41.79 1.85
1791 2353 0.179043 TCACAGTTTGGCGGCAGTTA 60.179 50.000 12.87 0.00 0.00 2.24
1795 2357 1.971167 GGATCACAGTTTGGCGGCA 60.971 57.895 7.97 7.97 0.00 5.69
1796 2358 2.700773 GGGATCACAGTTTGGCGGC 61.701 63.158 0.00 0.00 0.00 6.53
1797 2359 2.398554 CGGGATCACAGTTTGGCGG 61.399 63.158 0.00 0.00 0.00 6.13
1798 2360 2.398554 CCGGGATCACAGTTTGGCG 61.399 63.158 0.00 0.00 0.00 5.69
1814 2376 2.355756 CCACAATTAGATCAGGCAACCG 59.644 50.000 0.00 0.00 37.17 4.44
1821 2383 3.379372 CAGGCAACCCACAATTAGATCAG 59.621 47.826 0.00 0.00 37.17 2.90
1828 2390 2.042162 AGATCTCAGGCAACCCACAATT 59.958 45.455 0.00 0.00 37.17 2.32
1834 2396 2.725221 AATGAGATCTCAGGCAACCC 57.275 50.000 28.26 0.00 43.61 4.11
1836 2398 3.883669 AGGAAATGAGATCTCAGGCAAC 58.116 45.455 28.26 17.30 43.61 4.17
1838 2400 4.343526 GTCTAGGAAATGAGATCTCAGGCA 59.656 45.833 28.26 7.91 43.61 4.75
1848 2410 6.047870 CCAGAATGAGTGTCTAGGAAATGAG 58.952 44.000 0.00 0.00 39.69 2.90
1850 2412 5.982356 TCCAGAATGAGTGTCTAGGAAATG 58.018 41.667 0.00 0.00 39.69 2.32
1855 2417 7.493971 CACTATTTTCCAGAATGAGTGTCTAGG 59.506 40.741 0.00 0.00 39.69 3.02
1857 2419 8.134202 TCACTATTTTCCAGAATGAGTGTCTA 57.866 34.615 12.69 0.00 39.69 2.59
1859 2421 7.672983 TTCACTATTTTCCAGAATGAGTGTC 57.327 36.000 12.69 0.00 39.69 3.67
1992 2577 9.025041 TCAAGAATAACTGTCTGATTGTCTCTA 57.975 33.333 0.00 0.00 0.00 2.43
2044 2633 2.096218 GTCAGAACGATCAACAACCTGC 60.096 50.000 0.00 0.00 0.00 4.85
2049 2638 5.867174 ACGATTATGTCAGAACGATCAACAA 59.133 36.000 5.30 0.00 30.42 2.83
2053 2642 6.183360 CCAAAACGATTATGTCAGAACGATCA 60.183 38.462 8.48 0.00 0.00 2.92
2097 2686 6.677913 AGGAAAGAAAACAACATTCGGTATG 58.322 36.000 0.00 0.00 40.26 2.39
2154 2748 6.425735 TGGTGTCATGAGTCCATTAATGATT 58.574 36.000 17.23 1.74 32.07 2.57
2312 2998 5.987347 AGAGGATTGTTTCTGTTTGCAATTG 59.013 36.000 0.00 0.00 32.47 2.32
2364 3080 4.019792 AGTCCATATGTGTGCAGACAAA 57.980 40.909 21.58 0.00 32.49 2.83
2410 3127 3.657398 ATCAGATCATGCAACCAGGAA 57.343 42.857 0.00 0.00 35.16 3.36
2515 3233 1.263356 CCACTCCTCCTTGTCCGTAA 58.737 55.000 0.00 0.00 0.00 3.18
2519 3237 1.539124 ACCCCACTCCTCCTTGTCC 60.539 63.158 0.00 0.00 0.00 4.02
2532 3250 4.660611 TAAGCGTCCCCCACCCCA 62.661 66.667 0.00 0.00 0.00 4.96
2536 3254 0.900421 AAGTAGTAAGCGTCCCCCAC 59.100 55.000 0.00 0.00 0.00 4.61
2544 3262 2.076863 AGCAAAGCCAAGTAGTAAGCG 58.923 47.619 0.00 0.00 0.00 4.68
2560 3278 0.106521 TACTGCAGCAGTGACAGCAA 59.893 50.000 34.25 12.81 45.01 3.91
2624 3410 5.994054 GCTAGATGCTTCATAAGTGATTCCA 59.006 40.000 2.07 0.00 38.95 3.53
2737 3524 0.960364 AACGCCAGCACCTATGGTTG 60.960 55.000 0.00 0.00 40.17 3.77
2754 3541 4.951094 ACATAGTCCCTCTACTCTCACAAC 59.049 45.833 0.00 0.00 0.00 3.32
2821 3608 4.668636 TCCCCTGGTTAACCTAAACATTG 58.331 43.478 24.78 6.28 34.38 2.82
2917 3704 4.778842 AATGTGATAGTCGCGAAATGTC 57.221 40.909 12.06 11.39 0.00 3.06
2924 3711 5.248087 CAACTACAAAATGTGATAGTCGCG 58.752 41.667 0.00 0.00 0.00 5.87
2963 3750 8.487176 GTGAAACGATATTGCAAAGAAAACAAT 58.513 29.630 1.71 0.00 37.71 2.71
3036 3828 3.761685 TTGGGGGAATAGGTTTTACCC 57.238 47.619 0.00 0.00 39.75 3.69
3038 3830 6.183360 CGGTATTTTGGGGGAATAGGTTTTAC 60.183 42.308 0.00 0.00 0.00 2.01
3067 3859 3.569194 TTCAGGCTGTTAACACCAAGA 57.431 42.857 21.59 17.18 0.00 3.02
3068 3860 4.647424 TTTTCAGGCTGTTAACACCAAG 57.353 40.909 21.59 15.81 0.00 3.61
3069 3861 5.606348 ATTTTTCAGGCTGTTAACACCAA 57.394 34.783 21.59 11.76 0.00 3.67
3071 3863 5.842907 AGAATTTTTCAGGCTGTTAACACC 58.157 37.500 15.27 11.15 0.00 4.16
3073 3865 7.504238 TCCTTAGAATTTTTCAGGCTGTTAACA 59.496 33.333 15.27 8.28 0.00 2.41
3074 3866 7.882179 TCCTTAGAATTTTTCAGGCTGTTAAC 58.118 34.615 15.27 0.00 0.00 2.01
3075 3867 8.472007 TTCCTTAGAATTTTTCAGGCTGTTAA 57.528 30.769 15.27 7.52 0.00 2.01
3077 3869 6.976934 TTCCTTAGAATTTTTCAGGCTGTT 57.023 33.333 15.27 0.00 0.00 3.16
3078 3870 6.976934 TTTCCTTAGAATTTTTCAGGCTGT 57.023 33.333 15.27 0.00 0.00 4.40
3079 3871 8.715088 CAAATTTCCTTAGAATTTTTCAGGCTG 58.285 33.333 8.58 8.58 34.78 4.85
3222 4022 2.191128 AAGTGAAAAGCAGCTCGGAT 57.809 45.000 0.00 0.00 0.00 4.18
3224 4024 2.781945 AAAAGTGAAAAGCAGCTCGG 57.218 45.000 0.00 0.00 0.00 4.63
3225 4025 3.251004 AGGTAAAAGTGAAAAGCAGCTCG 59.749 43.478 0.00 0.00 0.00 5.03
3258 4058 2.055689 CTGCAGTGAGGGACCAACCA 62.056 60.000 5.25 0.00 41.20 3.67
3294 4094 2.159338 CCATGCCTCTGATTTTTCACCG 60.159 50.000 0.00 0.00 0.00 4.94
3297 4097 3.454719 TCCCATGCCTCTGATTTTTCA 57.545 42.857 0.00 0.00 0.00 2.69
3312 4112 1.223487 CACGGGGTCGAATTCCCAT 59.777 57.895 16.78 2.18 46.26 4.00
3436 4236 8.154203 ACCGTCTGGAAAATTTTGGATAATTTT 58.846 29.630 8.47 6.74 45.50 1.82
3437 4237 7.676004 ACCGTCTGGAAAATTTTGGATAATTT 58.324 30.769 8.47 0.00 37.71 1.82
3438 4238 7.239763 ACCGTCTGGAAAATTTTGGATAATT 57.760 32.000 8.47 0.00 39.21 1.40
3440 4240 7.449086 AGTTACCGTCTGGAAAATTTTGGATAA 59.551 33.333 8.47 2.09 39.21 1.75
3449 4258 4.618920 AGACAGTTACCGTCTGGAAAAT 57.381 40.909 0.00 0.00 42.12 1.82
3458 4267 2.228343 CTCCGAGAAAGACAGTTACCGT 59.772 50.000 0.00 0.00 0.00 4.83
3466 4275 0.903454 GACCCCCTCCGAGAAAGACA 60.903 60.000 0.00 0.00 0.00 3.41
3469 4278 1.597461 GTGACCCCCTCCGAGAAAG 59.403 63.158 0.00 0.00 0.00 2.62
3496 4306 1.226746 ACGCTTTTTCTCTCGGTTGG 58.773 50.000 0.00 0.00 0.00 3.77
3498 4308 2.285977 ACAACGCTTTTTCTCTCGGTT 58.714 42.857 0.00 0.00 0.00 4.44
3512 4322 3.059634 TGTGCTAGTTTTGAACAACGC 57.940 42.857 0.00 0.00 0.00 4.84
3513 4323 5.095691 AGATGTGCTAGTTTTGAACAACG 57.904 39.130 0.00 0.00 0.00 4.10
3514 4324 6.578919 GCTAAGATGTGCTAGTTTTGAACAAC 59.421 38.462 0.00 0.00 0.00 3.32
3606 4417 5.130477 GTCACCAACTGATATAGGAAGGGAA 59.870 44.000 0.00 0.00 0.00 3.97
3608 4419 4.408921 TGTCACCAACTGATATAGGAAGGG 59.591 45.833 0.00 0.00 0.00 3.95
3609 4420 5.614324 TGTCACCAACTGATATAGGAAGG 57.386 43.478 0.00 0.00 0.00 3.46
3610 4421 6.878317 TCTTGTCACCAACTGATATAGGAAG 58.122 40.000 0.00 0.00 0.00 3.46
3613 4424 7.875041 CCTAATCTTGTCACCAACTGATATAGG 59.125 40.741 0.00 0.00 0.00 2.57
3885 4720 5.050769 AGCGCAATTCAATACGAAGATAGTG 60.051 40.000 11.47 0.00 36.95 2.74
3906 4741 5.117592 CAGGCTTCAAAATTCTACAAAAGCG 59.882 40.000 0.00 0.00 38.75 4.68
3932 4767 7.160049 ACTTCCATGCTCTGAGTAATCATATG 58.840 38.462 6.53 0.00 0.00 1.78
3985 4820 5.076182 TGGTCAATTCTTCAACCTGCATAA 58.924 37.500 0.00 0.00 32.82 1.90
4028 4863 6.542821 TCCTGAAATGGAGTTCAATAACTGT 58.457 36.000 0.00 0.00 46.09 3.55
4159 4994 6.227298 TGCCACCTAATTGAAACTTGAAAA 57.773 33.333 0.00 0.00 0.00 2.29
4161 4996 5.304101 ACATGCCACCTAATTGAAACTTGAA 59.696 36.000 0.00 0.00 0.00 2.69
4173 5008 5.381757 AGACAAAAGTAACATGCCACCTAA 58.618 37.500 0.00 0.00 0.00 2.69
4200 5038 2.027192 CCCTGCAGTTAAGCCTGACTAA 60.027 50.000 13.81 0.00 34.23 2.24
4265 5103 8.542080 CAAATGGCCCCACAATATTCATATATT 58.458 33.333 0.00 0.00 37.41 1.28
4284 5122 6.593382 TGCATTTTGGTAATTCTACAAATGGC 59.407 34.615 11.86 12.52 34.74 4.40
4292 5130 7.731054 ACTTTTGGTGCATTTTGGTAATTCTA 58.269 30.769 0.00 0.00 0.00 2.10
4337 5176 6.317642 TGCTAGTGTTTCAACTTTCAAGCTAA 59.682 34.615 0.00 0.00 0.00 3.09
4342 5181 6.292865 CGATCTGCTAGTGTTTCAACTTTCAA 60.293 38.462 0.00 0.00 0.00 2.69
4493 5333 8.689972 ACTCTAAAAGGGCATCTATTTTGAATG 58.310 33.333 0.00 0.00 0.00 2.67
4539 5379 4.771577 TGGCCAATATCAACATTTCACACT 59.228 37.500 0.61 0.00 0.00 3.55
4589 5429 6.512903 GCTTTGTGTAGGAAAACAGAGGTAAC 60.513 42.308 0.00 0.00 31.09 2.50
4598 5438 4.429108 TGCTTTGCTTTGTGTAGGAAAAC 58.571 39.130 0.00 0.00 35.47 2.43
4733 5575 5.196695 GGATGTCCTTTCAGCCTCTTAATT 58.803 41.667 0.00 0.00 40.29 1.40
4734 5576 4.228210 TGGATGTCCTTTCAGCCTCTTAAT 59.772 41.667 0.09 0.00 43.37 1.40
4735 5577 3.587061 TGGATGTCCTTTCAGCCTCTTAA 59.413 43.478 0.09 0.00 43.37 1.85
4736 5578 3.181329 TGGATGTCCTTTCAGCCTCTTA 58.819 45.455 0.09 0.00 43.37 2.10
4818 5660 2.480419 GTGTGCAAGTTACTCTCGCAAT 59.520 45.455 5.80 0.00 33.76 3.56
4821 5663 1.784525 AGTGTGCAAGTTACTCTCGC 58.215 50.000 0.00 0.00 0.00 5.03
4878 5720 2.110011 ACCCACAATTAGATATGGCCCC 59.890 50.000 0.00 0.00 0.00 5.80
4879 5721 3.525800 ACCCACAATTAGATATGGCCC 57.474 47.619 0.00 0.00 0.00 5.80
4880 5722 3.005791 GCAACCCACAATTAGATATGGCC 59.994 47.826 0.00 0.00 0.00 5.36
4881 5723 3.005791 GGCAACCCACAATTAGATATGGC 59.994 47.826 0.00 0.00 0.00 4.40
4883 5725 5.132502 TCAGGCAACCCACAATTAGATATG 58.867 41.667 0.00 0.00 37.17 1.78
4888 5730 3.071874 TCTCAGGCAACCCACAATTAG 57.928 47.619 0.00 0.00 37.17 1.73
4889 5731 3.266772 AGATCTCAGGCAACCCACAATTA 59.733 43.478 0.00 0.00 37.17 1.40
4895 5737 1.951209 TACAGATCTCAGGCAACCCA 58.049 50.000 0.00 0.00 37.17 4.51
4896 5738 3.567478 ATTACAGATCTCAGGCAACCC 57.433 47.619 0.00 0.00 37.17 4.11
4897 5739 6.107901 AGATATTACAGATCTCAGGCAACC 57.892 41.667 0.00 0.00 37.17 3.77
4901 5743 5.648526 TCCGTAGATATTACAGATCTCAGGC 59.351 44.000 0.00 0.00 35.30 4.85
4902 5744 6.317642 CCTCCGTAGATATTACAGATCTCAGG 59.682 46.154 0.00 0.00 35.30 3.86
4904 5746 6.780901 ACCTCCGTAGATATTACAGATCTCA 58.219 40.000 0.00 0.00 35.30 3.27
4905 5747 8.042515 ACTACCTCCGTAGATATTACAGATCTC 58.957 40.741 4.36 0.00 44.18 2.75
4906 5748 7.920227 ACTACCTCCGTAGATATTACAGATCT 58.080 38.462 4.36 0.00 44.18 2.75
4907 5749 9.835389 ATACTACCTCCGTAGATATTACAGATC 57.165 37.037 4.36 0.00 44.18 2.75
4908 5750 9.835389 GATACTACCTCCGTAGATATTACAGAT 57.165 37.037 4.36 0.00 44.18 2.90
4909 5751 8.263640 GGATACTACCTCCGTAGATATTACAGA 58.736 40.741 4.36 0.00 44.18 3.41
4910 5752 8.045507 TGGATACTACCTCCGTAGATATTACAG 58.954 40.741 4.36 0.00 44.18 2.74
4911 5753 7.921304 TGGATACTACCTCCGTAGATATTACA 58.079 38.462 4.36 1.63 44.18 2.41
4918 5765 7.236529 ACAAATATGGATACTACCTCCGTAGA 58.763 38.462 4.36 0.00 44.18 2.59
4930 5777 9.886132 AGGGTCGATTATTACAAATATGGATAC 57.114 33.333 0.00 0.00 0.00 2.24
4954 5801 1.536766 ACGTGTGCATTGTCAATGAGG 59.463 47.619 26.36 14.51 41.46 3.86
4968 5816 4.973663 GGAACATTTTTGGAACTACGTGTG 59.026 41.667 0.00 0.00 0.00 3.82
5053 5901 8.778358 CATAAATAGAGTTGTGGCTAAATCCTC 58.222 37.037 0.00 0.00 0.00 3.71
5107 5955 8.691661 TGAATATTTCTCCCAAGTTAATAGCC 57.308 34.615 0.00 0.00 0.00 3.93
5245 6094 3.057736 GCTGGTCAGTACTTTACGTGAGA 60.058 47.826 0.00 0.00 0.00 3.27
5409 6282 3.499737 GGCAGGTCGCGTTGATGG 61.500 66.667 5.77 0.00 43.84 3.51
5419 6292 3.791245 TCACAAAAATTGTTGGCAGGTC 58.209 40.909 12.96 0.00 43.23 3.85
5422 6295 5.066246 ACCAAATCACAAAAATTGTTGGCAG 59.934 36.000 12.96 2.85 43.23 4.85
5443 6316 6.183360 GCAATGGTTAGGATAGAACTCTACCA 60.183 42.308 0.00 0.00 37.26 3.25
5444 6317 6.224584 GCAATGGTTAGGATAGAACTCTACC 58.775 44.000 0.00 0.00 0.00 3.18
5547 6420 2.168728 GGTCCGATAGTCAGAGCCTTTT 59.831 50.000 0.00 0.00 0.00 2.27
5548 6421 1.757699 GGTCCGATAGTCAGAGCCTTT 59.242 52.381 0.00 0.00 0.00 3.11
5549 6422 1.404843 GGTCCGATAGTCAGAGCCTT 58.595 55.000 0.00 0.00 0.00 4.35
5560 6433 6.494666 AATTAATGTTCTGAGGGTCCGATA 57.505 37.500 0.00 0.00 0.00 2.92
5561 6434 5.373812 AATTAATGTTCTGAGGGTCCGAT 57.626 39.130 0.00 0.00 0.00 4.18
5600 6476 1.880271 TTTATTTCACGCGGTGGTGA 58.120 45.000 12.47 1.07 44.74 4.02
5610 6486 3.901667 AGACGCGTCGATTTATTTCAC 57.098 42.857 31.56 5.59 34.09 3.18
5635 6518 5.700832 CAGACTACTCCAAGCATGTTTACAA 59.299 40.000 0.00 0.00 0.00 2.41
5668 6551 5.160641 CACCACTTAAAAATTCCATGTCCG 58.839 41.667 0.00 0.00 0.00 4.79
5705 6588 1.135803 ACACGCACTCAACACACAAAC 60.136 47.619 0.00 0.00 0.00 2.93
5717 6600 7.197071 TCATAAAACTCAAAATACACGCACT 57.803 32.000 0.00 0.00 0.00 4.40
5753 6636 2.109128 TGCTTGGTCCATTTTACAGGGA 59.891 45.455 0.00 0.00 0.00 4.20
5754 6637 2.524306 TGCTTGGTCCATTTTACAGGG 58.476 47.619 0.00 0.00 0.00 4.45
5755 6638 7.596494 CATATATGCTTGGTCCATTTTACAGG 58.404 38.462 0.00 0.00 0.00 4.00
5793 6693 1.065418 ACCGATCAGGCCGAAGAATTT 60.065 47.619 0.00 0.00 46.52 1.82
5932 6983 8.190784 ACATATTTCCAGCAAACTATTAAGTGC 58.809 33.333 0.00 0.00 35.62 4.40
5993 7057 2.672961 TACGGAGATGAGGCTGTTTG 57.327 50.000 0.00 0.00 0.00 2.93
6073 7138 4.441792 GCCAAAATATGAAACATCCACCC 58.558 43.478 0.00 0.00 0.00 4.61
6122 7188 6.434028 TGAAATTTCATTCAGGTTCGAATCCT 59.566 34.615 16.91 9.01 34.50 3.24
6155 7221 3.365265 GGTGTTGGAGCTTGGCGG 61.365 66.667 0.00 0.00 0.00 6.13
6156 7222 1.926511 GATGGTGTTGGAGCTTGGCG 61.927 60.000 0.00 0.00 0.00 5.69
6160 7226 2.932663 CACGATGGTGTTGGAGCTT 58.067 52.632 0.00 0.00 39.38 3.74
6171 7237 1.202177 GCCTTGCATGTAACACGATGG 60.202 52.381 0.00 0.00 0.00 3.51
6175 7241 0.810648 ATGGCCTTGCATGTAACACG 59.189 50.000 3.32 0.00 0.00 4.49
6201 7267 3.482783 GTCTTCTGGAGCGCACGC 61.483 66.667 11.47 6.99 42.33 5.34
6206 7272 0.320247 ACAGCTTGTCTTCTGGAGCG 60.320 55.000 0.00 0.00 39.99 5.03
6222 7288 4.442073 CCAACTGAAAATGAAAGCGAACAG 59.558 41.667 0.00 0.00 0.00 3.16
6271 7337 1.152798 ACCGGACGGAGGGAGTATC 60.153 63.158 18.80 0.00 38.96 2.24
6276 7342 1.823169 CTTTTCACCGGACGGAGGGA 61.823 60.000 18.80 8.89 38.96 4.20
6277 7343 1.375523 CTTTTCACCGGACGGAGGG 60.376 63.158 18.80 6.62 38.96 4.30
6278 7344 0.949105 CACTTTTCACCGGACGGAGG 60.949 60.000 18.80 9.15 38.96 4.30
6279 7345 0.249741 ACACTTTTCACCGGACGGAG 60.250 55.000 18.80 10.03 38.96 4.63
6280 7346 1.039068 TACACTTTTCACCGGACGGA 58.961 50.000 18.80 0.00 38.96 4.69
6281 7347 1.142474 GTACACTTTTCACCGGACGG 58.858 55.000 9.46 9.56 42.03 4.79
6282 7348 1.855513 TGTACACTTTTCACCGGACG 58.144 50.000 9.46 0.00 0.00 4.79
6283 7349 3.660865 AGATGTACACTTTTCACCGGAC 58.339 45.455 9.46 0.00 0.00 4.79
6284 7350 4.768448 TCTAGATGTACACTTTTCACCGGA 59.232 41.667 9.46 0.00 0.00 5.14
6285 7351 5.068234 TCTAGATGTACACTTTTCACCGG 57.932 43.478 0.00 0.00 0.00 5.28
6286 7352 7.596749 ATTTCTAGATGTACACTTTTCACCG 57.403 36.000 0.00 0.00 0.00 4.94
6293 7359 9.778741 TGTCTGAAAATTTCTAGATGTACACTT 57.221 29.630 7.29 0.00 0.00 3.16
6294 7360 9.778741 TTGTCTGAAAATTTCTAGATGTACACT 57.221 29.630 7.29 0.13 0.00 3.55
6305 7371 9.933723 CCCTTCATAATTTGTCTGAAAATTTCT 57.066 29.630 7.29 0.00 39.73 2.52
6306 7372 9.154847 CCCCTTCATAATTTGTCTGAAAATTTC 57.845 33.333 12.42 0.00 39.73 2.17
6307 7373 8.879227 TCCCCTTCATAATTTGTCTGAAAATTT 58.121 29.630 12.42 5.00 39.73 1.82
6308 7374 8.434589 TCCCCTTCATAATTTGTCTGAAAATT 57.565 30.769 12.06 12.06 41.45 1.82
6309 7375 7.675619 ACTCCCCTTCATAATTTGTCTGAAAAT 59.324 33.333 0.00 0.00 0.00 1.82
6310 7376 7.010160 ACTCCCCTTCATAATTTGTCTGAAAA 58.990 34.615 0.00 0.00 0.00 2.29
6311 7377 6.552008 ACTCCCCTTCATAATTTGTCTGAAA 58.448 36.000 0.00 0.00 0.00 2.69
6312 7378 6.139679 ACTCCCCTTCATAATTTGTCTGAA 57.860 37.500 0.00 0.00 0.00 3.02
6313 7379 5.779241 ACTCCCCTTCATAATTTGTCTGA 57.221 39.130 0.00 0.00 0.00 3.27
6314 7380 7.938140 TTTACTCCCCTTCATAATTTGTCTG 57.062 36.000 0.00 0.00 0.00 3.51
6315 7381 8.950007 TTTTTACTCCCCTTCATAATTTGTCT 57.050 30.769 0.00 0.00 0.00 3.41
6316 7382 9.586435 CATTTTTACTCCCCTTCATAATTTGTC 57.414 33.333 0.00 0.00 0.00 3.18
6317 7383 8.040727 GCATTTTTACTCCCCTTCATAATTTGT 58.959 33.333 0.00 0.00 0.00 2.83
6318 7384 8.040132 TGCATTTTTACTCCCCTTCATAATTTG 58.960 33.333 0.00 0.00 0.00 2.32
6319 7385 8.144862 TGCATTTTTACTCCCCTTCATAATTT 57.855 30.769 0.00 0.00 0.00 1.82
6320 7386 7.732222 TGCATTTTTACTCCCCTTCATAATT 57.268 32.000 0.00 0.00 0.00 1.40
6321 7387 7.919385 ATGCATTTTTACTCCCCTTCATAAT 57.081 32.000 0.00 0.00 0.00 1.28
6322 7388 7.398618 TCAATGCATTTTTACTCCCCTTCATAA 59.601 33.333 9.83 0.00 0.00 1.90
6323 7389 6.894654 TCAATGCATTTTTACTCCCCTTCATA 59.105 34.615 9.83 0.00 0.00 2.15
6324 7390 5.721000 TCAATGCATTTTTACTCCCCTTCAT 59.279 36.000 9.83 0.00 0.00 2.57
6325 7391 5.083122 TCAATGCATTTTTACTCCCCTTCA 58.917 37.500 9.83 0.00 0.00 3.02
6326 7392 5.418840 TCTCAATGCATTTTTACTCCCCTTC 59.581 40.000 9.83 0.00 0.00 3.46
6327 7393 5.332743 TCTCAATGCATTTTTACTCCCCTT 58.667 37.500 9.83 0.00 0.00 3.95
6328 7394 4.934356 TCTCAATGCATTTTTACTCCCCT 58.066 39.130 9.83 0.00 0.00 4.79
6329 7395 5.418840 TCTTCTCAATGCATTTTTACTCCCC 59.581 40.000 9.83 0.00 0.00 4.81
6330 7396 6.515272 TCTTCTCAATGCATTTTTACTCCC 57.485 37.500 9.83 0.00 0.00 4.30
6331 7397 6.474751 GCATCTTCTCAATGCATTTTTACTCC 59.525 38.462 9.83 0.00 46.93 3.85
6332 7398 7.447243 GCATCTTCTCAATGCATTTTTACTC 57.553 36.000 9.83 0.00 46.93 2.59
6343 7409 1.741706 ACGGCTTGCATCTTCTCAATG 59.258 47.619 0.00 0.00 0.00 2.82
6344 7410 2.012673 GACGGCTTGCATCTTCTCAAT 58.987 47.619 0.00 0.00 0.00 2.57
6345 7411 1.270785 TGACGGCTTGCATCTTCTCAA 60.271 47.619 0.00 0.00 0.00 3.02
6346 7412 0.321346 TGACGGCTTGCATCTTCTCA 59.679 50.000 0.00 0.00 0.00 3.27
6347 7413 1.596727 GATGACGGCTTGCATCTTCTC 59.403 52.381 0.00 0.00 38.25 2.87
6348 7414 1.209019 AGATGACGGCTTGCATCTTCT 59.791 47.619 0.00 0.00 46.65 2.85
6349 7415 1.661341 AGATGACGGCTTGCATCTTC 58.339 50.000 0.00 0.00 46.65 2.87
6350 7416 3.869623 AGATGACGGCTTGCATCTT 57.130 47.368 0.00 0.00 46.65 2.40
6352 7418 1.202510 AGAGAGATGACGGCTTGCATC 60.203 52.381 0.00 0.00 40.85 3.91
6353 7419 0.829333 AGAGAGATGACGGCTTGCAT 59.171 50.000 0.00 0.00 0.00 3.96
6354 7420 0.174389 GAGAGAGATGACGGCTTGCA 59.826 55.000 0.00 0.00 0.00 4.08
6355 7421 0.529555 GGAGAGAGATGACGGCTTGC 60.530 60.000 0.00 0.00 0.00 4.01
6356 7422 1.066908 GAGGAGAGAGATGACGGCTTG 59.933 57.143 0.00 0.00 0.00 4.01
6357 7423 1.064017 AGAGGAGAGAGATGACGGCTT 60.064 52.381 0.00 0.00 0.00 4.35
6358 7424 0.550914 AGAGGAGAGAGATGACGGCT 59.449 55.000 0.00 0.00 0.00 5.52
6359 7425 1.398692 AAGAGGAGAGAGATGACGGC 58.601 55.000 0.00 0.00 0.00 5.68
6360 7426 4.204012 ACTAAAGAGGAGAGAGATGACGG 58.796 47.826 0.00 0.00 0.00 4.79
6361 7427 5.828299 AACTAAAGAGGAGAGAGATGACG 57.172 43.478 0.00 0.00 0.00 4.35
6362 7428 6.040054 GGGTAACTAAAGAGGAGAGAGATGAC 59.960 46.154 0.00 0.00 0.00 3.06
6363 7429 6.130569 GGGTAACTAAAGAGGAGAGAGATGA 58.869 44.000 0.00 0.00 0.00 2.92
6364 7430 5.894393 TGGGTAACTAAAGAGGAGAGAGATG 59.106 44.000 0.00 0.00 0.00 2.90
6365 7431 6.093617 TGGGTAACTAAAGAGGAGAGAGAT 57.906 41.667 0.00 0.00 0.00 2.75
6366 7432 5.531753 TGGGTAACTAAAGAGGAGAGAGA 57.468 43.478 0.00 0.00 0.00 3.10
6367 7433 5.105269 GGTTGGGTAACTAAAGAGGAGAGAG 60.105 48.000 0.00 0.00 39.52 3.20
6368 7434 4.776308 GGTTGGGTAACTAAAGAGGAGAGA 59.224 45.833 0.00 0.00 39.52 3.10
6369 7435 4.081031 GGGTTGGGTAACTAAAGAGGAGAG 60.081 50.000 0.00 0.00 39.52 3.20
6370 7436 3.842436 GGGTTGGGTAACTAAAGAGGAGA 59.158 47.826 0.00 0.00 39.52 3.71
6371 7437 3.054582 GGGGTTGGGTAACTAAAGAGGAG 60.055 52.174 0.00 0.00 39.52 3.69
6372 7438 2.914941 GGGGTTGGGTAACTAAAGAGGA 59.085 50.000 0.00 0.00 39.52 3.71
6373 7439 2.917600 AGGGGTTGGGTAACTAAAGAGG 59.082 50.000 0.00 0.00 39.52 3.69
6374 7440 5.767277 TTAGGGGTTGGGTAACTAAAGAG 57.233 43.478 0.00 0.00 39.52 2.85
6375 7441 5.791664 TCATTAGGGGTTGGGTAACTAAAGA 59.208 40.000 0.00 0.00 39.52 2.52
6376 7442 6.069705 TCATTAGGGGTTGGGTAACTAAAG 57.930 41.667 0.00 0.00 39.52 1.85
6377 7443 5.574120 GCTCATTAGGGGTTGGGTAACTAAA 60.574 44.000 0.00 0.00 39.52 1.85
6378 7444 4.080186 GCTCATTAGGGGTTGGGTAACTAA 60.080 45.833 0.00 0.00 36.99 2.24
6379 7445 3.457012 GCTCATTAGGGGTTGGGTAACTA 59.543 47.826 0.00 0.00 36.99 2.24
6380 7446 2.241430 GCTCATTAGGGGTTGGGTAACT 59.759 50.000 0.00 0.00 36.99 2.24
6381 7447 2.241430 AGCTCATTAGGGGTTGGGTAAC 59.759 50.000 0.00 0.00 36.04 2.50
6382 7448 2.568979 AGCTCATTAGGGGTTGGGTAA 58.431 47.619 0.00 0.00 0.00 2.85
6383 7449 2.280308 AGCTCATTAGGGGTTGGGTA 57.720 50.000 0.00 0.00 0.00 3.69
6384 7450 2.280308 TAGCTCATTAGGGGTTGGGT 57.720 50.000 0.00 0.00 0.00 4.51
6385 7451 2.509964 ACTTAGCTCATTAGGGGTTGGG 59.490 50.000 0.00 0.00 0.00 4.12
6386 7452 3.545703 CACTTAGCTCATTAGGGGTTGG 58.454 50.000 0.00 0.00 0.00 3.77
6387 7453 2.945668 GCACTTAGCTCATTAGGGGTTG 59.054 50.000 0.00 0.00 41.15 3.77
6388 7454 2.576191 TGCACTTAGCTCATTAGGGGTT 59.424 45.455 0.00 0.00 45.94 4.11
6389 7455 2.196595 TGCACTTAGCTCATTAGGGGT 58.803 47.619 0.00 0.00 45.94 4.95
6390 7456 3.144506 CATGCACTTAGCTCATTAGGGG 58.855 50.000 0.00 0.00 45.94 4.79
6391 7457 3.813443 ACATGCACTTAGCTCATTAGGG 58.187 45.455 0.00 0.00 45.94 3.53
6392 7458 5.847304 TCTACATGCACTTAGCTCATTAGG 58.153 41.667 0.00 0.00 45.94 2.69
6393 7459 7.776933 TTTCTACATGCACTTAGCTCATTAG 57.223 36.000 0.00 0.00 45.94 1.73
6394 7460 8.737168 AATTTCTACATGCACTTAGCTCATTA 57.263 30.769 0.00 0.00 45.94 1.90
6395 7461 7.636150 AATTTCTACATGCACTTAGCTCATT 57.364 32.000 0.00 0.00 45.94 2.57
6396 7462 8.737168 TTAATTTCTACATGCACTTAGCTCAT 57.263 30.769 0.00 0.00 45.94 2.90
6397 7463 8.040727 TCTTAATTTCTACATGCACTTAGCTCA 58.959 33.333 0.00 0.00 45.94 4.26
6398 7464 8.425577 TCTTAATTTCTACATGCACTTAGCTC 57.574 34.615 0.00 0.00 45.94 4.09
6399 7465 8.792830 TTCTTAATTTCTACATGCACTTAGCT 57.207 30.769 0.00 0.00 45.94 3.32
6400 7466 8.883731 TCTTCTTAATTTCTACATGCACTTAGC 58.116 33.333 0.00 0.00 45.96 3.09
6402 7468 9.944376 ACTCTTCTTAATTTCTACATGCACTTA 57.056 29.630 0.00 0.00 0.00 2.24
6403 7469 8.854614 ACTCTTCTTAATTTCTACATGCACTT 57.145 30.769 0.00 0.00 0.00 3.16
6406 7472 9.890629 ACATACTCTTCTTAATTTCTACATGCA 57.109 29.630 0.00 0.00 0.00 3.96
6424 7490 9.540538 AGACCAATAGCATTCTATACATACTCT 57.459 33.333 0.00 0.00 34.53 3.24
6426 7492 9.935241 CAAGACCAATAGCATTCTATACATACT 57.065 33.333 0.00 0.00 34.53 2.12
6427 7493 9.929180 TCAAGACCAATAGCATTCTATACATAC 57.071 33.333 0.00 0.00 34.53 2.39
6432 7498 9.944376 GGTAATCAAGACCAATAGCATTCTATA 57.056 33.333 0.00 0.00 34.53 1.31
6433 7499 7.604164 CGGTAATCAAGACCAATAGCATTCTAT 59.396 37.037 0.00 0.00 36.72 1.98
6434 7500 6.929049 CGGTAATCAAGACCAATAGCATTCTA 59.071 38.462 0.00 0.00 36.72 2.10
6435 7501 5.760253 CGGTAATCAAGACCAATAGCATTCT 59.240 40.000 0.00 0.00 36.72 2.40
6436 7502 5.527582 ACGGTAATCAAGACCAATAGCATTC 59.472 40.000 0.00 0.00 36.72 2.67
6437 7503 5.296780 CACGGTAATCAAGACCAATAGCATT 59.703 40.000 0.00 0.00 36.72 3.56
6438 7504 4.816385 CACGGTAATCAAGACCAATAGCAT 59.184 41.667 0.00 0.00 36.72 3.79
6439 7505 4.188462 CACGGTAATCAAGACCAATAGCA 58.812 43.478 0.00 0.00 36.72 3.49
6440 7506 4.034048 CACACGGTAATCAAGACCAATAGC 59.966 45.833 0.00 0.00 36.72 2.97
6441 7507 5.416083 TCACACGGTAATCAAGACCAATAG 58.584 41.667 0.00 0.00 36.72 1.73
6442 7508 5.408880 TCACACGGTAATCAAGACCAATA 57.591 39.130 0.00 0.00 36.72 1.90
6443 7509 4.280436 TCACACGGTAATCAAGACCAAT 57.720 40.909 0.00 0.00 36.72 3.16
6444 7510 3.755112 TCACACGGTAATCAAGACCAA 57.245 42.857 0.00 0.00 36.72 3.67
6445 7511 3.259625 TCATCACACGGTAATCAAGACCA 59.740 43.478 0.00 0.00 36.72 4.02
6446 7512 3.857052 TCATCACACGGTAATCAAGACC 58.143 45.455 0.00 0.00 0.00 3.85
6447 7513 4.744570 TCTCATCACACGGTAATCAAGAC 58.255 43.478 0.00 0.00 0.00 3.01
6448 7514 4.705023 TCTCTCATCACACGGTAATCAAGA 59.295 41.667 0.00 0.00 0.00 3.02
6449 7515 4.998788 TCTCTCATCACACGGTAATCAAG 58.001 43.478 0.00 0.00 0.00 3.02
6450 7516 5.400066 TTCTCTCATCACACGGTAATCAA 57.600 39.130 0.00 0.00 0.00 2.57
6451 7517 5.400066 TTTCTCTCATCACACGGTAATCA 57.600 39.130 0.00 0.00 0.00 2.57
6452 7518 6.910536 ATTTTCTCTCATCACACGGTAATC 57.089 37.500 0.00 0.00 0.00 1.75
6453 7519 7.556844 AGTATTTTCTCTCATCACACGGTAAT 58.443 34.615 0.00 0.00 0.00 1.89
6454 7520 6.931838 AGTATTTTCTCTCATCACACGGTAA 58.068 36.000 0.00 0.00 0.00 2.85
6455 7521 6.525578 AGTATTTTCTCTCATCACACGGTA 57.474 37.500 0.00 0.00 0.00 4.02
6456 7522 5.407407 AGTATTTTCTCTCATCACACGGT 57.593 39.130 0.00 0.00 0.00 4.83
6457 7523 6.727824 AAAGTATTTTCTCTCATCACACGG 57.272 37.500 0.00 0.00 31.62 4.94
6458 7524 9.746711 CTTTAAAGTATTTTCTCTCATCACACG 57.253 33.333 7.07 0.00 40.09 4.49
6461 7527 9.548208 GCACTTTAAAGTATTTTCTCTCATCAC 57.452 33.333 20.15 0.00 40.09 3.06
6462 7528 9.283768 TGCACTTTAAAGTATTTTCTCTCATCA 57.716 29.630 20.15 1.46 40.09 3.07
6476 7542 9.959721 TTCTATCTTCCTAATGCACTTTAAAGT 57.040 29.630 15.22 15.22 40.60 2.66
6478 7544 9.959721 ACTTCTATCTTCCTAATGCACTTTAAA 57.040 29.630 0.00 0.00 0.00 1.52
6483 7549 9.594936 AGTATACTTCTATCTTCCTAATGCACT 57.405 33.333 0.00 0.00 0.00 4.40
6513 7579 6.940298 TGTTTGGGTTTAAAATTTGTCCACAA 59.060 30.769 0.00 0.00 0.00 3.33
6514 7580 6.472887 TGTTTGGGTTTAAAATTTGTCCACA 58.527 32.000 0.00 0.00 0.00 4.17
6515 7581 6.986904 TGTTTGGGTTTAAAATTTGTCCAC 57.013 33.333 0.00 0.00 0.00 4.02
6516 7582 8.265055 TGTATGTTTGGGTTTAAAATTTGTCCA 58.735 29.630 0.00 0.00 0.00 4.02
6517 7583 8.552865 GTGTATGTTTGGGTTTAAAATTTGTCC 58.447 33.333 0.00 0.00 0.00 4.02
6518 7584 9.320352 AGTGTATGTTTGGGTTTAAAATTTGTC 57.680 29.630 0.00 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.