Multiple sequence alignment - TraesCS3B01G072400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G072400 chr3B 100.000 2213 0 0 1 2213 43736356 43734144 0.000000e+00 4087.0
1 TraesCS3B01G072400 chr3B 94.545 110 6 0 1678 1787 449159820 449159929 1.050000e-38 171.0
2 TraesCS3B01G072400 chr3B 83.908 87 14 0 1389 1475 115226700 115226786 1.410000e-12 84.2
3 TraesCS3B01G072400 chr3D 90.525 686 52 8 634 1310 26261751 26262432 0.000000e+00 894.0
4 TraesCS3B01G072400 chr3D 82.318 837 91 29 583 1397 26210709 26209908 0.000000e+00 673.0
5 TraesCS3B01G072400 chr3D 94.672 244 6 4 1 243 26261277 26261514 2.680000e-99 372.0
6 TraesCS3B01G072400 chr3D 90.948 232 13 5 32 263 26211149 26210926 2.760000e-79 305.0
7 TraesCS3B01G072400 chr3D 95.455 132 6 0 270 401 496172885 496172754 6.190000e-51 211.0
8 TraesCS3B01G072400 chr3D 88.235 153 18 0 2061 2213 26209354 26209202 1.350000e-42 183.0
9 TraesCS3B01G072400 chr3D 78.423 241 22 11 1781 2021 26213652 26213442 1.780000e-26 130.0
10 TraesCS3B01G072400 chr3D 86.207 87 12 0 1389 1475 68899527 68899613 6.510000e-16 95.3
11 TraesCS3B01G072400 chr3A 84.561 706 72 19 583 1271 36191496 36190811 0.000000e+00 665.0
12 TraesCS3B01G072400 chr3A 94.118 238 10 3 32 269 36191930 36191697 2.090000e-95 359.0
13 TraesCS3B01G072400 chr3A 93.443 244 9 5 1 243 36228969 36228732 2.700000e-94 355.0
14 TraesCS3B01G072400 chr3A 92.157 153 12 0 554 706 36228564 36228412 1.330000e-52 217.0
15 TraesCS3B01G072400 chr3A 78.028 355 62 6 913 1265 36228228 36227888 2.230000e-50 209.0
16 TraesCS3B01G072400 chr3A 82.353 204 27 5 1818 2021 36227581 36227387 3.780000e-38 169.0
17 TraesCS3B01G072400 chr3A 81.818 209 23 5 1483 1689 36190450 36190255 6.320000e-36 161.0
18 TraesCS3B01G072400 chr3A 82.778 180 18 8 694 870 36228395 36228226 4.920000e-32 148.0
19 TraesCS3B01G072400 chr6D 95.420 131 6 0 273 403 272859228 272859358 2.230000e-50 209.0
20 TraesCS3B01G072400 chr5A 96.094 128 5 0 272 399 687680926 687681053 2.230000e-50 209.0
21 TraesCS3B01G072400 chr5A 91.837 147 11 1 269 414 481114380 481114234 1.040000e-48 204.0
22 TraesCS3B01G072400 chr4B 94.203 138 7 1 263 400 158279371 158279507 2.230000e-50 209.0
23 TraesCS3B01G072400 chr1D 95.420 131 6 0 273 403 444519423 444519293 2.230000e-50 209.0
24 TraesCS3B01G072400 chr1D 93.750 112 7 0 1678 1789 443424627 443424738 3.780000e-38 169.0
25 TraesCS3B01G072400 chr1D 82.558 86 13 2 1392 1476 348128607 348128523 8.470000e-10 75.0
26 TraesCS3B01G072400 chr4A 92.414 145 9 2 272 414 729151969 729151825 2.880000e-49 206.0
27 TraesCS3B01G072400 chr4A 92.308 143 11 0 270 412 472925984 472926126 1.040000e-48 204.0
28 TraesCS3B01G072400 chr7D 92.361 144 10 1 259 402 161488719 161488861 1.040000e-48 204.0
29 TraesCS3B01G072400 chr7B 93.913 115 7 0 1671 1785 29592145 29592259 8.120000e-40 174.0
30 TraesCS3B01G072400 chr6B 93.860 114 7 0 1678 1791 591265596 591265483 2.920000e-39 172.0
31 TraesCS3B01G072400 chr5D 93.750 112 7 0 1673 1784 135658076 135657965 3.780000e-38 169.0
32 TraesCS3B01G072400 chr7A 92.982 114 8 0 1675 1788 736421718 736421831 1.360000e-37 167.0
33 TraesCS3B01G072400 chr2B 91.736 121 8 1 1664 1784 25365973 25366091 1.360000e-37 167.0
34 TraesCS3B01G072400 chr2B 86.029 136 16 3 1658 1791 635761156 635761022 2.290000e-30 143.0
35 TraesCS3B01G072400 chr2B 86.364 88 9 3 1390 1475 529265348 529265262 2.340000e-15 93.5
36 TraesCS3B01G072400 chr1A 89.922 129 11 2 1656 1784 466345327 466345453 4.890000e-37 165.0
37 TraesCS3B01G072400 chr2A 89.313 131 11 3 1678 1808 57865391 57865518 6.320000e-36 161.0
38 TraesCS3B01G072400 chr2A 87.356 87 9 2 1390 1475 593655912 593655827 5.030000e-17 99.0
39 TraesCS3B01G072400 chr2D 85.870 92 11 2 1394 1483 572703470 572703561 1.810000e-16 97.1
40 TraesCS3B01G072400 chr2D 86.207 87 9 3 1390 1475 449065580 449065664 8.410000e-15 91.6
41 TraesCS3B01G072400 chr1B 94.737 57 2 1 1420 1475 142317655 142317599 1.090000e-13 87.9
42 TraesCS3B01G072400 chr4D 83.544 79 12 1 1392 1469 381882681 381882603 3.050000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G072400 chr3B 43734144 43736356 2212 True 4087.00 4087 100.000000 1 2213 1 chr3B.!!$R1 2212
1 TraesCS3B01G072400 chr3D 26261277 26262432 1155 False 633.00 894 92.598500 1 1310 2 chr3D.!!$F2 1309
2 TraesCS3B01G072400 chr3D 26209202 26213652 4450 True 322.75 673 84.981000 32 2213 4 chr3D.!!$R2 2181
3 TraesCS3B01G072400 chr3A 36190255 36191930 1675 True 395.00 665 86.832333 32 1689 3 chr3A.!!$R1 1657
4 TraesCS3B01G072400 chr3A 36227387 36228969 1582 True 219.60 355 85.751800 1 2021 5 chr3A.!!$R2 2020

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
975 3536 0.31716 TCCTTCTGCGCCCATATACG 59.683 55.0 4.18 0.0 0.0 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1893 4817 0.033504 TCGCACTCCTGGTCAACTTC 59.966 55.0 0.0 0.0 0.0 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
89 2564 7.645058 ATGTGTTATATTAAGCAAGCAAGGT 57.355 32.000 0.00 0.00 0.00 3.50
110 2585 6.184068 AGGTCAGACGACAGATATATATGCT 58.816 40.000 7.26 0.00 44.54 3.79
263 2738 1.211457 GGATGATGCTTGAGGTGGACT 59.789 52.381 0.00 0.00 0.00 3.85
265 2740 3.118261 GGATGATGCTTGAGGTGGACTAA 60.118 47.826 0.00 0.00 0.00 2.24
269 2744 4.019411 TGATGCTTGAGGTGGACTAATTCA 60.019 41.667 0.00 0.00 0.00 2.57
270 2745 3.942829 TGCTTGAGGTGGACTAATTCAG 58.057 45.455 0.00 0.00 0.00 3.02
271 2746 3.582647 TGCTTGAGGTGGACTAATTCAGA 59.417 43.478 0.00 0.00 0.00 3.27
272 2747 4.225942 TGCTTGAGGTGGACTAATTCAGAT 59.774 41.667 0.00 0.00 0.00 2.90
273 2748 5.425217 TGCTTGAGGTGGACTAATTCAGATA 59.575 40.000 0.00 0.00 0.00 1.98
274 2749 5.755861 GCTTGAGGTGGACTAATTCAGATAC 59.244 44.000 0.00 0.00 0.00 2.24
276 2751 6.716934 TGAGGTGGACTAATTCAGATACTC 57.283 41.667 0.00 0.00 0.00 2.59
278 2753 4.902448 AGGTGGACTAATTCAGATACTCCC 59.098 45.833 0.00 0.00 0.00 4.30
279 2754 4.902448 GGTGGACTAATTCAGATACTCCCT 59.098 45.833 0.00 0.00 0.00 4.20
280 2755 5.367060 GGTGGACTAATTCAGATACTCCCTT 59.633 44.000 0.00 0.00 0.00 3.95
281 2756 6.126739 GGTGGACTAATTCAGATACTCCCTTT 60.127 42.308 0.00 0.00 0.00 3.11
282 2757 6.763610 GTGGACTAATTCAGATACTCCCTTTG 59.236 42.308 0.00 0.00 0.00 2.77
283 2758 6.443849 TGGACTAATTCAGATACTCCCTTTGT 59.556 38.462 0.00 0.00 0.00 2.83
284 2759 6.987404 GGACTAATTCAGATACTCCCTTTGTC 59.013 42.308 0.00 0.00 0.00 3.18
285 2760 6.890293 ACTAATTCAGATACTCCCTTTGTCC 58.110 40.000 0.00 0.00 0.00 4.02
286 2761 6.674419 ACTAATTCAGATACTCCCTTTGTCCT 59.326 38.462 0.00 0.00 0.00 3.85
287 2762 7.844779 ACTAATTCAGATACTCCCTTTGTCCTA 59.155 37.037 0.00 0.00 0.00 2.94
288 2763 7.510675 AATTCAGATACTCCCTTTGTCCTAA 57.489 36.000 0.00 0.00 0.00 2.69
289 2764 6.945636 TTCAGATACTCCCTTTGTCCTAAA 57.054 37.500 0.00 0.00 0.00 1.85
290 2765 6.945636 TCAGATACTCCCTTTGTCCTAAAA 57.054 37.500 0.00 0.00 0.00 1.52
291 2766 7.510675 TCAGATACTCCCTTTGTCCTAAAAT 57.489 36.000 0.00 0.00 0.00 1.82
292 2767 7.928873 TCAGATACTCCCTTTGTCCTAAAATT 58.071 34.615 0.00 0.00 0.00 1.82
293 2768 8.047310 TCAGATACTCCCTTTGTCCTAAAATTC 58.953 37.037 0.00 0.00 0.00 2.17
294 2769 8.049721 CAGATACTCCCTTTGTCCTAAAATTCT 58.950 37.037 0.00 0.00 0.00 2.40
295 2770 8.615705 AGATACTCCCTTTGTCCTAAAATTCTT 58.384 33.333 0.00 0.00 0.00 2.52
296 2771 6.901081 ACTCCCTTTGTCCTAAAATTCTTG 57.099 37.500 0.00 0.00 0.00 3.02
297 2772 6.373759 ACTCCCTTTGTCCTAAAATTCTTGT 58.626 36.000 0.00 0.00 0.00 3.16
298 2773 6.490381 ACTCCCTTTGTCCTAAAATTCTTGTC 59.510 38.462 0.00 0.00 0.00 3.18
299 2774 6.610830 TCCCTTTGTCCTAAAATTCTTGTCT 58.389 36.000 0.00 0.00 0.00 3.41
300 2775 7.066781 TCCCTTTGTCCTAAAATTCTTGTCTT 58.933 34.615 0.00 0.00 0.00 3.01
301 2776 8.221944 TCCCTTTGTCCTAAAATTCTTGTCTTA 58.778 33.333 0.00 0.00 0.00 2.10
302 2777 8.515414 CCCTTTGTCCTAAAATTCTTGTCTTAG 58.485 37.037 0.00 0.00 0.00 2.18
303 2778 9.284968 CCTTTGTCCTAAAATTCTTGTCTTAGA 57.715 33.333 0.00 0.00 0.00 2.10
318 2793 9.582431 TCTTGTCTTAGATTTGTCTAAATACGG 57.418 33.333 0.26 0.99 36.66 4.02
319 2794 9.582431 CTTGTCTTAGATTTGTCTAAATACGGA 57.418 33.333 0.26 0.00 36.66 4.69
321 2796 9.529325 TGTCTTAGATTTGTCTAAATACGGATG 57.471 33.333 0.26 0.00 36.66 3.51
322 2797 9.530633 GTCTTAGATTTGTCTAAATACGGATGT 57.469 33.333 0.26 0.00 36.66 3.06
329 2804 9.832445 ATTTGTCTAAATACGGATGTATCAAGT 57.168 29.630 0.00 0.00 40.42 3.16
330 2805 8.867112 TTGTCTAAATACGGATGTATCAAGTC 57.133 34.615 0.00 0.00 40.42 3.01
331 2806 8.002984 TGTCTAAATACGGATGTATCAAGTCA 57.997 34.615 0.00 0.00 40.42 3.41
332 2807 7.919091 TGTCTAAATACGGATGTATCAAGTCAC 59.081 37.037 0.00 0.00 40.42 3.67
333 2808 7.113124 GTCTAAATACGGATGTATCAAGTCACG 59.887 40.741 0.00 0.00 40.42 4.35
334 2809 4.913335 ATACGGATGTATCAAGTCACGT 57.087 40.909 0.00 0.00 36.56 4.49
335 2810 3.587797 ACGGATGTATCAAGTCACGTT 57.412 42.857 0.00 0.00 0.00 3.99
336 2811 3.921677 ACGGATGTATCAAGTCACGTTT 58.078 40.909 0.00 0.00 0.00 3.60
337 2812 3.678072 ACGGATGTATCAAGTCACGTTTG 59.322 43.478 0.00 0.00 0.00 2.93
338 2813 3.924073 CGGATGTATCAAGTCACGTTTGA 59.076 43.478 3.78 3.78 38.76 2.69
339 2814 4.031765 CGGATGTATCAAGTCACGTTTGAG 59.968 45.833 7.21 0.00 37.91 3.02
340 2815 4.929808 GGATGTATCAAGTCACGTTTGAGT 59.070 41.667 7.21 0.00 37.91 3.41
341 2816 6.097356 GGATGTATCAAGTCACGTTTGAGTA 58.903 40.000 7.21 0.00 37.91 2.59
342 2817 6.757010 GGATGTATCAAGTCACGTTTGAGTAT 59.243 38.462 7.21 2.27 37.91 2.12
343 2818 7.277981 GGATGTATCAAGTCACGTTTGAGTATT 59.722 37.037 7.21 0.00 37.91 1.89
344 2819 9.297586 GATGTATCAAGTCACGTTTGAGTATTA 57.702 33.333 7.21 0.00 37.91 0.98
345 2820 8.683550 TGTATCAAGTCACGTTTGAGTATTAG 57.316 34.615 7.21 0.00 37.91 1.73
346 2821 8.517056 TGTATCAAGTCACGTTTGAGTATTAGA 58.483 33.333 7.21 0.00 37.91 2.10
347 2822 9.517609 GTATCAAGTCACGTTTGAGTATTAGAT 57.482 33.333 7.21 2.11 37.91 1.98
349 2824 8.906636 TCAAGTCACGTTTGAGTATTAGATAC 57.093 34.615 0.00 0.00 33.98 2.24
350 2825 8.517056 TCAAGTCACGTTTGAGTATTAGATACA 58.483 33.333 0.00 0.00 38.21 2.29
351 2826 9.302345 CAAGTCACGTTTGAGTATTAGATACAT 57.698 33.333 0.00 0.00 38.21 2.29
352 2827 9.517609 AAGTCACGTTTGAGTATTAGATACATC 57.482 33.333 0.00 0.00 38.21 3.06
353 2828 8.136165 AGTCACGTTTGAGTATTAGATACATCC 58.864 37.037 0.00 0.00 38.21 3.51
354 2829 7.919091 GTCACGTTTGAGTATTAGATACATCCA 59.081 37.037 0.00 0.00 38.21 3.41
355 2830 8.638873 TCACGTTTGAGTATTAGATACATCCAT 58.361 33.333 0.00 0.00 38.21 3.41
356 2831 9.908152 CACGTTTGAGTATTAGATACATCCATA 57.092 33.333 0.00 0.00 38.21 2.74
369 2844 8.621126 AGATACATCCATATCTAGGCAAATCT 57.379 34.615 0.00 0.00 39.63 2.40
370 2845 9.720874 AGATACATCCATATCTAGGCAAATCTA 57.279 33.333 0.00 0.00 39.63 1.98
373 2848 8.441311 ACATCCATATCTAGGCAAATCTAAGA 57.559 34.615 0.00 0.00 0.00 2.10
374 2849 8.317679 ACATCCATATCTAGGCAAATCTAAGAC 58.682 37.037 0.00 0.00 0.00 3.01
375 2850 7.855784 TCCATATCTAGGCAAATCTAAGACA 57.144 36.000 0.00 0.00 0.00 3.41
376 2851 8.262601 TCCATATCTAGGCAAATCTAAGACAA 57.737 34.615 0.00 0.00 0.00 3.18
377 2852 8.370940 TCCATATCTAGGCAAATCTAAGACAAG 58.629 37.037 0.00 0.00 0.00 3.16
378 2853 8.370940 CCATATCTAGGCAAATCTAAGACAAGA 58.629 37.037 0.00 0.00 0.00 3.02
379 2854 9.770097 CATATCTAGGCAAATCTAAGACAAGAA 57.230 33.333 0.00 0.00 0.00 2.52
382 2857 9.692325 ATCTAGGCAAATCTAAGACAAGAATTT 57.308 29.630 0.00 0.00 0.00 1.82
383 2858 9.520515 TCTAGGCAAATCTAAGACAAGAATTTT 57.479 29.630 0.00 0.00 0.00 1.82
384 2859 9.565213 CTAGGCAAATCTAAGACAAGAATTTTG 57.435 33.333 0.00 0.00 32.40 2.44
385 2860 7.381323 AGGCAAATCTAAGACAAGAATTTTGG 58.619 34.615 0.00 0.00 30.97 3.28
386 2861 6.591448 GGCAAATCTAAGACAAGAATTTTGGG 59.409 38.462 0.00 0.00 30.97 4.12
387 2862 7.378181 GCAAATCTAAGACAAGAATTTTGGGA 58.622 34.615 0.00 0.00 30.97 4.37
388 2863 7.329471 GCAAATCTAAGACAAGAATTTTGGGAC 59.671 37.037 0.00 0.00 30.97 4.46
389 2864 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
390 2865 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
391 2866 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
392 2867 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
393 2868 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
394 2869 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
395 2870 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
396 2871 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
414 2889 3.519913 GGGAGTACTTGAGAAGGATGGTT 59.480 47.826 0.00 0.00 0.00 3.67
419 2894 5.785940 AGTACTTGAGAAGGATGGTTTACCT 59.214 40.000 0.00 0.00 38.23 3.08
425 2900 4.848357 AGAAGGATGGTTTACCTGACATG 58.152 43.478 0.00 0.00 36.56 3.21
428 2907 2.025321 GGATGGTTTACCTGACATGGGT 60.025 50.000 0.00 0.00 40.53 4.51
431 2910 3.917300 TGGTTTACCTGACATGGGTTTT 58.083 40.909 0.00 0.00 38.19 2.43
432 2911 5.063017 TGGTTTACCTGACATGGGTTTTA 57.937 39.130 0.00 0.00 38.19 1.52
433 2912 5.455872 TGGTTTACCTGACATGGGTTTTAA 58.544 37.500 0.00 0.00 38.19 1.52
434 2913 5.536916 TGGTTTACCTGACATGGGTTTTAAG 59.463 40.000 0.00 0.00 38.19 1.85
435 2914 5.466819 GTTTACCTGACATGGGTTTTAAGC 58.533 41.667 0.00 0.00 38.19 3.09
436 2915 2.159382 ACCTGACATGGGTTTTAAGCG 58.841 47.619 0.00 0.00 32.46 4.68
437 2916 2.159382 CCTGACATGGGTTTTAAGCGT 58.841 47.619 0.00 0.00 0.00 5.07
441 2920 4.839121 TGACATGGGTTTTAAGCGTAGAT 58.161 39.130 0.00 0.00 0.00 1.98
446 2928 7.732996 ACATGGGTTTTAAGCGTAGATATACT 58.267 34.615 0.00 0.00 0.00 2.12
447 2933 7.871463 ACATGGGTTTTAAGCGTAGATATACTC 59.129 37.037 0.00 0.00 0.00 2.59
448 2934 7.592885 TGGGTTTTAAGCGTAGATATACTCT 57.407 36.000 0.00 0.00 38.06 3.24
449 2935 8.696043 TGGGTTTTAAGCGTAGATATACTCTA 57.304 34.615 0.00 0.00 35.28 2.43
450 2936 8.790718 TGGGTTTTAAGCGTAGATATACTCTAG 58.209 37.037 0.00 0.00 37.14 2.43
464 2950 9.935241 AGATATACTCTAGTATGTTTGCAATGG 57.065 33.333 11.99 0.00 41.03 3.16
465 2951 6.867662 ATACTCTAGTATGTTTGCAATGGC 57.132 37.500 0.00 0.00 39.57 4.40
478 2965 3.221964 GCAATGGCAGGTTTAGTTGAG 57.778 47.619 0.00 0.00 40.72 3.02
485 2972 3.369576 GGCAGGTTTAGTTGAGGTCCTAG 60.370 52.174 0.00 0.00 0.00 3.02
497 2984 3.646162 TGAGGTCCTAGTTTGAAGCTTCA 59.354 43.478 25.16 25.16 34.92 3.02
516 3021 5.106673 GCTTCACTAACAACAGTGGATAACC 60.107 44.000 3.61 0.00 44.98 2.85
543 3051 6.013379 ACCCCATTATACTATGTCATGAGGTG 60.013 42.308 0.00 0.00 0.00 4.00
544 3052 6.213397 CCCCATTATACTATGTCATGAGGTGA 59.787 42.308 0.00 0.00 0.00 4.02
545 3053 7.326454 CCCATTATACTATGTCATGAGGTGAG 58.674 42.308 0.00 0.00 37.56 3.51
546 3054 7.326454 CCATTATACTATGTCATGAGGTGAGG 58.674 42.308 0.00 0.00 37.56 3.86
547 3055 7.038729 CCATTATACTATGTCATGAGGTGAGGT 60.039 40.741 0.00 0.00 37.56 3.85
548 3056 9.025041 CATTATACTATGTCATGAGGTGAGGTA 57.975 37.037 0.00 0.00 37.56 3.08
549 3057 9.601810 ATTATACTATGTCATGAGGTGAGGTAA 57.398 33.333 0.00 0.00 37.56 2.85
550 3058 5.860941 ACTATGTCATGAGGTGAGGTAAG 57.139 43.478 0.00 0.00 37.56 2.34
551 3059 5.519808 ACTATGTCATGAGGTGAGGTAAGA 58.480 41.667 0.00 0.00 37.56 2.10
552 3060 6.139671 ACTATGTCATGAGGTGAGGTAAGAT 58.860 40.000 0.00 0.00 37.56 2.40
553 3061 4.743057 TGTCATGAGGTGAGGTAAGATG 57.257 45.455 0.00 0.00 37.56 2.90
554 3062 4.096681 TGTCATGAGGTGAGGTAAGATGT 58.903 43.478 0.00 0.00 37.56 3.06
559 3067 4.942944 TGAGGTGAGGTAAGATGTCCTTA 58.057 43.478 0.00 0.00 36.34 2.69
567 3075 7.117956 GTGAGGTAAGATGTCCTTAGTTTTCAC 59.882 40.741 0.00 0.00 37.98 3.18
568 3076 6.164176 AGGTAAGATGTCCTTAGTTTTCACG 58.836 40.000 0.00 0.00 37.98 4.35
572 3080 2.920524 TGTCCTTAGTTTTCACGCCAA 58.079 42.857 0.00 0.00 0.00 4.52
575 3083 5.064558 TGTCCTTAGTTTTCACGCCAAATA 58.935 37.500 0.00 0.00 0.00 1.40
581 3089 5.046910 AGTTTTCACGCCAAATATCTGTG 57.953 39.130 0.00 0.00 0.00 3.66
640 3152 5.750067 CCAGAACCAACAGATTTGTTCTTTG 59.250 40.000 0.00 0.00 44.40 2.77
654 3166 7.636259 TTTGTTCTTTGTTTGTTCTTGTGAG 57.364 32.000 0.00 0.00 0.00 3.51
830 3381 3.200825 TCCTCCTCTCATTGACCATTTCC 59.799 47.826 0.00 0.00 0.00 3.13
975 3536 0.317160 TCCTTCTGCGCCCATATACG 59.683 55.000 4.18 0.00 0.00 3.06
993 3554 8.504005 CCATATACGAGAAGAAAAACAAACACT 58.496 33.333 0.00 0.00 0.00 3.55
1050 3611 0.319040 CCATCATCCTCCACTACGCG 60.319 60.000 3.53 3.53 0.00 6.01
1094 3658 0.903454 GGAGACAACCCCTTCCTCGA 60.903 60.000 0.00 0.00 0.00 4.04
1096 3660 1.080025 GACAACCCCTTCCTCGACG 60.080 63.158 0.00 0.00 0.00 5.12
1138 3702 1.208052 AGTACTACTACGTCCGCCTCA 59.792 52.381 0.00 0.00 0.00 3.86
1140 3704 0.035630 ACTACTACGTCCGCCTCACT 60.036 55.000 0.00 0.00 0.00 3.41
1158 3722 4.459089 GGCAGCCCTGACGACTCC 62.459 72.222 0.00 0.00 0.00 3.85
1159 3723 3.695606 GCAGCCCTGACGACTCCA 61.696 66.667 0.00 0.00 0.00 3.86
1161 3725 2.118513 AGCCCTGACGACTCCAGT 59.881 61.111 0.00 0.00 0.00 4.00
1163 3727 2.276116 GCCCTGACGACTCCAGTCA 61.276 63.158 7.48 0.00 44.99 3.41
1164 3728 1.816863 GCCCTGACGACTCCAGTCAA 61.817 60.000 7.48 0.00 46.43 3.18
1167 3731 2.160205 CCTGACGACTCCAGTCAACTA 58.840 52.381 7.48 0.00 46.43 2.24
1168 3732 2.162608 CCTGACGACTCCAGTCAACTAG 59.837 54.545 7.48 0.00 46.43 2.57
1173 3737 2.299297 CGACTCCAGTCAACTAGGGTTT 59.701 50.000 7.48 0.00 44.99 3.27
1177 3741 1.156736 CAGTCAACTAGGGTTTGCCG 58.843 55.000 0.00 0.00 32.73 5.69
1217 3784 2.202797 CGCGGTCCTGTGATGGAG 60.203 66.667 0.00 0.00 36.69 3.86
1223 3790 3.181469 GCGGTCCTGTGATGGAGTTAATA 60.181 47.826 0.00 0.00 36.69 0.98
1234 3801 8.031277 TGTGATGGAGTTAATAGATCATCATCG 58.969 37.037 0.00 0.00 41.59 3.84
1261 3829 2.479275 CGTTTCCGGGTCTTTCTTCTTC 59.521 50.000 0.00 0.00 0.00 2.87
1262 3830 3.741249 GTTTCCGGGTCTTTCTTCTTCT 58.259 45.455 0.00 0.00 0.00 2.85
1272 3840 6.995686 GGGTCTTTCTTCTTCTTCTTCTTCTT 59.004 38.462 0.00 0.00 0.00 2.52
1273 3841 7.172532 GGGTCTTTCTTCTTCTTCTTCTTCTTC 59.827 40.741 0.00 0.00 0.00 2.87
1276 3847 9.541143 TCTTTCTTCTTCTTCTTCTTCTTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
1280 3851 8.700051 TCTTCTTCTTCTTCTTCTTCTTCTTGA 58.300 33.333 0.00 0.00 0.00 3.02
1310 3889 1.131638 TGGTATGGATGACCTCTGGC 58.868 55.000 0.00 0.00 37.88 4.85
1326 3905 0.844661 TGGCCCTCTGGGTGTTGTAT 60.845 55.000 0.00 0.00 46.51 2.29
1336 4147 4.158394 TCTGGGTGTTGTATAGTACGGTTC 59.842 45.833 0.00 0.00 0.00 3.62
1345 4156 6.832520 TGTATAGTACGGTTCTGTGGTTTA 57.167 37.500 0.00 0.00 0.00 2.01
1346 4157 6.855836 TGTATAGTACGGTTCTGTGGTTTAG 58.144 40.000 0.00 0.00 0.00 1.85
1426 4348 9.832445 TGTACCAAAATATAAAAGGTTTTTGCA 57.168 25.926 0.00 0.00 37.60 4.08
1428 4350 8.972458 ACCAAAATATAAAAGGTTTTTGCAGT 57.028 26.923 0.00 0.00 37.60 4.40
1429 4351 9.402320 ACCAAAATATAAAAGGTTTTTGCAGTT 57.598 25.926 0.00 0.00 37.60 3.16
1439 4361 9.619316 AAAAGGTTTTTGCAGTTTAAATTGAAC 57.381 25.926 14.30 9.04 0.00 3.18
1440 4362 8.560355 AAGGTTTTTGCAGTTTAAATTGAACT 57.440 26.923 14.30 0.00 37.82 3.01
1449 4371 6.988329 CAGTTTAAATTGAACTGCAAAACGT 58.012 32.000 15.89 0.00 45.02 3.99
1450 4372 7.110511 CAGTTTAAATTGAACTGCAAAACGTC 58.889 34.615 15.89 0.00 45.02 4.34
1451 4373 7.009174 CAGTTTAAATTGAACTGCAAAACGTCT 59.991 33.333 15.89 0.00 45.02 4.18
1452 4374 7.544217 AGTTTAAATTGAACTGCAAAACGTCTT 59.456 29.630 2.22 0.00 40.48 3.01
1453 4375 8.800031 GTTTAAATTGAACTGCAAAACGTCTTA 58.200 29.630 0.00 0.00 40.48 2.10
1454 4376 9.522804 TTTAAATTGAACTGCAAAACGTCTTAT 57.477 25.926 0.00 0.00 40.48 1.73
1457 4379 9.691362 AAATTGAACTGCAAAACGTCTTATATT 57.309 25.926 0.00 0.00 40.48 1.28
1458 4380 9.691362 AATTGAACTGCAAAACGTCTTATATTT 57.309 25.926 0.00 0.00 40.48 1.40
1459 4381 9.691362 ATTGAACTGCAAAACGTCTTATATTTT 57.309 25.926 0.00 0.00 40.48 1.82
1460 4382 8.500837 TGAACTGCAAAACGTCTTATATTTTG 57.499 30.769 0.00 0.00 43.20 2.44
1461 4383 7.593273 TGAACTGCAAAACGTCTTATATTTTGG 59.407 33.333 9.88 0.00 41.51 3.28
1462 4384 6.977213 ACTGCAAAACGTCTTATATTTTGGT 58.023 32.000 9.88 0.00 41.51 3.67
1463 4385 8.101654 ACTGCAAAACGTCTTATATTTTGGTA 57.898 30.769 9.88 0.00 41.51 3.25
1464 4386 8.736244 ACTGCAAAACGTCTTATATTTTGGTAT 58.264 29.630 9.88 0.00 41.51 2.73
1470 4392 9.774413 AAACGTCTTATATTTTGGTATAGAGGG 57.226 33.333 0.00 0.00 0.00 4.30
1471 4393 8.716674 ACGTCTTATATTTTGGTATAGAGGGA 57.283 34.615 0.00 0.00 0.00 4.20
1472 4394 8.804204 ACGTCTTATATTTTGGTATAGAGGGAG 58.196 37.037 0.00 0.00 0.00 4.30
1473 4395 8.804204 CGTCTTATATTTTGGTATAGAGGGAGT 58.196 37.037 0.00 0.00 0.00 3.85
1477 4399 9.592196 TTATATTTTGGTATAGAGGGAGTACGT 57.408 33.333 0.00 0.00 0.00 3.57
1478 4400 6.803366 ATTTTGGTATAGAGGGAGTACGTT 57.197 37.500 0.00 0.00 0.00 3.99
1492 4414 7.487484 AGGGAGTACGTTTAGTTAAATAGAGC 58.513 38.462 0.00 0.00 0.00 4.09
1528 4450 2.288825 TGTGGTCACCTCGAGATTTCAC 60.289 50.000 15.71 14.84 0.00 3.18
1538 4460 3.673902 TCGAGATTTCACTGATTTGGCA 58.326 40.909 0.00 0.00 0.00 4.92
1598 4520 7.667043 ATTTCTTACATTTTCGTCAGTAGCA 57.333 32.000 0.00 0.00 0.00 3.49
1601 4523 6.163476 TCTTACATTTTCGTCAGTAGCATGT 58.837 36.000 0.00 0.00 0.00 3.21
1604 4526 6.349973 ACATTTTCGTCAGTAGCATGTATG 57.650 37.500 0.00 0.00 0.00 2.39
1664 4588 9.214953 GAACACTCAATTTCGTCATAATGAATC 57.785 33.333 0.00 0.00 30.61 2.52
1668 4592 8.960591 ACTCAATTTCGTCATAATGAATCCTTT 58.039 29.630 0.00 0.00 30.61 3.11
1672 4596 9.736023 AATTTCGTCATAATGAATCCTTTAAGC 57.264 29.630 0.00 0.00 30.61 3.09
1675 4599 8.506168 TCGTCATAATGAATCCTTTAAGCTTT 57.494 30.769 3.20 0.00 0.00 3.51
1676 4600 8.612619 TCGTCATAATGAATCCTTTAAGCTTTC 58.387 33.333 3.20 0.00 0.00 2.62
1677 4601 8.616076 CGTCATAATGAATCCTTTAAGCTTTCT 58.384 33.333 3.20 0.00 0.00 2.52
1682 4606 8.512966 AATGAATCCTTTAAGCTTTCTACTCC 57.487 34.615 3.20 0.00 0.00 3.85
1683 4607 6.415573 TGAATCCTTTAAGCTTTCTACTCCC 58.584 40.000 3.20 0.00 0.00 4.30
1684 4608 6.215636 TGAATCCTTTAAGCTTTCTACTCCCT 59.784 38.462 3.20 0.00 0.00 4.20
1685 4609 5.678955 TCCTTTAAGCTTTCTACTCCCTC 57.321 43.478 3.20 0.00 0.00 4.30
1686 4610 4.470304 TCCTTTAAGCTTTCTACTCCCTCC 59.530 45.833 3.20 0.00 0.00 4.30
1687 4611 4.434520 CTTTAAGCTTTCTACTCCCTCCG 58.565 47.826 3.20 0.00 0.00 4.63
1688 4612 1.939980 AAGCTTTCTACTCCCTCCGT 58.060 50.000 0.00 0.00 0.00 4.69
1689 4613 1.476477 AGCTTTCTACTCCCTCCGTC 58.524 55.000 0.00 0.00 0.00 4.79
1690 4614 0.460722 GCTTTCTACTCCCTCCGTCC 59.539 60.000 0.00 0.00 0.00 4.79
1691 4615 0.739561 CTTTCTACTCCCTCCGTCCG 59.260 60.000 0.00 0.00 0.00 4.79
1692 4616 0.682209 TTTCTACTCCCTCCGTCCGG 60.682 60.000 0.00 0.00 0.00 5.14
1693 4617 1.565390 TTCTACTCCCTCCGTCCGGA 61.565 60.000 0.00 0.00 42.90 5.14
1694 4618 1.077212 CTACTCCCTCCGTCCGGAA 60.077 63.158 5.23 0.00 44.66 4.30
1695 4619 0.467659 CTACTCCCTCCGTCCGGAAT 60.468 60.000 5.23 0.00 44.66 3.01
1696 4620 0.032813 TACTCCCTCCGTCCGGAATT 60.033 55.000 5.23 0.00 44.66 2.17
1697 4621 0.032813 ACTCCCTCCGTCCGGAATTA 60.033 55.000 5.23 0.00 44.66 1.40
1698 4622 0.388294 CTCCCTCCGTCCGGAATTAC 59.612 60.000 5.23 0.00 44.66 1.89
1699 4623 0.032813 TCCCTCCGTCCGGAATTACT 60.033 55.000 5.23 0.00 44.66 2.24
1700 4624 0.828677 CCCTCCGTCCGGAATTACTT 59.171 55.000 5.23 0.00 44.66 2.24
1701 4625 1.472728 CCCTCCGTCCGGAATTACTTG 60.473 57.143 5.23 0.00 44.66 3.16
1702 4626 1.206371 CCTCCGTCCGGAATTACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
1703 4627 2.537401 CTCCGTCCGGAATTACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
1704 4628 1.135315 TCCGTCCGGAATTACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
1705 4629 0.643820 CGTCCGGAATTACTTGTCGC 59.356 55.000 5.23 0.00 0.00 5.19
1706 4630 1.717194 GTCCGGAATTACTTGTCGCA 58.283 50.000 5.23 0.00 0.00 5.10
1707 4631 2.070783 GTCCGGAATTACTTGTCGCAA 58.929 47.619 5.23 0.00 0.00 4.85
1708 4632 2.481185 GTCCGGAATTACTTGTCGCAAA 59.519 45.455 5.23 0.00 0.00 3.68
1709 4633 3.058777 GTCCGGAATTACTTGTCGCAAAA 60.059 43.478 5.23 0.00 0.00 2.44
1710 4634 3.564644 TCCGGAATTACTTGTCGCAAAAA 59.435 39.130 0.00 0.00 0.00 1.94
1711 4635 4.216687 TCCGGAATTACTTGTCGCAAAAAT 59.783 37.500 0.00 0.00 0.00 1.82
1712 4636 4.323336 CCGGAATTACTTGTCGCAAAAATG 59.677 41.667 0.00 0.00 0.00 2.32
1713 4637 5.150683 CGGAATTACTTGTCGCAAAAATGA 58.849 37.500 0.00 0.00 0.00 2.57
1714 4638 5.627367 CGGAATTACTTGTCGCAAAAATGAA 59.373 36.000 0.00 0.00 0.00 2.57
1715 4639 6.307800 CGGAATTACTTGTCGCAAAAATGAAT 59.692 34.615 0.00 0.00 0.00 2.57
1716 4640 7.447430 GGAATTACTTGTCGCAAAAATGAATG 58.553 34.615 0.00 0.00 0.00 2.67
1717 4641 7.116233 GGAATTACTTGTCGCAAAAATGAATGT 59.884 33.333 0.00 0.00 0.00 2.71
1718 4642 9.123709 GAATTACTTGTCGCAAAAATGAATGTA 57.876 29.630 0.00 0.00 0.00 2.29
1719 4643 9.638239 AATTACTTGTCGCAAAAATGAATGTAT 57.362 25.926 0.00 0.00 0.00 2.29
1720 4644 8.667987 TTACTTGTCGCAAAAATGAATGTATC 57.332 30.769 0.00 0.00 0.00 2.24
1721 4645 6.913170 ACTTGTCGCAAAAATGAATGTATCT 58.087 32.000 0.00 0.00 0.00 1.98
1722 4646 8.039603 ACTTGTCGCAAAAATGAATGTATCTA 57.960 30.769 0.00 0.00 0.00 1.98
1723 4647 8.177663 ACTTGTCGCAAAAATGAATGTATCTAG 58.822 33.333 0.00 0.00 0.00 2.43
1724 4648 7.841915 TGTCGCAAAAATGAATGTATCTAGA 57.158 32.000 0.00 0.00 0.00 2.43
1725 4649 8.262715 TGTCGCAAAAATGAATGTATCTAGAA 57.737 30.769 0.00 0.00 0.00 2.10
1726 4650 8.175069 TGTCGCAAAAATGAATGTATCTAGAAC 58.825 33.333 0.00 0.00 0.00 3.01
1727 4651 8.391106 GTCGCAAAAATGAATGTATCTAGAACT 58.609 33.333 0.00 0.00 0.00 3.01
1728 4652 9.594478 TCGCAAAAATGAATGTATCTAGAACTA 57.406 29.630 0.00 0.00 0.00 2.24
1756 4680 9.828852 AATACGTCTAGATACATCGATTTCTTC 57.171 33.333 6.69 0.00 0.00 2.87
1757 4681 7.260558 ACGTCTAGATACATCGATTTCTTCA 57.739 36.000 6.69 0.00 0.00 3.02
1758 4682 7.704271 ACGTCTAGATACATCGATTTCTTCAA 58.296 34.615 6.69 0.00 0.00 2.69
1759 4683 7.644551 ACGTCTAGATACATCGATTTCTTCAAC 59.355 37.037 6.69 0.00 0.00 3.18
1760 4684 7.644157 CGTCTAGATACATCGATTTCTTCAACA 59.356 37.037 0.00 0.00 0.00 3.33
1761 4685 9.302345 GTCTAGATACATCGATTTCTTCAACAA 57.698 33.333 0.00 0.00 0.00 2.83
1762 4686 9.521503 TCTAGATACATCGATTTCTTCAACAAG 57.478 33.333 0.00 0.00 0.00 3.16
1763 4687 9.307121 CTAGATACATCGATTTCTTCAACAAGT 57.693 33.333 0.00 0.00 0.00 3.16
1765 4689 9.653287 AGATACATCGATTTCTTCAACAAGTAA 57.347 29.630 0.00 0.00 0.00 2.24
1769 4693 8.237267 ACATCGATTTCTTCAACAAGTAATTCC 58.763 33.333 0.00 0.00 31.62 3.01
1770 4694 6.827641 TCGATTTCTTCAACAAGTAATTCCG 58.172 36.000 0.00 0.00 31.62 4.30
1771 4695 6.647481 TCGATTTCTTCAACAAGTAATTCCGA 59.353 34.615 0.00 0.00 31.62 4.55
1772 4696 7.171848 TCGATTTCTTCAACAAGTAATTCCGAA 59.828 33.333 0.00 0.00 31.62 4.30
1773 4697 7.268447 CGATTTCTTCAACAAGTAATTCCGAAC 59.732 37.037 0.00 0.00 31.62 3.95
1774 4698 5.585500 TCTTCAACAAGTAATTCCGAACG 57.415 39.130 0.00 0.00 0.00 3.95
1775 4699 4.449743 TCTTCAACAAGTAATTCCGAACGG 59.550 41.667 6.94 6.94 0.00 4.44
1776 4700 3.992643 TCAACAAGTAATTCCGAACGGA 58.007 40.909 12.04 12.04 43.52 4.69
1777 4701 3.991773 TCAACAAGTAATTCCGAACGGAG 59.008 43.478 15.34 5.60 46.06 4.63
1778 4702 2.968675 ACAAGTAATTCCGAACGGAGG 58.031 47.619 15.34 4.52 46.06 4.30
1779 4703 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
1780 4704 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
1781 4705 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
1816 4740 9.672673 ATTTACATGATCTACATAATAGTGCCC 57.327 33.333 0.00 0.00 37.46 5.36
1829 4753 5.972107 AATAGTGCCCATCTGCATAATTC 57.028 39.130 0.00 0.00 44.30 2.17
1850 4774 3.258372 TCACACGATTTCTAGGCTGAACT 59.742 43.478 0.00 0.00 0.00 3.01
1868 4792 2.817665 ACTGTCTTCACCCTACCCTAC 58.182 52.381 0.00 0.00 0.00 3.18
1873 4797 4.412858 TGTCTTCACCCTACCCTACAAAAA 59.587 41.667 0.00 0.00 0.00 1.94
1877 4801 2.817844 CACCCTACCCTACAAAAAGCAC 59.182 50.000 0.00 0.00 0.00 4.40
1892 4816 6.426328 ACAAAAAGCACACTGAAAATGTTTGA 59.574 30.769 0.00 0.00 0.00 2.69
1893 4817 6.651755 AAAAGCACACTGAAAATGTTTGAG 57.348 33.333 0.00 0.00 0.00 3.02
1924 4848 2.961526 GAGTGCGATTTACTCCTCCA 57.038 50.000 0.00 0.00 38.85 3.86
1926 4850 1.135083 AGTGCGATTTACTCCTCCACG 60.135 52.381 0.00 0.00 0.00 4.94
1946 4870 1.981533 GCAAAGAAGCGCAAGATGTTC 59.018 47.619 11.47 3.00 43.02 3.18
1955 4879 2.032178 GCGCAAGATGTTCCTCCAATAC 59.968 50.000 0.30 0.00 43.02 1.89
1962 4886 3.431673 TGTTCCTCCAATACACATGCA 57.568 42.857 0.00 0.00 0.00 3.96
1967 4891 1.065102 CTCCAATACACATGCAGCAGC 59.935 52.381 0.00 0.00 42.57 5.25
2000 4924 7.434307 CAGATGCAGGAAATACAGCTTTTATTG 59.566 37.037 0.00 0.00 0.00 1.90
2004 4928 7.039784 TGCAGGAAATACAGCTTTTATTGAACT 60.040 33.333 0.00 0.00 0.00 3.01
2024 4948 9.809096 TTGAACTCAAATGATCTAACTAGCTAG 57.191 33.333 19.44 19.44 32.11 3.42
2025 4949 8.417106 TGAACTCAAATGATCTAACTAGCTAGG 58.583 37.037 24.35 7.39 0.00 3.02
2026 4950 8.540507 AACTCAAATGATCTAACTAGCTAGGA 57.459 34.615 24.35 12.57 0.00 2.94
2027 4951 8.540507 ACTCAAATGATCTAACTAGCTAGGAA 57.459 34.615 24.35 10.94 0.00 3.36
2028 4952 8.417884 ACTCAAATGATCTAACTAGCTAGGAAC 58.582 37.037 24.35 11.34 0.00 3.62
2030 4954 6.673839 AATGATCTAACTAGCTAGGAACCC 57.326 41.667 24.35 9.47 0.00 4.11
2031 4955 5.405063 TGATCTAACTAGCTAGGAACCCT 57.595 43.478 24.35 4.85 37.71 4.34
2032 4956 6.526056 TGATCTAACTAGCTAGGAACCCTA 57.474 41.667 24.35 3.79 34.61 3.53
2034 4958 6.776603 TGATCTAACTAGCTAGGAACCCTAAC 59.223 42.308 24.35 8.03 35.49 2.34
2035 4959 5.453158 TCTAACTAGCTAGGAACCCTAACC 58.547 45.833 24.35 0.00 35.49 2.85
2036 4960 3.043465 ACTAGCTAGGAACCCTAACCC 57.957 52.381 24.35 0.00 35.49 4.11
2037 4961 2.316982 ACTAGCTAGGAACCCTAACCCA 59.683 50.000 24.35 0.00 35.49 4.51
2038 4962 2.354261 AGCTAGGAACCCTAACCCAA 57.646 50.000 0.00 0.00 35.49 4.12
2039 4963 2.639487 AGCTAGGAACCCTAACCCAAA 58.361 47.619 0.00 0.00 35.49 3.28
2040 4964 3.198827 AGCTAGGAACCCTAACCCAAAT 58.801 45.455 0.00 0.00 35.49 2.32
2041 4965 3.053619 AGCTAGGAACCCTAACCCAAATG 60.054 47.826 0.00 0.00 35.49 2.32
2042 4966 3.053917 GCTAGGAACCCTAACCCAAATGA 60.054 47.826 0.00 0.00 35.49 2.57
2043 4967 4.386424 GCTAGGAACCCTAACCCAAATGAT 60.386 45.833 0.00 0.00 35.49 2.45
2044 4968 4.251103 AGGAACCCTAACCCAAATGATC 57.749 45.455 0.00 0.00 28.47 2.92
2045 4969 3.052869 AGGAACCCTAACCCAAATGATCC 60.053 47.826 0.00 0.00 28.47 3.36
2046 4970 2.729028 ACCCTAACCCAAATGATCCG 57.271 50.000 0.00 0.00 0.00 4.18
2047 4971 1.214424 ACCCTAACCCAAATGATCCGG 59.786 52.381 0.00 0.00 0.00 5.14
2048 4972 1.318576 CCTAACCCAAATGATCCGGC 58.681 55.000 0.00 0.00 0.00 6.13
2049 4973 1.318576 CTAACCCAAATGATCCGGCC 58.681 55.000 0.00 0.00 0.00 6.13
2050 4974 0.464735 TAACCCAAATGATCCGGCCG 60.465 55.000 21.04 21.04 0.00 6.13
2051 4975 3.595758 CCCAAATGATCCGGCCGC 61.596 66.667 22.85 7.02 0.00 6.53
2052 4976 2.828095 CCAAATGATCCGGCCGCA 60.828 61.111 22.85 13.77 0.00 5.69
2053 4977 2.195567 CCAAATGATCCGGCCGCAT 61.196 57.895 22.85 12.02 0.00 4.73
2054 4978 1.283793 CAAATGATCCGGCCGCATC 59.716 57.895 22.52 22.52 0.00 3.91
2055 4979 1.152984 AAATGATCCGGCCGCATCA 60.153 52.632 32.62 32.62 33.55 3.07
2056 4980 1.168407 AAATGATCCGGCCGCATCAG 61.168 55.000 33.30 14.73 32.53 2.90
2057 4981 2.043604 AATGATCCGGCCGCATCAGA 62.044 55.000 33.30 19.65 32.53 3.27
2058 4982 2.356793 GATCCGGCCGCATCAGAG 60.357 66.667 24.24 6.58 0.00 3.35
2059 4983 3.873026 GATCCGGCCGCATCAGAGG 62.873 68.421 24.24 5.77 37.82 3.69
2064 4988 1.097547 CGGCCGCATCAGAGGAAAAT 61.098 55.000 14.67 0.00 36.74 1.82
2078 5002 4.858965 AGGAAAATGCCTCTTGATCTCT 57.141 40.909 0.00 0.00 30.76 3.10
2081 5005 2.345124 AATGCCTCTTGATCTCTGCC 57.655 50.000 0.00 0.00 0.00 4.85
2083 5007 0.540454 TGCCTCTTGATCTCTGCCAG 59.460 55.000 0.00 0.00 0.00 4.85
2085 5009 0.179051 CCTCTTGATCTCTGCCAGGC 60.179 60.000 3.66 3.66 0.00 4.85
2090 5014 2.092598 TGATCTCTGCCAGGCTCATA 57.907 50.000 14.15 0.00 0.00 2.15
2108 5032 4.910195 TCATATCTGCAAACTGGTTGAGT 58.090 39.130 10.13 0.00 39.87 3.41
2119 5043 6.037830 GCAAACTGGTTGAGTCTTAACTTGTA 59.962 38.462 10.13 0.00 39.87 2.41
2140 5064 4.072088 CGCGCCCGACTTGTTGAC 62.072 66.667 0.00 0.00 36.29 3.18
2141 5065 2.665185 GCGCCCGACTTGTTGACT 60.665 61.111 0.00 0.00 0.00 3.41
2144 5068 0.878523 CGCCCGACTTGTTGACTTCA 60.879 55.000 0.00 0.00 0.00 3.02
2150 5074 2.287644 CGACTTGTTGACTTCATGCACA 59.712 45.455 0.00 0.00 0.00 4.57
2156 5080 0.950555 TGACTTCATGCACACGCCTC 60.951 55.000 0.00 0.00 37.32 4.70
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
89 2564 8.884726 GTTCTAGCATATATATCTGTCGTCTGA 58.115 37.037 0.00 0.00 0.00 3.27
136 2611 6.961360 TTGACACCCAATAATGTAACACAA 57.039 33.333 0.00 0.00 0.00 3.33
263 2738 8.618240 TTAGGACAAAGGGAGTATCTGAATTA 57.382 34.615 0.00 0.00 33.73 1.40
265 2740 7.510675 TTTAGGACAAAGGGAGTATCTGAAT 57.489 36.000 0.00 0.00 33.73 2.57
269 2744 8.164057 AGAATTTTAGGACAAAGGGAGTATCT 57.836 34.615 0.00 0.00 33.73 1.98
270 2745 8.678199 CAAGAATTTTAGGACAAAGGGAGTATC 58.322 37.037 0.00 0.00 0.00 2.24
271 2746 8.170730 ACAAGAATTTTAGGACAAAGGGAGTAT 58.829 33.333 0.00 0.00 0.00 2.12
272 2747 7.523415 ACAAGAATTTTAGGACAAAGGGAGTA 58.477 34.615 0.00 0.00 0.00 2.59
273 2748 6.373759 ACAAGAATTTTAGGACAAAGGGAGT 58.626 36.000 0.00 0.00 0.00 3.85
274 2749 6.717084 AGACAAGAATTTTAGGACAAAGGGAG 59.283 38.462 0.00 0.00 0.00 4.30
276 2751 6.901081 AGACAAGAATTTTAGGACAAAGGG 57.099 37.500 0.00 0.00 0.00 3.95
292 2767 9.582431 CCGTATTTAGACAAATCTAAGACAAGA 57.418 33.333 9.81 0.00 45.93 3.02
293 2768 9.582431 TCCGTATTTAGACAAATCTAAGACAAG 57.418 33.333 9.81 3.88 45.93 3.16
295 2770 9.529325 CATCCGTATTTAGACAAATCTAAGACA 57.471 33.333 9.81 0.00 45.93 3.41
296 2771 9.530633 ACATCCGTATTTAGACAAATCTAAGAC 57.469 33.333 0.00 0.83 45.93 3.01
303 2778 9.832445 ACTTGATACATCCGTATTTAGACAAAT 57.168 29.630 0.00 0.00 38.48 2.32
304 2779 9.309516 GACTTGATACATCCGTATTTAGACAAA 57.690 33.333 0.00 0.00 38.48 2.83
305 2780 8.471609 TGACTTGATACATCCGTATTTAGACAA 58.528 33.333 0.00 0.00 38.48 3.18
306 2781 7.919091 GTGACTTGATACATCCGTATTTAGACA 59.081 37.037 0.00 0.00 38.48 3.41
307 2782 7.113124 CGTGACTTGATACATCCGTATTTAGAC 59.887 40.741 0.00 0.00 38.48 2.59
308 2783 7.136772 CGTGACTTGATACATCCGTATTTAGA 58.863 38.462 0.00 0.00 38.48 2.10
309 2784 6.916387 ACGTGACTTGATACATCCGTATTTAG 59.084 38.462 0.00 0.00 38.48 1.85
310 2785 6.798482 ACGTGACTTGATACATCCGTATTTA 58.202 36.000 0.00 0.00 38.48 1.40
311 2786 5.657474 ACGTGACTTGATACATCCGTATTT 58.343 37.500 0.00 0.00 38.48 1.40
312 2787 5.258456 ACGTGACTTGATACATCCGTATT 57.742 39.130 0.00 0.00 38.48 1.89
313 2788 4.913335 ACGTGACTTGATACATCCGTAT 57.087 40.909 0.00 0.00 41.16 3.06
314 2789 4.707030 AACGTGACTTGATACATCCGTA 57.293 40.909 0.00 0.00 0.00 4.02
315 2790 3.587797 AACGTGACTTGATACATCCGT 57.412 42.857 0.00 0.00 0.00 4.69
316 2791 3.924073 TCAAACGTGACTTGATACATCCG 59.076 43.478 0.00 0.00 0.00 4.18
317 2792 4.929808 ACTCAAACGTGACTTGATACATCC 59.070 41.667 1.83 0.00 32.53 3.51
318 2793 7.757097 ATACTCAAACGTGACTTGATACATC 57.243 36.000 1.83 0.00 32.53 3.06
319 2794 9.302345 CTAATACTCAAACGTGACTTGATACAT 57.698 33.333 1.83 0.00 32.53 2.29
320 2795 8.517056 TCTAATACTCAAACGTGACTTGATACA 58.483 33.333 1.83 0.00 32.53 2.29
321 2796 8.906636 TCTAATACTCAAACGTGACTTGATAC 57.093 34.615 1.83 0.00 32.53 2.24
323 2798 9.517609 GTATCTAATACTCAAACGTGACTTGAT 57.482 33.333 1.83 0.00 32.53 2.57
324 2799 8.517056 TGTATCTAATACTCAAACGTGACTTGA 58.483 33.333 1.50 1.50 36.70 3.02
325 2800 8.683550 TGTATCTAATACTCAAACGTGACTTG 57.316 34.615 0.00 0.00 36.70 3.16
326 2801 9.517609 GATGTATCTAATACTCAAACGTGACTT 57.482 33.333 0.00 0.00 36.70 3.01
327 2802 8.136165 GGATGTATCTAATACTCAAACGTGACT 58.864 37.037 0.00 0.00 36.70 3.41
328 2803 7.919091 TGGATGTATCTAATACTCAAACGTGAC 59.081 37.037 0.00 0.00 36.70 3.67
329 2804 8.002984 TGGATGTATCTAATACTCAAACGTGA 57.997 34.615 0.00 0.00 36.70 4.35
330 2805 8.818141 ATGGATGTATCTAATACTCAAACGTG 57.182 34.615 0.00 0.00 36.70 4.49
343 2818 9.720874 AGATTTGCCTAGATATGGATGTATCTA 57.279 33.333 0.00 4.21 40.79 1.98
344 2819 8.621126 AGATTTGCCTAGATATGGATGTATCT 57.379 34.615 0.00 2.43 42.50 1.98
347 2822 9.547279 TCTTAGATTTGCCTAGATATGGATGTA 57.453 33.333 0.00 0.00 0.00 2.29
348 2823 8.317679 GTCTTAGATTTGCCTAGATATGGATGT 58.682 37.037 0.00 0.00 0.00 3.06
349 2824 8.316946 TGTCTTAGATTTGCCTAGATATGGATG 58.683 37.037 0.00 0.00 0.00 3.51
350 2825 8.441311 TGTCTTAGATTTGCCTAGATATGGAT 57.559 34.615 0.00 0.00 0.00 3.41
351 2826 7.855784 TGTCTTAGATTTGCCTAGATATGGA 57.144 36.000 0.00 0.00 0.00 3.41
352 2827 8.370940 TCTTGTCTTAGATTTGCCTAGATATGG 58.629 37.037 0.00 0.00 0.00 2.74
353 2828 9.770097 TTCTTGTCTTAGATTTGCCTAGATATG 57.230 33.333 0.00 0.00 0.00 1.78
356 2831 9.692325 AAATTCTTGTCTTAGATTTGCCTAGAT 57.308 29.630 0.00 0.00 0.00 1.98
357 2832 9.520515 AAAATTCTTGTCTTAGATTTGCCTAGA 57.479 29.630 0.00 0.00 0.00 2.43
358 2833 9.565213 CAAAATTCTTGTCTTAGATTTGCCTAG 57.435 33.333 0.00 0.00 0.00 3.02
359 2834 8.522830 CCAAAATTCTTGTCTTAGATTTGCCTA 58.477 33.333 0.00 0.00 29.17 3.93
360 2835 7.381323 CCAAAATTCTTGTCTTAGATTTGCCT 58.619 34.615 0.00 0.00 29.17 4.75
361 2836 6.591448 CCCAAAATTCTTGTCTTAGATTTGCC 59.409 38.462 0.00 0.00 29.17 4.52
362 2837 7.329471 GTCCCAAAATTCTTGTCTTAGATTTGC 59.671 37.037 0.00 0.00 29.17 3.68
363 2838 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
364 2839 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
365 2840 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
366 2841 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
367 2842 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
368 2843 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
369 2844 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
370 2845 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
371 2846 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
372 2847 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
373 2848 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
374 2849 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
375 2850 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
376 2851 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
377 2852 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
378 2853 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
379 2854 1.558294 GTACTCCCTCCGTCCCAAAAT 59.442 52.381 0.00 0.00 0.00 1.82
380 2855 0.978907 GTACTCCCTCCGTCCCAAAA 59.021 55.000 0.00 0.00 0.00 2.44
381 2856 0.115745 AGTACTCCCTCCGTCCCAAA 59.884 55.000 0.00 0.00 0.00 3.28
382 2857 0.115745 AAGTACTCCCTCCGTCCCAA 59.884 55.000 0.00 0.00 0.00 4.12
383 2858 0.613853 CAAGTACTCCCTCCGTCCCA 60.614 60.000 0.00 0.00 0.00 4.37
384 2859 0.324091 TCAAGTACTCCCTCCGTCCC 60.324 60.000 0.00 0.00 0.00 4.46
385 2860 1.104630 CTCAAGTACTCCCTCCGTCC 58.895 60.000 0.00 0.00 0.00 4.79
386 2861 2.125773 TCTCAAGTACTCCCTCCGTC 57.874 55.000 0.00 0.00 0.00 4.79
387 2862 2.448453 CTTCTCAAGTACTCCCTCCGT 58.552 52.381 0.00 0.00 0.00 4.69
388 2863 1.751924 CCTTCTCAAGTACTCCCTCCG 59.248 57.143 0.00 0.00 0.00 4.63
389 2864 3.103080 TCCTTCTCAAGTACTCCCTCC 57.897 52.381 0.00 0.00 0.00 4.30
390 2865 3.386402 CCATCCTTCTCAAGTACTCCCTC 59.614 52.174 0.00 0.00 0.00 4.30
391 2866 3.246167 ACCATCCTTCTCAAGTACTCCCT 60.246 47.826 0.00 0.00 0.00 4.20
392 2867 3.108376 ACCATCCTTCTCAAGTACTCCC 58.892 50.000 0.00 0.00 0.00 4.30
393 2868 4.828072 AACCATCCTTCTCAAGTACTCC 57.172 45.455 0.00 0.00 0.00 3.85
394 2869 6.070710 AGGTAAACCATCCTTCTCAAGTACTC 60.071 42.308 0.00 0.00 38.89 2.59
395 2870 5.785940 AGGTAAACCATCCTTCTCAAGTACT 59.214 40.000 1.26 0.00 38.89 2.73
396 2871 5.875359 CAGGTAAACCATCCTTCTCAAGTAC 59.125 44.000 1.26 0.00 38.89 2.73
414 2889 3.754323 CGCTTAAAACCCATGTCAGGTAA 59.246 43.478 0.00 0.00 36.27 2.85
419 2894 4.274602 TCTACGCTTAAAACCCATGTCA 57.725 40.909 0.00 0.00 0.00 3.58
425 2900 8.791675 ACTAGAGTATATCTACGCTTAAAACCC 58.208 37.037 0.00 0.00 38.67 4.11
433 2912 8.452534 GCAAACATACTAGAGTATATCTACGCT 58.547 37.037 0.00 0.49 39.06 5.07
434 2913 8.235226 TGCAAACATACTAGAGTATATCTACGC 58.765 37.037 0.00 2.65 39.06 4.42
441 2920 7.505258 TGCCATTGCAAACATACTAGAGTATA 58.495 34.615 1.71 0.00 46.66 1.47
464 2950 2.861147 AGGACCTCAACTAAACCTGC 57.139 50.000 0.00 0.00 0.00 4.85
465 2951 5.485209 AACTAGGACCTCAACTAAACCTG 57.515 43.478 0.00 0.00 0.00 4.00
471 2957 4.838986 AGCTTCAAACTAGGACCTCAACTA 59.161 41.667 0.00 0.00 0.00 2.24
478 2965 4.009370 AGTGAAGCTTCAAACTAGGACC 57.991 45.455 29.99 14.38 39.21 4.46
485 2972 5.880341 ACTGTTGTTAGTGAAGCTTCAAAC 58.120 37.500 29.99 27.94 39.21 2.93
497 2984 5.067954 GGTTGGTTATCCACTGTTGTTAGT 58.932 41.667 0.00 0.00 44.22 2.24
516 3021 6.881065 CCTCATGACATAGTATAATGGGGTTG 59.119 42.308 9.14 0.00 34.69 3.77
527 3035 6.669631 TCTTACCTCACCTCATGACATAGTA 58.330 40.000 0.00 0.00 32.37 1.82
529 3037 6.041409 ACATCTTACCTCACCTCATGACATAG 59.959 42.308 0.00 0.00 32.37 2.23
543 3051 6.310711 CGTGAAAACTAAGGACATCTTACCTC 59.689 42.308 0.00 0.00 36.93 3.85
544 3052 6.164176 CGTGAAAACTAAGGACATCTTACCT 58.836 40.000 0.00 0.00 36.93 3.08
545 3053 5.163884 GCGTGAAAACTAAGGACATCTTACC 60.164 44.000 0.00 0.00 36.93 2.85
546 3054 5.163884 GGCGTGAAAACTAAGGACATCTTAC 60.164 44.000 0.00 0.00 36.93 2.34
547 3055 4.933400 GGCGTGAAAACTAAGGACATCTTA 59.067 41.667 0.00 0.00 36.93 2.10
548 3056 3.751698 GGCGTGAAAACTAAGGACATCTT 59.248 43.478 0.00 0.00 39.40 2.40
549 3057 3.244422 TGGCGTGAAAACTAAGGACATCT 60.244 43.478 0.00 0.00 0.00 2.90
550 3058 3.071479 TGGCGTGAAAACTAAGGACATC 58.929 45.455 0.00 0.00 0.00 3.06
551 3059 3.134574 TGGCGTGAAAACTAAGGACAT 57.865 42.857 0.00 0.00 0.00 3.06
552 3060 2.623878 TGGCGTGAAAACTAAGGACA 57.376 45.000 0.00 0.00 0.00 4.02
553 3061 3.974871 TTTGGCGTGAAAACTAAGGAC 57.025 42.857 0.00 0.00 0.00 3.85
554 3062 6.093495 CAGATATTTGGCGTGAAAACTAAGGA 59.907 38.462 0.00 0.00 0.00 3.36
559 3067 4.518970 ACACAGATATTTGGCGTGAAAACT 59.481 37.500 0.00 0.00 0.00 2.66
567 3075 9.515020 AACAAAATATAACACAGATATTTGGCG 57.485 29.630 0.00 0.00 38.74 5.69
599 3111 4.021102 TCTGGTTCAAGGAAGACCAATC 57.979 45.455 0.00 0.00 38.94 2.67
640 3152 3.082698 TGCATGCTCACAAGAACAAAC 57.917 42.857 20.33 0.00 0.00 2.93
654 3166 8.472413 AGGTATGGAATATTTGAATATGCATGC 58.528 33.333 11.82 11.82 32.17 4.06
975 3536 8.197988 TGACTCTAGTGTTTGTTTTTCTTCTC 57.802 34.615 0.00 0.00 0.00 2.87
993 3554 2.093288 CAGCAAGCCTTCCATGACTCTA 60.093 50.000 0.00 0.00 0.00 2.43
1070 3634 1.765597 GAAGGGGTTGTCTCCGGTGT 61.766 60.000 0.00 0.00 0.00 4.16
1138 3702 4.008933 GTCGTCAGGGCTGCCAGT 62.009 66.667 22.05 3.66 0.00 4.00
1140 3704 3.695606 GAGTCGTCAGGGCTGCCA 61.696 66.667 22.05 0.00 0.00 4.92
1158 3722 1.156736 CGGCAAACCCTAGTTGACTG 58.843 55.000 0.00 0.00 35.97 3.51
1159 3723 0.605589 GCGGCAAACCCTAGTTGACT 60.606 55.000 0.00 0.00 35.97 3.41
1161 3725 1.302993 GGCGGCAAACCCTAGTTGA 60.303 57.895 3.07 0.00 35.97 3.18
1163 3727 2.359478 CGGCGGCAAACCCTAGTT 60.359 61.111 10.53 0.00 38.03 2.24
1199 3766 4.451150 TCCATCACAGGACCGCGC 62.451 66.667 0.00 0.00 31.23 6.86
1204 3771 7.055667 TGATCTATTAACTCCATCACAGGAC 57.944 40.000 0.00 0.00 33.19 3.85
1217 3784 7.523219 ACGAGAGACGATGATGATCTATTAAC 58.477 38.462 0.00 0.00 45.77 2.01
1223 3790 4.261405 GGAAACGAGAGACGATGATGATCT 60.261 45.833 0.00 0.00 45.77 2.75
1261 3829 5.700373 CCAGGTCAAGAAGAAGAAGAAGAAG 59.300 44.000 0.00 0.00 0.00 2.85
1262 3830 5.455326 CCCAGGTCAAGAAGAAGAAGAAGAA 60.455 44.000 0.00 0.00 0.00 2.52
1272 3840 2.571653 CCATACACCCAGGTCAAGAAGA 59.428 50.000 0.00 0.00 0.00 2.87
1273 3841 2.305927 ACCATACACCCAGGTCAAGAAG 59.694 50.000 0.00 0.00 0.00 2.85
1276 3847 3.433598 CCATACCATACACCCAGGTCAAG 60.434 52.174 0.00 0.00 36.87 3.02
1280 3851 2.579624 TCCATACCATACACCCAGGT 57.420 50.000 0.00 0.00 39.41 4.00
1326 3905 4.218417 GTCCTAAACCACAGAACCGTACTA 59.782 45.833 0.00 0.00 0.00 1.82
1345 4156 3.261897 CCAGTATGTTTCTCTGTGGTCCT 59.738 47.826 0.00 0.00 0.00 3.85
1346 4157 3.260884 TCCAGTATGTTTCTCTGTGGTCC 59.739 47.826 0.00 0.00 0.00 4.46
1351 4162 6.950842 TCATTGATCCAGTATGTTTCTCTGT 58.049 36.000 0.00 0.00 0.00 3.41
1355 4166 9.685276 TGTAAATCATTGATCCAGTATGTTTCT 57.315 29.630 0.00 0.00 0.00 2.52
1356 4168 9.941664 CTGTAAATCATTGATCCAGTATGTTTC 57.058 33.333 0.00 0.00 0.00 2.78
1400 4322 9.832445 TGCAAAAACCTTTTATATTTTGGTACA 57.168 25.926 10.66 0.31 41.02 2.90
1403 4325 8.972458 ACTGCAAAAACCTTTTATATTTTGGT 57.028 26.923 10.66 0.00 41.02 3.67
1413 4335 9.619316 GTTCAATTTAAACTGCAAAAACCTTTT 57.381 25.926 0.00 0.00 0.00 2.27
1414 4336 9.008965 AGTTCAATTTAAACTGCAAAAACCTTT 57.991 25.926 2.85 0.00 35.68 3.11
1415 4337 8.450180 CAGTTCAATTTAAACTGCAAAAACCTT 58.550 29.630 14.40 0.00 44.94 3.50
1416 4338 7.973601 CAGTTCAATTTAAACTGCAAAAACCT 58.026 30.769 14.40 0.00 44.94 3.50
1426 4348 7.033185 AGACGTTTTGCAGTTCAATTTAAACT 58.967 30.769 0.00 0.00 37.44 2.66
1427 4349 7.216920 AGACGTTTTGCAGTTCAATTTAAAC 57.783 32.000 0.00 0.00 34.12 2.01
1428 4350 7.820044 AAGACGTTTTGCAGTTCAATTTAAA 57.180 28.000 0.00 0.00 34.12 1.52
1431 4353 9.691362 AATATAAGACGTTTTGCAGTTCAATTT 57.309 25.926 0.83 0.00 34.12 1.82
1432 4354 9.691362 AAATATAAGACGTTTTGCAGTTCAATT 57.309 25.926 0.83 0.00 34.12 2.32
1433 4355 9.691362 AAAATATAAGACGTTTTGCAGTTCAAT 57.309 25.926 0.83 0.00 34.12 2.57
1434 4356 8.963130 CAAAATATAAGACGTTTTGCAGTTCAA 58.037 29.630 0.83 0.00 36.43 2.69
1435 4357 7.593273 CCAAAATATAAGACGTTTTGCAGTTCA 59.407 33.333 0.83 0.00 39.99 3.18
1436 4358 7.593644 ACCAAAATATAAGACGTTTTGCAGTTC 59.406 33.333 0.83 0.00 39.99 3.01
1437 4359 7.430441 ACCAAAATATAAGACGTTTTGCAGTT 58.570 30.769 0.83 0.00 39.99 3.16
1438 4360 6.977213 ACCAAAATATAAGACGTTTTGCAGT 58.023 32.000 0.83 0.00 39.99 4.40
1444 4366 9.774413 CCCTCTATACCAAAATATAAGACGTTT 57.226 33.333 0.00 0.00 0.00 3.60
1445 4367 9.151177 TCCCTCTATACCAAAATATAAGACGTT 57.849 33.333 0.00 0.00 0.00 3.99
1446 4368 8.716674 TCCCTCTATACCAAAATATAAGACGT 57.283 34.615 0.00 0.00 0.00 4.34
1447 4369 8.804204 ACTCCCTCTATACCAAAATATAAGACG 58.196 37.037 0.00 0.00 0.00 4.18
1451 4373 9.592196 ACGTACTCCCTCTATACCAAAATATAA 57.408 33.333 0.00 0.00 0.00 0.98
1452 4374 9.592196 AACGTACTCCCTCTATACCAAAATATA 57.408 33.333 0.00 0.00 0.00 0.86
1453 4375 8.488308 AACGTACTCCCTCTATACCAAAATAT 57.512 34.615 0.00 0.00 0.00 1.28
1454 4376 7.902920 AACGTACTCCCTCTATACCAAAATA 57.097 36.000 0.00 0.00 0.00 1.40
1455 4377 6.803366 AACGTACTCCCTCTATACCAAAAT 57.197 37.500 0.00 0.00 0.00 1.82
1456 4378 6.610075 AAACGTACTCCCTCTATACCAAAA 57.390 37.500 0.00 0.00 0.00 2.44
1457 4379 6.891908 ACTAAACGTACTCCCTCTATACCAAA 59.108 38.462 0.00 0.00 0.00 3.28
1458 4380 6.426587 ACTAAACGTACTCCCTCTATACCAA 58.573 40.000 0.00 0.00 0.00 3.67
1459 4381 6.006275 ACTAAACGTACTCCCTCTATACCA 57.994 41.667 0.00 0.00 0.00 3.25
1460 4382 6.951062 AACTAAACGTACTCCCTCTATACC 57.049 41.667 0.00 0.00 0.00 2.73
1464 4386 9.905713 TCTATTTAACTAAACGTACTCCCTCTA 57.094 33.333 0.00 0.00 0.00 2.43
1465 4387 8.814038 TCTATTTAACTAAACGTACTCCCTCT 57.186 34.615 0.00 0.00 0.00 3.69
1466 4388 7.647318 GCTCTATTTAACTAAACGTACTCCCTC 59.353 40.741 0.00 0.00 0.00 4.30
1467 4389 7.487484 GCTCTATTTAACTAAACGTACTCCCT 58.513 38.462 0.00 0.00 0.00 4.20
1468 4390 6.416161 CGCTCTATTTAACTAAACGTACTCCC 59.584 42.308 0.00 0.00 0.00 4.30
1469 4391 7.189512 TCGCTCTATTTAACTAAACGTACTCC 58.810 38.462 0.00 0.00 0.00 3.85
1470 4392 8.680261 CATCGCTCTATTTAACTAAACGTACTC 58.320 37.037 0.00 0.00 0.00 2.59
1471 4393 8.400947 TCATCGCTCTATTTAACTAAACGTACT 58.599 33.333 0.00 0.00 0.00 2.73
1472 4394 8.552469 TCATCGCTCTATTTAACTAAACGTAC 57.448 34.615 0.00 0.00 0.00 3.67
1473 4395 9.177304 CATCATCGCTCTATTTAACTAAACGTA 57.823 33.333 0.00 0.00 0.00 3.57
1474 4396 7.705325 ACATCATCGCTCTATTTAACTAAACGT 59.295 33.333 0.00 0.00 0.00 3.99
1475 4397 8.062231 ACATCATCGCTCTATTTAACTAAACG 57.938 34.615 0.00 0.00 0.00 3.60
1476 4398 9.638300 CAACATCATCGCTCTATTTAACTAAAC 57.362 33.333 0.00 0.00 0.00 2.01
1477 4399 8.335356 GCAACATCATCGCTCTATTTAACTAAA 58.665 33.333 0.00 0.00 0.00 1.85
1478 4400 7.710907 AGCAACATCATCGCTCTATTTAACTAA 59.289 33.333 0.00 0.00 0.00 2.24
1489 4411 0.376152 CACCAGCAACATCATCGCTC 59.624 55.000 0.00 0.00 32.48 5.03
1492 4414 0.448990 CCACACCAGCAACATCATCG 59.551 55.000 0.00 0.00 0.00 3.84
1528 4450 4.556104 CGCTCCTAATTCATGCCAAATCAG 60.556 45.833 0.00 0.00 0.00 2.90
1538 4460 2.831333 CTGCTGACGCTCCTAATTCAT 58.169 47.619 0.00 0.00 36.97 2.57
1562 4484 9.455847 GAAAATGTAAGAAATAATGCTGGCTAG 57.544 33.333 0.00 0.00 0.00 3.42
1563 4485 8.128582 CGAAAATGTAAGAAATAATGCTGGCTA 58.871 33.333 0.00 0.00 0.00 3.93
1567 4489 8.894409 TGACGAAAATGTAAGAAATAATGCTG 57.106 30.769 0.00 0.00 0.00 4.41
1572 4494 9.210329 TGCTACTGACGAAAATGTAAGAAATAA 57.790 29.630 0.00 0.00 0.00 1.40
1598 4520 5.814188 CACACAACATCACTAGAGCATACAT 59.186 40.000 0.00 0.00 0.00 2.29
1601 4523 4.183865 GCACACAACATCACTAGAGCATA 58.816 43.478 0.00 0.00 0.00 3.14
1604 4526 2.414481 CTGCACACAACATCACTAGAGC 59.586 50.000 0.00 0.00 0.00 4.09
1664 4588 4.680975 CGGAGGGAGTAGAAAGCTTAAAGG 60.681 50.000 0.00 0.00 0.00 3.11
1668 4592 3.022406 GACGGAGGGAGTAGAAAGCTTA 58.978 50.000 0.00 0.00 0.00 3.09
1670 4594 1.476477 GACGGAGGGAGTAGAAAGCT 58.524 55.000 0.00 0.00 0.00 3.74
1671 4595 0.460722 GGACGGAGGGAGTAGAAAGC 59.539 60.000 0.00 0.00 0.00 3.51
1672 4596 0.739561 CGGACGGAGGGAGTAGAAAG 59.260 60.000 0.00 0.00 0.00 2.62
1675 4599 1.565390 TTCCGGACGGAGGGAGTAGA 61.565 60.000 13.64 0.00 46.06 2.59
1676 4600 0.467659 ATTCCGGACGGAGGGAGTAG 60.468 60.000 13.64 0.00 46.06 2.57
1677 4601 0.032813 AATTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
1678 4602 0.032813 TAATTCCGGACGGAGGGAGT 60.033 55.000 13.64 1.45 46.06 3.85
1679 4603 0.388294 GTAATTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
1680 4604 0.032813 AGTAATTCCGGACGGAGGGA 60.033 55.000 13.64 0.00 46.06 4.20
1681 4605 0.828677 AAGTAATTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
1682 4606 1.206371 ACAAGTAATTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
1683 4607 2.537401 GACAAGTAATTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
1684 4608 1.135315 CGACAAGTAATTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
1685 4609 1.274596 CGACAAGTAATTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
1686 4610 0.643820 GCGACAAGTAATTCCGGACG 59.356 55.000 1.83 1.53 0.00 4.79
1687 4611 1.717194 TGCGACAAGTAATTCCGGAC 58.283 50.000 1.83 0.00 0.00 4.79
1688 4612 2.459060 TTGCGACAAGTAATTCCGGA 57.541 45.000 0.00 0.00 0.00 5.14
1689 4613 3.546002 TTTTGCGACAAGTAATTCCGG 57.454 42.857 0.00 0.00 0.00 5.14
1690 4614 5.150683 TCATTTTTGCGACAAGTAATTCCG 58.849 37.500 0.00 0.00 0.00 4.30
1691 4615 7.116233 ACATTCATTTTTGCGACAAGTAATTCC 59.884 33.333 0.00 0.00 0.00 3.01
1692 4616 8.006741 ACATTCATTTTTGCGACAAGTAATTC 57.993 30.769 0.00 0.00 0.00 2.17
1693 4617 7.945033 ACATTCATTTTTGCGACAAGTAATT 57.055 28.000 0.00 0.00 0.00 1.40
1694 4618 9.289303 GATACATTCATTTTTGCGACAAGTAAT 57.711 29.630 0.00 0.00 0.00 1.89
1695 4619 8.511321 AGATACATTCATTTTTGCGACAAGTAA 58.489 29.630 0.00 0.00 0.00 2.24
1696 4620 8.039603 AGATACATTCATTTTTGCGACAAGTA 57.960 30.769 0.00 0.00 0.00 2.24
1697 4621 6.913170 AGATACATTCATTTTTGCGACAAGT 58.087 32.000 0.00 0.00 0.00 3.16
1698 4622 8.390354 TCTAGATACATTCATTTTTGCGACAAG 58.610 33.333 0.00 0.00 0.00 3.16
1699 4623 8.262715 TCTAGATACATTCATTTTTGCGACAA 57.737 30.769 0.00 0.00 0.00 3.18
1700 4624 7.841915 TCTAGATACATTCATTTTTGCGACA 57.158 32.000 0.00 0.00 0.00 4.35
1701 4625 8.391106 AGTTCTAGATACATTCATTTTTGCGAC 58.609 33.333 0.00 0.00 0.00 5.19
1702 4626 8.492673 AGTTCTAGATACATTCATTTTTGCGA 57.507 30.769 0.00 0.00 0.00 5.10
1730 4654 9.828852 GAAGAAATCGATGTATCTAGACGTATT 57.171 33.333 0.00 0.00 0.00 1.89
1731 4655 9.000486 TGAAGAAATCGATGTATCTAGACGTAT 58.000 33.333 0.00 0.00 0.00 3.06
1732 4656 8.374327 TGAAGAAATCGATGTATCTAGACGTA 57.626 34.615 0.00 0.00 0.00 3.57
1733 4657 7.260558 TGAAGAAATCGATGTATCTAGACGT 57.739 36.000 0.00 0.00 0.00 4.34
1734 4658 7.644157 TGTTGAAGAAATCGATGTATCTAGACG 59.356 37.037 0.00 0.00 0.00 4.18
1735 4659 8.858003 TGTTGAAGAAATCGATGTATCTAGAC 57.142 34.615 0.00 4.60 0.00 2.59
1736 4660 9.521503 CTTGTTGAAGAAATCGATGTATCTAGA 57.478 33.333 0.00 0.00 0.00 2.43
1737 4661 9.307121 ACTTGTTGAAGAAATCGATGTATCTAG 57.693 33.333 0.00 0.06 32.98 2.43
1739 4663 9.653287 TTACTTGTTGAAGAAATCGATGTATCT 57.347 29.630 0.00 0.37 32.98 1.98
1743 4667 8.237267 GGAATTACTTGTTGAAGAAATCGATGT 58.763 33.333 0.00 0.00 32.98 3.06
1744 4668 7.426456 CGGAATTACTTGTTGAAGAAATCGATG 59.574 37.037 0.00 0.00 32.98 3.84
1745 4669 7.333423 TCGGAATTACTTGTTGAAGAAATCGAT 59.667 33.333 0.00 0.00 32.98 3.59
1746 4670 6.647481 TCGGAATTACTTGTTGAAGAAATCGA 59.353 34.615 0.00 0.00 32.98 3.59
1747 4671 6.827641 TCGGAATTACTTGTTGAAGAAATCG 58.172 36.000 0.00 0.00 32.98 3.34
1748 4672 7.268447 CGTTCGGAATTACTTGTTGAAGAAATC 59.732 37.037 0.00 0.00 32.98 2.17
1749 4673 7.075741 CGTTCGGAATTACTTGTTGAAGAAAT 58.924 34.615 0.00 0.00 32.98 2.17
1750 4674 6.423862 CGTTCGGAATTACTTGTTGAAGAAA 58.576 36.000 0.00 0.00 32.98 2.52
1751 4675 5.049954 CCGTTCGGAATTACTTGTTGAAGAA 60.050 40.000 5.19 0.00 32.98 2.52
1752 4676 4.449743 CCGTTCGGAATTACTTGTTGAAGA 59.550 41.667 5.19 0.00 32.98 2.87
1753 4677 4.449743 TCCGTTCGGAATTACTTGTTGAAG 59.550 41.667 11.66 0.00 35.07 3.02
1754 4678 4.378774 TCCGTTCGGAATTACTTGTTGAA 58.621 39.130 11.66 0.00 0.00 2.69
1755 4679 3.991773 CTCCGTTCGGAATTACTTGTTGA 59.008 43.478 14.79 0.00 33.41 3.18
1756 4680 3.124636 CCTCCGTTCGGAATTACTTGTTG 59.875 47.826 14.79 0.00 33.41 3.33
1757 4681 3.332034 CCTCCGTTCGGAATTACTTGTT 58.668 45.455 14.79 0.00 33.41 2.83
1758 4682 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
1759 4683 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
1760 4684 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
1761 4685 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
1762 4686 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
1763 4687 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
1764 4688 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
1765 4689 1.400737 CTACTCCCTCCGTTCGGAAT 58.599 55.000 14.79 2.09 33.41 3.01
1766 4690 1.318158 GCTACTCCCTCCGTTCGGAA 61.318 60.000 14.79 0.04 33.41 4.30
1767 4691 1.751927 GCTACTCCCTCCGTTCGGA 60.752 63.158 13.34 13.34 0.00 4.55
1768 4692 1.321074 AAGCTACTCCCTCCGTTCGG 61.321 60.000 4.74 4.74 0.00 4.30
1769 4693 0.531200 AAAGCTACTCCCTCCGTTCG 59.469 55.000 0.00 0.00 0.00 3.95
1770 4694 2.764439 AAAAGCTACTCCCTCCGTTC 57.236 50.000 0.00 0.00 0.00 3.95
1771 4695 4.838904 AATAAAAGCTACTCCCTCCGTT 57.161 40.909 0.00 0.00 0.00 4.44
1772 4696 4.838904 AAATAAAAGCTACTCCCTCCGT 57.161 40.909 0.00 0.00 0.00 4.69
1773 4697 5.667466 TGTAAATAAAAGCTACTCCCTCCG 58.333 41.667 0.00 0.00 0.00 4.63
1774 4698 7.280356 TCATGTAAATAAAAGCTACTCCCTCC 58.720 38.462 0.00 0.00 0.00 4.30
1775 4699 8.910351 ATCATGTAAATAAAAGCTACTCCCTC 57.090 34.615 0.00 0.00 0.00 4.30
1776 4700 8.718656 AGATCATGTAAATAAAAGCTACTCCCT 58.281 33.333 0.00 0.00 0.00 4.20
1777 4701 8.910351 AGATCATGTAAATAAAAGCTACTCCC 57.090 34.615 0.00 0.00 0.00 4.30
1815 4739 5.428496 AATCGTGTGAATTATGCAGATGG 57.572 39.130 0.00 0.00 0.00 3.51
1816 4740 6.722301 AGAAATCGTGTGAATTATGCAGATG 58.278 36.000 0.00 0.00 0.00 2.90
1829 4753 3.369147 CAGTTCAGCCTAGAAATCGTGTG 59.631 47.826 0.00 0.00 0.00 3.82
1850 4774 3.263369 TTGTAGGGTAGGGTGAAGACA 57.737 47.619 0.00 0.00 0.00 3.41
1868 4792 6.829703 TCAAACATTTTCAGTGTGCTTTTTG 58.170 32.000 0.00 0.00 0.00 2.44
1873 4797 5.126061 ACTTCTCAAACATTTTCAGTGTGCT 59.874 36.000 0.00 0.00 0.00 4.40
1877 4801 6.473455 GGTCAACTTCTCAAACATTTTCAGTG 59.527 38.462 0.00 0.00 0.00 3.66
1892 4816 0.034059 CGCACTCCTGGTCAACTTCT 59.966 55.000 0.00 0.00 0.00 2.85
1893 4817 0.033504 TCGCACTCCTGGTCAACTTC 59.966 55.000 0.00 0.00 0.00 3.01
1926 4850 1.981533 GAACATCTTGCGCTTCTTTGC 59.018 47.619 9.73 0.00 0.00 3.68
1946 4870 1.674441 CTGCTGCATGTGTATTGGAGG 59.326 52.381 1.31 0.00 33.58 4.30
1962 4886 1.448540 GCATCTGGTACGTGCTGCT 60.449 57.895 3.01 0.00 36.02 4.24
1967 4891 2.093306 TTTCCTGCATCTGGTACGTG 57.907 50.000 0.00 0.00 0.00 4.49
1968 4892 3.196901 TGTATTTCCTGCATCTGGTACGT 59.803 43.478 0.00 0.00 0.00 3.57
1969 4893 3.792401 TGTATTTCCTGCATCTGGTACG 58.208 45.455 0.00 0.00 0.00 3.67
1970 4894 3.561725 GCTGTATTTCCTGCATCTGGTAC 59.438 47.826 0.00 0.00 0.00 3.34
1971 4895 3.455910 AGCTGTATTTCCTGCATCTGGTA 59.544 43.478 0.00 0.00 0.00 3.25
1972 4896 2.240667 AGCTGTATTTCCTGCATCTGGT 59.759 45.455 0.00 0.00 0.00 4.00
1973 4897 2.928334 AGCTGTATTTCCTGCATCTGG 58.072 47.619 0.00 0.00 0.00 3.86
2000 4924 8.634444 TCCTAGCTAGTTAGATCATTTGAGTTC 58.366 37.037 19.31 0.00 0.00 3.01
2004 4928 7.202011 GGGTTCCTAGCTAGTTAGATCATTTGA 60.202 40.741 19.31 2.25 0.00 2.69
2010 4934 6.209192 GGTTAGGGTTCCTAGCTAGTTAGATC 59.791 46.154 19.31 8.58 37.42 2.75
2016 4940 2.316982 TGGGTTAGGGTTCCTAGCTAGT 59.683 50.000 19.31 2.36 37.42 2.57
2021 4945 4.855298 TCATTTGGGTTAGGGTTCCTAG 57.145 45.455 0.00 0.00 37.42 3.02
2022 4946 4.167307 GGATCATTTGGGTTAGGGTTCCTA 59.833 45.833 0.00 0.00 34.61 2.94
2023 4947 3.052869 GGATCATTTGGGTTAGGGTTCCT 60.053 47.826 0.00 0.00 37.71 3.36
2024 4948 3.296854 GGATCATTTGGGTTAGGGTTCC 58.703 50.000 0.00 0.00 0.00 3.62
2025 4949 2.949644 CGGATCATTTGGGTTAGGGTTC 59.050 50.000 0.00 0.00 0.00 3.62
2026 4950 2.357777 CCGGATCATTTGGGTTAGGGTT 60.358 50.000 0.00 0.00 0.00 4.11
2027 4951 1.214424 CCGGATCATTTGGGTTAGGGT 59.786 52.381 0.00 0.00 0.00 4.34
2028 4952 1.981256 CCGGATCATTTGGGTTAGGG 58.019 55.000 0.00 0.00 0.00 3.53
2030 4954 1.318576 GGCCGGATCATTTGGGTTAG 58.681 55.000 5.05 0.00 0.00 2.34
2031 4955 0.464735 CGGCCGGATCATTTGGGTTA 60.465 55.000 20.10 0.00 0.00 2.85
2032 4956 1.752694 CGGCCGGATCATTTGGGTT 60.753 57.895 20.10 0.00 0.00 4.11
2034 4958 3.595758 GCGGCCGGATCATTTGGG 61.596 66.667 29.38 0.00 0.00 4.12
2035 4959 2.133742 GATGCGGCCGGATCATTTGG 62.134 60.000 43.23 8.66 41.65 3.28
2036 4960 1.283793 GATGCGGCCGGATCATTTG 59.716 57.895 43.23 9.43 41.65 2.32
2037 4961 1.152984 TGATGCGGCCGGATCATTT 60.153 52.632 45.88 23.39 45.60 2.32
2038 4962 2.510411 TGATGCGGCCGGATCATT 59.490 55.556 45.88 23.80 45.60 2.57
2041 4965 2.356793 CTCTGATGCGGCCGGATC 60.357 66.667 42.28 42.28 42.24 3.36
2042 4966 3.933722 CCTCTGATGCGGCCGGAT 61.934 66.667 33.56 33.56 0.00 4.18
2044 4968 3.680620 TTTCCTCTGATGCGGCCGG 62.681 63.158 29.38 10.00 0.00 6.13
2045 4969 1.097547 ATTTTCCTCTGATGCGGCCG 61.098 55.000 24.05 24.05 0.00 6.13
2046 4970 0.383231 CATTTTCCTCTGATGCGGCC 59.617 55.000 0.00 0.00 0.00 6.13
2047 4971 0.248784 GCATTTTCCTCTGATGCGGC 60.249 55.000 0.00 0.00 37.09 6.53
2048 4972 0.383231 GGCATTTTCCTCTGATGCGG 59.617 55.000 0.00 0.00 45.35 5.69
2049 4973 1.386533 AGGCATTTTCCTCTGATGCG 58.613 50.000 0.00 0.00 45.35 4.73
2057 4981 4.525024 CAGAGATCAAGAGGCATTTTCCT 58.475 43.478 0.00 0.00 39.67 3.36
2058 4982 3.066481 GCAGAGATCAAGAGGCATTTTCC 59.934 47.826 0.00 0.00 0.00 3.13
2059 4983 3.066481 GGCAGAGATCAAGAGGCATTTTC 59.934 47.826 0.00 0.00 0.00 2.29
2064 4988 0.540454 CTGGCAGAGATCAAGAGGCA 59.460 55.000 9.42 0.00 0.00 4.75
2072 4996 2.833338 AGATATGAGCCTGGCAGAGATC 59.167 50.000 22.65 17.26 0.00 2.75
2073 4997 2.568062 CAGATATGAGCCTGGCAGAGAT 59.432 50.000 22.65 9.12 0.00 2.75
2078 5002 0.547553 TTGCAGATATGAGCCTGGCA 59.452 50.000 22.65 0.22 0.00 4.92
2081 5005 2.617308 CCAGTTTGCAGATATGAGCCTG 59.383 50.000 0.00 0.00 0.00 4.85
2083 5007 2.648059 ACCAGTTTGCAGATATGAGCC 58.352 47.619 0.00 0.00 0.00 4.70
2085 5009 4.940046 ACTCAACCAGTTTGCAGATATGAG 59.060 41.667 0.00 9.75 38.14 2.90
2090 5014 3.498774 AGACTCAACCAGTTTGCAGAT 57.501 42.857 0.00 0.00 34.41 2.90
2140 5064 2.780643 CGAGGCGTGTGCATGAAG 59.219 61.111 0.00 0.00 45.35 3.02
2141 5065 3.422303 GCGAGGCGTGTGCATGAA 61.422 61.111 0.00 0.00 45.35 2.57
2156 5080 1.359848 AGACATTTAGCAAGACGGCG 58.640 50.000 4.80 4.80 39.27 6.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.