Multiple sequence alignment - TraesCS3B01G069300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G069300 chr3B 100.000 4788 0 0 1 4788 41305291 41300504 0.000000e+00 8842.0
1 TraesCS3B01G069300 chr3B 95.833 72 3 0 3282 3353 41301927 41301856 3.030000e-22 117.0
2 TraesCS3B01G069300 chr3B 95.833 72 3 0 3365 3436 41302010 41301939 3.030000e-22 117.0
3 TraesCS3B01G069300 chr3B 89.610 77 6 2 4577 4652 352496957 352497032 3.940000e-16 97.1
4 TraesCS3B01G069300 chr3B 76.142 197 34 10 4576 4765 744709069 744708879 1.840000e-14 91.6
5 TraesCS3B01G069300 chr3A 92.795 3886 154 41 961 4788 194064307 194060490 0.000000e+00 5509.0
6 TraesCS3B01G069300 chr3A 94.061 3637 120 38 382 3965 193877031 193873438 0.000000e+00 5432.0
7 TraesCS3B01G069300 chr3A 94.660 3296 106 27 382 3628 33431913 33428639 0.000000e+00 5048.0
8 TraesCS3B01G069300 chr3A 92.430 819 43 4 3971 4788 193869564 193868764 0.000000e+00 1151.0
9 TraesCS3B01G069300 chr3A 94.847 524 16 7 382 900 194064821 194064304 0.000000e+00 808.0
10 TraesCS3B01G069300 chr3A 89.293 467 41 7 382 843 193878218 193877756 1.160000e-160 577.0
11 TraesCS3B01G069300 chr3A 88.699 469 40 9 382 843 194066009 194065547 1.160000e-155 560.0
12 TraesCS3B01G069300 chr3A 87.898 471 45 8 382 843 33433106 33432639 1.170000e-150 544.0
13 TraesCS3B01G069300 chr3A 91.057 123 6 4 864 985 212122779 212122661 1.380000e-35 161.0
14 TraesCS3B01G069300 chr3A 91.057 123 6 4 862 983 610418847 610418965 1.380000e-35 161.0
15 TraesCS3B01G069300 chr3A 94.286 70 4 0 3365 3434 193874098 193874029 1.820000e-19 108.0
16 TraesCS3B01G069300 chr3A 93.056 72 5 0 3365 3436 33428980 33428909 6.550000e-19 106.0
17 TraesCS3B01G069300 chr3A 90.000 80 8 0 3274 3353 193874026 193873947 2.360000e-18 104.0
18 TraesCS3B01G069300 chr3A 89.286 84 8 1 3270 3353 194061886 194061804 2.360000e-18 104.0
19 TraesCS3B01G069300 chr3A 95.918 49 2 0 322 370 193879779 193879731 3.970000e-11 80.5
20 TraesCS3B01G069300 chr3A 95.833 48 2 0 323 370 33434676 33434629 1.430000e-10 78.7
21 TraesCS3B01G069300 chr3A 93.878 49 3 0 322 370 194067566 194067518 1.850000e-09 75.0
22 TraesCS3B01G069300 chr5D 90.233 430 32 7 382 804 396429113 396429539 1.950000e-153 553.0
23 TraesCS3B01G069300 chr5D 87.640 267 29 4 4309 4574 92667 92930 1.670000e-79 307.0
24 TraesCS3B01G069300 chr5B 88.140 430 37 11 382 804 476450787 476451209 2.570000e-137 499.0
25 TraesCS3B01G069300 chr5B 84.926 272 39 2 4307 4576 498264494 498264223 1.700000e-69 274.0
26 TraesCS3B01G069300 chr5B 91.870 123 9 1 862 983 531869370 531869248 2.290000e-38 171.0
27 TraesCS3B01G069300 chr5B 91.736 121 9 1 864 983 531864217 531864097 2.960000e-37 167.0
28 TraesCS3B01G069300 chr5B 91.736 121 5 4 864 983 599612347 599612463 3.830000e-36 163.0
29 TraesCS3B01G069300 chr5B 81.325 166 17 9 17 175 693616794 693616636 6.510000e-24 122.0
30 TraesCS3B01G069300 chr4D 90.226 266 25 1 4309 4574 211734849 211735113 3.550000e-91 346.0
31 TraesCS3B01G069300 chr4D 85.393 267 36 3 4309 4574 4242280 4242544 1.700000e-69 274.0
32 TraesCS3B01G069300 chr4B 86.614 254 33 1 4321 4574 4308817 4308565 3.650000e-71 279.0
33 TraesCS3B01G069300 chr2D 86.275 255 34 1 4320 4574 641433122 641432869 4.720000e-70 276.0
34 TraesCS3B01G069300 chr2D 84.211 266 41 1 4309 4574 499086575 499086839 1.710000e-64 257.0
35 TraesCS3B01G069300 chr2D 80.357 168 23 4 4145 4312 649704906 649704749 8.420000e-23 119.0
36 TraesCS3B01G069300 chr2D 83.721 86 10 3 4577 4660 246675340 246675423 1.430000e-10 78.7
37 TraesCS3B01G069300 chr6D 85.606 264 35 2 4313 4574 355842945 355842683 1.700000e-69 274.0
38 TraesCS3B01G069300 chr6D 83.077 195 26 6 4577 4767 210608265 210608456 2.290000e-38 171.0
39 TraesCS3B01G069300 chr5A 84.574 188 18 5 4115 4302 30686511 30686335 4.920000e-40 176.0
40 TraesCS3B01G069300 chr5A 84.574 188 18 5 4115 4302 32154250 32154426 4.920000e-40 176.0
41 TraesCS3B01G069300 chr3D 91.473 129 9 2 864 991 511281674 511281801 4.920000e-40 176.0
42 TraesCS3B01G069300 chr3D 91.803 122 9 1 863 983 511275934 511276055 8.240000e-38 169.0
43 TraesCS3B01G069300 chr1B 78.788 198 35 6 4577 4770 627127651 627127457 5.030000e-25 126.0
44 TraesCS3B01G069300 chr7B 77.202 193 37 6 4577 4765 295139087 295139276 6.550000e-19 106.0
45 TraesCS3B01G069300 chr2B 87.342 79 8 2 4577 4654 461750718 461750795 6.600000e-14 89.8
46 TraesCS3B01G069300 chr1D 82.178 101 15 3 4577 4675 179786965 179786866 3.070000e-12 84.2
47 TraesCS3B01G069300 chr6B 86.486 74 8 2 4621 4693 205036183 205036255 3.970000e-11 80.5
48 TraesCS3B01G069300 chr4A 83.544 79 11 2 4577 4654 311056125 311056202 6.650000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G069300 chr3B 41300504 41305291 4787 True 3025.333333 8842 97.222000 1 4788 3 chr3B.!!$R2 4787
1 TraesCS3B01G069300 chr3A 33428639 33434676 6037 True 1444.175000 5048 92.861750 323 3628 4 chr3A.!!$R2 3305
2 TraesCS3B01G069300 chr3A 194060490 194067566 7076 True 1411.200000 5509 91.901000 322 4788 5 chr3A.!!$R4 4466
3 TraesCS3B01G069300 chr3A 193868764 193879779 11015 True 1242.083333 5432 92.664667 322 4788 6 chr3A.!!$R3 4466

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
885 3608 0.106217 AGTGTGGTGGGTTTGGGAAG 60.106 55.000 0.00 0.00 0.0 3.46 F
1405 4129 0.546122 ATTGCTCTGCGGATTGGGTA 59.454 50.000 0.00 0.00 0.0 3.69 F
2486 5254 1.141657 GATTGGAGGGTAGATGCTGCA 59.858 52.381 4.13 4.13 0.0 4.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2428 5193 0.036952 AGCCACAAGGTCATCGACTG 60.037 55.0 0.00 0.0 37.19 3.51 R
2544 5312 0.407528 TTGGGAGCATAACTGGGCAA 59.592 50.0 0.00 0.0 0.00 4.52 R
4177 10831 0.718904 GCGATCGTGCATGTGTTGTA 59.281 50.0 17.81 0.0 34.15 2.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 9.686683 ATATAATTTGGCAGTAGTGAAAGTTCT 57.313 29.630 0.42 0.00 0.00 3.01
36 37 5.695851 ATTTGGCAGTAGTGAAAGTTCTG 57.304 39.130 0.42 0.00 37.68 3.02
37 38 3.838244 TGGCAGTAGTGAAAGTTCTGT 57.162 42.857 0.42 0.00 37.06 3.41
38 39 4.150897 TGGCAGTAGTGAAAGTTCTGTT 57.849 40.909 0.42 0.00 37.06 3.16
39 40 4.127171 TGGCAGTAGTGAAAGTTCTGTTC 58.873 43.478 0.42 0.00 37.06 3.18
40 41 4.127171 GGCAGTAGTGAAAGTTCTGTTCA 58.873 43.478 0.42 0.00 37.06 3.18
41 42 4.574828 GGCAGTAGTGAAAGTTCTGTTCAA 59.425 41.667 0.42 0.00 37.06 2.69
42 43 5.065988 GGCAGTAGTGAAAGTTCTGTTCAAA 59.934 40.000 0.42 0.00 37.06 2.69
43 44 6.238759 GGCAGTAGTGAAAGTTCTGTTCAAAT 60.239 38.462 0.42 0.00 37.06 2.32
44 45 6.634436 GCAGTAGTGAAAGTTCTGTTCAAATG 59.366 38.462 0.42 0.00 37.06 2.32
45 46 7.467267 GCAGTAGTGAAAGTTCTGTTCAAATGA 60.467 37.037 0.42 0.00 37.06 2.57
46 47 8.562892 CAGTAGTGAAAGTTCTGTTCAAATGAT 58.437 33.333 0.00 0.00 36.77 2.45
47 48 9.778741 AGTAGTGAAAGTTCTGTTCAAATGATA 57.221 29.630 0.00 0.00 36.77 2.15
67 68 8.706322 ATGATATTAAGAACCAAATACACCCC 57.294 34.615 0.00 0.00 0.00 4.95
68 69 6.768861 TGATATTAAGAACCAAATACACCCCG 59.231 38.462 0.00 0.00 0.00 5.73
69 70 4.637387 TTAAGAACCAAATACACCCCGA 57.363 40.909 0.00 0.00 0.00 5.14
70 71 3.512219 AAGAACCAAATACACCCCGAA 57.488 42.857 0.00 0.00 0.00 4.30
71 72 3.067684 AGAACCAAATACACCCCGAAG 57.932 47.619 0.00 0.00 0.00 3.79
72 73 2.640826 AGAACCAAATACACCCCGAAGA 59.359 45.455 0.00 0.00 0.00 2.87
73 74 2.781681 ACCAAATACACCCCGAAGAG 57.218 50.000 0.00 0.00 0.00 2.85
74 75 2.262637 ACCAAATACACCCCGAAGAGA 58.737 47.619 0.00 0.00 0.00 3.10
75 76 2.640826 ACCAAATACACCCCGAAGAGAA 59.359 45.455 0.00 0.00 0.00 2.87
76 77 3.270877 CCAAATACACCCCGAAGAGAAG 58.729 50.000 0.00 0.00 0.00 2.85
77 78 3.307480 CCAAATACACCCCGAAGAGAAGT 60.307 47.826 0.00 0.00 0.00 3.01
78 79 4.081309 CCAAATACACCCCGAAGAGAAGTA 60.081 45.833 0.00 0.00 0.00 2.24
79 80 5.484715 CAAATACACCCCGAAGAGAAGTAA 58.515 41.667 0.00 0.00 0.00 2.24
80 81 5.750352 AATACACCCCGAAGAGAAGTAAA 57.250 39.130 0.00 0.00 0.00 2.01
81 82 5.750352 ATACACCCCGAAGAGAAGTAAAA 57.250 39.130 0.00 0.00 0.00 1.52
82 83 4.635699 ACACCCCGAAGAGAAGTAAAAT 57.364 40.909 0.00 0.00 0.00 1.82
83 84 4.324267 ACACCCCGAAGAGAAGTAAAATG 58.676 43.478 0.00 0.00 0.00 2.32
84 85 4.202430 ACACCCCGAAGAGAAGTAAAATGT 60.202 41.667 0.00 0.00 0.00 2.71
85 86 4.760204 CACCCCGAAGAGAAGTAAAATGTT 59.240 41.667 0.00 0.00 0.00 2.71
86 87 5.240844 CACCCCGAAGAGAAGTAAAATGTTT 59.759 40.000 0.00 0.00 0.00 2.83
87 88 5.240844 ACCCCGAAGAGAAGTAAAATGTTTG 59.759 40.000 0.00 0.00 0.00 2.93
88 89 5.335661 CCCCGAAGAGAAGTAAAATGTTTGG 60.336 44.000 0.00 0.00 0.00 3.28
89 90 5.240844 CCCGAAGAGAAGTAAAATGTTTGGT 59.759 40.000 0.00 0.00 0.00 3.67
90 91 6.238925 CCCGAAGAGAAGTAAAATGTTTGGTT 60.239 38.462 0.00 0.00 0.00 3.67
91 92 6.636850 CCGAAGAGAAGTAAAATGTTTGGTTG 59.363 38.462 0.00 0.00 0.00 3.77
92 93 7.193595 CGAAGAGAAGTAAAATGTTTGGTTGT 58.806 34.615 0.00 0.00 0.00 3.32
93 94 7.700656 CGAAGAGAAGTAAAATGTTTGGTTGTT 59.299 33.333 0.00 0.00 0.00 2.83
94 95 9.366216 GAAGAGAAGTAAAATGTTTGGTTGTTT 57.634 29.630 0.00 0.00 0.00 2.83
95 96 8.702163 AGAGAAGTAAAATGTTTGGTTGTTTG 57.298 30.769 0.00 0.00 0.00 2.93
96 97 7.277760 AGAGAAGTAAAATGTTTGGTTGTTTGC 59.722 33.333 0.00 0.00 0.00 3.68
97 98 6.876257 AGAAGTAAAATGTTTGGTTGTTTGCA 59.124 30.769 0.00 0.00 0.00 4.08
98 99 7.389053 AGAAGTAAAATGTTTGGTTGTTTGCAA 59.611 29.630 0.00 0.00 0.00 4.08
99 100 7.622893 AGTAAAATGTTTGGTTGTTTGCAAT 57.377 28.000 0.00 0.00 36.92 3.56
100 101 8.049655 AGTAAAATGTTTGGTTGTTTGCAATT 57.950 26.923 0.00 0.00 36.92 2.32
101 102 7.967303 AGTAAAATGTTTGGTTGTTTGCAATTG 59.033 29.630 0.00 0.00 36.92 2.32
102 103 6.506500 AAATGTTTGGTTGTTTGCAATTGA 57.493 29.167 10.34 0.00 36.92 2.57
103 104 5.738118 ATGTTTGGTTGTTTGCAATTGAG 57.262 34.783 10.34 0.00 36.92 3.02
104 105 4.573900 TGTTTGGTTGTTTGCAATTGAGT 58.426 34.783 10.34 0.00 36.92 3.41
105 106 4.999950 TGTTTGGTTGTTTGCAATTGAGTT 59.000 33.333 10.34 0.00 36.92 3.01
106 107 5.106791 TGTTTGGTTGTTTGCAATTGAGTTG 60.107 36.000 10.34 0.00 40.90 3.16
107 108 4.462508 TGGTTGTTTGCAATTGAGTTGA 57.537 36.364 10.34 0.00 40.37 3.18
108 109 4.180057 TGGTTGTTTGCAATTGAGTTGAC 58.820 39.130 10.34 0.61 40.37 3.18
109 110 3.555547 GGTTGTTTGCAATTGAGTTGACC 59.444 43.478 10.34 5.68 40.37 4.02
110 111 4.180057 GTTGTTTGCAATTGAGTTGACCA 58.820 39.130 10.34 0.00 40.37 4.02
111 112 4.462508 TGTTTGCAATTGAGTTGACCAA 57.537 36.364 10.34 0.00 40.37 3.67
112 113 5.021033 TGTTTGCAATTGAGTTGACCAAT 57.979 34.783 10.34 0.00 40.37 3.16
113 114 4.809958 TGTTTGCAATTGAGTTGACCAATG 59.190 37.500 10.34 0.00 40.37 2.82
114 115 4.933505 TTGCAATTGAGTTGACCAATGA 57.066 36.364 10.34 0.00 40.37 2.57
115 116 5.471556 TTGCAATTGAGTTGACCAATGAT 57.528 34.783 10.34 0.00 40.37 2.45
116 117 5.063180 TGCAATTGAGTTGACCAATGATC 57.937 39.130 10.34 0.00 40.37 2.92
117 118 4.523558 TGCAATTGAGTTGACCAATGATCA 59.476 37.500 10.34 0.00 40.37 2.92
118 119 5.186215 TGCAATTGAGTTGACCAATGATCAT 59.814 36.000 10.34 1.18 40.37 2.45
119 120 6.377712 TGCAATTGAGTTGACCAATGATCATA 59.622 34.615 9.04 0.00 40.37 2.15
120 121 7.093858 TGCAATTGAGTTGACCAATGATCATAA 60.094 33.333 9.04 0.00 40.37 1.90
121 122 7.924412 GCAATTGAGTTGACCAATGATCATAAT 59.076 33.333 9.04 0.00 40.37 1.28
122 123 9.811995 CAATTGAGTTGACCAATGATCATAATT 57.188 29.630 9.04 4.47 40.37 1.40
147 148 7.648039 TTTTCTTAAACTAAAGGGTTCAGCA 57.352 32.000 0.00 0.00 0.00 4.41
148 149 7.833285 TTTCTTAAACTAAAGGGTTCAGCAT 57.167 32.000 0.00 0.00 0.00 3.79
149 150 7.833285 TTCTTAAACTAAAGGGTTCAGCATT 57.167 32.000 0.00 0.00 0.00 3.56
150 151 7.448748 TCTTAAACTAAAGGGTTCAGCATTC 57.551 36.000 0.00 0.00 0.00 2.67
151 152 7.231467 TCTTAAACTAAAGGGTTCAGCATTCT 58.769 34.615 0.00 0.00 0.00 2.40
152 153 8.380099 TCTTAAACTAAAGGGTTCAGCATTCTA 58.620 33.333 0.00 0.00 0.00 2.10
153 154 8.927675 TTAAACTAAAGGGTTCAGCATTCTAA 57.072 30.769 0.00 0.00 0.00 2.10
154 155 7.833285 AAACTAAAGGGTTCAGCATTCTAAA 57.167 32.000 0.00 0.00 0.00 1.85
155 156 8.422577 AAACTAAAGGGTTCAGCATTCTAAAT 57.577 30.769 0.00 0.00 0.00 1.40
156 157 7.396540 ACTAAAGGGTTCAGCATTCTAAATG 57.603 36.000 0.00 0.00 0.00 2.32
157 158 5.665916 AAAGGGTTCAGCATTCTAAATGG 57.334 39.130 2.17 0.00 0.00 3.16
158 159 3.026694 AGGGTTCAGCATTCTAAATGGC 58.973 45.455 2.17 0.00 0.00 4.40
159 160 2.223572 GGGTTCAGCATTCTAAATGGCG 60.224 50.000 2.17 0.00 0.00 5.69
160 161 2.682856 GGTTCAGCATTCTAAATGGCGA 59.317 45.455 2.17 0.00 0.00 5.54
161 162 3.316308 GGTTCAGCATTCTAAATGGCGAT 59.684 43.478 2.17 0.00 0.00 4.58
162 163 4.515191 GGTTCAGCATTCTAAATGGCGATA 59.485 41.667 2.17 0.00 0.00 2.92
163 164 5.444122 GTTCAGCATTCTAAATGGCGATAC 58.556 41.667 2.17 0.00 0.00 2.24
164 165 4.702831 TCAGCATTCTAAATGGCGATACA 58.297 39.130 2.17 0.00 0.00 2.29
165 166 5.308014 TCAGCATTCTAAATGGCGATACAT 58.692 37.500 2.17 0.00 0.00 2.29
166 167 5.764686 TCAGCATTCTAAATGGCGATACATT 59.235 36.000 2.17 0.00 42.56 2.71
167 168 6.934083 TCAGCATTCTAAATGGCGATACATTA 59.066 34.615 2.17 0.00 40.01 1.90
168 169 7.607607 TCAGCATTCTAAATGGCGATACATTAT 59.392 33.333 2.17 0.00 40.01 1.28
169 170 7.695201 CAGCATTCTAAATGGCGATACATTATG 59.305 37.037 2.17 0.00 40.01 1.90
170 171 7.391554 AGCATTCTAAATGGCGATACATTATGT 59.608 33.333 2.58 2.58 40.01 2.29
171 172 7.482743 GCATTCTAAATGGCGATACATTATGTG 59.517 37.037 8.26 0.00 40.01 3.21
172 173 8.506437 CATTCTAAATGGCGATACATTATGTGT 58.494 33.333 8.26 0.31 40.01 3.72
173 174 9.719355 ATTCTAAATGGCGATACATTATGTGTA 57.281 29.630 8.26 0.00 46.73 2.90
174 175 8.757164 TCTAAATGGCGATACATTATGTGTAG 57.243 34.615 8.26 2.96 45.94 2.74
175 176 8.581578 TCTAAATGGCGATACATTATGTGTAGA 58.418 33.333 8.26 0.00 45.94 2.59
176 177 9.371136 CTAAATGGCGATACATTATGTGTAGAT 57.629 33.333 8.26 0.00 45.94 1.98
178 179 9.890629 AAATGGCGATACATTATGTGTAGATAT 57.109 29.630 8.26 0.00 45.94 1.63
179 180 8.877808 ATGGCGATACATTATGTGTAGATATG 57.122 34.615 8.26 0.00 45.94 1.78
180 181 6.756542 TGGCGATACATTATGTGTAGATATGC 59.243 38.462 8.26 1.87 45.94 3.14
181 182 6.201044 GGCGATACATTATGTGTAGATATGCC 59.799 42.308 8.26 6.90 45.94 4.40
182 183 6.074835 GCGATACATTATGTGTAGATATGCCG 60.075 42.308 8.26 0.19 45.94 5.69
183 184 7.193595 CGATACATTATGTGTAGATATGCCGA 58.806 38.462 8.26 0.00 45.94 5.54
184 185 7.862873 CGATACATTATGTGTAGATATGCCGAT 59.137 37.037 8.26 0.00 45.94 4.18
185 186 8.877808 ATACATTATGTGTAGATATGCCGATG 57.122 34.615 8.26 0.00 45.94 3.84
186 187 6.701340 ACATTATGTGTAGATATGCCGATGT 58.299 36.000 0.00 0.00 39.91 3.06
187 188 6.591448 ACATTATGTGTAGATATGCCGATGTG 59.409 38.462 0.00 0.00 39.91 3.21
188 189 3.385193 TGTGTAGATATGCCGATGTGG 57.615 47.619 0.00 0.00 42.50 4.17
189 190 2.962421 TGTGTAGATATGCCGATGTGGA 59.038 45.455 0.00 0.00 42.00 4.02
190 191 3.005791 TGTGTAGATATGCCGATGTGGAG 59.994 47.826 0.00 0.00 42.00 3.86
191 192 3.005897 GTGTAGATATGCCGATGTGGAGT 59.994 47.826 0.00 0.00 42.00 3.85
192 193 3.641436 TGTAGATATGCCGATGTGGAGTT 59.359 43.478 0.00 0.00 42.00 3.01
193 194 3.117491 AGATATGCCGATGTGGAGTTG 57.883 47.619 0.00 0.00 42.00 3.16
194 195 1.532868 GATATGCCGATGTGGAGTTGC 59.467 52.381 0.00 0.00 42.00 4.17
195 196 0.541392 TATGCCGATGTGGAGTTGCT 59.459 50.000 0.00 0.00 42.00 3.91
196 197 0.322816 ATGCCGATGTGGAGTTGCTT 60.323 50.000 0.00 0.00 42.00 3.91
197 198 0.323302 TGCCGATGTGGAGTTGCTTA 59.677 50.000 0.00 0.00 42.00 3.09
198 199 1.271108 TGCCGATGTGGAGTTGCTTAA 60.271 47.619 0.00 0.00 42.00 1.85
199 200 2.017049 GCCGATGTGGAGTTGCTTAAT 58.983 47.619 0.00 0.00 42.00 1.40
200 201 2.423538 GCCGATGTGGAGTTGCTTAATT 59.576 45.455 0.00 0.00 42.00 1.40
201 202 3.119495 GCCGATGTGGAGTTGCTTAATTT 60.119 43.478 0.00 0.00 42.00 1.82
202 203 4.414852 CCGATGTGGAGTTGCTTAATTTG 58.585 43.478 0.00 0.00 42.00 2.32
203 204 4.082787 CCGATGTGGAGTTGCTTAATTTGT 60.083 41.667 0.00 0.00 42.00 2.83
204 205 5.460646 CGATGTGGAGTTGCTTAATTTGTT 58.539 37.500 0.00 0.00 0.00 2.83
205 206 6.348950 CCGATGTGGAGTTGCTTAATTTGTTA 60.349 38.462 0.00 0.00 42.00 2.41
206 207 7.250569 CGATGTGGAGTTGCTTAATTTGTTAT 58.749 34.615 0.00 0.00 0.00 1.89
207 208 7.754924 CGATGTGGAGTTGCTTAATTTGTTATT 59.245 33.333 0.00 0.00 0.00 1.40
208 209 9.423061 GATGTGGAGTTGCTTAATTTGTTATTT 57.577 29.630 0.00 0.00 0.00 1.40
209 210 9.777297 ATGTGGAGTTGCTTAATTTGTTATTTT 57.223 25.926 0.00 0.00 0.00 1.82
210 211 9.606631 TGTGGAGTTGCTTAATTTGTTATTTTT 57.393 25.926 0.00 0.00 0.00 1.94
211 212 9.862585 GTGGAGTTGCTTAATTTGTTATTTTTG 57.137 29.630 0.00 0.00 0.00 2.44
212 213 9.606631 TGGAGTTGCTTAATTTGTTATTTTTGT 57.393 25.926 0.00 0.00 0.00 2.83
213 214 9.862585 GGAGTTGCTTAATTTGTTATTTTTGTG 57.137 29.630 0.00 0.00 0.00 3.33
230 231 5.616488 TTTGTGTATTTCTTTAGTCGGGC 57.384 39.130 0.00 0.00 0.00 6.13
231 232 4.274602 TGTGTATTTCTTTAGTCGGGCA 57.725 40.909 0.00 0.00 0.00 5.36
232 233 4.839121 TGTGTATTTCTTTAGTCGGGCAT 58.161 39.130 0.00 0.00 0.00 4.40
233 234 4.873827 TGTGTATTTCTTTAGTCGGGCATC 59.126 41.667 0.00 0.00 0.00 3.91
234 235 4.025979 GTGTATTTCTTTAGTCGGGCATCG 60.026 45.833 0.00 0.00 40.90 3.84
235 236 3.536956 ATTTCTTTAGTCGGGCATCGA 57.463 42.857 0.00 0.00 46.77 3.59
245 246 3.230743 TCGGGCATCGATGTGTATATG 57.769 47.619 25.47 9.74 43.74 1.78
246 247 1.660607 CGGGCATCGATGTGTATATGC 59.339 52.381 25.47 10.87 43.13 3.14
247 248 2.675032 CGGGCATCGATGTGTATATGCT 60.675 50.000 25.47 0.00 43.33 3.79
248 249 3.338249 GGGCATCGATGTGTATATGCTT 58.662 45.455 25.47 0.00 43.33 3.91
249 250 4.503910 GGGCATCGATGTGTATATGCTTA 58.496 43.478 25.47 0.00 43.33 3.09
250 251 4.568359 GGGCATCGATGTGTATATGCTTAG 59.432 45.833 25.47 0.00 43.33 2.18
251 252 4.568359 GGCATCGATGTGTATATGCTTAGG 59.432 45.833 25.47 0.00 43.33 2.69
252 253 4.568359 GCATCGATGTGTATATGCTTAGGG 59.432 45.833 25.47 0.00 41.16 3.53
253 254 5.724328 CATCGATGTGTATATGCTTAGGGT 58.276 41.667 17.50 0.00 0.00 4.34
254 255 6.627287 GCATCGATGTGTATATGCTTAGGGTA 60.627 42.308 25.47 0.00 41.16 3.69
255 256 6.904463 TCGATGTGTATATGCTTAGGGTAA 57.096 37.500 0.00 0.00 0.00 2.85
256 257 6.920817 TCGATGTGTATATGCTTAGGGTAAG 58.079 40.000 0.00 0.00 38.80 2.34
257 258 6.717997 TCGATGTGTATATGCTTAGGGTAAGA 59.282 38.462 0.00 0.00 38.02 2.10
258 259 7.396339 TCGATGTGTATATGCTTAGGGTAAGAT 59.604 37.037 0.00 0.00 38.02 2.40
259 260 7.489435 CGATGTGTATATGCTTAGGGTAAGATG 59.511 40.741 0.00 0.00 38.02 2.90
260 261 7.849322 TGTGTATATGCTTAGGGTAAGATGA 57.151 36.000 0.00 0.00 38.02 2.92
261 262 8.435931 TGTGTATATGCTTAGGGTAAGATGAT 57.564 34.615 0.00 0.00 38.02 2.45
262 263 8.314021 TGTGTATATGCTTAGGGTAAGATGATG 58.686 37.037 0.00 0.00 38.02 3.07
263 264 7.278868 GTGTATATGCTTAGGGTAAGATGATGC 59.721 40.741 0.00 0.00 38.02 3.91
264 265 3.492102 TGCTTAGGGTAAGATGATGCC 57.508 47.619 0.00 0.00 38.02 4.40
265 266 3.048600 TGCTTAGGGTAAGATGATGCCT 58.951 45.455 0.00 0.00 38.02 4.75
266 267 3.071602 TGCTTAGGGTAAGATGATGCCTC 59.928 47.826 0.00 0.00 38.02 4.70
267 268 3.326297 GCTTAGGGTAAGATGATGCCTCT 59.674 47.826 0.00 0.00 38.02 3.69
268 269 4.802248 GCTTAGGGTAAGATGATGCCTCTG 60.802 50.000 0.00 0.00 38.02 3.35
269 270 2.769209 AGGGTAAGATGATGCCTCTGT 58.231 47.619 0.00 0.00 0.00 3.41
270 271 3.118531 AGGGTAAGATGATGCCTCTGTT 58.881 45.455 0.00 0.00 0.00 3.16
271 272 3.135530 AGGGTAAGATGATGCCTCTGTTC 59.864 47.826 0.00 0.00 0.00 3.18
272 273 3.135530 GGGTAAGATGATGCCTCTGTTCT 59.864 47.826 0.00 0.00 0.00 3.01
273 274 4.125703 GGTAAGATGATGCCTCTGTTCTG 58.874 47.826 0.00 0.00 0.00 3.02
274 275 3.996921 AAGATGATGCCTCTGTTCTGT 57.003 42.857 0.00 0.00 0.00 3.41
275 276 3.996921 AGATGATGCCTCTGTTCTGTT 57.003 42.857 0.00 0.00 0.00 3.16
276 277 5.426689 AAGATGATGCCTCTGTTCTGTTA 57.573 39.130 0.00 0.00 0.00 2.41
277 278 5.627182 AGATGATGCCTCTGTTCTGTTAT 57.373 39.130 0.00 0.00 0.00 1.89
278 279 6.737720 AGATGATGCCTCTGTTCTGTTATA 57.262 37.500 0.00 0.00 0.00 0.98
279 280 6.520272 AGATGATGCCTCTGTTCTGTTATAC 58.480 40.000 0.00 0.00 0.00 1.47
280 281 5.939764 TGATGCCTCTGTTCTGTTATACT 57.060 39.130 0.00 0.00 0.00 2.12
281 282 7.507277 AGATGATGCCTCTGTTCTGTTATACTA 59.493 37.037 0.00 0.00 0.00 1.82
282 283 7.603180 TGATGCCTCTGTTCTGTTATACTAT 57.397 36.000 0.00 0.00 0.00 2.12
283 284 7.661968 TGATGCCTCTGTTCTGTTATACTATC 58.338 38.462 0.00 0.00 0.00 2.08
284 285 7.287696 TGATGCCTCTGTTCTGTTATACTATCA 59.712 37.037 0.00 0.00 0.00 2.15
285 286 7.418337 TGCCTCTGTTCTGTTATACTATCAA 57.582 36.000 0.00 0.00 0.00 2.57
286 287 8.023021 TGCCTCTGTTCTGTTATACTATCAAT 57.977 34.615 0.00 0.00 0.00 2.57
287 288 7.928167 TGCCTCTGTTCTGTTATACTATCAATG 59.072 37.037 0.00 0.00 0.00 2.82
288 289 7.928706 GCCTCTGTTCTGTTATACTATCAATGT 59.071 37.037 0.00 0.00 0.00 2.71
289 290 9.254133 CCTCTGTTCTGTTATACTATCAATGTG 57.746 37.037 0.00 0.00 0.00 3.21
290 291 9.809096 CTCTGTTCTGTTATACTATCAATGTGT 57.191 33.333 0.00 0.00 0.00 3.72
295 296 9.936759 TTCTGTTATACTATCAATGTGTTGACA 57.063 29.630 0.00 0.00 46.43 3.58
296 297 9.936759 TCTGTTATACTATCAATGTGTTGACAA 57.063 29.630 0.00 0.00 46.43 3.18
303 304 8.044060 ACTATCAATGTGTTGACAATGTTAGG 57.956 34.615 0.00 0.00 46.43 2.69
304 305 5.119931 TCAATGTGTTGACAATGTTAGGC 57.880 39.130 0.00 0.00 39.36 3.93
305 306 4.582240 TCAATGTGTTGACAATGTTAGGCA 59.418 37.500 0.00 0.00 39.36 4.75
306 307 5.243507 TCAATGTGTTGACAATGTTAGGCAT 59.756 36.000 0.00 0.00 39.36 4.40
307 308 6.432472 TCAATGTGTTGACAATGTTAGGCATA 59.568 34.615 0.00 0.00 39.36 3.14
308 309 6.832520 ATGTGTTGACAATGTTAGGCATAA 57.167 33.333 0.00 0.00 36.67 1.90
309 310 6.641169 TGTGTTGACAATGTTAGGCATAAA 57.359 33.333 0.00 0.00 36.67 1.40
310 311 6.442952 TGTGTTGACAATGTTAGGCATAAAC 58.557 36.000 0.00 0.00 36.67 2.01
311 312 5.861787 GTGTTGACAATGTTAGGCATAAACC 59.138 40.000 0.00 0.00 36.67 3.27
312 313 5.536538 TGTTGACAATGTTAGGCATAAACCA 59.463 36.000 0.00 0.00 36.67 3.67
313 314 6.040955 TGTTGACAATGTTAGGCATAAACCAA 59.959 34.615 0.00 0.00 36.67 3.67
314 315 6.849085 TGACAATGTTAGGCATAAACCAAT 57.151 33.333 0.00 0.00 36.67 3.16
315 316 6.629128 TGACAATGTTAGGCATAAACCAATG 58.371 36.000 0.00 0.00 36.67 2.82
316 317 6.210385 TGACAATGTTAGGCATAAACCAATGT 59.790 34.615 3.06 3.06 36.67 2.71
317 318 6.630071 ACAATGTTAGGCATAAACCAATGTC 58.370 36.000 0.00 0.00 36.67 3.06
318 319 5.852282 ATGTTAGGCATAAACCAATGTCC 57.148 39.130 0.00 0.00 35.74 4.02
319 320 4.929479 TGTTAGGCATAAACCAATGTCCT 58.071 39.130 0.00 0.00 37.26 3.85
320 321 5.329399 TGTTAGGCATAAACCAATGTCCTT 58.671 37.500 0.00 0.00 35.95 3.36
325 326 4.485163 GCATAAACCAATGTCCTTCACAC 58.515 43.478 0.00 0.00 38.04 3.82
370 371 7.237871 TGGAATTTTAACGTATGTCATGAACG 58.762 34.615 15.10 15.10 42.17 3.95
379 380 5.893863 CGTATGTCATGAACGTATGTCATG 58.106 41.667 18.51 18.51 41.68 3.07
380 381 5.458779 CGTATGTCATGAACGTATGTCATGT 59.541 40.000 21.93 10.50 41.24 3.21
382 383 7.166804 CGTATGTCATGAACGTATGTCATGTTA 59.833 37.037 21.93 14.98 41.24 2.41
383 384 8.978539 GTATGTCATGAACGTATGTCATGTTAT 58.021 33.333 21.93 18.94 41.24 1.89
430 3148 8.799091 CATATTCATTATACTCGTCCATCGTTC 58.201 37.037 0.00 0.00 40.80 3.95
445 3163 4.158394 CCATCGTTCTGATTCCAAATGGTT 59.842 41.667 0.00 0.00 34.13 3.67
487 3205 8.958119 TCCTACAAAACTGATATATTCACCAC 57.042 34.615 0.00 0.00 0.00 4.16
488 3206 7.990886 TCCTACAAAACTGATATATTCACCACC 59.009 37.037 0.00 0.00 0.00 4.61
694 3417 3.333029 TGCAGCTAGTACAGATTTGCA 57.667 42.857 0.00 1.85 36.15 4.08
726 3449 9.781834 TTGTCTTGAACATAGTACTTTTGTTTG 57.218 29.630 19.16 14.19 37.82 2.93
764 3487 6.936900 TCCTTTCAGGAATCTAGTTTTCTGTG 59.063 38.462 17.70 11.09 42.51 3.66
885 3608 0.106217 AGTGTGGTGGGTTTGGGAAG 60.106 55.000 0.00 0.00 0.00 3.46
1183 3907 4.090761 AGGATCAAATATGGCGTCATGT 57.909 40.909 13.98 2.11 34.96 3.21
1300 4024 5.540911 ACTTGGTTAATGTGGATTTTGCTG 58.459 37.500 0.00 0.00 0.00 4.41
1394 4118 5.755375 ACAATCGGTATTCTGTATTGCTCTG 59.245 40.000 0.00 0.00 32.10 3.35
1405 4129 0.546122 ATTGCTCTGCGGATTGGGTA 59.454 50.000 0.00 0.00 0.00 3.69
1633 4385 7.592938 TGTATACAAGTTGCAGAATTCCTTTG 58.407 34.615 2.20 0.00 0.00 2.77
1635 4387 4.685924 ACAAGTTGCAGAATTCCTTTGTG 58.314 39.130 1.81 0.00 0.00 3.33
1639 4391 4.887071 AGTTGCAGAATTCCTTTGTGTGTA 59.113 37.500 0.65 0.00 31.37 2.90
1640 4392 4.829064 TGCAGAATTCCTTTGTGTGTAC 57.171 40.909 0.65 0.00 31.37 2.90
1650 4403 3.181511 CCTTTGTGTGTACTGTGTGTGTG 60.182 47.826 0.00 0.00 0.00 3.82
1880 4645 6.158598 AGTTGTATGCTGCAAAATAACTTGG 58.841 36.000 18.26 0.00 0.00 3.61
1881 4646 5.973899 TGTATGCTGCAAAATAACTTGGA 57.026 34.783 6.36 0.00 0.00 3.53
2054 4819 8.662781 TTATTAAGGTGATAACTGATGCTCAC 57.337 34.615 0.00 0.00 37.79 3.51
2178 4943 4.903054 TGCCAATCTGCTATTAGATCTGG 58.097 43.478 5.18 0.00 36.42 3.86
2215 4980 5.532406 GGCTATTGCTGGTAGATGAATTCAA 59.468 40.000 13.09 0.00 39.59 2.69
2229 4994 6.606395 AGATGAATTCAAAGATTCCCAAGGAG 59.394 38.462 13.09 0.00 35.61 3.69
2248 5013 7.766278 CCAAGGAGATCCAATTAGTTATATCCG 59.234 40.741 0.92 0.00 35.38 4.18
2252 5017 7.418025 GGAGATCCAATTAGTTATATCCGGGAG 60.418 44.444 0.00 0.00 35.64 4.30
2255 5020 6.258354 TCCAATTAGTTATATCCGGGAGCTA 58.742 40.000 0.00 0.00 0.00 3.32
2342 5107 1.176527 AATTCCTGCACAACCATCCG 58.823 50.000 0.00 0.00 0.00 4.18
2345 5110 2.360350 CTGCACAACCATCCGGCT 60.360 61.111 0.00 0.00 34.57 5.52
2428 5193 8.110860 TCAATGGGTCAAATAGAGAAAAAGAC 57.889 34.615 0.00 0.00 0.00 3.01
2432 5197 6.710744 TGGGTCAAATAGAGAAAAAGACAGTC 59.289 38.462 0.00 0.00 0.00 3.51
2453 5218 2.868583 CGATGACCTTGTGGCTAAGATG 59.131 50.000 4.07 0.00 36.63 2.90
2457 5222 3.327757 TGACCTTGTGGCTAAGATGAAGT 59.672 43.478 4.07 0.00 36.63 3.01
2463 5228 6.128172 CCTTGTGGCTAAGATGAAGTTTACTG 60.128 42.308 4.07 0.00 0.00 2.74
2486 5254 1.141657 GATTGGAGGGTAGATGCTGCA 59.858 52.381 4.13 4.13 0.00 4.41
2544 5312 3.217681 ACAACGACCCCAATAACACTT 57.782 42.857 0.00 0.00 0.00 3.16
2547 5315 1.883926 ACGACCCCAATAACACTTTGC 59.116 47.619 0.00 0.00 0.00 3.68
2565 5333 1.322442 GCCCAGTTATGCTCCCAATC 58.678 55.000 0.00 0.00 0.00 2.67
2568 5336 1.140852 CCAGTTATGCTCCCAATCCGA 59.859 52.381 0.00 0.00 0.00 4.55
2572 5340 0.758734 TATGCTCCCAATCCGAGTGG 59.241 55.000 7.95 7.95 35.77 4.00
2647 5415 9.613428 TTTTCTCATAATTCGAGTAATCCACAT 57.387 29.630 5.07 0.00 0.00 3.21
2771 5539 9.851686 TGGAGTATATTGCTTCATACAGATTTT 57.148 29.630 0.00 0.00 31.33 1.82
2811 5579 8.985315 ATGCTTATTGAAGATCTTGTTATGGA 57.015 30.769 14.00 5.75 34.25 3.41
2929 5697 0.320421 TGCTTGGGAGAACTACACGC 60.320 55.000 0.00 0.00 0.00 5.34
3088 5860 3.301906 CACTAAGTGAGAAGCGATTGTCG 59.698 47.826 6.06 0.00 38.20 4.35
3128 5900 2.143122 TGTGGTCGAAATTGCAGAGAC 58.857 47.619 0.00 0.00 0.00 3.36
3129 5901 2.143122 GTGGTCGAAATTGCAGAGACA 58.857 47.619 0.00 0.00 33.84 3.41
3185 5957 5.116180 ACATGTTCTGAGTTGACGAAGAAA 58.884 37.500 0.00 0.00 30.85 2.52
3201 5973 5.345202 ACGAAGAAATAGTTGTTAGCACTCG 59.655 40.000 0.00 0.00 0.00 4.18
3205 5977 8.997621 AAGAAATAGTTGTTAGCACTCGATTA 57.002 30.769 0.00 0.00 0.00 1.75
3259 6031 2.213499 GCAGGGGATATCGTCTGTTTG 58.787 52.381 18.81 4.58 0.00 2.93
3266 6038 5.230942 GGGATATCGTCTGTTTGGATGTAG 58.769 45.833 0.00 0.00 0.00 2.74
3267 6039 5.221461 GGGATATCGTCTGTTTGGATGTAGT 60.221 44.000 0.00 0.00 0.00 2.73
3268 6040 6.015688 GGGATATCGTCTGTTTGGATGTAGTA 60.016 42.308 0.00 0.00 0.00 1.82
3320 6092 2.030185 TCGGTTAGCACTCAGTCTGTTC 60.030 50.000 0.00 0.00 0.00 3.18
3321 6093 2.288213 CGGTTAGCACTCAGTCTGTTCA 60.288 50.000 0.00 0.00 0.00 3.18
3338 6110 7.891183 TCTGTTCAAGACTTGTAGAATTAGC 57.109 36.000 14.75 0.00 0.00 3.09
3354 6126 0.601057 TAGCTGTTAGCACGCTGTCA 59.399 50.000 0.72 0.17 45.56 3.58
3357 6129 2.159043 AGCTGTTAGCACGCTGTCATAT 60.159 45.455 0.72 0.00 45.56 1.78
3360 6132 4.783450 GCTGTTAGCACGCTGTCATATTTC 60.783 45.833 0.72 0.00 41.89 2.17
3361 6133 4.249661 TGTTAGCACGCTGTCATATTTCA 58.750 39.130 0.72 0.00 0.00 2.69
3362 6134 4.329801 TGTTAGCACGCTGTCATATTTCAG 59.670 41.667 0.72 0.00 35.12 3.02
3411 6183 4.514441 AGCACTCAATCTGTTTCAGACTTG 59.486 41.667 1.44 8.06 43.63 3.16
3423 6195 7.600375 TCTGTTTCAGACTTGTAGAATTAGCTG 59.400 37.037 0.00 0.00 35.39 4.24
3430 6202 6.814146 AGACTTGTAGAATTAGCTGTTAGCAC 59.186 38.462 0.00 0.00 45.56 4.40
3468 6240 4.155709 TCTCTCTTGAATGAGGACACTGT 58.844 43.478 0.00 0.00 34.98 3.55
3550 6322 5.299279 CACTGACCATTGGTTCTACTTTGTT 59.701 40.000 10.29 0.00 35.25 2.83
3698 6470 4.813161 CAGCTTCCTGTGAACATATAGTGG 59.187 45.833 0.00 0.00 34.31 4.00
3705 6477 4.905429 TGTGAACATATAGTGGCACAAGT 58.095 39.130 21.41 7.51 44.16 3.16
3724 6496 1.208293 GTAGCCTGGCAGCTAACTCTT 59.792 52.381 22.65 0.00 46.52 2.85
3741 6513 5.180810 ACTCTTCCTTTTAATCTCCCACC 57.819 43.478 0.00 0.00 0.00 4.61
3743 6515 5.179452 TCTTCCTTTTAATCTCCCACCTG 57.821 43.478 0.00 0.00 0.00 4.00
3744 6516 4.601857 TCTTCCTTTTAATCTCCCACCTGT 59.398 41.667 0.00 0.00 0.00 4.00
3745 6517 5.074515 TCTTCCTTTTAATCTCCCACCTGTT 59.925 40.000 0.00 0.00 0.00 3.16
3746 6518 6.273730 TCTTCCTTTTAATCTCCCACCTGTTA 59.726 38.462 0.00 0.00 0.00 2.41
3747 6519 6.457159 TCCTTTTAATCTCCCACCTGTTAA 57.543 37.500 0.00 0.00 0.00 2.01
3748 6520 6.243148 TCCTTTTAATCTCCCACCTGTTAAC 58.757 40.000 0.00 0.00 0.00 2.01
3749 6521 5.417894 CCTTTTAATCTCCCACCTGTTAACC 59.582 44.000 2.48 0.00 0.00 2.85
3750 6522 5.853572 TTTAATCTCCCACCTGTTAACCT 57.146 39.130 2.48 0.00 0.00 3.50
3751 6523 3.721087 AATCTCCCACCTGTTAACCTG 57.279 47.619 2.48 0.00 0.00 4.00
3754 6526 3.589641 TCTCCCACCTGTTAACCTGTTA 58.410 45.455 2.48 0.00 0.00 2.41
3781 6553 4.408921 TCTCATGGACATTACCCAAGGTAG 59.591 45.833 0.00 0.00 39.52 3.18
3809 6581 1.340991 CGGTCAAAATGGGGTCATCCT 60.341 52.381 0.00 0.00 35.33 3.24
3820 6592 1.821136 GGGTCATCCTTTGCCTTCAAG 59.179 52.381 0.00 0.00 33.12 3.02
3850 6623 4.980434 GGACATTACTTAAAGCGCGAGATA 59.020 41.667 12.10 0.00 0.00 1.98
3851 6624 5.634020 GGACATTACTTAAAGCGCGAGATAT 59.366 40.000 12.10 0.00 0.00 1.63
3853 6626 7.488471 GGACATTACTTAAAGCGCGAGATATAT 59.512 37.037 12.10 0.00 0.00 0.86
3854 6627 8.758633 ACATTACTTAAAGCGCGAGATATATT 57.241 30.769 12.10 0.00 0.00 1.28
3855 6628 8.648097 ACATTACTTAAAGCGCGAGATATATTG 58.352 33.333 12.10 2.36 0.00 1.90
3856 6629 8.860128 CATTACTTAAAGCGCGAGATATATTGA 58.140 33.333 12.10 0.00 0.00 2.57
3857 6630 8.806177 TTACTTAAAGCGCGAGATATATTGAA 57.194 30.769 12.10 0.00 0.00 2.69
3858 6631 7.106663 ACTTAAAGCGCGAGATATATTGAAC 57.893 36.000 12.10 0.00 0.00 3.18
3859 6632 6.924060 ACTTAAAGCGCGAGATATATTGAACT 59.076 34.615 12.10 0.00 0.00 3.01
3860 6633 5.582439 AAAGCGCGAGATATATTGAACTG 57.418 39.130 12.10 0.00 0.00 3.16
3861 6634 3.579709 AGCGCGAGATATATTGAACTGG 58.420 45.455 12.10 0.00 0.00 4.00
3862 6635 3.005897 AGCGCGAGATATATTGAACTGGT 59.994 43.478 12.10 0.00 0.00 4.00
3863 6636 3.365220 GCGCGAGATATATTGAACTGGTC 59.635 47.826 12.10 0.00 0.00 4.02
3864 6637 4.546570 CGCGAGATATATTGAACTGGTCA 58.453 43.478 0.00 0.00 0.00 4.02
3865 6638 5.164233 CGCGAGATATATTGAACTGGTCAT 58.836 41.667 0.00 0.00 35.70 3.06
3866 6639 6.322491 CGCGAGATATATTGAACTGGTCATA 58.678 40.000 0.00 0.00 35.70 2.15
3867 6640 6.806739 CGCGAGATATATTGAACTGGTCATAA 59.193 38.462 0.00 0.00 35.70 1.90
3868 6641 7.008719 CGCGAGATATATTGAACTGGTCATAAG 59.991 40.741 0.00 0.00 35.70 1.73
3869 6642 7.201478 GCGAGATATATTGAACTGGTCATAAGC 60.201 40.741 0.00 0.00 35.70 3.09
3870 6643 8.031864 CGAGATATATTGAACTGGTCATAAGCT 58.968 37.037 0.00 0.00 35.70 3.74
3876 6649 6.985188 TTGAACTGGTCATAAGCTATTGTC 57.015 37.500 0.00 0.00 35.70 3.18
3877 6650 6.299805 TGAACTGGTCATAAGCTATTGTCT 57.700 37.500 0.00 0.00 0.00 3.41
3878 6651 6.108687 TGAACTGGTCATAAGCTATTGTCTG 58.891 40.000 0.00 0.00 0.00 3.51
3879 6652 5.683876 ACTGGTCATAAGCTATTGTCTGT 57.316 39.130 0.00 0.00 0.00 3.41
3880 6653 5.423015 ACTGGTCATAAGCTATTGTCTGTG 58.577 41.667 0.00 0.00 0.00 3.66
3881 6654 5.046304 ACTGGTCATAAGCTATTGTCTGTGT 60.046 40.000 0.00 0.00 0.00 3.72
3882 6655 5.178061 TGGTCATAAGCTATTGTCTGTGTG 58.822 41.667 0.00 0.00 0.00 3.82
3883 6656 5.178797 GGTCATAAGCTATTGTCTGTGTGT 58.821 41.667 0.00 0.00 0.00 3.72
3884 6657 6.071051 TGGTCATAAGCTATTGTCTGTGTGTA 60.071 38.462 0.00 0.00 0.00 2.90
3885 6658 6.816640 GGTCATAAGCTATTGTCTGTGTGTAA 59.183 38.462 0.00 0.00 0.00 2.41
3886 6659 7.495934 GGTCATAAGCTATTGTCTGTGTGTAAT 59.504 37.037 0.00 0.00 0.00 1.89
3887 6660 9.529325 GTCATAAGCTATTGTCTGTGTGTAATA 57.471 33.333 0.00 0.00 0.00 0.98
3890 6663 7.849804 AAGCTATTGTCTGTGTGTAATAAGG 57.150 36.000 0.00 0.00 0.00 2.69
3894 6679 7.762615 GCTATTGTCTGTGTGTAATAAGGTGTA 59.237 37.037 0.00 0.00 0.00 2.90
3897 6682 6.218019 TGTCTGTGTGTAATAAGGTGTACAC 58.782 40.000 18.01 18.01 46.73 2.90
3924 6709 0.893447 AAGTACGGTGGCCTCACTAC 59.107 55.000 3.32 3.70 43.17 2.73
3931 6716 0.690762 GTGGCCTCACTACCTTCCAA 59.309 55.000 3.32 0.00 40.58 3.53
3932 6717 0.984230 TGGCCTCACTACCTTCCAAG 59.016 55.000 3.32 0.00 0.00 3.61
3970 10613 6.625873 AAACAGAGCTGCTAATTATTAGGC 57.374 37.500 13.14 9.04 33.80 3.93
3971 10614 5.559148 ACAGAGCTGCTAATTATTAGGCT 57.441 39.130 13.14 13.09 34.73 4.58
3973 10616 5.070981 ACAGAGCTGCTAATTATTAGGCTCA 59.929 40.000 28.09 14.13 43.77 4.26
3974 10617 6.171921 CAGAGCTGCTAATTATTAGGCTCAT 58.828 40.000 28.09 18.07 43.77 2.90
4016 10669 2.612212 TCTTCTCTTCACAAAACGCCAC 59.388 45.455 0.00 0.00 0.00 5.01
4017 10670 2.325583 TCTCTTCACAAAACGCCACT 57.674 45.000 0.00 0.00 0.00 4.00
4018 10671 3.462483 TCTCTTCACAAAACGCCACTA 57.538 42.857 0.00 0.00 0.00 2.74
4019 10672 4.002906 TCTCTTCACAAAACGCCACTAT 57.997 40.909 0.00 0.00 0.00 2.12
4020 10673 4.385825 TCTCTTCACAAAACGCCACTATT 58.614 39.130 0.00 0.00 0.00 1.73
4021 10674 4.819630 TCTCTTCACAAAACGCCACTATTT 59.180 37.500 0.00 0.00 0.00 1.40
4037 10690 7.420800 GCCACTATTTCTATTTGTCAATCAGG 58.579 38.462 0.00 0.00 0.00 3.86
4038 10691 7.420800 CCACTATTTCTATTTGTCAATCAGGC 58.579 38.462 0.00 0.00 0.00 4.85
4046 10699 1.745489 GTCAATCAGGCCGACACCC 60.745 63.158 0.00 0.00 0.00 4.61
4056 10709 1.966451 CCGACACCCAACTCCAAGC 60.966 63.158 0.00 0.00 0.00 4.01
4058 10711 1.603739 GACACCCAACTCCAAGCCC 60.604 63.158 0.00 0.00 0.00 5.19
4071 10725 0.453390 CAAGCCCGGCTGAGAAATTC 59.547 55.000 14.19 0.00 39.62 2.17
4126 10780 0.878416 TTCCGCAAATACGCAAAGCT 59.122 45.000 0.00 0.00 0.00 3.74
4129 10783 1.400888 CCGCAAATACGCAAAGCTTCA 60.401 47.619 0.00 0.00 0.00 3.02
4177 10831 6.365970 AGAGAATGAGTACAAAGTGATGGT 57.634 37.500 0.00 0.00 0.00 3.55
4211 10865 3.122150 TCGCAAGATGGAGTGAACG 57.878 52.632 0.00 0.00 45.01 3.95
4257 10911 2.930562 AGAAGGGTTGCTCGGCCT 60.931 61.111 0.00 0.00 0.00 5.19
4275 10929 2.874849 CCTGAACAAACACACAACACC 58.125 47.619 0.00 0.00 0.00 4.16
4404 11058 7.128077 ACATGGGATGAAGGAGACAATATTTT 58.872 34.615 0.00 0.00 0.00 1.82
4416 11070 2.758423 ACAATATTTTCCCAGGTTCGGC 59.242 45.455 0.00 0.00 0.00 5.54
4477 11131 7.495279 TGATTGTGTTGATGATGATGTATCGAA 59.505 33.333 0.00 0.00 38.71 3.71
4548 11202 6.294361 TGCTAGGTGTATGTAGTTGTGATT 57.706 37.500 0.00 0.00 0.00 2.57
4607 11261 2.168458 TCCTACGTTCATCCCCATGA 57.832 50.000 0.00 0.00 37.24 3.07
4613 11267 3.594453 TTCATCCCCATGAACCTGC 57.406 52.632 0.00 0.00 42.99 4.85
4617 11271 1.426598 CATCCCCATGAACCTGCCTAT 59.573 52.381 0.00 0.00 30.57 2.57
4622 11276 2.486191 CCCATGAACCTGCCTATGTCTC 60.486 54.545 0.00 0.00 0.00 3.36
4664 11318 4.749310 CAAGAGCTCGTGCCCGCT 62.749 66.667 16.75 0.00 40.80 5.52
4695 11349 2.034053 CCTATGTGAACTCGCTCCTCTC 59.966 54.545 0.00 0.00 0.00 3.20
4742 11397 3.055094 ACATGGCTACTAACTCAACCAGG 60.055 47.826 0.00 0.00 35.23 4.45
4749 11404 2.372172 ACTAACTCAACCAGGGACCTTG 59.628 50.000 0.00 0.00 0.00 3.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 9.686683 AGAACTTTCACTACTGCCAAATTATAT 57.313 29.630 0.00 0.00 0.00 0.86
10 11 8.946085 CAGAACTTTCACTACTGCCAAATTATA 58.054 33.333 0.00 0.00 0.00 0.98
11 12 7.448469 ACAGAACTTTCACTACTGCCAAATTAT 59.552 33.333 0.00 0.00 32.67 1.28
12 13 6.770785 ACAGAACTTTCACTACTGCCAAATTA 59.229 34.615 0.00 0.00 32.67 1.40
13 14 5.594317 ACAGAACTTTCACTACTGCCAAATT 59.406 36.000 0.00 0.00 32.67 1.82
14 15 5.133221 ACAGAACTTTCACTACTGCCAAAT 58.867 37.500 0.00 0.00 32.67 2.32
15 16 4.523083 ACAGAACTTTCACTACTGCCAAA 58.477 39.130 0.00 0.00 32.67 3.28
16 17 4.150897 ACAGAACTTTCACTACTGCCAA 57.849 40.909 0.00 0.00 32.67 4.52
17 18 3.838244 ACAGAACTTTCACTACTGCCA 57.162 42.857 0.00 0.00 32.67 4.92
18 19 4.127171 TGAACAGAACTTTCACTACTGCC 58.873 43.478 0.00 0.00 32.67 4.85
19 20 5.734855 TTGAACAGAACTTTCACTACTGC 57.265 39.130 0.00 0.00 32.65 4.40
20 21 7.919690 TCATTTGAACAGAACTTTCACTACTG 58.080 34.615 0.00 0.00 32.65 2.74
21 22 8.682936 ATCATTTGAACAGAACTTTCACTACT 57.317 30.769 0.00 0.00 32.65 2.57
41 42 9.143155 GGGGTGTATTTGGTTCTTAATATCATT 57.857 33.333 0.00 0.00 0.00 2.57
42 43 7.447238 CGGGGTGTATTTGGTTCTTAATATCAT 59.553 37.037 0.00 0.00 0.00 2.45
43 44 6.768861 CGGGGTGTATTTGGTTCTTAATATCA 59.231 38.462 0.00 0.00 0.00 2.15
44 45 6.993902 TCGGGGTGTATTTGGTTCTTAATATC 59.006 38.462 0.00 0.00 0.00 1.63
45 46 6.902408 TCGGGGTGTATTTGGTTCTTAATAT 58.098 36.000 0.00 0.00 0.00 1.28
46 47 6.310764 TCGGGGTGTATTTGGTTCTTAATA 57.689 37.500 0.00 0.00 0.00 0.98
47 48 5.182169 TCGGGGTGTATTTGGTTCTTAAT 57.818 39.130 0.00 0.00 0.00 1.40
48 49 4.637387 TCGGGGTGTATTTGGTTCTTAA 57.363 40.909 0.00 0.00 0.00 1.85
49 50 4.286549 TCTTCGGGGTGTATTTGGTTCTTA 59.713 41.667 0.00 0.00 0.00 2.10
50 51 3.073356 TCTTCGGGGTGTATTTGGTTCTT 59.927 43.478 0.00 0.00 0.00 2.52
51 52 2.640826 TCTTCGGGGTGTATTTGGTTCT 59.359 45.455 0.00 0.00 0.00 3.01
52 53 3.007635 CTCTTCGGGGTGTATTTGGTTC 58.992 50.000 0.00 0.00 0.00 3.62
53 54 2.640826 TCTCTTCGGGGTGTATTTGGTT 59.359 45.455 0.00 0.00 0.00 3.67
54 55 2.262637 TCTCTTCGGGGTGTATTTGGT 58.737 47.619 0.00 0.00 0.00 3.67
55 56 3.270877 CTTCTCTTCGGGGTGTATTTGG 58.729 50.000 0.00 0.00 0.00 3.28
56 57 3.939066 ACTTCTCTTCGGGGTGTATTTG 58.061 45.455 0.00 0.00 0.00 2.32
57 58 5.750352 TTACTTCTCTTCGGGGTGTATTT 57.250 39.130 0.00 0.00 0.00 1.40
58 59 5.750352 TTTACTTCTCTTCGGGGTGTATT 57.250 39.130 0.00 0.00 0.00 1.89
59 60 5.750352 TTTTACTTCTCTTCGGGGTGTAT 57.250 39.130 0.00 0.00 0.00 2.29
60 61 5.012354 ACATTTTACTTCTCTTCGGGGTGTA 59.988 40.000 0.00 0.00 0.00 2.90
61 62 4.202430 ACATTTTACTTCTCTTCGGGGTGT 60.202 41.667 0.00 0.00 0.00 4.16
62 63 4.324267 ACATTTTACTTCTCTTCGGGGTG 58.676 43.478 0.00 0.00 0.00 4.61
63 64 4.635699 ACATTTTACTTCTCTTCGGGGT 57.364 40.909 0.00 0.00 0.00 4.95
64 65 5.335661 CCAAACATTTTACTTCTCTTCGGGG 60.336 44.000 0.00 0.00 0.00 5.73
65 66 5.240844 ACCAAACATTTTACTTCTCTTCGGG 59.759 40.000 0.00 0.00 0.00 5.14
66 67 6.313744 ACCAAACATTTTACTTCTCTTCGG 57.686 37.500 0.00 0.00 0.00 4.30
67 68 7.193595 ACAACCAAACATTTTACTTCTCTTCG 58.806 34.615 0.00 0.00 0.00 3.79
68 69 8.926715 AACAACCAAACATTTTACTTCTCTTC 57.073 30.769 0.00 0.00 0.00 2.87
69 70 9.150348 CAAACAACCAAACATTTTACTTCTCTT 57.850 29.630 0.00 0.00 0.00 2.85
70 71 7.277760 GCAAACAACCAAACATTTTACTTCTCT 59.722 33.333 0.00 0.00 0.00 3.10
71 72 7.064016 TGCAAACAACCAAACATTTTACTTCTC 59.936 33.333 0.00 0.00 0.00 2.87
72 73 6.876257 TGCAAACAACCAAACATTTTACTTCT 59.124 30.769 0.00 0.00 0.00 2.85
73 74 7.066374 TGCAAACAACCAAACATTTTACTTC 57.934 32.000 0.00 0.00 0.00 3.01
74 75 7.440523 TTGCAAACAACCAAACATTTTACTT 57.559 28.000 0.00 0.00 0.00 2.24
75 76 7.622893 ATTGCAAACAACCAAACATTTTACT 57.377 28.000 1.71 0.00 38.99 2.24
76 77 7.965107 TCAATTGCAAACAACCAAACATTTTAC 59.035 29.630 1.71 0.00 38.99 2.01
77 78 8.044060 TCAATTGCAAACAACCAAACATTTTA 57.956 26.923 1.71 0.00 38.99 1.52
78 79 6.917533 TCAATTGCAAACAACCAAACATTTT 58.082 28.000 1.71 0.00 38.99 1.82
79 80 6.150809 ACTCAATTGCAAACAACCAAACATTT 59.849 30.769 1.71 0.00 38.99 2.32
80 81 5.647225 ACTCAATTGCAAACAACCAAACATT 59.353 32.000 1.71 0.00 38.99 2.71
81 82 5.184711 ACTCAATTGCAAACAACCAAACAT 58.815 33.333 1.71 0.00 38.99 2.71
82 83 4.573900 ACTCAATTGCAAACAACCAAACA 58.426 34.783 1.71 0.00 38.99 2.83
83 84 5.121454 TCAACTCAATTGCAAACAACCAAAC 59.879 36.000 1.71 0.00 38.99 2.93
84 85 5.121454 GTCAACTCAATTGCAAACAACCAAA 59.879 36.000 1.71 0.00 38.99 3.28
85 86 4.629200 GTCAACTCAATTGCAAACAACCAA 59.371 37.500 1.71 0.00 38.99 3.67
86 87 4.180057 GTCAACTCAATTGCAAACAACCA 58.820 39.130 1.71 0.00 38.99 3.67
87 88 3.555547 GGTCAACTCAATTGCAAACAACC 59.444 43.478 1.71 0.00 38.99 3.77
88 89 4.180057 TGGTCAACTCAATTGCAAACAAC 58.820 39.130 1.71 0.00 38.99 3.32
89 90 4.462508 TGGTCAACTCAATTGCAAACAA 57.537 36.364 1.71 0.00 40.87 2.83
90 91 4.462508 TTGGTCAACTCAATTGCAAACA 57.537 36.364 1.71 0.00 38.29 2.83
91 92 5.049167 TCATTGGTCAACTCAATTGCAAAC 58.951 37.500 1.71 0.00 38.29 2.93
92 93 5.273674 TCATTGGTCAACTCAATTGCAAA 57.726 34.783 1.71 0.00 38.29 3.68
93 94 4.933505 TCATTGGTCAACTCAATTGCAA 57.066 36.364 0.00 0.00 38.29 4.08
94 95 4.523558 TGATCATTGGTCAACTCAATTGCA 59.476 37.500 0.00 0.00 38.29 4.08
95 96 5.063180 TGATCATTGGTCAACTCAATTGC 57.937 39.130 0.00 0.00 38.29 3.56
96 97 9.811995 AATTATGATCATTGGTCAACTCAATTG 57.188 29.630 14.65 0.00 39.94 2.32
122 123 8.068892 TGCTGAACCCTTTAGTTTAAGAAAAA 57.931 30.769 0.00 0.00 0.00 1.94
123 124 7.648039 TGCTGAACCCTTTAGTTTAAGAAAA 57.352 32.000 0.00 0.00 0.00 2.29
124 125 7.833285 ATGCTGAACCCTTTAGTTTAAGAAA 57.167 32.000 0.00 0.00 0.00 2.52
125 126 7.724061 AGAATGCTGAACCCTTTAGTTTAAGAA 59.276 33.333 0.00 0.00 0.00 2.52
126 127 7.231467 AGAATGCTGAACCCTTTAGTTTAAGA 58.769 34.615 0.00 0.00 0.00 2.10
127 128 7.454260 AGAATGCTGAACCCTTTAGTTTAAG 57.546 36.000 0.00 0.00 0.00 1.85
128 129 8.927675 TTAGAATGCTGAACCCTTTAGTTTAA 57.072 30.769 0.00 0.00 0.00 1.52
129 130 8.927675 TTTAGAATGCTGAACCCTTTAGTTTA 57.072 30.769 0.00 0.00 0.00 2.01
130 131 7.833285 TTTAGAATGCTGAACCCTTTAGTTT 57.167 32.000 0.00 0.00 0.00 2.66
131 132 7.093771 CCATTTAGAATGCTGAACCCTTTAGTT 60.094 37.037 0.00 0.00 0.00 2.24
132 133 6.378280 CCATTTAGAATGCTGAACCCTTTAGT 59.622 38.462 0.00 0.00 0.00 2.24
133 134 6.681368 GCCATTTAGAATGCTGAACCCTTTAG 60.681 42.308 0.00 0.00 0.00 1.85
134 135 5.127031 GCCATTTAGAATGCTGAACCCTTTA 59.873 40.000 0.00 0.00 0.00 1.85
135 136 4.081476 GCCATTTAGAATGCTGAACCCTTT 60.081 41.667 0.00 0.00 0.00 3.11
136 137 3.448660 GCCATTTAGAATGCTGAACCCTT 59.551 43.478 0.00 0.00 0.00 3.95
137 138 3.026694 GCCATTTAGAATGCTGAACCCT 58.973 45.455 0.00 0.00 0.00 4.34
138 139 2.223572 CGCCATTTAGAATGCTGAACCC 60.224 50.000 0.00 0.00 0.00 4.11
139 140 2.682856 TCGCCATTTAGAATGCTGAACC 59.317 45.455 0.00 0.00 0.00 3.62
140 141 4.558538 ATCGCCATTTAGAATGCTGAAC 57.441 40.909 0.00 0.00 0.00 3.18
141 142 5.122519 TGTATCGCCATTTAGAATGCTGAA 58.877 37.500 0.00 0.00 0.00 3.02
142 143 4.702831 TGTATCGCCATTTAGAATGCTGA 58.297 39.130 0.00 0.00 0.00 4.26
143 144 5.618056 ATGTATCGCCATTTAGAATGCTG 57.382 39.130 0.00 0.00 0.00 4.41
144 145 7.391554 ACATAATGTATCGCCATTTAGAATGCT 59.608 33.333 0.00 0.00 36.48 3.79
145 146 7.482743 CACATAATGTATCGCCATTTAGAATGC 59.517 37.037 0.00 0.00 36.48 3.56
146 147 8.506437 ACACATAATGTATCGCCATTTAGAATG 58.494 33.333 0.00 0.00 40.88 2.67
147 148 8.621532 ACACATAATGTATCGCCATTTAGAAT 57.378 30.769 0.00 0.00 40.88 2.40
148 149 9.203421 CTACACATAATGTATCGCCATTTAGAA 57.797 33.333 0.00 0.00 43.01 2.10
149 150 8.581578 TCTACACATAATGTATCGCCATTTAGA 58.418 33.333 0.00 0.00 43.01 2.10
150 151 8.757164 TCTACACATAATGTATCGCCATTTAG 57.243 34.615 0.00 0.00 43.01 1.85
152 153 9.890629 ATATCTACACATAATGTATCGCCATTT 57.109 29.630 0.00 0.00 43.01 2.32
153 154 9.317936 CATATCTACACATAATGTATCGCCATT 57.682 33.333 0.00 0.00 43.01 3.16
154 155 7.439356 GCATATCTACACATAATGTATCGCCAT 59.561 37.037 0.00 0.00 43.01 4.40
155 156 6.756542 GCATATCTACACATAATGTATCGCCA 59.243 38.462 0.00 0.00 43.01 5.69
156 157 6.201044 GGCATATCTACACATAATGTATCGCC 59.799 42.308 0.00 0.00 43.01 5.54
157 158 6.074835 CGGCATATCTACACATAATGTATCGC 60.075 42.308 0.00 0.00 43.01 4.58
158 159 7.193595 TCGGCATATCTACACATAATGTATCG 58.806 38.462 0.00 0.00 43.01 2.92
159 160 8.972349 CATCGGCATATCTACACATAATGTATC 58.028 37.037 0.00 0.00 43.01 2.24
160 161 8.478066 ACATCGGCATATCTACACATAATGTAT 58.522 33.333 0.00 0.00 43.01 2.29
161 162 7.759433 CACATCGGCATATCTACACATAATGTA 59.241 37.037 0.00 0.00 43.19 2.29
162 163 6.591448 CACATCGGCATATCTACACATAATGT 59.409 38.462 0.00 0.00 46.06 2.71
163 164 6.036408 CCACATCGGCATATCTACACATAATG 59.964 42.308 0.00 0.00 0.00 1.90
164 165 6.070824 TCCACATCGGCATATCTACACATAAT 60.071 38.462 0.00 0.00 33.14 1.28
165 166 5.245075 TCCACATCGGCATATCTACACATAA 59.755 40.000 0.00 0.00 33.14 1.90
166 167 4.770010 TCCACATCGGCATATCTACACATA 59.230 41.667 0.00 0.00 33.14 2.29
167 168 3.578282 TCCACATCGGCATATCTACACAT 59.422 43.478 0.00 0.00 33.14 3.21
168 169 2.962421 TCCACATCGGCATATCTACACA 59.038 45.455 0.00 0.00 33.14 3.72
169 170 3.005897 ACTCCACATCGGCATATCTACAC 59.994 47.826 0.00 0.00 33.14 2.90
170 171 3.230976 ACTCCACATCGGCATATCTACA 58.769 45.455 0.00 0.00 33.14 2.74
171 172 3.944055 ACTCCACATCGGCATATCTAC 57.056 47.619 0.00 0.00 33.14 2.59
172 173 3.554960 GCAACTCCACATCGGCATATCTA 60.555 47.826 0.00 0.00 33.14 1.98
173 174 2.808202 GCAACTCCACATCGGCATATCT 60.808 50.000 0.00 0.00 33.14 1.98
174 175 1.532868 GCAACTCCACATCGGCATATC 59.467 52.381 0.00 0.00 33.14 1.63
175 176 1.141657 AGCAACTCCACATCGGCATAT 59.858 47.619 0.00 0.00 33.14 1.78
176 177 0.541392 AGCAACTCCACATCGGCATA 59.459 50.000 0.00 0.00 33.14 3.14
177 178 0.322816 AAGCAACTCCACATCGGCAT 60.323 50.000 0.00 0.00 33.14 4.40
178 179 0.323302 TAAGCAACTCCACATCGGCA 59.677 50.000 0.00 0.00 33.14 5.69
179 180 1.448985 TTAAGCAACTCCACATCGGC 58.551 50.000 0.00 0.00 33.14 5.54
180 181 4.082787 ACAAATTAAGCAACTCCACATCGG 60.083 41.667 0.00 0.00 0.00 4.18
181 182 5.046910 ACAAATTAAGCAACTCCACATCG 57.953 39.130 0.00 0.00 0.00 3.84
182 183 8.986477 AATAACAAATTAAGCAACTCCACATC 57.014 30.769 0.00 0.00 0.00 3.06
183 184 9.777297 AAAATAACAAATTAAGCAACTCCACAT 57.223 25.926 0.00 0.00 0.00 3.21
184 185 9.606631 AAAAATAACAAATTAAGCAACTCCACA 57.393 25.926 0.00 0.00 0.00 4.17
185 186 9.862585 CAAAAATAACAAATTAAGCAACTCCAC 57.137 29.630 0.00 0.00 0.00 4.02
186 187 9.606631 ACAAAAATAACAAATTAAGCAACTCCA 57.393 25.926 0.00 0.00 0.00 3.86
187 188 9.862585 CACAAAAATAACAAATTAAGCAACTCC 57.137 29.630 0.00 0.00 0.00 3.85
204 205 8.238631 GCCCGACTAAAGAAATACACAAAAATA 58.761 33.333 0.00 0.00 0.00 1.40
205 206 7.088272 GCCCGACTAAAGAAATACACAAAAAT 58.912 34.615 0.00 0.00 0.00 1.82
206 207 6.039493 TGCCCGACTAAAGAAATACACAAAAA 59.961 34.615 0.00 0.00 0.00 1.94
207 208 5.531659 TGCCCGACTAAAGAAATACACAAAA 59.468 36.000 0.00 0.00 0.00 2.44
208 209 5.064558 TGCCCGACTAAAGAAATACACAAA 58.935 37.500 0.00 0.00 0.00 2.83
209 210 4.643463 TGCCCGACTAAAGAAATACACAA 58.357 39.130 0.00 0.00 0.00 3.33
210 211 4.274602 TGCCCGACTAAAGAAATACACA 57.725 40.909 0.00 0.00 0.00 3.72
211 212 4.025979 CGATGCCCGACTAAAGAAATACAC 60.026 45.833 0.00 0.00 41.76 2.90
212 213 4.116961 CGATGCCCGACTAAAGAAATACA 58.883 43.478 0.00 0.00 41.76 2.29
213 214 4.365723 TCGATGCCCGACTAAAGAAATAC 58.634 43.478 0.00 0.00 43.23 1.89
214 215 4.659111 TCGATGCCCGACTAAAGAAATA 57.341 40.909 0.00 0.00 43.23 1.40
215 216 3.536956 TCGATGCCCGACTAAAGAAAT 57.463 42.857 0.00 0.00 43.23 2.17
226 227 1.660607 GCATATACACATCGATGCCCG 59.339 52.381 25.11 15.77 39.00 6.13
227 228 2.977914 AGCATATACACATCGATGCCC 58.022 47.619 25.11 4.95 44.65 5.36
228 229 4.568359 CCTAAGCATATACACATCGATGCC 59.432 45.833 25.11 3.97 44.65 4.40
229 230 4.568359 CCCTAAGCATATACACATCGATGC 59.432 45.833 25.11 10.31 44.05 3.91
230 231 5.724328 ACCCTAAGCATATACACATCGATG 58.276 41.667 23.68 23.68 0.00 3.84
231 232 7.396339 TCTTACCCTAAGCATATACACATCGAT 59.604 37.037 0.00 0.00 35.76 3.59
232 233 6.717997 TCTTACCCTAAGCATATACACATCGA 59.282 38.462 0.00 0.00 35.76 3.59
233 234 6.920817 TCTTACCCTAAGCATATACACATCG 58.079 40.000 0.00 0.00 35.76 3.84
234 235 8.531982 TCATCTTACCCTAAGCATATACACATC 58.468 37.037 0.00 0.00 35.76 3.06
235 236 8.435931 TCATCTTACCCTAAGCATATACACAT 57.564 34.615 0.00 0.00 35.76 3.21
236 237 7.849322 TCATCTTACCCTAAGCATATACACA 57.151 36.000 0.00 0.00 35.76 3.72
237 238 7.278868 GCATCATCTTACCCTAAGCATATACAC 59.721 40.741 0.00 0.00 35.76 2.90
238 239 7.331026 GCATCATCTTACCCTAAGCATATACA 58.669 38.462 0.00 0.00 35.76 2.29
239 240 6.763610 GGCATCATCTTACCCTAAGCATATAC 59.236 42.308 0.00 0.00 35.76 1.47
240 241 6.673978 AGGCATCATCTTACCCTAAGCATATA 59.326 38.462 0.00 0.00 35.76 0.86
241 242 5.490357 AGGCATCATCTTACCCTAAGCATAT 59.510 40.000 0.00 0.00 35.76 1.78
242 243 4.846367 AGGCATCATCTTACCCTAAGCATA 59.154 41.667 0.00 0.00 35.76 3.14
243 244 3.654806 AGGCATCATCTTACCCTAAGCAT 59.345 43.478 0.00 0.00 35.76 3.79
244 245 3.048600 AGGCATCATCTTACCCTAAGCA 58.951 45.455 0.00 0.00 35.76 3.91
245 246 3.326297 AGAGGCATCATCTTACCCTAAGC 59.674 47.826 0.00 0.00 35.76 3.09
246 247 4.346418 ACAGAGGCATCATCTTACCCTAAG 59.654 45.833 0.00 0.00 37.13 2.18
247 248 4.298626 ACAGAGGCATCATCTTACCCTAA 58.701 43.478 0.00 0.00 0.00 2.69
248 249 3.928754 ACAGAGGCATCATCTTACCCTA 58.071 45.455 0.00 0.00 0.00 3.53
249 250 2.769209 ACAGAGGCATCATCTTACCCT 58.231 47.619 0.00 0.00 0.00 4.34
250 251 3.135530 AGAACAGAGGCATCATCTTACCC 59.864 47.826 0.00 0.00 0.00 3.69
251 252 4.125703 CAGAACAGAGGCATCATCTTACC 58.874 47.826 0.00 0.00 0.00 2.85
252 253 4.764172 ACAGAACAGAGGCATCATCTTAC 58.236 43.478 0.00 0.00 0.00 2.34
253 254 5.426689 AACAGAACAGAGGCATCATCTTA 57.573 39.130 0.00 0.00 0.00 2.10
254 255 3.996921 ACAGAACAGAGGCATCATCTT 57.003 42.857 0.00 0.00 0.00 2.40
255 256 3.996921 AACAGAACAGAGGCATCATCT 57.003 42.857 0.00 0.00 0.00 2.90
256 257 6.520272 AGTATAACAGAACAGAGGCATCATC 58.480 40.000 0.00 0.00 0.00 2.92
257 258 6.491714 AGTATAACAGAACAGAGGCATCAT 57.508 37.500 0.00 0.00 0.00 2.45
258 259 5.939764 AGTATAACAGAACAGAGGCATCA 57.060 39.130 0.00 0.00 0.00 3.07
259 260 7.661968 TGATAGTATAACAGAACAGAGGCATC 58.338 38.462 0.00 0.00 0.00 3.91
260 261 7.603180 TGATAGTATAACAGAACAGAGGCAT 57.397 36.000 0.00 0.00 0.00 4.40
261 262 7.418337 TTGATAGTATAACAGAACAGAGGCA 57.582 36.000 0.00 0.00 0.00 4.75
262 263 7.928706 ACATTGATAGTATAACAGAACAGAGGC 59.071 37.037 0.00 0.00 0.00 4.70
263 264 9.254133 CACATTGATAGTATAACAGAACAGAGG 57.746 37.037 0.00 0.00 0.00 3.69
264 265 9.809096 ACACATTGATAGTATAACAGAACAGAG 57.191 33.333 0.00 0.00 0.00 3.35
267 268 9.936759 TCAACACATTGATAGTATAACAGAACA 57.063 29.630 0.00 0.00 40.01 3.18
269 270 9.936759 TGTCAACACATTGATAGTATAACAGAA 57.063 29.630 0.00 0.00 46.43 3.02
270 271 9.936759 TTGTCAACACATTGATAGTATAACAGA 57.063 29.630 0.00 0.00 46.43 3.41
277 278 9.161629 CCTAACATTGTCAACACATTGATAGTA 57.838 33.333 10.70 0.00 46.43 1.82
278 279 7.362056 GCCTAACATTGTCAACACATTGATAGT 60.362 37.037 10.70 0.00 46.43 2.12
279 280 6.968904 GCCTAACATTGTCAACACATTGATAG 59.031 38.462 4.47 5.94 46.43 2.08
280 281 6.432472 TGCCTAACATTGTCAACACATTGATA 59.568 34.615 4.47 0.00 46.43 2.15
281 282 5.243507 TGCCTAACATTGTCAACACATTGAT 59.756 36.000 4.47 0.00 46.43 2.57
282 283 4.582240 TGCCTAACATTGTCAACACATTGA 59.418 37.500 4.47 0.00 42.73 2.57
283 284 4.869215 TGCCTAACATTGTCAACACATTG 58.131 39.130 0.00 0.00 39.05 2.82
284 285 5.726980 ATGCCTAACATTGTCAACACATT 57.273 34.783 0.00 0.00 34.40 2.71
285 286 6.832520 TTATGCCTAACATTGTCAACACAT 57.167 33.333 0.00 0.00 40.38 3.21
286 287 6.442952 GTTTATGCCTAACATTGTCAACACA 58.557 36.000 0.00 0.00 40.38 3.72
287 288 5.861787 GGTTTATGCCTAACATTGTCAACAC 59.138 40.000 0.00 0.00 40.38 3.32
288 289 5.536538 TGGTTTATGCCTAACATTGTCAACA 59.463 36.000 0.00 0.00 40.38 3.33
289 290 6.019779 TGGTTTATGCCTAACATTGTCAAC 57.980 37.500 0.00 0.00 40.38 3.18
290 291 6.656632 TTGGTTTATGCCTAACATTGTCAA 57.343 33.333 0.00 0.00 40.38 3.18
291 292 6.210385 ACATTGGTTTATGCCTAACATTGTCA 59.790 34.615 0.00 0.00 40.38 3.58
292 293 6.630071 ACATTGGTTTATGCCTAACATTGTC 58.370 36.000 0.00 0.00 40.38 3.18
293 294 6.350949 GGACATTGGTTTATGCCTAACATTGT 60.351 38.462 0.00 0.00 40.38 2.71
294 295 6.042143 GGACATTGGTTTATGCCTAACATTG 58.958 40.000 0.00 0.00 40.38 2.82
295 296 5.957774 AGGACATTGGTTTATGCCTAACATT 59.042 36.000 0.00 0.00 40.38 2.71
296 297 5.518865 AGGACATTGGTTTATGCCTAACAT 58.481 37.500 0.00 0.00 43.18 2.71
297 298 4.929479 AGGACATTGGTTTATGCCTAACA 58.071 39.130 0.00 0.00 33.32 2.41
298 299 5.417580 TGAAGGACATTGGTTTATGCCTAAC 59.582 40.000 0.00 0.00 33.68 2.34
299 300 5.417580 GTGAAGGACATTGGTTTATGCCTAA 59.582 40.000 0.00 0.00 33.68 2.69
300 301 4.947388 GTGAAGGACATTGGTTTATGCCTA 59.053 41.667 0.00 0.00 33.68 3.93
301 302 3.763897 GTGAAGGACATTGGTTTATGCCT 59.236 43.478 0.00 0.00 35.18 4.75
302 303 3.509575 TGTGAAGGACATTGGTTTATGCC 59.490 43.478 0.00 0.00 0.00 4.40
303 304 4.022416 TGTGTGAAGGACATTGGTTTATGC 60.022 41.667 0.00 0.00 36.78 3.14
304 305 5.009510 TGTGTGTGAAGGACATTGGTTTATG 59.990 40.000 0.00 0.00 36.78 1.90
305 306 5.136828 TGTGTGTGAAGGACATTGGTTTAT 58.863 37.500 0.00 0.00 36.78 1.40
306 307 4.527944 TGTGTGTGAAGGACATTGGTTTA 58.472 39.130 0.00 0.00 36.78 2.01
307 308 3.360867 TGTGTGTGAAGGACATTGGTTT 58.639 40.909 0.00 0.00 36.78 3.27
308 309 3.011566 TGTGTGTGAAGGACATTGGTT 57.988 42.857 0.00 0.00 36.78 3.67
309 310 2.727123 TGTGTGTGAAGGACATTGGT 57.273 45.000 0.00 0.00 36.78 3.67
310 311 4.589216 ATTTGTGTGTGAAGGACATTGG 57.411 40.909 0.00 0.00 36.78 3.16
311 312 6.907206 AAAATTTGTGTGTGAAGGACATTG 57.093 33.333 0.00 0.00 36.78 2.82
312 313 9.442047 TTTAAAAATTTGTGTGTGAAGGACATT 57.558 25.926 0.00 0.00 36.78 2.71
313 314 9.612066 ATTTAAAAATTTGTGTGTGAAGGACAT 57.388 25.926 0.00 0.00 36.78 3.06
378 379 9.710979 GAGCGTGCAACTAATAAATTTATAACA 57.289 29.630 11.07 1.94 31.75 2.41
379 380 9.710979 TGAGCGTGCAACTAATAAATTTATAAC 57.289 29.630 11.07 2.06 31.75 1.89
389 3107 7.728847 AATGAATATGAGCGTGCAACTAATA 57.271 32.000 0.00 0.00 31.75 0.98
398 3116 6.251589 GGACGAGTATAATGAATATGAGCGTG 59.748 42.308 0.00 0.00 30.58 5.34
430 3148 4.866486 GCTTGCTAAACCATTTGGAATCAG 59.134 41.667 3.01 0.00 38.94 2.90
445 3163 2.901291 AGGAATTTTGGGGCTTGCTAA 58.099 42.857 0.00 0.00 0.00 3.09
486 3204 3.193691 GCATATCGGTATCACTGCTAGGT 59.806 47.826 0.00 0.00 0.00 3.08
487 3205 3.193479 TGCATATCGGTATCACTGCTAGG 59.807 47.826 1.11 0.00 0.00 3.02
488 3206 4.440839 TGCATATCGGTATCACTGCTAG 57.559 45.455 1.11 0.00 0.00 3.42
560 3282 6.344500 AGGCAACATATCTCTCAGTTTGTAG 58.656 40.000 0.00 0.00 41.41 2.74
764 3487 4.012374 TGAAGAGCAAAACCATCATCCTC 58.988 43.478 0.00 0.00 0.00 3.71
885 3608 8.245195 AGAGAGGAATAGAGTTATCCAGAAAC 57.755 38.462 0.00 0.00 0.00 2.78
943 3666 2.203877 TAAGTCTGGCCCACGGGT 60.204 61.111 0.00 0.00 37.65 5.28
1183 3907 1.202758 TCAGCCCGCTTTCTTTCTTGA 60.203 47.619 0.00 0.00 0.00 3.02
1300 4024 1.594862 GTTGATATCCACTCAGCGCAC 59.405 52.381 11.47 0.00 0.00 5.34
1394 4118 0.104304 ACATCTCGTACCCAATCCGC 59.896 55.000 0.00 0.00 0.00 5.54
1405 4129 1.072331 AGAACCCAGCAAACATCTCGT 59.928 47.619 0.00 0.00 0.00 4.18
1613 4365 4.160252 ACACAAAGGAATTCTGCAACTTGT 59.840 37.500 5.23 4.01 0.00 3.16
1614 4366 4.505191 CACACAAAGGAATTCTGCAACTTG 59.495 41.667 5.23 3.46 0.00 3.16
1633 4385 1.663643 CCACACACACACAGTACACAC 59.336 52.381 0.00 0.00 0.00 3.82
1635 4387 0.655733 GCCACACACACACAGTACAC 59.344 55.000 0.00 0.00 0.00 2.90
1639 4391 1.748879 GTGGCCACACACACACAGT 60.749 57.895 31.23 0.00 46.90 3.55
1640 4392 3.110139 GTGGCCACACACACACAG 58.890 61.111 31.23 0.00 46.90 3.66
1650 4403 0.179045 ACAGAACTGTGAGTGGCCAC 60.179 55.000 29.22 29.22 43.11 5.01
1821 4580 4.269183 TCGAACCAATAATTGTGGAGCAT 58.731 39.130 15.00 1.27 39.62 3.79
1822 4581 3.680490 TCGAACCAATAATTGTGGAGCA 58.320 40.909 15.00 0.00 39.62 4.26
2054 4819 1.067250 CCAACTTTGGTGCCGGTTG 59.933 57.895 1.90 11.61 43.43 3.77
2215 4980 5.478503 AATTGGATCTCCTTGGGAATCTT 57.521 39.130 0.00 0.00 36.82 2.40
2229 4994 6.049790 GCTCCCGGATATAACTAATTGGATC 58.950 44.000 0.73 0.00 0.00 3.36
2248 5013 4.101741 AGACCATCAAGTTGTATAGCTCCC 59.898 45.833 2.11 0.00 0.00 4.30
2342 5107 1.517242 CTCTTGGTGACTTGACAGCC 58.483 55.000 0.00 0.00 37.46 4.85
2345 5110 1.486310 ACTGCTCTTGGTGACTTGACA 59.514 47.619 0.00 0.00 0.00 3.58
2424 5189 2.289072 CCACAAGGTCATCGACTGTCTT 60.289 50.000 6.21 0.00 32.47 3.01
2428 5193 0.036952 AGCCACAAGGTCATCGACTG 60.037 55.000 0.00 0.00 37.19 3.51
2432 5197 2.672961 TCTTAGCCACAAGGTCATCG 57.327 50.000 0.00 0.00 37.19 3.84
2453 5218 4.019231 ACCCTCCAATCCTCAGTAAACTTC 60.019 45.833 0.00 0.00 0.00 3.01
2457 5222 4.955335 TCTACCCTCCAATCCTCAGTAAA 58.045 43.478 0.00 0.00 0.00 2.01
2463 5228 2.038295 CAGCATCTACCCTCCAATCCTC 59.962 54.545 0.00 0.00 0.00 3.71
2486 5254 6.764560 ACACCTTGTTAAGTAACGAGTTCAAT 59.235 34.615 14.58 0.00 43.19 2.57
2544 5312 0.407528 TTGGGAGCATAACTGGGCAA 59.592 50.000 0.00 0.00 0.00 4.52
2547 5315 1.815408 CGGATTGGGAGCATAACTGGG 60.815 57.143 0.00 0.00 0.00 4.45
2565 5333 1.810755 GAACCTAAAAAGGCCACTCGG 59.189 52.381 5.01 0.00 0.00 4.63
2568 5336 4.070009 CGTAAGAACCTAAAAAGGCCACT 58.930 43.478 5.01 0.00 43.02 4.00
2647 5415 5.986741 TCAGACGACAACTAAAATACAAGCA 59.013 36.000 0.00 0.00 0.00 3.91
2787 5555 8.049117 ACTCCATAACAAGATCTTCAATAAGCA 58.951 33.333 4.57 0.00 32.36 3.91
2811 5579 2.138542 ACATCCCCTGCATATCCAACT 58.861 47.619 0.00 0.00 0.00 3.16
2855 5623 6.669125 TGGAACATCAATTTTGAATGGAGT 57.331 33.333 0.00 0.00 41.13 3.85
3041 5813 6.409524 TCTCTCTGCAATTTCAACCAAAAT 57.590 33.333 0.00 0.00 0.00 1.82
3042 5814 5.850557 TCTCTCTGCAATTTCAACCAAAA 57.149 34.783 0.00 0.00 0.00 2.44
3043 5815 5.126869 TGTTCTCTCTGCAATTTCAACCAAA 59.873 36.000 0.00 0.00 0.00 3.28
3088 5860 1.267574 TGCCCAGGTCTCATGTCCTC 61.268 60.000 0.00 0.00 29.38 3.71
3114 5886 3.970610 CACTTGTTGTCTCTGCAATTTCG 59.029 43.478 0.00 0.00 0.00 3.46
3128 5900 2.666619 GCCAATCGCTTCTCACTTGTTG 60.667 50.000 0.00 0.00 0.00 3.33
3129 5901 1.537202 GCCAATCGCTTCTCACTTGTT 59.463 47.619 0.00 0.00 0.00 2.83
3153 5925 0.615331 TCAGAACATGTCCAGGCCTC 59.385 55.000 0.00 0.00 0.00 4.70
3185 5957 7.096884 TCTGTAATCGAGTGCTAACAACTAT 57.903 36.000 2.07 0.00 0.00 2.12
3201 5973 5.708948 AGCTAATCTGATCGCTCTGTAATC 58.291 41.667 8.16 0.00 0.00 1.75
3205 5977 4.399004 AAAGCTAATCTGATCGCTCTGT 57.601 40.909 12.80 2.55 31.30 3.41
3245 6017 8.082852 ACATACTACATCCAAACAGACGATATC 58.917 37.037 0.00 0.00 0.00 1.63
3259 6031 7.996385 ACCAAAAATAAGCACATACTACATCC 58.004 34.615 0.00 0.00 0.00 3.51
3266 6038 6.801862 GTCAGTGACCAAAAATAAGCACATAC 59.198 38.462 12.54 0.00 0.00 2.39
3267 6039 6.908825 GTCAGTGACCAAAAATAAGCACATA 58.091 36.000 12.54 0.00 0.00 2.29
3268 6040 5.772521 GTCAGTGACCAAAAATAAGCACAT 58.227 37.500 12.54 0.00 0.00 3.21
3320 6092 7.331934 TGCTAACAGCTAATTCTACAAGTCTTG 59.668 37.037 11.17 11.17 42.97 3.02
3321 6093 7.332182 GTGCTAACAGCTAATTCTACAAGTCTT 59.668 37.037 0.00 0.00 42.97 3.01
3327 6099 3.863424 GCGTGCTAACAGCTAATTCTACA 59.137 43.478 0.00 0.00 42.97 2.74
3328 6100 4.026475 CAGCGTGCTAACAGCTAATTCTAC 60.026 45.833 0.00 0.00 42.97 2.59
3338 6110 4.329801 TGAAATATGACAGCGTGCTAACAG 59.670 41.667 0.00 0.00 0.00 3.16
3411 6183 4.026475 CAGCGTGCTAACAGCTAATTCTAC 60.026 45.833 0.00 0.00 42.97 2.59
3423 6195 2.782192 CGTAGTCATACAGCGTGCTAAC 59.218 50.000 0.00 0.00 31.76 2.34
3430 6202 1.600013 AGAGAGCGTAGTCATACAGCG 59.400 52.381 0.00 0.00 36.88 5.18
3468 6240 3.863400 GCAACGTAGTGCTAAAAGAGGGA 60.863 47.826 4.97 0.00 45.00 4.20
3534 6306 6.833933 AGGAGTTCAAACAAAGTAGAACCAAT 59.166 34.615 0.00 0.00 40.82 3.16
3550 6322 6.128282 GCGTCATGAAAAAGATAGGAGTTCAA 60.128 38.462 0.00 0.00 32.36 2.69
3677 6449 3.561725 GCCACTATATGTTCACAGGAAGC 59.438 47.826 0.00 0.00 32.62 3.86
3698 6470 2.694760 GCTGCCAGGCTACTTGTGC 61.695 63.158 14.15 2.07 0.00 4.57
3705 6477 1.482593 GAAGAGTTAGCTGCCAGGCTA 59.517 52.381 14.15 0.00 42.97 3.93
3724 6496 6.243148 GTTAACAGGTGGGAGATTAAAAGGA 58.757 40.000 0.00 0.00 0.00 3.36
3741 6513 9.046296 GTCCATGAGATAATAACAGGTTAACAG 57.954 37.037 8.10 1.77 0.00 3.16
3743 6515 8.958119 TGTCCATGAGATAATAACAGGTTAAC 57.042 34.615 0.00 0.00 0.00 2.01
3746 6518 9.561069 GTAATGTCCATGAGATAATAACAGGTT 57.439 33.333 0.00 0.00 0.00 3.50
3747 6519 8.157476 GGTAATGTCCATGAGATAATAACAGGT 58.843 37.037 0.00 0.00 0.00 4.00
3748 6520 7.607991 GGGTAATGTCCATGAGATAATAACAGG 59.392 40.741 0.00 0.00 0.00 4.00
3749 6521 8.156820 TGGGTAATGTCCATGAGATAATAACAG 58.843 37.037 0.00 0.00 0.00 3.16
3750 6522 8.040002 TGGGTAATGTCCATGAGATAATAACA 57.960 34.615 0.00 0.00 0.00 2.41
3751 6523 8.918202 TTGGGTAATGTCCATGAGATAATAAC 57.082 34.615 0.00 0.00 33.82 1.89
3754 6526 6.103205 ACCTTGGGTAATGTCCATGAGATAAT 59.897 38.462 0.00 0.00 32.11 1.28
3781 6553 3.194755 ACCCCATTTTGACCGCTTTATTC 59.805 43.478 0.00 0.00 0.00 1.75
3809 6581 4.277476 TGTCCTCTTTTCTTGAAGGCAAA 58.723 39.130 0.00 0.00 32.73 3.68
3820 6592 6.022208 GCGCTTTAAGTAATGTCCTCTTTTC 58.978 40.000 0.00 0.00 0.00 2.29
3850 6623 9.277783 GACAATAGCTTATGACCAGTTCAATAT 57.722 33.333 0.00 0.00 37.92 1.28
3851 6624 8.486210 AGACAATAGCTTATGACCAGTTCAATA 58.514 33.333 0.00 0.00 37.92 1.90
3853 6626 6.595326 CAGACAATAGCTTATGACCAGTTCAA 59.405 38.462 0.00 0.00 37.92 2.69
3854 6627 6.108687 CAGACAATAGCTTATGACCAGTTCA 58.891 40.000 0.00 0.00 39.11 3.18
3855 6628 6.036517 CACAGACAATAGCTTATGACCAGTTC 59.963 42.308 0.00 0.00 0.00 3.01
3856 6629 5.877012 CACAGACAATAGCTTATGACCAGTT 59.123 40.000 0.00 0.00 0.00 3.16
3857 6630 5.046304 ACACAGACAATAGCTTATGACCAGT 60.046 40.000 0.00 0.00 0.00 4.00
3858 6631 5.292834 CACACAGACAATAGCTTATGACCAG 59.707 44.000 0.00 0.00 0.00 4.00
3859 6632 5.178061 CACACAGACAATAGCTTATGACCA 58.822 41.667 0.00 0.00 0.00 4.02
3860 6633 5.178797 ACACACAGACAATAGCTTATGACC 58.821 41.667 0.00 0.00 0.00 4.02
3861 6634 7.827819 TTACACACAGACAATAGCTTATGAC 57.172 36.000 0.00 0.00 0.00 3.06
3864 6637 9.547753 CCTTATTACACACAGACAATAGCTTAT 57.452 33.333 0.00 0.00 0.00 1.73
3865 6638 8.537016 ACCTTATTACACACAGACAATAGCTTA 58.463 33.333 0.00 0.00 0.00 3.09
3866 6639 7.334421 CACCTTATTACACACAGACAATAGCTT 59.666 37.037 0.00 0.00 0.00 3.74
3867 6640 6.818644 CACCTTATTACACACAGACAATAGCT 59.181 38.462 0.00 0.00 0.00 3.32
3868 6641 6.594159 ACACCTTATTACACACAGACAATAGC 59.406 38.462 0.00 0.00 0.00 2.97
3869 6642 9.084164 GTACACCTTATTACACACAGACAATAG 57.916 37.037 0.00 0.00 0.00 1.73
3870 6643 8.586744 TGTACACCTTATTACACACAGACAATA 58.413 33.333 0.00 0.00 0.00 1.90
3871 6644 7.386848 GTGTACACCTTATTACACACAGACAAT 59.613 37.037 15.42 0.00 45.01 2.71
3872 6645 6.702723 GTGTACACCTTATTACACACAGACAA 59.297 38.462 15.42 0.00 45.01 3.18
3873 6646 6.218019 GTGTACACCTTATTACACACAGACA 58.782 40.000 15.42 0.00 45.01 3.41
3874 6647 6.701432 GTGTACACCTTATTACACACAGAC 57.299 41.667 15.42 0.00 45.01 3.51
3890 6663 3.979495 CCGTACTTCTTCAGTGTGTACAC 59.021 47.826 19.36 19.36 46.77 2.90
3894 6679 2.223971 CCACCGTACTTCTTCAGTGTGT 60.224 50.000 0.00 0.00 35.97 3.72
3897 6682 1.429463 GCCACCGTACTTCTTCAGTG 58.571 55.000 0.00 0.00 35.97 3.66
3931 6716 6.998673 AGCTCTGTTTTGTTGTATAGAAACCT 59.001 34.615 0.00 0.00 32.49 3.50
3932 6717 7.078228 CAGCTCTGTTTTGTTGTATAGAAACC 58.922 38.462 0.00 0.00 32.49 3.27
4016 10669 6.483307 TCGGCCTGATTGACAAATAGAAATAG 59.517 38.462 0.00 0.00 0.00 1.73
4017 10670 6.260050 GTCGGCCTGATTGACAAATAGAAATA 59.740 38.462 0.00 0.00 32.91 1.40
4018 10671 5.066505 GTCGGCCTGATTGACAAATAGAAAT 59.933 40.000 0.00 0.00 32.91 2.17
4019 10672 4.394920 GTCGGCCTGATTGACAAATAGAAA 59.605 41.667 0.00 0.00 32.91 2.52
4020 10673 3.938963 GTCGGCCTGATTGACAAATAGAA 59.061 43.478 0.00 0.00 32.91 2.10
4021 10674 3.055458 TGTCGGCCTGATTGACAAATAGA 60.055 43.478 7.84 0.00 39.50 1.98
4037 10690 1.966451 CTTGGAGTTGGGTGTCGGC 60.966 63.158 0.00 0.00 0.00 5.54
4038 10691 1.966451 GCTTGGAGTTGGGTGTCGG 60.966 63.158 0.00 0.00 0.00 4.79
4046 10699 3.058160 CAGCCGGGCTTGGAGTTG 61.058 66.667 21.26 2.87 36.40 3.16
4056 10709 3.658757 TTTTTGAATTTCTCAGCCGGG 57.341 42.857 2.18 0.00 34.81 5.73
4080 10734 7.462571 AAATGTATTTTTCTCGGCCTTACTT 57.537 32.000 0.00 0.00 0.00 2.24
4081 10735 7.462571 AAAATGTATTTTTCTCGGCCTTACT 57.537 32.000 0.00 0.00 36.65 2.24
4108 10762 0.878416 AAGCTTTGCGTATTTGCGGA 59.122 45.000 0.00 0.00 37.81 5.54
4156 10810 7.004555 TGTACCATCACTTTGTACTCATTCT 57.995 36.000 0.00 0.00 36.63 2.40
4161 10815 5.756347 TGTGTTGTACCATCACTTTGTACTC 59.244 40.000 11.44 0.00 35.74 2.59
4177 10831 0.718904 GCGATCGTGCATGTGTTGTA 59.281 50.000 17.81 0.00 34.15 2.41
4190 10844 1.590238 GTTCACTCCATCTTGCGATCG 59.410 52.381 11.69 11.69 0.00 3.69
4257 10911 1.401670 GCGGTGTTGTGTGTTTGTTCA 60.402 47.619 0.00 0.00 0.00 3.18
4275 10929 4.386867 TCTCATGTTAGGGAGTTTAGCG 57.613 45.455 0.00 0.00 32.93 4.26
4329 10983 1.945317 ACCCCCTACCCTGAAGTCTAT 59.055 52.381 0.00 0.00 0.00 1.98
4330 10984 1.290130 GACCCCCTACCCTGAAGTCTA 59.710 57.143 0.00 0.00 0.00 2.59
4335 10989 2.457794 GGGACCCCCTACCCTGAA 59.542 66.667 0.00 0.00 41.34 3.02
4368 11022 2.104111 TCATCCCATGTTACCACCGATC 59.896 50.000 0.00 0.00 0.00 3.69
4431 11085 8.058847 ACAATCAAAGCAGGAAATAGGGTATTA 58.941 33.333 0.00 0.00 0.00 0.98
4432 11086 6.897413 ACAATCAAAGCAGGAAATAGGGTATT 59.103 34.615 0.00 0.00 0.00 1.89
4433 11087 6.322201 CACAATCAAAGCAGGAAATAGGGTAT 59.678 38.462 0.00 0.00 0.00 2.73
4434 11088 5.652014 CACAATCAAAGCAGGAAATAGGGTA 59.348 40.000 0.00 0.00 0.00 3.69
4435 11089 4.463891 CACAATCAAAGCAGGAAATAGGGT 59.536 41.667 0.00 0.00 0.00 4.34
4436 11090 4.463891 ACACAATCAAAGCAGGAAATAGGG 59.536 41.667 0.00 0.00 0.00 3.53
4437 11091 5.649782 ACACAATCAAAGCAGGAAATAGG 57.350 39.130 0.00 0.00 0.00 2.57
4438 11092 6.680810 TCAACACAATCAAAGCAGGAAATAG 58.319 36.000 0.00 0.00 0.00 1.73
4439 11093 6.647334 TCAACACAATCAAAGCAGGAAATA 57.353 33.333 0.00 0.00 0.00 1.40
4440 11094 5.534207 TCAACACAATCAAAGCAGGAAAT 57.466 34.783 0.00 0.00 0.00 2.17
4441 11095 4.998671 TCAACACAATCAAAGCAGGAAA 57.001 36.364 0.00 0.00 0.00 3.13
4477 11131 5.073428 TCTCGAGGTAGATCAAGCATGTAT 58.927 41.667 13.56 0.00 0.00 2.29
4595 11249 0.033208 GGCAGGTTCATGGGGATGAA 60.033 55.000 0.00 0.00 38.14 2.57
4596 11250 0.920763 AGGCAGGTTCATGGGGATGA 60.921 55.000 0.00 0.00 0.00 2.92
4607 11261 0.253160 TGGGGAGACATAGGCAGGTT 60.253 55.000 0.00 0.00 0.00 3.50
4613 11267 0.181350 GGTGCTTGGGGAGACATAGG 59.819 60.000 0.00 0.00 0.00 2.57
4617 11271 1.352622 ACTTGGTGCTTGGGGAGACA 61.353 55.000 0.00 0.00 0.00 3.41
4642 11296 0.175760 GGGCACGAGCTCTTGTCATA 59.824 55.000 24.18 0.00 38.57 2.15
4732 11387 0.474184 CACAAGGTCCCTGGTTGAGT 59.526 55.000 2.18 0.00 0.00 3.41
4742 11397 1.310933 CCTGAGCATGCACAAGGTCC 61.311 60.000 21.98 0.00 0.00 4.46
4749 11404 1.089920 CCAAGTACCTGAGCATGCAC 58.910 55.000 21.98 15.08 0.00 4.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.