Multiple sequence alignment - TraesCS3B01G067000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G067000 chr3B 100.000 3056 0 0 1 3056 39816108 39819163 0.000000e+00 5644.0
1 TraesCS3B01G067000 chr3B 95.980 2438 92 6 206 2641 173888307 173890740 0.000000e+00 3954.0
2 TraesCS3B01G067000 chr3B 94.615 130 6 1 2818 2947 483358380 483358252 1.860000e-47 200.0
3 TraesCS3B01G067000 chr6B 96.681 2350 74 4 206 2552 625641641 625639293 0.000000e+00 3904.0
4 TraesCS3B01G067000 chr6B 98.030 203 4 0 1 203 481467216 481467418 1.350000e-93 353.0
5 TraesCS3B01G067000 chr7A 96.415 2371 73 4 206 2573 211291846 211294207 0.000000e+00 3897.0
6 TraesCS3B01G067000 chr7B 95.490 2439 89 11 206 2641 139542643 139540223 0.000000e+00 3875.0
7 TraesCS3B01G067000 chr5A 96.481 2330 73 7 207 2530 534933337 534935663 0.000000e+00 3840.0
8 TraesCS3B01G067000 chr5A 96.703 2002 64 2 607 2606 647029609 647031610 0.000000e+00 3330.0
9 TraesCS3B01G067000 chr5A 97.608 209 4 1 1 208 315501009 315500801 1.040000e-94 357.0
10 TraesCS3B01G067000 chr2B 97.275 2202 55 4 329 2526 357718974 357716774 0.000000e+00 3729.0
11 TraesCS3B01G067000 chr2B 96.596 2203 66 6 329 2526 357344747 357342549 0.000000e+00 3644.0
12 TraesCS3B01G067000 chr2B 96.893 1738 51 3 206 1942 357429724 357431459 0.000000e+00 2907.0
13 TraesCS3B01G067000 chr2B 97.537 203 5 0 1 203 727234572 727234370 6.270000e-92 348.0
14 TraesCS3B01G067000 chr2B 94.845 194 10 0 2715 2908 357464945 357465138 1.380000e-78 303.0
15 TraesCS3B01G067000 chr2B 94.845 194 10 0 2715 2908 357693299 357693106 1.380000e-78 303.0
16 TraesCS3B01G067000 chrUn 97.994 1645 32 1 936 2579 221548123 221546479 0.000000e+00 2854.0
17 TraesCS3B01G067000 chrUn 97.500 40 1 0 2602 2641 369394633 369394672 5.470000e-08 69.4
18 TraesCS3B01G067000 chr3A 97.050 1695 49 1 936 2629 51916454 51918148 0.000000e+00 2852.0
19 TraesCS3B01G067000 chr3D 95.699 372 14 2 2633 3002 478075551 478075180 5.640000e-167 597.0
20 TraesCS3B01G067000 chr3D 93.578 109 5 2 2881 2988 602899910 602900017 8.770000e-36 161.0
21 TraesCS3B01G067000 chr4D 92.832 279 19 1 2633 2910 135065595 135065873 1.320000e-108 403.0
22 TraesCS3B01G067000 chr4D 86.800 250 32 1 2734 2982 436809863 436809614 8.350000e-71 278.0
23 TraesCS3B01G067000 chr5B 99.490 196 1 0 1 196 222365597 222365792 1.040000e-94 357.0
24 TraesCS3B01G067000 chr4B 98.030 203 4 0 1 203 306604516 306604314 1.350000e-93 353.0
25 TraesCS3B01G067000 chr4B 97.537 203 5 0 1 203 37693285 37693487 6.270000e-92 348.0
26 TraesCS3B01G067000 chr4B 98.276 58 0 1 2999 3056 507235562 507235506 1.940000e-17 100.0
27 TraesCS3B01G067000 chr1A 96.698 212 6 1 1 212 45800013 45800223 4.850000e-93 351.0
28 TraesCS3B01G067000 chr1B 98.485 198 3 0 1 198 186799076 186798879 1.740000e-92 350.0
29 TraesCS3B01G067000 chr1B 89.506 162 14 2 2818 2977 339014450 339014610 5.170000e-48 202.0
30 TraesCS3B01G067000 chr1B 93.846 130 7 1 2818 2947 338938751 338938879 8.650000e-46 195.0
31 TraesCS3B01G067000 chr1B 95.385 65 0 2 2993 3056 59058224 59058162 1.940000e-17 100.0
32 TraesCS3B01G067000 chr1B 97.674 43 1 0 2599 2641 93865857 93865815 1.180000e-09 75.0
33 TraesCS3B01G067000 chr1B 97.674 43 1 0 2599 2641 339047771 339047813 1.180000e-09 75.0
34 TraesCS3B01G067000 chr4A 98.000 200 4 0 1 200 450790274 450790075 6.270000e-92 348.0
35 TraesCS3B01G067000 chr4A 96.667 60 1 1 2997 3056 657941068 657941010 6.970000e-17 99.0
36 TraesCS3B01G067000 chr4A 96.667 60 1 1 2997 3056 657980528 657980470 6.970000e-17 99.0
37 TraesCS3B01G067000 chr5D 85.772 246 25 8 2753 2989 327749588 327749344 5.060000e-63 252.0
38 TraesCS3B01G067000 chr5D 93.333 105 4 3 2887 2989 324471059 324470956 5.280000e-33 152.0
39 TraesCS3B01G067000 chr2D 92.308 104 5 3 2887 2988 604412083 604411981 8.830000e-31 145.0
40 TraesCS3B01G067000 chr7D 97.500 40 1 0 2602 2641 382096409 382096448 5.470000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G067000 chr3B 39816108 39819163 3055 False 5644 5644 100.000 1 3056 1 chr3B.!!$F1 3055
1 TraesCS3B01G067000 chr3B 173888307 173890740 2433 False 3954 3954 95.980 206 2641 1 chr3B.!!$F2 2435
2 TraesCS3B01G067000 chr6B 625639293 625641641 2348 True 3904 3904 96.681 206 2552 1 chr6B.!!$R1 2346
3 TraesCS3B01G067000 chr7A 211291846 211294207 2361 False 3897 3897 96.415 206 2573 1 chr7A.!!$F1 2367
4 TraesCS3B01G067000 chr7B 139540223 139542643 2420 True 3875 3875 95.490 206 2641 1 chr7B.!!$R1 2435
5 TraesCS3B01G067000 chr5A 534933337 534935663 2326 False 3840 3840 96.481 207 2530 1 chr5A.!!$F1 2323
6 TraesCS3B01G067000 chr5A 647029609 647031610 2001 False 3330 3330 96.703 607 2606 1 chr5A.!!$F2 1999
7 TraesCS3B01G067000 chr2B 357716774 357718974 2200 True 3729 3729 97.275 329 2526 1 chr2B.!!$R3 2197
8 TraesCS3B01G067000 chr2B 357342549 357344747 2198 True 3644 3644 96.596 329 2526 1 chr2B.!!$R1 2197
9 TraesCS3B01G067000 chr2B 357429724 357431459 1735 False 2907 2907 96.893 206 1942 1 chr2B.!!$F1 1736
10 TraesCS3B01G067000 chrUn 221546479 221548123 1644 True 2854 2854 97.994 936 2579 1 chrUn.!!$R1 1643
11 TraesCS3B01G067000 chr3A 51916454 51918148 1694 False 2852 2852 97.050 936 2629 1 chr3A.!!$F1 1693

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
36 37 0.034089 AGGGTTGTGATAGGCTTGGC 60.034 55.0 0.0 0.00 0.00 4.52 F
135 136 0.036294 GGGAAGTCCTCGTGAAAGGG 60.036 60.0 0.0 0.00 37.02 3.95 F
136 137 0.685660 GGAAGTCCTCGTGAAAGGGT 59.314 55.0 0.0 0.00 37.02 4.34 F
1231 1237 0.953471 TATGGTTATGCCGGCGATGC 60.953 55.0 23.9 12.11 41.21 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1512 1518 1.167851 CAGGTCCACGCATGTTGAAT 58.832 50.000 0.0 0.0 0.00 2.57 R
1910 1918 1.450312 GCTGCGGTGAAGTAGGCAT 60.450 57.895 0.0 0.0 34.49 4.40 R
2033 2042 6.542821 TCCTATGGTGAACAAAAAGATGACT 58.457 36.000 0.0 0.0 0.00 3.41 R
2788 2799 0.035881 CTTCACTGCCCTCAAGCTCA 59.964 55.000 0.0 0.0 0.00 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.402981 AAGGGTTTCATATCTAAGGGTTGT 57.597 37.500 0.00 0.00 0.00 3.32
25 26 5.755849 AGGGTTTCATATCTAAGGGTTGTG 58.244 41.667 0.00 0.00 0.00 3.33
26 27 5.491078 AGGGTTTCATATCTAAGGGTTGTGA 59.509 40.000 0.00 0.00 0.00 3.58
27 28 6.160459 AGGGTTTCATATCTAAGGGTTGTGAT 59.840 38.462 0.00 0.00 0.00 3.06
28 29 7.349859 AGGGTTTCATATCTAAGGGTTGTGATA 59.650 37.037 0.00 0.00 0.00 2.15
29 30 7.661847 GGGTTTCATATCTAAGGGTTGTGATAG 59.338 40.741 0.00 0.00 0.00 2.08
30 31 7.661847 GGTTTCATATCTAAGGGTTGTGATAGG 59.338 40.741 0.00 0.00 0.00 2.57
31 32 6.360370 TCATATCTAAGGGTTGTGATAGGC 57.640 41.667 0.00 0.00 0.00 3.93
32 33 6.084738 TCATATCTAAGGGTTGTGATAGGCT 58.915 40.000 0.00 0.00 0.00 4.58
33 34 6.558775 TCATATCTAAGGGTTGTGATAGGCTT 59.441 38.462 0.00 0.00 0.00 4.35
34 35 4.487714 TCTAAGGGTTGTGATAGGCTTG 57.512 45.455 0.00 0.00 0.00 4.01
35 36 2.514458 AAGGGTTGTGATAGGCTTGG 57.486 50.000 0.00 0.00 0.00 3.61
36 37 0.034089 AGGGTTGTGATAGGCTTGGC 60.034 55.000 0.00 0.00 0.00 4.52
37 38 1.376609 GGGTTGTGATAGGCTTGGCG 61.377 60.000 0.00 0.00 0.00 5.69
38 39 0.392461 GGTTGTGATAGGCTTGGCGA 60.392 55.000 0.00 0.00 0.00 5.54
39 40 1.009829 GTTGTGATAGGCTTGGCGAG 58.990 55.000 0.00 0.00 0.00 5.03
50 51 4.458666 TGGCGAGCCAACGTAAAA 57.541 50.000 15.24 0.00 44.12 1.52
51 52 2.704108 TGGCGAGCCAACGTAAAAA 58.296 47.368 15.24 0.00 44.12 1.94
52 53 0.308376 TGGCGAGCCAACGTAAAAAC 59.692 50.000 15.24 0.00 44.12 2.43
53 54 0.589708 GGCGAGCCAACGTAAAAACT 59.410 50.000 9.58 0.00 35.81 2.66
54 55 1.799994 GGCGAGCCAACGTAAAAACTA 59.200 47.619 9.58 0.00 35.81 2.24
55 56 2.159747 GGCGAGCCAACGTAAAAACTAG 60.160 50.000 9.58 0.00 35.81 2.57
56 57 2.723923 GCGAGCCAACGTAAAAACTAGC 60.724 50.000 0.00 0.00 35.59 3.42
57 58 2.159747 CGAGCCAACGTAAAAACTAGCC 60.160 50.000 0.00 0.00 0.00 3.93
58 59 2.809696 GAGCCAACGTAAAAACTAGCCA 59.190 45.455 0.00 0.00 0.00 4.75
59 60 2.812011 AGCCAACGTAAAAACTAGCCAG 59.188 45.455 0.00 0.00 0.00 4.85
60 61 2.551032 GCCAACGTAAAAACTAGCCAGT 59.449 45.455 0.00 0.00 36.19 4.00
61 62 3.364664 GCCAACGTAAAAACTAGCCAGTC 60.365 47.826 0.00 0.00 32.29 3.51
62 63 3.187842 CCAACGTAAAAACTAGCCAGTCC 59.812 47.826 0.00 0.00 32.29 3.85
63 64 4.062991 CAACGTAAAAACTAGCCAGTCCT 58.937 43.478 0.00 0.00 32.29 3.85
64 65 4.347360 ACGTAAAAACTAGCCAGTCCTT 57.653 40.909 0.00 0.00 32.29 3.36
65 66 4.711399 ACGTAAAAACTAGCCAGTCCTTT 58.289 39.130 0.00 0.00 32.29 3.11
66 67 4.514066 ACGTAAAAACTAGCCAGTCCTTTG 59.486 41.667 0.00 0.00 32.29 2.77
67 68 4.083484 CGTAAAAACTAGCCAGTCCTTTGG 60.083 45.833 0.00 0.00 41.35 3.28
68 69 2.586648 AAACTAGCCAGTCCTTTGGG 57.413 50.000 0.00 0.00 38.72 4.12
70 71 2.337359 ACTAGCCAGTCCTTTGGGTA 57.663 50.000 4.17 4.17 46.57 3.69
71 72 2.846950 ACTAGCCAGTCCTTTGGGTAT 58.153 47.619 4.61 0.00 46.74 2.73
72 73 2.505819 ACTAGCCAGTCCTTTGGGTATG 59.494 50.000 4.61 2.96 46.74 2.39
73 74 1.668826 AGCCAGTCCTTTGGGTATGA 58.331 50.000 0.00 0.00 46.57 2.15
74 75 1.992557 AGCCAGTCCTTTGGGTATGAA 59.007 47.619 0.00 0.00 46.57 2.57
75 76 2.378547 AGCCAGTCCTTTGGGTATGAAA 59.621 45.455 0.00 0.00 46.57 2.69
76 77 2.492088 GCCAGTCCTTTGGGTATGAAAC 59.508 50.000 0.00 0.00 38.72 2.78
77 78 6.882412 AGCCAGTCCTTTGGGTATGAAACC 62.882 50.000 0.00 0.00 46.57 3.27
98 99 4.073293 CCATTTGGGCGAGAATAGTACT 57.927 45.455 0.00 0.00 0.00 2.73
99 100 5.209818 CCATTTGGGCGAGAATAGTACTA 57.790 43.478 4.77 4.77 0.00 1.82
100 101 5.230942 CCATTTGGGCGAGAATAGTACTAG 58.769 45.833 8.85 0.00 0.00 2.57
101 102 4.931661 TTTGGGCGAGAATAGTACTAGG 57.068 45.455 8.85 0.00 0.00 3.02
102 103 3.870538 TGGGCGAGAATAGTACTAGGA 57.129 47.619 8.85 0.00 0.00 2.94
103 104 4.383931 TGGGCGAGAATAGTACTAGGAT 57.616 45.455 8.85 0.00 0.00 3.24
104 105 4.079970 TGGGCGAGAATAGTACTAGGATG 58.920 47.826 8.85 0.00 0.00 3.51
105 106 3.444388 GGGCGAGAATAGTACTAGGATGG 59.556 52.174 8.85 0.00 0.00 3.51
106 107 3.444388 GGCGAGAATAGTACTAGGATGGG 59.556 52.174 8.85 0.00 0.00 4.00
107 108 4.080687 GCGAGAATAGTACTAGGATGGGT 58.919 47.826 8.85 0.00 0.00 4.51
108 109 4.082679 GCGAGAATAGTACTAGGATGGGTG 60.083 50.000 8.85 0.00 0.00 4.61
109 110 5.314529 CGAGAATAGTACTAGGATGGGTGA 58.685 45.833 8.85 0.00 0.00 4.02
110 111 5.181622 CGAGAATAGTACTAGGATGGGTGAC 59.818 48.000 8.85 0.00 0.00 3.67
122 123 4.234673 GGTGACCTCCTGGGAAGT 57.765 61.111 0.00 0.00 38.76 3.01
123 124 1.984020 GGTGACCTCCTGGGAAGTC 59.016 63.158 10.52 10.52 36.44 3.01
124 125 1.554583 GGTGACCTCCTGGGAAGTCC 61.555 65.000 13.79 6.97 35.38 3.85
125 126 0.545548 GTGACCTCCTGGGAAGTCCT 60.546 60.000 13.79 0.00 35.38 3.85
126 127 0.252284 TGACCTCCTGGGAAGTCCTC 60.252 60.000 13.79 0.00 35.38 3.71
127 128 1.305381 ACCTCCTGGGAAGTCCTCG 60.305 63.158 0.00 0.00 38.76 4.63
128 129 1.305381 CCTCCTGGGAAGTCCTCGT 60.305 63.158 0.00 0.00 37.23 4.18
129 130 1.608717 CCTCCTGGGAAGTCCTCGTG 61.609 65.000 0.00 0.00 37.23 4.35
130 131 0.612174 CTCCTGGGAAGTCCTCGTGA 60.612 60.000 0.00 0.00 36.20 4.35
131 132 0.178944 TCCTGGGAAGTCCTCGTGAA 60.179 55.000 0.00 0.00 36.20 3.18
132 133 0.685097 CCTGGGAAGTCCTCGTGAAA 59.315 55.000 0.00 0.00 36.20 2.69
133 134 1.338200 CCTGGGAAGTCCTCGTGAAAG 60.338 57.143 0.00 0.00 36.20 2.62
134 135 0.685097 TGGGAAGTCCTCGTGAAAGG 59.315 55.000 0.00 0.00 37.81 3.11
135 136 0.036294 GGGAAGTCCTCGTGAAAGGG 60.036 60.000 0.00 0.00 37.02 3.95
136 137 0.685660 GGAAGTCCTCGTGAAAGGGT 59.314 55.000 0.00 0.00 37.02 4.34
137 138 1.071857 GGAAGTCCTCGTGAAAGGGTT 59.928 52.381 0.00 0.00 37.02 4.11
138 139 2.486727 GGAAGTCCTCGTGAAAGGGTTT 60.487 50.000 0.00 0.00 37.02 3.27
139 140 2.545537 AGTCCTCGTGAAAGGGTTTC 57.454 50.000 0.00 0.00 40.08 2.78
140 141 1.766496 AGTCCTCGTGAAAGGGTTTCA 59.234 47.619 0.00 0.00 46.68 2.69
150 151 5.975988 TGAAAGGGTTTCATATCTAGCCT 57.024 39.130 0.00 0.00 44.21 4.58
152 153 6.827727 TGAAAGGGTTTCATATCTAGCCTAC 58.172 40.000 0.00 0.00 44.21 3.18
153 154 5.827326 AAGGGTTTCATATCTAGCCTACC 57.173 43.478 0.00 0.00 38.75 3.18
154 155 4.168883 AGGGTTTCATATCTAGCCTACCC 58.831 47.826 0.00 0.00 43.42 3.69
155 156 3.263681 GGGTTTCATATCTAGCCTACCCC 59.736 52.174 0.00 0.00 38.39 4.95
156 157 3.908103 GGTTTCATATCTAGCCTACCCCA 59.092 47.826 0.00 0.00 0.00 4.96
157 158 4.349930 GGTTTCATATCTAGCCTACCCCAA 59.650 45.833 0.00 0.00 0.00 4.12
158 159 5.306394 GTTTCATATCTAGCCTACCCCAAC 58.694 45.833 0.00 0.00 0.00 3.77
159 160 4.487282 TCATATCTAGCCTACCCCAACT 57.513 45.455 0.00 0.00 0.00 3.16
160 161 4.827789 TCATATCTAGCCTACCCCAACTT 58.172 43.478 0.00 0.00 0.00 2.66
161 162 4.593206 TCATATCTAGCCTACCCCAACTTG 59.407 45.833 0.00 0.00 0.00 3.16
162 163 2.337359 TCTAGCCTACCCCAACTTGT 57.663 50.000 0.00 0.00 0.00 3.16
163 164 2.627933 TCTAGCCTACCCCAACTTGTT 58.372 47.619 0.00 0.00 0.00 2.83
164 165 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
165 166 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
185 186 4.717279 TGGGACAAAAGGCTTAGTAAGT 57.283 40.909 11.51 0.00 31.92 2.24
186 187 5.829062 TGGGACAAAAGGCTTAGTAAGTA 57.171 39.130 11.51 0.00 31.92 2.24
187 188 6.190346 TGGGACAAAAGGCTTAGTAAGTAA 57.810 37.500 11.51 0.00 31.92 2.24
188 189 6.235664 TGGGACAAAAGGCTTAGTAAGTAAG 58.764 40.000 11.51 0.00 37.30 2.34
189 190 6.183361 TGGGACAAAAGGCTTAGTAAGTAAGT 60.183 38.462 11.51 2.81 36.83 2.24
190 191 7.016465 TGGGACAAAAGGCTTAGTAAGTAAGTA 59.984 37.037 11.51 0.00 36.83 2.24
191 192 7.879677 GGGACAAAAGGCTTAGTAAGTAAGTAA 59.120 37.037 11.51 0.00 40.47 2.24
192 193 8.933807 GGACAAAAGGCTTAGTAAGTAAGTAAG 58.066 37.037 11.51 0.50 42.04 2.34
193 194 9.486497 GACAAAAGGCTTAGTAAGTAAGTAAGT 57.514 33.333 11.51 3.37 41.44 2.24
410 411 4.100189 GCAGGGCTAAACTTCTATCTGAGA 59.900 45.833 0.00 0.00 0.00 3.27
439 440 1.136828 CAGGATCCGGGATGGGTTAA 58.863 55.000 15.70 0.00 38.76 2.01
476 478 3.785887 AGCTTAATCACAATACCCCCTGA 59.214 43.478 0.00 0.00 0.00 3.86
491 493 1.916181 CCCTGAAAGACATACCTGGGT 59.084 52.381 0.00 0.00 34.07 4.51
619 621 1.207089 CCCTACTTGGTCGATGAAGCA 59.793 52.381 6.35 0.00 0.00 3.91
1069 1075 6.874278 TTGGGACTCTCTATTTCATCTTCA 57.126 37.500 0.00 0.00 0.00 3.02
1231 1237 0.953471 TATGGTTATGCCGGCGATGC 60.953 55.000 23.90 12.11 41.21 3.91
1259 1265 6.463755 GGTGGATTTGGTAATTGGTTTGTTCT 60.464 38.462 0.00 0.00 0.00 3.01
1374 1380 2.846827 AGCCTTAGTAGAAGTGGGCAAT 59.153 45.455 0.00 0.00 41.71 3.56
1412 1418 3.005578 GTCTATCCGCCCTTAAGTGGTAG 59.994 52.174 0.97 5.66 38.61 3.18
1775 1783 5.995282 TGCCTGGATTTGGTATTATTAGTCG 59.005 40.000 0.00 0.00 0.00 4.18
1801 1809 7.611213 ATCGTATCGACCTTTTCAAGAAAAT 57.389 32.000 8.28 0.00 39.18 1.82
1900 1908 4.634012 ATGTTTACTGTGGGCTTAGACA 57.366 40.909 0.00 0.00 0.00 3.41
1910 1918 2.169561 TGGGCTTAGACATTGATACGCA 59.830 45.455 0.00 0.00 0.00 5.24
2033 2042 4.917385 ACACCCATGTTATTTGCTGTAGA 58.083 39.130 0.00 0.00 34.46 2.59
2212 2223 2.829720 GGGTGGGTAAAATCTTTGGTCC 59.170 50.000 0.00 0.00 0.00 4.46
2306 2317 4.323715 CCCATGCATTTCTTAGGGCTTTTT 60.324 41.667 0.00 0.00 0.00 1.94
2377 2388 2.080286 GCTCTGAGCAGTTTCGGTTA 57.920 50.000 24.02 0.00 41.89 2.85
2408 2419 5.556915 TCTGTAGTTGGGATTCATCGTTTT 58.443 37.500 0.00 0.00 0.00 2.43
2463 2474 4.335400 AAGAACCAAAAATGTGCGGAAT 57.665 36.364 0.00 0.00 0.00 3.01
2629 2640 4.260253 GGCTCCGTATTGAAAACTCGAATC 60.260 45.833 0.00 0.00 0.00 2.52
2641 2652 6.203145 TGAAAACTCGAATCGGATTTTGTGTA 59.797 34.615 17.70 4.43 29.66 2.90
2642 2653 5.526010 AACTCGAATCGGATTTTGTGTAC 57.474 39.130 4.47 0.00 0.00 2.90
2643 2654 3.930848 ACTCGAATCGGATTTTGTGTACC 59.069 43.478 4.47 0.00 0.00 3.34
2644 2655 4.181578 CTCGAATCGGATTTTGTGTACCT 58.818 43.478 4.47 0.00 0.00 3.08
2645 2656 5.105635 ACTCGAATCGGATTTTGTGTACCTA 60.106 40.000 4.47 0.00 0.00 3.08
2646 2657 5.722263 TCGAATCGGATTTTGTGTACCTAA 58.278 37.500 4.47 0.00 0.00 2.69
2647 2658 6.342906 TCGAATCGGATTTTGTGTACCTAAT 58.657 36.000 4.47 0.00 0.00 1.73
2648 2659 6.819649 TCGAATCGGATTTTGTGTACCTAATT 59.180 34.615 4.47 0.00 0.00 1.40
2649 2660 7.010738 TCGAATCGGATTTTGTGTACCTAATTC 59.989 37.037 4.47 0.00 0.00 2.17
2650 2661 7.011109 CGAATCGGATTTTGTGTACCTAATTCT 59.989 37.037 4.47 0.00 0.00 2.40
2651 2662 9.321562 GAATCGGATTTTGTGTACCTAATTCTA 57.678 33.333 4.47 0.00 0.00 2.10
2652 2663 9.675464 AATCGGATTTTGTGTACCTAATTCTAA 57.325 29.630 0.00 0.00 0.00 2.10
2653 2664 8.483307 TCGGATTTTGTGTACCTAATTCTAAC 57.517 34.615 0.00 0.00 0.00 2.34
2654 2665 7.276218 TCGGATTTTGTGTACCTAATTCTAACG 59.724 37.037 0.00 0.00 0.00 3.18
2655 2666 7.276218 CGGATTTTGTGTACCTAATTCTAACGA 59.724 37.037 0.00 0.00 0.00 3.85
2656 2667 8.938906 GGATTTTGTGTACCTAATTCTAACGAA 58.061 33.333 0.00 0.00 0.00 3.85
2657 2668 9.750882 GATTTTGTGTACCTAATTCTAACGAAC 57.249 33.333 0.00 0.00 30.67 3.95
2658 2669 8.891671 TTTTGTGTACCTAATTCTAACGAACT 57.108 30.769 0.00 0.00 30.67 3.01
2659 2670 8.891671 TTTGTGTACCTAATTCTAACGAACTT 57.108 30.769 0.00 0.00 30.67 2.66
2660 2671 8.891671 TTGTGTACCTAATTCTAACGAACTTT 57.108 30.769 0.00 0.00 30.67 2.66
2661 2672 8.524870 TGTGTACCTAATTCTAACGAACTTTC 57.475 34.615 0.00 0.00 30.67 2.62
2672 2683 2.311450 CGAACTTTCGTCGTCTGAGA 57.689 50.000 3.13 0.00 45.09 3.27
2673 2684 2.647337 CGAACTTTCGTCGTCTGAGAA 58.353 47.619 3.13 0.00 45.09 2.87
2674 2685 3.040795 CGAACTTTCGTCGTCTGAGAAA 58.959 45.455 3.13 0.00 45.09 2.52
2675 2686 3.669122 CGAACTTTCGTCGTCTGAGAAAT 59.331 43.478 3.13 0.00 45.09 2.17
2676 2687 4.148348 CGAACTTTCGTCGTCTGAGAAATT 59.852 41.667 3.13 0.00 45.09 1.82
2677 2688 5.577860 AACTTTCGTCGTCTGAGAAATTC 57.422 39.130 0.00 0.00 34.00 2.17
2678 2689 4.617959 ACTTTCGTCGTCTGAGAAATTCA 58.382 39.130 0.00 0.00 34.00 2.57
2690 2701 5.594926 CTGAGAAATTCAGTTGGCAAAAGT 58.405 37.500 0.00 0.00 46.77 2.66
2691 2702 5.591099 TGAGAAATTCAGTTGGCAAAAGTC 58.409 37.500 0.00 0.00 0.00 3.01
2692 2703 4.610945 AGAAATTCAGTTGGCAAAAGTCG 58.389 39.130 0.00 0.00 0.00 4.18
2693 2704 4.338118 AGAAATTCAGTTGGCAAAAGTCGA 59.662 37.500 0.00 0.00 0.00 4.20
2694 2705 4.853924 AATTCAGTTGGCAAAAGTCGAT 57.146 36.364 0.00 0.00 0.00 3.59
2695 2706 5.957842 AATTCAGTTGGCAAAAGTCGATA 57.042 34.783 0.00 0.00 0.00 2.92
2696 2707 5.551760 ATTCAGTTGGCAAAAGTCGATAG 57.448 39.130 0.00 0.00 0.00 2.08
2697 2708 2.742053 TCAGTTGGCAAAAGTCGATAGC 59.258 45.455 0.00 0.00 0.00 2.97
2698 2709 1.732259 AGTTGGCAAAAGTCGATAGCG 59.268 47.619 0.00 0.00 39.35 4.26
2699 2710 1.730064 GTTGGCAAAAGTCGATAGCGA 59.270 47.619 0.00 0.00 45.71 4.93
2711 2722 4.750952 TCGATAGCGAGACTGAATAAGG 57.249 45.455 0.00 0.00 42.51 2.69
2712 2723 3.058155 TCGATAGCGAGACTGAATAAGGC 60.058 47.826 0.00 0.00 42.51 4.35
2714 2725 4.557695 CGATAGCGAGACTGAATAAGGCTT 60.558 45.833 4.58 4.58 44.41 4.35
2715 2726 5.334957 CGATAGCGAGACTGAATAAGGCTTA 60.335 44.000 9.79 9.79 44.41 3.09
2716 2727 4.048241 AGCGAGACTGAATAAGGCTTAC 57.952 45.455 9.55 0.00 44.41 2.34
2717 2728 3.447586 AGCGAGACTGAATAAGGCTTACA 59.552 43.478 9.55 3.26 44.41 2.41
2718 2729 3.552294 GCGAGACTGAATAAGGCTTACAC 59.448 47.826 9.55 7.28 44.41 2.90
2719 2730 4.113354 CGAGACTGAATAAGGCTTACACC 58.887 47.826 9.55 2.51 44.41 4.16
2720 2731 4.113354 GAGACTGAATAAGGCTTACACCG 58.887 47.826 9.55 5.87 44.41 4.94
2721 2732 3.514309 AGACTGAATAAGGCTTACACCGT 59.486 43.478 9.55 8.86 44.41 4.83
2722 2733 3.596214 ACTGAATAAGGCTTACACCGTG 58.404 45.455 9.55 0.00 33.69 4.94
2723 2734 3.007614 ACTGAATAAGGCTTACACCGTGT 59.992 43.478 9.55 9.58 33.69 4.49
2724 2735 4.221262 ACTGAATAAGGCTTACACCGTGTA 59.779 41.667 9.55 7.32 33.69 2.90
2725 2736 5.105064 ACTGAATAAGGCTTACACCGTGTAT 60.105 40.000 9.55 0.00 32.20 2.29
2726 2737 6.097270 ACTGAATAAGGCTTACACCGTGTATA 59.903 38.462 9.55 2.25 32.20 1.47
2727 2738 6.876155 TGAATAAGGCTTACACCGTGTATAA 58.124 36.000 9.55 0.00 32.20 0.98
2728 2739 7.502696 TGAATAAGGCTTACACCGTGTATAAT 58.497 34.615 9.55 0.00 32.20 1.28
2729 2740 8.640651 TGAATAAGGCTTACACCGTGTATAATA 58.359 33.333 9.55 3.26 32.20 0.98
2730 2741 9.480053 GAATAAGGCTTACACCGTGTATAATAA 57.520 33.333 9.55 0.00 32.20 1.40
2731 2742 9.835389 AATAAGGCTTACACCGTGTATAATAAA 57.165 29.630 9.55 0.00 32.20 1.40
2732 2743 9.835389 ATAAGGCTTACACCGTGTATAATAAAA 57.165 29.630 9.55 0.00 32.20 1.52
2733 2744 7.543947 AGGCTTACACCGTGTATAATAAAAC 57.456 36.000 12.14 0.00 32.20 2.43
2734 2745 6.539826 AGGCTTACACCGTGTATAATAAAACC 59.460 38.462 12.14 3.50 32.20 3.27
2735 2746 6.539826 GGCTTACACCGTGTATAATAAAACCT 59.460 38.462 12.14 0.00 32.20 3.50
2736 2747 7.066163 GGCTTACACCGTGTATAATAAAACCTT 59.934 37.037 12.14 0.00 32.20 3.50
2737 2748 9.097257 GCTTACACCGTGTATAATAAAACCTTA 57.903 33.333 12.14 0.00 32.20 2.69
2741 2752 8.819974 ACACCGTGTATAATAAAACCTTATTCG 58.180 33.333 1.18 0.00 38.44 3.34
2742 2753 9.033481 CACCGTGTATAATAAAACCTTATTCGA 57.967 33.333 0.00 0.00 38.44 3.71
2743 2754 9.252962 ACCGTGTATAATAAAACCTTATTCGAG 57.747 33.333 0.00 0.00 38.44 4.04
2744 2755 8.706035 CCGTGTATAATAAAACCTTATTCGAGG 58.294 37.037 0.00 0.00 38.44 4.63
2745 2756 8.706035 CGTGTATAATAAAACCTTATTCGAGGG 58.294 37.037 0.00 0.00 41.31 4.30
2746 2757 8.996271 GTGTATAATAAAACCTTATTCGAGGGG 58.004 37.037 0.00 0.00 41.31 4.79
2747 2758 8.158789 TGTATAATAAAACCTTATTCGAGGGGG 58.841 37.037 0.00 0.00 41.31 5.40
2748 2759 5.720486 AATAAAACCTTATTCGAGGGGGA 57.280 39.130 0.00 0.00 41.31 4.81
2749 2760 3.646736 AAAACCTTATTCGAGGGGGAG 57.353 47.619 0.00 0.00 41.31 4.30
2750 2761 1.508256 AACCTTATTCGAGGGGGAGG 58.492 55.000 0.00 2.80 41.31 4.30
2751 2762 0.400093 ACCTTATTCGAGGGGGAGGG 60.400 60.000 7.14 0.00 41.31 4.30
2752 2763 0.400093 CCTTATTCGAGGGGGAGGGT 60.400 60.000 0.00 0.00 32.94 4.34
2753 2764 0.759346 CTTATTCGAGGGGGAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
2754 2765 0.043637 TTATTCGAGGGGGAGGGTGT 59.956 55.000 0.00 0.00 0.00 4.16
2755 2766 0.689745 TATTCGAGGGGGAGGGTGTG 60.690 60.000 0.00 0.00 0.00 3.82
2756 2767 2.471084 ATTCGAGGGGGAGGGTGTGA 62.471 60.000 0.00 0.00 0.00 3.58
2757 2768 3.077556 CGAGGGGGAGGGTGTGAG 61.078 72.222 0.00 0.00 0.00 3.51
2758 2769 2.122954 GAGGGGGAGGGTGTGAGT 59.877 66.667 0.00 0.00 0.00 3.41
2759 2770 1.390926 GAGGGGGAGGGTGTGAGTA 59.609 63.158 0.00 0.00 0.00 2.59
2760 2771 0.688087 GAGGGGGAGGGTGTGAGTAG 60.688 65.000 0.00 0.00 0.00 2.57
2761 2772 1.689582 GGGGGAGGGTGTGAGTAGG 60.690 68.421 0.00 0.00 0.00 3.18
2762 2773 1.080538 GGGGAGGGTGTGAGTAGGT 59.919 63.158 0.00 0.00 0.00 3.08
2763 2774 1.265454 GGGGAGGGTGTGAGTAGGTG 61.265 65.000 0.00 0.00 0.00 4.00
2764 2775 1.265454 GGGAGGGTGTGAGTAGGTGG 61.265 65.000 0.00 0.00 0.00 4.61
2765 2776 0.544595 GGAGGGTGTGAGTAGGTGGT 60.545 60.000 0.00 0.00 0.00 4.16
2766 2777 1.349067 GAGGGTGTGAGTAGGTGGTT 58.651 55.000 0.00 0.00 0.00 3.67
2767 2778 1.002087 GAGGGTGTGAGTAGGTGGTTG 59.998 57.143 0.00 0.00 0.00 3.77
2768 2779 0.036306 GGGTGTGAGTAGGTGGTTGG 59.964 60.000 0.00 0.00 0.00 3.77
2769 2780 1.053424 GGTGTGAGTAGGTGGTTGGA 58.947 55.000 0.00 0.00 0.00 3.53
2770 2781 1.628846 GGTGTGAGTAGGTGGTTGGAT 59.371 52.381 0.00 0.00 0.00 3.41
2771 2782 2.039879 GGTGTGAGTAGGTGGTTGGATT 59.960 50.000 0.00 0.00 0.00 3.01
2772 2783 3.262405 GGTGTGAGTAGGTGGTTGGATTA 59.738 47.826 0.00 0.00 0.00 1.75
2773 2784 4.251268 GTGTGAGTAGGTGGTTGGATTAC 58.749 47.826 0.00 0.00 0.00 1.89
2774 2785 4.020485 GTGTGAGTAGGTGGTTGGATTACT 60.020 45.833 0.00 0.00 0.00 2.24
2775 2786 4.020573 TGTGAGTAGGTGGTTGGATTACTG 60.021 45.833 0.00 0.00 0.00 2.74
2776 2787 4.020485 GTGAGTAGGTGGTTGGATTACTGT 60.020 45.833 0.00 0.00 0.00 3.55
2777 2788 4.020573 TGAGTAGGTGGTTGGATTACTGTG 60.021 45.833 0.00 0.00 0.00 3.66
2778 2789 4.164981 AGTAGGTGGTTGGATTACTGTGA 58.835 43.478 0.00 0.00 0.00 3.58
2779 2790 4.595781 AGTAGGTGGTTGGATTACTGTGAA 59.404 41.667 0.00 0.00 0.00 3.18
2780 2791 4.021102 AGGTGGTTGGATTACTGTGAAG 57.979 45.455 0.00 0.00 0.00 3.02
2781 2792 3.081804 GGTGGTTGGATTACTGTGAAGG 58.918 50.000 0.00 0.00 0.00 3.46
2782 2793 3.497942 GGTGGTTGGATTACTGTGAAGGT 60.498 47.826 0.00 0.00 0.00 3.50
2783 2794 3.751698 GTGGTTGGATTACTGTGAAGGTC 59.248 47.826 0.00 0.00 0.00 3.85
2784 2795 3.650942 TGGTTGGATTACTGTGAAGGTCT 59.349 43.478 0.00 0.00 0.00 3.85
2785 2796 4.254492 GGTTGGATTACTGTGAAGGTCTC 58.746 47.826 0.00 0.00 0.00 3.36
2786 2797 4.020128 GGTTGGATTACTGTGAAGGTCTCT 60.020 45.833 0.00 0.00 0.00 3.10
2787 2798 5.187186 GGTTGGATTACTGTGAAGGTCTCTA 59.813 44.000 0.00 0.00 0.00 2.43
2788 2799 6.127026 GGTTGGATTACTGTGAAGGTCTCTAT 60.127 42.308 0.00 0.00 0.00 1.98
2789 2800 6.471233 TGGATTACTGTGAAGGTCTCTATG 57.529 41.667 0.00 0.00 0.00 2.23
2790 2801 6.194967 TGGATTACTGTGAAGGTCTCTATGA 58.805 40.000 0.00 0.00 0.00 2.15
2791 2802 6.322456 TGGATTACTGTGAAGGTCTCTATGAG 59.678 42.308 0.00 0.00 0.00 2.90
2792 2803 5.584253 TTACTGTGAAGGTCTCTATGAGC 57.416 43.478 0.00 0.00 43.05 4.26
2800 2811 1.069978 GGTCTCTATGAGCTTGAGGGC 59.930 57.143 0.00 0.00 39.86 5.19
2801 2812 1.759445 GTCTCTATGAGCTTGAGGGCA 59.241 52.381 0.00 0.00 34.17 5.36
2802 2813 2.037901 TCTCTATGAGCTTGAGGGCAG 58.962 52.381 0.00 0.00 34.17 4.85
2803 2814 1.761784 CTCTATGAGCTTGAGGGCAGT 59.238 52.381 0.00 0.00 34.17 4.40
2804 2815 1.483827 TCTATGAGCTTGAGGGCAGTG 59.516 52.381 0.00 0.00 34.17 3.66
2805 2816 1.483827 CTATGAGCTTGAGGGCAGTGA 59.516 52.381 0.00 0.00 34.17 3.41
2806 2817 0.694771 ATGAGCTTGAGGGCAGTGAA 59.305 50.000 0.00 0.00 34.17 3.18
2807 2818 0.035881 TGAGCTTGAGGGCAGTGAAG 59.964 55.000 0.00 0.00 34.17 3.02
2808 2819 0.322975 GAGCTTGAGGGCAGTGAAGA 59.677 55.000 0.00 0.00 34.17 2.87
2809 2820 0.036022 AGCTTGAGGGCAGTGAAGAC 59.964 55.000 0.00 0.00 34.17 3.01
2810 2821 0.036022 GCTTGAGGGCAGTGAAGACT 59.964 55.000 0.00 0.00 0.00 3.24
2811 2822 1.276421 GCTTGAGGGCAGTGAAGACTA 59.724 52.381 0.00 0.00 0.00 2.59
2812 2823 2.093235 GCTTGAGGGCAGTGAAGACTAT 60.093 50.000 0.00 0.00 0.00 2.12
2813 2824 3.620966 GCTTGAGGGCAGTGAAGACTATT 60.621 47.826 0.00 0.00 0.00 1.73
2814 2825 3.616956 TGAGGGCAGTGAAGACTATTG 57.383 47.619 0.00 0.00 0.00 1.90
2815 2826 2.906389 TGAGGGCAGTGAAGACTATTGT 59.094 45.455 0.00 0.00 0.00 2.71
2816 2827 3.055819 TGAGGGCAGTGAAGACTATTGTC 60.056 47.826 0.00 0.00 43.22 3.18
2831 2842 7.130303 GACTATTGTCTCCACCACTAAAAAC 57.870 40.000 0.00 0.00 39.94 2.43
2832 2843 5.699458 ACTATTGTCTCCACCACTAAAAACG 59.301 40.000 0.00 0.00 0.00 3.60
2833 2844 3.547054 TGTCTCCACCACTAAAAACGT 57.453 42.857 0.00 0.00 0.00 3.99
2834 2845 3.199677 TGTCTCCACCACTAAAAACGTG 58.800 45.455 0.00 0.00 0.00 4.49
2835 2846 3.200483 GTCTCCACCACTAAAAACGTGT 58.800 45.455 0.00 0.00 0.00 4.49
2836 2847 4.141981 TGTCTCCACCACTAAAAACGTGTA 60.142 41.667 0.00 0.00 0.00 2.90
2837 2848 4.810491 GTCTCCACCACTAAAAACGTGTAA 59.190 41.667 0.00 0.00 0.00 2.41
2838 2849 5.467735 GTCTCCACCACTAAAAACGTGTAAT 59.532 40.000 0.00 0.00 0.00 1.89
2839 2850 6.646240 GTCTCCACCACTAAAAACGTGTAATA 59.354 38.462 0.00 0.00 0.00 0.98
2840 2851 6.646240 TCTCCACCACTAAAAACGTGTAATAC 59.354 38.462 0.00 0.00 0.00 1.89
2841 2852 6.523840 TCCACCACTAAAAACGTGTAATACT 58.476 36.000 0.00 0.00 0.00 2.12
2842 2853 6.646240 TCCACCACTAAAAACGTGTAATACTC 59.354 38.462 0.00 0.00 0.00 2.59
2843 2854 6.400303 CCACCACTAAAAACGTGTAATACTCG 60.400 42.308 12.51 12.51 40.48 4.18
2844 2855 5.119125 ACCACTAAAAACGTGTAATACTCGC 59.881 40.000 13.78 0.00 38.50 5.03
2845 2856 5.346822 CCACTAAAAACGTGTAATACTCGCT 59.653 40.000 13.78 0.11 38.50 4.93
2846 2857 6.128742 CCACTAAAAACGTGTAATACTCGCTT 60.129 38.462 13.78 6.28 38.50 4.68
2847 2858 7.062138 CCACTAAAAACGTGTAATACTCGCTTA 59.938 37.037 13.78 8.79 38.50 3.09
2848 2859 8.427012 CACTAAAAACGTGTAATACTCGCTTAA 58.573 33.333 13.78 1.73 38.50 1.85
2849 2860 8.977505 ACTAAAAACGTGTAATACTCGCTTAAA 58.022 29.630 13.78 1.44 38.50 1.52
2850 2861 9.456797 CTAAAAACGTGTAATACTCGCTTAAAG 57.543 33.333 13.78 6.50 38.50 1.85
2851 2862 7.412137 AAAACGTGTAATACTCGCTTAAAGT 57.588 32.000 13.78 0.00 38.50 2.66
2852 2863 6.385537 AACGTGTAATACTCGCTTAAAGTG 57.614 37.500 13.78 0.00 38.50 3.16
2853 2864 5.702865 ACGTGTAATACTCGCTTAAAGTGA 58.297 37.500 13.78 0.00 38.50 3.41
2854 2865 6.327934 ACGTGTAATACTCGCTTAAAGTGAT 58.672 36.000 13.78 0.00 38.50 3.06
2855 2866 7.475015 ACGTGTAATACTCGCTTAAAGTGATA 58.525 34.615 13.78 0.00 38.50 2.15
2856 2867 7.970061 ACGTGTAATACTCGCTTAAAGTGATAA 59.030 33.333 13.78 0.00 38.50 1.75
2857 2868 8.800972 CGTGTAATACTCGCTTAAAGTGATAAA 58.199 33.333 1.92 0.00 33.80 1.40
2863 2874 7.907214 ACTCGCTTAAAGTGATAAAATCTGT 57.093 32.000 0.00 0.00 33.80 3.41
2864 2875 7.965045 ACTCGCTTAAAGTGATAAAATCTGTC 58.035 34.615 0.00 0.00 33.80 3.51
2865 2876 6.989437 TCGCTTAAAGTGATAAAATCTGTCG 58.011 36.000 0.00 0.00 28.30 4.35
2866 2877 6.809689 TCGCTTAAAGTGATAAAATCTGTCGA 59.190 34.615 0.00 0.00 28.30 4.20
2867 2878 7.009265 TCGCTTAAAGTGATAAAATCTGTCGAG 59.991 37.037 0.00 0.00 28.30 4.04
2868 2879 7.402640 GCTTAAAGTGATAAAATCTGTCGAGG 58.597 38.462 0.00 0.00 0.00 4.63
2869 2880 7.277981 GCTTAAAGTGATAAAATCTGTCGAGGA 59.722 37.037 0.00 0.00 0.00 3.71
2870 2881 9.151471 CTTAAAGTGATAAAATCTGTCGAGGAA 57.849 33.333 0.00 0.00 0.00 3.36
2871 2882 7.979444 AAAGTGATAAAATCTGTCGAGGAAA 57.021 32.000 0.00 0.00 0.00 3.13
2872 2883 6.969828 AGTGATAAAATCTGTCGAGGAAAC 57.030 37.500 0.00 0.00 0.00 2.78
2873 2884 6.464222 AGTGATAAAATCTGTCGAGGAAACA 58.536 36.000 0.00 0.00 0.00 2.83
2874 2885 7.106239 AGTGATAAAATCTGTCGAGGAAACAT 58.894 34.615 0.00 0.00 0.00 2.71
2875 2886 8.258007 AGTGATAAAATCTGTCGAGGAAACATA 58.742 33.333 0.00 0.00 0.00 2.29
2876 2887 8.879759 GTGATAAAATCTGTCGAGGAAACATAA 58.120 33.333 0.00 0.00 0.00 1.90
2877 2888 9.098355 TGATAAAATCTGTCGAGGAAACATAAG 57.902 33.333 0.00 0.00 0.00 1.73
2878 2889 5.803020 AAATCTGTCGAGGAAACATAAGC 57.197 39.130 0.00 0.00 0.00 3.09
2879 2890 3.953712 TCTGTCGAGGAAACATAAGCA 57.046 42.857 0.00 0.00 0.00 3.91
2880 2891 3.849911 TCTGTCGAGGAAACATAAGCAG 58.150 45.455 0.00 0.00 0.00 4.24
2881 2892 3.258372 TCTGTCGAGGAAACATAAGCAGT 59.742 43.478 0.00 0.00 0.00 4.40
2882 2893 3.997021 CTGTCGAGGAAACATAAGCAGTT 59.003 43.478 0.00 0.00 0.00 3.16
2883 2894 4.385825 TGTCGAGGAAACATAAGCAGTTT 58.614 39.130 0.00 0.00 41.53 2.66
2893 2904 7.510549 AAACATAAGCAGTTTCATGTGTAGT 57.489 32.000 0.00 0.00 34.27 2.73
2894 2905 6.486253 ACATAAGCAGTTTCATGTGTAGTG 57.514 37.500 0.00 0.00 30.64 2.74
2895 2906 6.230472 ACATAAGCAGTTTCATGTGTAGTGA 58.770 36.000 0.00 0.00 30.64 3.41
2896 2907 6.881065 ACATAAGCAGTTTCATGTGTAGTGAT 59.119 34.615 0.00 0.00 30.64 3.06
2897 2908 5.869753 AAGCAGTTTCATGTGTAGTGATC 57.130 39.130 0.00 0.00 0.00 2.92
2898 2909 5.157940 AGCAGTTTCATGTGTAGTGATCT 57.842 39.130 0.00 0.00 0.00 2.75
2899 2910 5.174395 AGCAGTTTCATGTGTAGTGATCTC 58.826 41.667 0.00 0.00 0.00 2.75
2900 2911 5.046735 AGCAGTTTCATGTGTAGTGATCTCT 60.047 40.000 2.38 2.38 0.00 3.10
2901 2912 5.063186 GCAGTTTCATGTGTAGTGATCTCTG 59.937 44.000 7.56 0.00 0.00 3.35
2902 2913 6.162079 CAGTTTCATGTGTAGTGATCTCTGT 58.838 40.000 7.56 0.00 0.00 3.41
2903 2914 6.648310 CAGTTTCATGTGTAGTGATCTCTGTT 59.352 38.462 7.56 0.00 0.00 3.16
2904 2915 6.870965 AGTTTCATGTGTAGTGATCTCTGTTC 59.129 38.462 7.56 0.00 0.00 3.18
2905 2916 5.982890 TCATGTGTAGTGATCTCTGTTCA 57.017 39.130 7.56 4.33 0.00 3.18
2906 2917 6.535963 TCATGTGTAGTGATCTCTGTTCAT 57.464 37.500 7.56 6.19 0.00 2.57
2907 2918 6.335777 TCATGTGTAGTGATCTCTGTTCATG 58.664 40.000 19.64 19.64 0.00 3.07
2908 2919 5.077134 TGTGTAGTGATCTCTGTTCATGG 57.923 43.478 7.56 0.00 0.00 3.66
2909 2920 4.772100 TGTGTAGTGATCTCTGTTCATGGA 59.228 41.667 7.56 0.00 0.00 3.41
2910 2921 5.105595 TGTGTAGTGATCTCTGTTCATGGAG 60.106 44.000 7.56 0.00 0.00 3.86
2911 2922 5.126222 GTGTAGTGATCTCTGTTCATGGAGA 59.874 44.000 7.56 2.42 41.88 3.71
2924 2935 1.817087 ATGGAGATCATGAGGCCACT 58.183 50.000 5.01 3.27 34.22 4.00
2925 2936 0.835276 TGGAGATCATGAGGCCACTG 59.165 55.000 5.01 0.00 0.00 3.66
2926 2937 1.126488 GGAGATCATGAGGCCACTGA 58.874 55.000 5.01 4.77 0.00 3.41
2927 2938 1.202627 GGAGATCATGAGGCCACTGAC 60.203 57.143 5.01 0.21 0.00 3.51
2928 2939 1.483827 GAGATCATGAGGCCACTGACA 59.516 52.381 5.01 0.00 0.00 3.58
2929 2940 1.209019 AGATCATGAGGCCACTGACAC 59.791 52.381 5.01 3.18 0.00 3.67
2930 2941 0.254178 ATCATGAGGCCACTGACACC 59.746 55.000 5.01 0.00 0.00 4.16
2931 2942 1.377725 CATGAGGCCACTGACACCC 60.378 63.158 5.01 0.00 0.00 4.61
2932 2943 1.539869 ATGAGGCCACTGACACCCT 60.540 57.895 5.01 0.00 0.00 4.34
2933 2944 1.136329 ATGAGGCCACTGACACCCTT 61.136 55.000 5.01 0.00 0.00 3.95
2934 2945 0.472925 TGAGGCCACTGACACCCTTA 60.473 55.000 5.01 0.00 0.00 2.69
2935 2946 0.912486 GAGGCCACTGACACCCTTAT 59.088 55.000 5.01 0.00 0.00 1.73
2936 2947 0.620556 AGGCCACTGACACCCTTATG 59.379 55.000 5.01 0.00 0.00 1.90
2937 2948 0.394352 GGCCACTGACACCCTTATGG 60.394 60.000 0.00 0.00 41.37 2.74
2951 2962 4.141990 CCTTATGGGTAGGTGGGATAGA 57.858 50.000 0.00 0.00 0.00 1.98
2952 2963 4.499472 CCTTATGGGTAGGTGGGATAGAA 58.501 47.826 0.00 0.00 0.00 2.10
2953 2964 4.532521 CCTTATGGGTAGGTGGGATAGAAG 59.467 50.000 0.00 0.00 0.00 2.85
2954 2965 5.403512 CTTATGGGTAGGTGGGATAGAAGA 58.596 45.833 0.00 0.00 0.00 2.87
2955 2966 3.330126 TGGGTAGGTGGGATAGAAGAG 57.670 52.381 0.00 0.00 0.00 2.85
2956 2967 2.590611 TGGGTAGGTGGGATAGAAGAGT 59.409 50.000 0.00 0.00 0.00 3.24
2957 2968 2.966516 GGGTAGGTGGGATAGAAGAGTG 59.033 54.545 0.00 0.00 0.00 3.51
2958 2969 2.966516 GGTAGGTGGGATAGAAGAGTGG 59.033 54.545 0.00 0.00 0.00 4.00
2959 2970 2.182516 AGGTGGGATAGAAGAGTGGG 57.817 55.000 0.00 0.00 0.00 4.61
2960 2971 1.366435 AGGTGGGATAGAAGAGTGGGT 59.634 52.381 0.00 0.00 0.00 4.51
2961 2972 2.590611 AGGTGGGATAGAAGAGTGGGTA 59.409 50.000 0.00 0.00 0.00 3.69
2962 2973 3.210074 AGGTGGGATAGAAGAGTGGGTAT 59.790 47.826 0.00 0.00 0.00 2.73
2963 2974 3.325135 GGTGGGATAGAAGAGTGGGTATG 59.675 52.174 0.00 0.00 0.00 2.39
2964 2975 3.967987 GTGGGATAGAAGAGTGGGTATGT 59.032 47.826 0.00 0.00 0.00 2.29
2965 2976 3.967326 TGGGATAGAAGAGTGGGTATGTG 59.033 47.826 0.00 0.00 0.00 3.21
2966 2977 3.325135 GGGATAGAAGAGTGGGTATGTGG 59.675 52.174 0.00 0.00 0.00 4.17
2967 2978 3.325135 GGATAGAAGAGTGGGTATGTGGG 59.675 52.174 0.00 0.00 0.00 4.61
2968 2979 0.912486 AGAAGAGTGGGTATGTGGGC 59.088 55.000 0.00 0.00 0.00 5.36
2969 2980 0.912486 GAAGAGTGGGTATGTGGGCT 59.088 55.000 0.00 0.00 0.00 5.19
2970 2981 1.282157 GAAGAGTGGGTATGTGGGCTT 59.718 52.381 0.00 0.00 0.00 4.35
2971 2982 0.912486 AGAGTGGGTATGTGGGCTTC 59.088 55.000 0.00 0.00 0.00 3.86
2972 2983 0.912486 GAGTGGGTATGTGGGCTTCT 59.088 55.000 0.00 0.00 0.00 2.85
2973 2984 2.116238 GAGTGGGTATGTGGGCTTCTA 58.884 52.381 0.00 0.00 0.00 2.10
2974 2985 2.706190 GAGTGGGTATGTGGGCTTCTAT 59.294 50.000 0.00 0.00 0.00 1.98
2975 2986 2.706190 AGTGGGTATGTGGGCTTCTATC 59.294 50.000 0.00 0.00 0.00 2.08
2976 2987 2.438021 GTGGGTATGTGGGCTTCTATCA 59.562 50.000 0.00 0.00 0.00 2.15
2977 2988 3.118038 GTGGGTATGTGGGCTTCTATCAA 60.118 47.826 0.00 0.00 0.00 2.57
2978 2989 3.525609 TGGGTATGTGGGCTTCTATCAAA 59.474 43.478 0.00 0.00 0.00 2.69
2979 2990 4.017958 TGGGTATGTGGGCTTCTATCAAAA 60.018 41.667 0.00 0.00 0.00 2.44
2980 2991 4.580580 GGGTATGTGGGCTTCTATCAAAAG 59.419 45.833 0.00 0.00 0.00 2.27
2981 2992 5.437060 GGTATGTGGGCTTCTATCAAAAGA 58.563 41.667 0.00 0.00 0.00 2.52
2982 2993 6.064717 GGTATGTGGGCTTCTATCAAAAGAT 58.935 40.000 0.00 0.00 0.00 2.40
2983 2994 7.224297 GGTATGTGGGCTTCTATCAAAAGATA 58.776 38.462 0.00 0.00 0.00 1.98
2984 2995 7.173390 GGTATGTGGGCTTCTATCAAAAGATAC 59.827 40.741 0.00 0.00 0.00 2.24
2985 2996 5.437060 TGTGGGCTTCTATCAAAAGATACC 58.563 41.667 0.00 0.00 0.00 2.73
2986 2997 4.511826 GTGGGCTTCTATCAAAAGATACCG 59.488 45.833 0.00 0.00 0.00 4.02
2987 2998 3.498777 GGGCTTCTATCAAAAGATACCGC 59.501 47.826 0.00 0.00 0.00 5.68
2988 2999 4.381411 GGCTTCTATCAAAAGATACCGCT 58.619 43.478 0.00 0.00 0.00 5.52
2989 3000 4.449405 GGCTTCTATCAAAAGATACCGCTC 59.551 45.833 0.00 0.00 0.00 5.03
2990 3001 4.449405 GCTTCTATCAAAAGATACCGCTCC 59.551 45.833 0.00 0.00 0.00 4.70
2991 3002 5.740513 GCTTCTATCAAAAGATACCGCTCCT 60.741 44.000 0.00 0.00 0.00 3.69
2992 3003 6.516860 GCTTCTATCAAAAGATACCGCTCCTA 60.517 42.308 0.00 0.00 0.00 2.94
2993 3004 7.540474 TTCTATCAAAAGATACCGCTCCTAT 57.460 36.000 0.00 0.00 0.00 2.57
2994 3005 7.159322 TCTATCAAAAGATACCGCTCCTATC 57.841 40.000 0.00 0.00 0.00 2.08
2995 3006 4.238761 TCAAAAGATACCGCTCCTATCG 57.761 45.455 0.00 0.00 0.00 2.92
2996 3007 2.726832 AAAGATACCGCTCCTATCGC 57.273 50.000 0.00 0.00 0.00 4.58
2997 3008 0.889306 AAGATACCGCTCCTATCGCC 59.111 55.000 0.00 0.00 0.00 5.54
2998 3009 0.251209 AGATACCGCTCCTATCGCCA 60.251 55.000 0.00 0.00 0.00 5.69
2999 3010 0.171455 GATACCGCTCCTATCGCCAG 59.829 60.000 0.00 0.00 0.00 4.85
3000 3011 0.539901 ATACCGCTCCTATCGCCAGT 60.540 55.000 0.00 0.00 0.00 4.00
3001 3012 1.452953 TACCGCTCCTATCGCCAGTG 61.453 60.000 0.00 0.00 0.00 3.66
3002 3013 2.028190 CGCTCCTATCGCCAGTGG 59.972 66.667 4.20 4.20 0.00 4.00
3003 3014 2.280457 GCTCCTATCGCCAGTGGC 60.280 66.667 25.07 25.07 46.75 5.01
3044 3055 3.161450 GGGGGCCGAGTGATGCTA 61.161 66.667 0.00 0.00 0.00 3.49
3045 3056 2.742116 GGGGGCCGAGTGATGCTAA 61.742 63.158 0.00 0.00 0.00 3.09
3046 3057 1.223487 GGGGCCGAGTGATGCTAAA 59.777 57.895 0.00 0.00 0.00 1.85
3047 3058 0.393808 GGGGCCGAGTGATGCTAAAA 60.394 55.000 0.00 0.00 0.00 1.52
3048 3059 0.733150 GGGCCGAGTGATGCTAAAAC 59.267 55.000 0.00 0.00 0.00 2.43
3049 3060 1.679032 GGGCCGAGTGATGCTAAAACT 60.679 52.381 0.00 0.00 0.00 2.66
3050 3061 1.398390 GGCCGAGTGATGCTAAAACTG 59.602 52.381 0.00 0.00 0.00 3.16
3051 3062 2.346803 GCCGAGTGATGCTAAAACTGA 58.653 47.619 0.00 0.00 0.00 3.41
3052 3063 2.939103 GCCGAGTGATGCTAAAACTGAT 59.061 45.455 0.00 0.00 0.00 2.90
3053 3064 3.001736 GCCGAGTGATGCTAAAACTGATC 59.998 47.826 0.00 0.00 0.00 2.92
3054 3065 3.243877 CCGAGTGATGCTAAAACTGATCG 59.756 47.826 0.00 0.00 0.00 3.69
3055 3066 3.243877 CGAGTGATGCTAAAACTGATCGG 59.756 47.826 0.00 0.00 0.00 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.663523 CACAACCCTTAGATATGAAACCCTTT 59.336 38.462 0.00 0.00 0.00 3.11
1 2 6.011981 TCACAACCCTTAGATATGAAACCCTT 60.012 38.462 0.00 0.00 0.00 3.95
2 3 5.491078 TCACAACCCTTAGATATGAAACCCT 59.509 40.000 0.00 0.00 0.00 4.34
3 4 5.751586 TCACAACCCTTAGATATGAAACCC 58.248 41.667 0.00 0.00 0.00 4.11
4 5 7.661847 CCTATCACAACCCTTAGATATGAAACC 59.338 40.741 0.00 0.00 0.00 3.27
5 6 7.173390 GCCTATCACAACCCTTAGATATGAAAC 59.827 40.741 0.00 0.00 0.00 2.78
6 7 7.072454 AGCCTATCACAACCCTTAGATATGAAA 59.928 37.037 0.00 0.00 0.00 2.69
7 8 6.558775 AGCCTATCACAACCCTTAGATATGAA 59.441 38.462 0.00 0.00 0.00 2.57
8 9 6.084738 AGCCTATCACAACCCTTAGATATGA 58.915 40.000 0.00 0.00 0.00 2.15
9 10 6.365970 AGCCTATCACAACCCTTAGATATG 57.634 41.667 0.00 0.00 0.00 1.78
10 11 6.240002 CCAAGCCTATCACAACCCTTAGATAT 60.240 42.308 0.00 0.00 0.00 1.63
11 12 5.071788 CCAAGCCTATCACAACCCTTAGATA 59.928 44.000 0.00 0.00 0.00 1.98
12 13 4.141390 CCAAGCCTATCACAACCCTTAGAT 60.141 45.833 0.00 0.00 0.00 1.98
13 14 3.199946 CCAAGCCTATCACAACCCTTAGA 59.800 47.826 0.00 0.00 0.00 2.10
14 15 3.545703 CCAAGCCTATCACAACCCTTAG 58.454 50.000 0.00 0.00 0.00 2.18
15 16 2.356741 GCCAAGCCTATCACAACCCTTA 60.357 50.000 0.00 0.00 0.00 2.69
16 17 1.616994 GCCAAGCCTATCACAACCCTT 60.617 52.381 0.00 0.00 0.00 3.95
17 18 0.034089 GCCAAGCCTATCACAACCCT 60.034 55.000 0.00 0.00 0.00 4.34
18 19 1.376609 CGCCAAGCCTATCACAACCC 61.377 60.000 0.00 0.00 0.00 4.11
19 20 0.392461 TCGCCAAGCCTATCACAACC 60.392 55.000 0.00 0.00 0.00 3.77
20 21 1.009829 CTCGCCAAGCCTATCACAAC 58.990 55.000 0.00 0.00 0.00 3.32
21 22 0.744414 GCTCGCCAAGCCTATCACAA 60.744 55.000 0.00 0.00 45.92 3.33
22 23 1.153369 GCTCGCCAAGCCTATCACA 60.153 57.895 0.00 0.00 45.92 3.58
23 24 3.724494 GCTCGCCAAGCCTATCAC 58.276 61.111 0.00 0.00 45.92 3.06
33 34 0.308376 GTTTTTACGTTGGCTCGCCA 59.692 50.000 6.52 6.52 45.63 5.69
34 35 0.589708 AGTTTTTACGTTGGCTCGCC 59.410 50.000 0.00 0.00 0.00 5.54
35 36 2.723923 GCTAGTTTTTACGTTGGCTCGC 60.724 50.000 0.00 0.00 0.00 5.03
36 37 2.159747 GGCTAGTTTTTACGTTGGCTCG 60.160 50.000 0.00 1.70 0.00 5.03
37 38 2.809696 TGGCTAGTTTTTACGTTGGCTC 59.190 45.455 0.00 0.00 0.00 4.70
38 39 2.812011 CTGGCTAGTTTTTACGTTGGCT 59.188 45.455 0.00 0.00 0.00 4.75
39 40 2.551032 ACTGGCTAGTTTTTACGTTGGC 59.449 45.455 0.00 0.00 31.66 4.52
40 41 3.187842 GGACTGGCTAGTTTTTACGTTGG 59.812 47.826 3.47 0.00 37.25 3.77
41 42 4.062991 AGGACTGGCTAGTTTTTACGTTG 58.937 43.478 3.47 0.00 37.25 4.10
42 43 4.347360 AGGACTGGCTAGTTTTTACGTT 57.653 40.909 3.47 0.00 37.25 3.99
43 44 4.347360 AAGGACTGGCTAGTTTTTACGT 57.653 40.909 3.47 0.00 37.25 3.57
44 45 4.083484 CCAAAGGACTGGCTAGTTTTTACG 60.083 45.833 3.47 0.00 37.25 3.18
45 46 4.217767 CCCAAAGGACTGGCTAGTTTTTAC 59.782 45.833 3.47 0.00 37.25 2.01
46 47 4.141111 ACCCAAAGGACTGGCTAGTTTTTA 60.141 41.667 3.47 0.00 37.25 1.52
47 48 3.230976 CCCAAAGGACTGGCTAGTTTTT 58.769 45.455 3.47 6.04 37.25 1.94
48 49 2.177016 ACCCAAAGGACTGGCTAGTTTT 59.823 45.455 3.47 0.00 37.25 2.43
49 50 1.780919 ACCCAAAGGACTGGCTAGTTT 59.219 47.619 3.47 0.00 37.25 2.66
50 51 1.446016 ACCCAAAGGACTGGCTAGTT 58.554 50.000 3.47 0.00 37.25 2.24
51 52 2.337359 TACCCAAAGGACTGGCTAGT 57.663 50.000 0.69 0.69 40.66 2.57
52 53 2.771943 TCATACCCAAAGGACTGGCTAG 59.228 50.000 0.00 0.00 34.88 3.42
53 54 2.840511 TCATACCCAAAGGACTGGCTA 58.159 47.619 0.00 0.00 34.88 3.93
54 55 1.668826 TCATACCCAAAGGACTGGCT 58.331 50.000 0.00 0.00 34.88 4.75
55 56 2.492088 GTTTCATACCCAAAGGACTGGC 59.508 50.000 0.00 0.00 34.88 4.85
56 57 3.089284 GGTTTCATACCCAAAGGACTGG 58.911 50.000 0.00 0.00 41.43 4.00
77 78 4.073293 AGTACTATTCTCGCCCAAATGG 57.927 45.455 0.00 0.00 37.09 3.16
78 79 5.010719 TCCTAGTACTATTCTCGCCCAAATG 59.989 44.000 2.33 0.00 0.00 2.32
79 80 5.145564 TCCTAGTACTATTCTCGCCCAAAT 58.854 41.667 2.33 0.00 0.00 2.32
80 81 4.539726 TCCTAGTACTATTCTCGCCCAAA 58.460 43.478 2.33 0.00 0.00 3.28
81 82 4.174704 TCCTAGTACTATTCTCGCCCAA 57.825 45.455 2.33 0.00 0.00 4.12
82 83 3.870538 TCCTAGTACTATTCTCGCCCA 57.129 47.619 2.33 0.00 0.00 5.36
83 84 3.444388 CCATCCTAGTACTATTCTCGCCC 59.556 52.174 2.33 0.00 0.00 6.13
84 85 3.444388 CCCATCCTAGTACTATTCTCGCC 59.556 52.174 2.33 0.00 0.00 5.54
85 86 4.080687 ACCCATCCTAGTACTATTCTCGC 58.919 47.826 2.33 0.00 0.00 5.03
86 87 5.181622 GTCACCCATCCTAGTACTATTCTCG 59.818 48.000 2.33 0.00 0.00 4.04
87 88 5.477637 GGTCACCCATCCTAGTACTATTCTC 59.522 48.000 2.33 0.00 0.00 2.87
88 89 5.136392 AGGTCACCCATCCTAGTACTATTCT 59.864 44.000 2.33 0.00 31.66 2.40
89 90 5.395611 AGGTCACCCATCCTAGTACTATTC 58.604 45.833 2.33 0.00 31.66 1.75
90 91 5.395611 GAGGTCACCCATCCTAGTACTATT 58.604 45.833 2.33 0.00 33.83 1.73
91 92 4.202695 GGAGGTCACCCATCCTAGTACTAT 60.203 50.000 2.33 0.00 33.83 2.12
92 93 3.139770 GGAGGTCACCCATCCTAGTACTA 59.860 52.174 1.89 1.89 33.83 1.82
93 94 2.091222 GGAGGTCACCCATCCTAGTACT 60.091 54.545 0.00 0.00 33.83 2.73
94 95 2.091222 AGGAGGTCACCCATCCTAGTAC 60.091 54.545 2.60 0.00 36.91 2.73
95 96 2.091278 CAGGAGGTCACCCATCCTAGTA 60.091 54.545 4.27 0.00 36.69 1.82
96 97 1.019650 AGGAGGTCACCCATCCTAGT 58.980 55.000 2.60 0.00 36.91 2.57
97 98 1.418334 CAGGAGGTCACCCATCCTAG 58.582 60.000 4.27 0.00 36.69 3.02
98 99 0.031111 CCAGGAGGTCACCCATCCTA 60.031 60.000 4.27 0.00 36.69 2.94
99 100 1.307343 CCAGGAGGTCACCCATCCT 60.307 63.158 0.00 0.00 38.30 3.24
100 101 2.378634 CCCAGGAGGTCACCCATCC 61.379 68.421 0.00 0.00 0.00 3.51
101 102 0.914417 TTCCCAGGAGGTCACCCATC 60.914 60.000 0.00 0.00 36.75 3.51
102 103 0.916358 CTTCCCAGGAGGTCACCCAT 60.916 60.000 0.00 0.00 36.75 4.00
103 104 1.538876 CTTCCCAGGAGGTCACCCA 60.539 63.158 0.00 0.00 36.75 4.51
104 105 1.539124 ACTTCCCAGGAGGTCACCC 60.539 63.158 0.00 0.00 36.75 4.61
105 106 1.984020 GACTTCCCAGGAGGTCACC 59.016 63.158 20.66 0.00 46.32 4.02
108 109 1.324005 CGAGGACTTCCCAGGAGGTC 61.324 65.000 18.15 18.15 46.33 3.85
109 110 1.305381 CGAGGACTTCCCAGGAGGT 60.305 63.158 0.31 0.31 37.15 3.85
110 111 1.305381 ACGAGGACTTCCCAGGAGG 60.305 63.158 0.00 0.00 37.41 4.30
111 112 0.612174 TCACGAGGACTTCCCAGGAG 60.612 60.000 0.00 0.00 37.41 3.69
112 113 0.178944 TTCACGAGGACTTCCCAGGA 60.179 55.000 0.00 0.00 37.41 3.86
113 114 0.685097 TTTCACGAGGACTTCCCAGG 59.315 55.000 0.00 0.00 37.41 4.45
114 115 1.338200 CCTTTCACGAGGACTTCCCAG 60.338 57.143 0.00 0.00 39.25 4.45
115 116 0.685097 CCTTTCACGAGGACTTCCCA 59.315 55.000 0.00 0.00 39.25 4.37
116 117 0.036294 CCCTTTCACGAGGACTTCCC 60.036 60.000 0.00 0.00 39.25 3.97
117 118 0.685660 ACCCTTTCACGAGGACTTCC 59.314 55.000 0.00 0.00 39.25 3.46
118 119 2.545537 AACCCTTTCACGAGGACTTC 57.454 50.000 0.00 0.00 39.25 3.01
119 120 2.171870 TGAAACCCTTTCACGAGGACTT 59.828 45.455 0.00 0.00 44.21 3.01
120 121 1.766496 TGAAACCCTTTCACGAGGACT 59.234 47.619 0.00 0.00 44.21 3.85
121 122 2.249844 TGAAACCCTTTCACGAGGAC 57.750 50.000 0.00 0.00 44.21 3.85
129 130 6.231951 GGTAGGCTAGATATGAAACCCTTTC 58.768 44.000 0.00 0.00 40.08 2.62
130 131 5.073280 GGGTAGGCTAGATATGAAACCCTTT 59.927 44.000 8.73 0.00 41.75 3.11
131 132 4.597940 GGGTAGGCTAGATATGAAACCCTT 59.402 45.833 8.73 0.00 41.75 3.95
132 133 4.168883 GGGTAGGCTAGATATGAAACCCT 58.831 47.826 8.73 0.00 41.75 4.34
133 134 3.263681 GGGGTAGGCTAGATATGAAACCC 59.736 52.174 7.65 7.65 43.82 4.11
134 135 3.908103 TGGGGTAGGCTAGATATGAAACC 59.092 47.826 0.00 0.00 0.00 3.27
135 136 5.071923 AGTTGGGGTAGGCTAGATATGAAAC 59.928 44.000 0.00 0.00 0.00 2.78
136 137 5.224441 AGTTGGGGTAGGCTAGATATGAAA 58.776 41.667 0.00 0.00 0.00 2.69
137 138 4.827789 AGTTGGGGTAGGCTAGATATGAA 58.172 43.478 0.00 0.00 0.00 2.57
138 139 4.487282 AGTTGGGGTAGGCTAGATATGA 57.513 45.455 0.00 0.00 0.00 2.15
139 140 4.348168 ACAAGTTGGGGTAGGCTAGATATG 59.652 45.833 7.96 0.00 0.00 1.78
140 141 4.567857 ACAAGTTGGGGTAGGCTAGATAT 58.432 43.478 7.96 0.00 0.00 1.63
141 142 4.003584 ACAAGTTGGGGTAGGCTAGATA 57.996 45.455 7.96 0.00 0.00 1.98
142 143 2.846950 ACAAGTTGGGGTAGGCTAGAT 58.153 47.619 7.96 0.00 0.00 1.98
143 144 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
144 145 3.081804 CAAACAAGTTGGGGTAGGCTAG 58.918 50.000 7.96 0.00 33.18 3.42
145 146 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
146 147 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
159 160 4.027437 ACTAAGCCTTTTGTCCCAAACAA 58.973 39.130 0.00 0.00 46.11 2.83
160 161 3.637769 ACTAAGCCTTTTGTCCCAAACA 58.362 40.909 0.00 0.00 35.59 2.83
161 162 5.301045 ACTTACTAAGCCTTTTGTCCCAAAC 59.699 40.000 0.00 0.00 0.00 2.93
162 163 5.451354 ACTTACTAAGCCTTTTGTCCCAAA 58.549 37.500 0.00 0.00 0.00 3.28
163 164 5.056553 ACTTACTAAGCCTTTTGTCCCAA 57.943 39.130 0.00 0.00 0.00 4.12
164 165 4.717279 ACTTACTAAGCCTTTTGTCCCA 57.283 40.909 0.00 0.00 0.00 4.37
165 166 6.236409 ACTTACTTACTAAGCCTTTTGTCCC 58.764 40.000 0.00 0.00 36.04 4.46
166 167 8.837788 TTACTTACTTACTAAGCCTTTTGTCC 57.162 34.615 0.00 0.00 36.04 4.02
167 168 9.486497 ACTTACTTACTTACTAAGCCTTTTGTC 57.514 33.333 0.00 0.00 36.04 3.18
299 300 6.056428 ACGAAGCACGAACTAAAAAGATTT 57.944 33.333 10.05 0.00 45.77 2.17
439 440 7.078228 GTGATTAAGCTCGTTTTGAATGAACT 58.922 34.615 0.00 0.00 0.00 3.01
476 478 1.372501 AGCCACCCAGGTATGTCTTT 58.627 50.000 0.00 0.00 40.61 2.52
491 493 3.780294 TCCATTAGGAAGAGCTTAAGCCA 59.220 43.478 23.71 0.00 42.23 4.75
958 963 5.600669 AACTTTCCTTATCAAAGAGGGGT 57.399 39.130 0.00 0.00 35.24 4.95
1231 1237 6.210584 ACAAACCAATTACCAAATCCACCTAG 59.789 38.462 0.00 0.00 0.00 3.02
1259 1265 3.106827 TCAGGTGCACCTATCAGAATCA 58.893 45.455 37.27 7.01 46.65 2.57
1374 1380 2.772191 ACTGTCCACCCAGTGCCA 60.772 61.111 0.00 0.00 43.86 4.92
1512 1518 1.167851 CAGGTCCACGCATGTTGAAT 58.832 50.000 0.00 0.00 0.00 2.57
1775 1783 7.515957 TTTCTTGAAAAGGTCGATACGATAC 57.484 36.000 0.00 0.00 46.24 2.24
1801 1809 1.816961 GCCTAGATACCCGAAGACCGA 60.817 57.143 0.00 0.00 41.76 4.69
1900 1908 3.809832 GTGAAGTAGGCATGCGTATCAAT 59.190 43.478 21.86 9.53 0.00 2.57
1910 1918 1.450312 GCTGCGGTGAAGTAGGCAT 60.450 57.895 0.00 0.00 34.49 4.40
2033 2042 6.542821 TCCTATGGTGAACAAAAAGATGACT 58.457 36.000 0.00 0.00 0.00 3.41
2212 2223 4.511826 GGCCTAAAGTTTCAGGATATGTCG 59.488 45.833 12.59 0.00 33.42 4.35
2408 2419 3.386486 AGTGATTGCGACAACTACGAAA 58.614 40.909 0.00 0.00 32.75 3.46
2463 2474 0.257328 TGTTCAACAGCCCAAGGACA 59.743 50.000 0.00 0.00 0.00 4.02
2629 2640 7.276218 TCGTTAGAATTAGGTACACAAAATCCG 59.724 37.037 0.00 0.00 0.00 4.18
2668 2679 5.591099 GACTTTTGCCAACTGAATTTCTCA 58.409 37.500 0.00 0.00 0.00 3.27
2669 2680 4.676924 CGACTTTTGCCAACTGAATTTCTC 59.323 41.667 0.00 0.00 0.00 2.87
2670 2681 4.338118 TCGACTTTTGCCAACTGAATTTCT 59.662 37.500 0.00 0.00 0.00 2.52
2671 2682 4.606961 TCGACTTTTGCCAACTGAATTTC 58.393 39.130 0.00 0.00 0.00 2.17
2672 2683 4.647424 TCGACTTTTGCCAACTGAATTT 57.353 36.364 0.00 0.00 0.00 1.82
2673 2684 4.853924 ATCGACTTTTGCCAACTGAATT 57.146 36.364 0.00 0.00 0.00 2.17
2674 2685 4.142600 GCTATCGACTTTTGCCAACTGAAT 60.143 41.667 0.00 0.00 0.00 2.57
2675 2686 3.188460 GCTATCGACTTTTGCCAACTGAA 59.812 43.478 0.00 0.00 0.00 3.02
2676 2687 2.742053 GCTATCGACTTTTGCCAACTGA 59.258 45.455 0.00 0.00 0.00 3.41
2677 2688 2.474526 CGCTATCGACTTTTGCCAACTG 60.475 50.000 0.00 0.00 38.10 3.16
2678 2689 1.732259 CGCTATCGACTTTTGCCAACT 59.268 47.619 0.00 0.00 38.10 3.16
2679 2690 1.730064 TCGCTATCGACTTTTGCCAAC 59.270 47.619 0.00 0.00 40.21 3.77
2680 2691 1.999735 CTCGCTATCGACTTTTGCCAA 59.000 47.619 0.00 0.00 40.21 4.52
2681 2692 1.203758 TCTCGCTATCGACTTTTGCCA 59.796 47.619 0.00 0.00 40.21 4.92
2682 2693 1.588861 GTCTCGCTATCGACTTTTGCC 59.411 52.381 0.00 0.00 40.21 4.52
2683 2694 2.280183 CAGTCTCGCTATCGACTTTTGC 59.720 50.000 0.00 0.00 40.21 3.68
2684 2695 3.759418 TCAGTCTCGCTATCGACTTTTG 58.241 45.455 0.00 0.00 40.21 2.44
2685 2696 4.436242 TTCAGTCTCGCTATCGACTTTT 57.564 40.909 0.00 0.00 40.21 2.27
2686 2697 4.640789 ATTCAGTCTCGCTATCGACTTT 57.359 40.909 0.00 0.00 40.21 2.66
2687 2698 5.278071 CCTTATTCAGTCTCGCTATCGACTT 60.278 44.000 0.00 0.00 40.21 3.01
2688 2699 4.214545 CCTTATTCAGTCTCGCTATCGACT 59.785 45.833 0.00 0.00 40.21 4.18
2689 2700 4.468643 CCTTATTCAGTCTCGCTATCGAC 58.531 47.826 0.00 0.00 40.21 4.20
2690 2701 3.058155 GCCTTATTCAGTCTCGCTATCGA 60.058 47.826 0.00 0.00 43.28 3.59
2691 2702 3.057876 AGCCTTATTCAGTCTCGCTATCG 60.058 47.826 0.00 0.00 0.00 2.92
2692 2703 4.513198 AGCCTTATTCAGTCTCGCTATC 57.487 45.455 0.00 0.00 0.00 2.08
2693 2704 4.946478 AAGCCTTATTCAGTCTCGCTAT 57.054 40.909 0.00 0.00 0.00 2.97
2694 2705 4.643334 TGTAAGCCTTATTCAGTCTCGCTA 59.357 41.667 0.00 0.00 0.00 4.26
2695 2706 3.447586 TGTAAGCCTTATTCAGTCTCGCT 59.552 43.478 0.00 0.00 0.00 4.93
2696 2707 3.552294 GTGTAAGCCTTATTCAGTCTCGC 59.448 47.826 0.00 0.00 0.00 5.03
2697 2708 4.113354 GGTGTAAGCCTTATTCAGTCTCG 58.887 47.826 0.00 0.00 0.00 4.04
2698 2709 4.113354 CGGTGTAAGCCTTATTCAGTCTC 58.887 47.826 0.00 0.00 0.00 3.36
2699 2710 3.514309 ACGGTGTAAGCCTTATTCAGTCT 59.486 43.478 0.00 0.00 0.00 3.24
2700 2711 3.617263 CACGGTGTAAGCCTTATTCAGTC 59.383 47.826 0.00 0.00 0.00 3.51
2701 2712 3.007614 ACACGGTGTAAGCCTTATTCAGT 59.992 43.478 12.96 0.00 0.00 3.41
2702 2713 3.596214 ACACGGTGTAAGCCTTATTCAG 58.404 45.455 12.96 0.00 0.00 3.02
2703 2714 3.688694 ACACGGTGTAAGCCTTATTCA 57.311 42.857 12.96 0.00 0.00 2.57
2704 2715 7.958053 ATTATACACGGTGTAAGCCTTATTC 57.042 36.000 23.40 0.00 36.31 1.75
2705 2716 9.835389 TTTATTATACACGGTGTAAGCCTTATT 57.165 29.630 23.40 8.30 36.31 1.40
2706 2717 9.835389 TTTTATTATACACGGTGTAAGCCTTAT 57.165 29.630 23.40 9.92 36.31 1.73
2707 2718 9.097257 GTTTTATTATACACGGTGTAAGCCTTA 57.903 33.333 23.40 9.37 36.31 2.69
2708 2719 7.066163 GGTTTTATTATACACGGTGTAAGCCTT 59.934 37.037 23.40 10.32 36.31 4.35
2709 2720 6.539826 GGTTTTATTATACACGGTGTAAGCCT 59.460 38.462 23.40 10.67 36.31 4.58
2710 2721 6.539826 AGGTTTTATTATACACGGTGTAAGCC 59.460 38.462 23.40 17.97 36.31 4.35
2711 2722 7.543947 AGGTTTTATTATACACGGTGTAAGC 57.456 36.000 23.40 16.11 36.31 3.09
2715 2726 8.819974 CGAATAAGGTTTTATTATACACGGTGT 58.180 33.333 18.89 18.89 39.10 4.16
2716 2727 9.033481 TCGAATAAGGTTTTATTATACACGGTG 57.967 33.333 6.58 6.58 39.10 4.94
2717 2728 9.252962 CTCGAATAAGGTTTTATTATACACGGT 57.747 33.333 0.00 0.00 39.10 4.83
2718 2729 8.706035 CCTCGAATAAGGTTTTATTATACACGG 58.294 37.037 0.00 0.00 39.10 4.94
2719 2730 8.706035 CCCTCGAATAAGGTTTTATTATACACG 58.294 37.037 0.00 0.00 39.10 4.49
2720 2731 8.996271 CCCCTCGAATAAGGTTTTATTATACAC 58.004 37.037 0.00 0.00 39.10 2.90
2721 2732 8.158789 CCCCCTCGAATAAGGTTTTATTATACA 58.841 37.037 0.00 0.00 39.10 2.29
2722 2733 8.377799 TCCCCCTCGAATAAGGTTTTATTATAC 58.622 37.037 0.00 0.00 39.10 1.47
2723 2734 8.508969 TCCCCCTCGAATAAGGTTTTATTATA 57.491 34.615 0.00 0.00 39.10 0.98
2724 2735 7.396906 TCCCCCTCGAATAAGGTTTTATTAT 57.603 36.000 0.00 0.00 39.10 1.28
2725 2736 6.183361 CCTCCCCCTCGAATAAGGTTTTATTA 60.183 42.308 0.00 0.00 39.10 0.98
2726 2737 5.398695 CCTCCCCCTCGAATAAGGTTTTATT 60.399 44.000 0.00 0.00 41.12 1.40
2727 2738 4.104261 CCTCCCCCTCGAATAAGGTTTTAT 59.896 45.833 0.00 0.00 34.34 1.40
2728 2739 3.457012 CCTCCCCCTCGAATAAGGTTTTA 59.543 47.826 0.00 0.00 34.34 1.52
2729 2740 2.241430 CCTCCCCCTCGAATAAGGTTTT 59.759 50.000 0.00 0.00 34.34 2.43
2730 2741 1.844497 CCTCCCCCTCGAATAAGGTTT 59.156 52.381 0.00 0.00 34.34 3.27
2731 2742 1.508256 CCTCCCCCTCGAATAAGGTT 58.492 55.000 0.00 0.00 34.34 3.50
2732 2743 0.400093 CCCTCCCCCTCGAATAAGGT 60.400 60.000 0.00 0.00 34.34 3.50
2733 2744 0.400093 ACCCTCCCCCTCGAATAAGG 60.400 60.000 0.00 0.00 36.08 2.69
2734 2745 0.759346 CACCCTCCCCCTCGAATAAG 59.241 60.000 0.00 0.00 0.00 1.73
2735 2746 0.043637 ACACCCTCCCCCTCGAATAA 59.956 55.000 0.00 0.00 0.00 1.40
2736 2747 0.689745 CACACCCTCCCCCTCGAATA 60.690 60.000 0.00 0.00 0.00 1.75
2737 2748 1.995626 CACACCCTCCCCCTCGAAT 60.996 63.158 0.00 0.00 0.00 3.34
2738 2749 2.606519 CACACCCTCCCCCTCGAA 60.607 66.667 0.00 0.00 0.00 3.71
2739 2750 3.596799 TCACACCCTCCCCCTCGA 61.597 66.667 0.00 0.00 0.00 4.04
2740 2751 2.509931 TACTCACACCCTCCCCCTCG 62.510 65.000 0.00 0.00 0.00 4.63
2741 2752 0.688087 CTACTCACACCCTCCCCCTC 60.688 65.000 0.00 0.00 0.00 4.30
2742 2753 1.392534 CTACTCACACCCTCCCCCT 59.607 63.158 0.00 0.00 0.00 4.79
2743 2754 1.689582 CCTACTCACACCCTCCCCC 60.690 68.421 0.00 0.00 0.00 5.40
2744 2755 1.080538 ACCTACTCACACCCTCCCC 59.919 63.158 0.00 0.00 0.00 4.81
2745 2756 1.265454 CCACCTACTCACACCCTCCC 61.265 65.000 0.00 0.00 0.00 4.30
2746 2757 0.544595 ACCACCTACTCACACCCTCC 60.545 60.000 0.00 0.00 0.00 4.30
2747 2758 1.002087 CAACCACCTACTCACACCCTC 59.998 57.143 0.00 0.00 0.00 4.30
2748 2759 1.056660 CAACCACCTACTCACACCCT 58.943 55.000 0.00 0.00 0.00 4.34
2749 2760 0.036306 CCAACCACCTACTCACACCC 59.964 60.000 0.00 0.00 0.00 4.61
2750 2761 1.053424 TCCAACCACCTACTCACACC 58.947 55.000 0.00 0.00 0.00 4.16
2751 2762 3.418684 AATCCAACCACCTACTCACAC 57.581 47.619 0.00 0.00 0.00 3.82
2752 2763 4.020573 CAGTAATCCAACCACCTACTCACA 60.021 45.833 0.00 0.00 0.00 3.58
2753 2764 4.020485 ACAGTAATCCAACCACCTACTCAC 60.020 45.833 0.00 0.00 0.00 3.51
2754 2765 4.020573 CACAGTAATCCAACCACCTACTCA 60.021 45.833 0.00 0.00 0.00 3.41
2755 2766 4.222145 TCACAGTAATCCAACCACCTACTC 59.778 45.833 0.00 0.00 0.00 2.59
2756 2767 4.164981 TCACAGTAATCCAACCACCTACT 58.835 43.478 0.00 0.00 0.00 2.57
2757 2768 4.546829 TCACAGTAATCCAACCACCTAC 57.453 45.455 0.00 0.00 0.00 3.18
2758 2769 4.019681 CCTTCACAGTAATCCAACCACCTA 60.020 45.833 0.00 0.00 0.00 3.08
2759 2770 3.244911 CCTTCACAGTAATCCAACCACCT 60.245 47.826 0.00 0.00 0.00 4.00
2760 2771 3.081804 CCTTCACAGTAATCCAACCACC 58.918 50.000 0.00 0.00 0.00 4.61
2761 2772 3.751518 ACCTTCACAGTAATCCAACCAC 58.248 45.455 0.00 0.00 0.00 4.16
2762 2773 3.650942 AGACCTTCACAGTAATCCAACCA 59.349 43.478 0.00 0.00 0.00 3.67
2763 2774 4.020128 AGAGACCTTCACAGTAATCCAACC 60.020 45.833 0.00 0.00 0.00 3.77
2764 2775 5.153950 AGAGACCTTCACAGTAATCCAAC 57.846 43.478 0.00 0.00 0.00 3.77
2765 2776 6.667848 TCATAGAGACCTTCACAGTAATCCAA 59.332 38.462 0.00 0.00 0.00 3.53
2766 2777 6.194967 TCATAGAGACCTTCACAGTAATCCA 58.805 40.000 0.00 0.00 0.00 3.41
2767 2778 6.716934 TCATAGAGACCTTCACAGTAATCC 57.283 41.667 0.00 0.00 0.00 3.01
2768 2779 6.040391 AGCTCATAGAGACCTTCACAGTAATC 59.960 42.308 0.00 0.00 0.00 1.75
2769 2780 5.896678 AGCTCATAGAGACCTTCACAGTAAT 59.103 40.000 0.00 0.00 0.00 1.89
2770 2781 5.265191 AGCTCATAGAGACCTTCACAGTAA 58.735 41.667 0.00 0.00 0.00 2.24
2771 2782 4.861196 AGCTCATAGAGACCTTCACAGTA 58.139 43.478 0.00 0.00 0.00 2.74
2772 2783 3.707316 AGCTCATAGAGACCTTCACAGT 58.293 45.455 0.00 0.00 0.00 3.55
2773 2784 4.159321 TCAAGCTCATAGAGACCTTCACAG 59.841 45.833 0.00 0.00 0.00 3.66
2774 2785 4.089361 TCAAGCTCATAGAGACCTTCACA 58.911 43.478 0.00 0.00 0.00 3.58
2775 2786 4.441356 CCTCAAGCTCATAGAGACCTTCAC 60.441 50.000 0.00 0.00 0.00 3.18
2776 2787 3.703556 CCTCAAGCTCATAGAGACCTTCA 59.296 47.826 0.00 0.00 0.00 3.02
2777 2788 3.069443 CCCTCAAGCTCATAGAGACCTTC 59.931 52.174 0.00 0.00 0.00 3.46
2778 2789 3.037549 CCCTCAAGCTCATAGAGACCTT 58.962 50.000 0.00 0.00 0.00 3.50
2779 2790 2.676748 CCCTCAAGCTCATAGAGACCT 58.323 52.381 0.00 0.00 0.00 3.85
2780 2791 1.069978 GCCCTCAAGCTCATAGAGACC 59.930 57.143 0.00 0.00 0.00 3.85
2781 2792 1.759445 TGCCCTCAAGCTCATAGAGAC 59.241 52.381 0.00 1.35 0.00 3.36
2782 2793 2.037901 CTGCCCTCAAGCTCATAGAGA 58.962 52.381 0.00 0.00 0.00 3.10
2783 2794 1.761784 ACTGCCCTCAAGCTCATAGAG 59.238 52.381 0.00 0.00 0.00 2.43
2784 2795 1.483827 CACTGCCCTCAAGCTCATAGA 59.516 52.381 0.00 0.00 0.00 1.98
2785 2796 1.483827 TCACTGCCCTCAAGCTCATAG 59.516 52.381 0.00 0.00 0.00 2.23
2786 2797 1.571955 TCACTGCCCTCAAGCTCATA 58.428 50.000 0.00 0.00 0.00 2.15
2787 2798 0.694771 TTCACTGCCCTCAAGCTCAT 59.305 50.000 0.00 0.00 0.00 2.90
2788 2799 0.035881 CTTCACTGCCCTCAAGCTCA 59.964 55.000 0.00 0.00 0.00 4.26
2789 2800 0.322975 TCTTCACTGCCCTCAAGCTC 59.677 55.000 0.00 0.00 0.00 4.09
2790 2801 0.036022 GTCTTCACTGCCCTCAAGCT 59.964 55.000 0.00 0.00 0.00 3.74
2791 2802 0.036022 AGTCTTCACTGCCCTCAAGC 59.964 55.000 0.00 0.00 0.00 4.01
2792 2803 3.902881 ATAGTCTTCACTGCCCTCAAG 57.097 47.619 0.00 0.00 33.62 3.02
2793 2804 3.327757 ACAATAGTCTTCACTGCCCTCAA 59.672 43.478 0.00 0.00 33.62 3.02
2794 2805 2.906389 ACAATAGTCTTCACTGCCCTCA 59.094 45.455 0.00 0.00 33.62 3.86
2795 2806 3.526534 GACAATAGTCTTCACTGCCCTC 58.473 50.000 0.00 0.00 41.64 4.30
2796 2807 3.618690 GACAATAGTCTTCACTGCCCT 57.381 47.619 0.00 0.00 41.64 5.19
2807 2818 6.128634 CGTTTTTAGTGGTGGAGACAATAGTC 60.129 42.308 0.00 0.00 46.06 2.59
2808 2819 5.699458 CGTTTTTAGTGGTGGAGACAATAGT 59.301 40.000 0.00 0.00 46.06 2.12
2809 2820 5.699458 ACGTTTTTAGTGGTGGAGACAATAG 59.301 40.000 0.00 0.00 46.06 1.73
2810 2821 5.467399 CACGTTTTTAGTGGTGGAGACAATA 59.533 40.000 0.00 0.00 46.06 1.90
2811 2822 4.274950 CACGTTTTTAGTGGTGGAGACAAT 59.725 41.667 0.00 0.00 46.06 2.71
2812 2823 3.623960 CACGTTTTTAGTGGTGGAGACAA 59.376 43.478 0.00 0.00 46.06 3.18
2813 2824 3.199677 CACGTTTTTAGTGGTGGAGACA 58.800 45.455 0.00 0.00 36.06 3.41
2814 2825 3.200483 ACACGTTTTTAGTGGTGGAGAC 58.800 45.455 1.39 0.00 43.41 3.36
2815 2826 3.547054 ACACGTTTTTAGTGGTGGAGA 57.453 42.857 1.39 0.00 43.41 3.71
2816 2827 5.934935 ATTACACGTTTTTAGTGGTGGAG 57.065 39.130 1.39 0.00 43.41 3.86
2817 2828 6.523840 AGTATTACACGTTTTTAGTGGTGGA 58.476 36.000 1.39 0.00 43.41 4.02
2818 2829 6.400303 CGAGTATTACACGTTTTTAGTGGTGG 60.400 42.308 5.62 0.00 43.41 4.61
2819 2830 6.519315 CGAGTATTACACGTTTTTAGTGGTG 58.481 40.000 5.62 0.00 43.41 4.17
2820 2831 5.119125 GCGAGTATTACACGTTTTTAGTGGT 59.881 40.000 13.78 0.00 43.41 4.16
2821 2832 5.346822 AGCGAGTATTACACGTTTTTAGTGG 59.653 40.000 13.78 0.00 43.41 4.00
2822 2833 6.385537 AGCGAGTATTACACGTTTTTAGTG 57.614 37.500 13.78 0.00 44.57 2.74
2823 2834 8.519492 TTAAGCGAGTATTACACGTTTTTAGT 57.481 30.769 17.46 0.59 37.00 2.24
2824 2835 9.456797 CTTTAAGCGAGTATTACACGTTTTTAG 57.543 33.333 17.46 12.37 37.00 1.85
2825 2836 8.977505 ACTTTAAGCGAGTATTACACGTTTTTA 58.022 29.630 17.46 10.33 37.00 1.52
2826 2837 7.795272 CACTTTAAGCGAGTATTACACGTTTTT 59.205 33.333 17.46 11.06 37.00 1.94
2827 2838 7.169645 TCACTTTAAGCGAGTATTACACGTTTT 59.830 33.333 17.46 12.90 37.00 2.43
2828 2839 6.642131 TCACTTTAAGCGAGTATTACACGTTT 59.358 34.615 16.73 16.73 38.76 3.60
2829 2840 6.151691 TCACTTTAAGCGAGTATTACACGTT 58.848 36.000 13.78 6.39 34.71 3.99
2830 2841 5.702865 TCACTTTAAGCGAGTATTACACGT 58.297 37.500 13.78 0.00 34.71 4.49
2831 2842 6.807708 ATCACTTTAAGCGAGTATTACACG 57.192 37.500 8.98 8.98 35.33 4.49
2837 2848 9.601217 ACAGATTTTATCACTTTAAGCGAGTAT 57.399 29.630 0.00 0.00 0.00 2.12
2838 2849 8.997621 ACAGATTTTATCACTTTAAGCGAGTA 57.002 30.769 0.00 0.00 0.00 2.59
2839 2850 7.201444 CGACAGATTTTATCACTTTAAGCGAGT 60.201 37.037 0.00 0.00 0.00 4.18
2840 2851 7.009265 TCGACAGATTTTATCACTTTAAGCGAG 59.991 37.037 0.00 0.00 0.00 5.03
2841 2852 6.809689 TCGACAGATTTTATCACTTTAAGCGA 59.190 34.615 0.00 0.00 0.00 4.93
2842 2853 6.989437 TCGACAGATTTTATCACTTTAAGCG 58.011 36.000 0.00 0.00 0.00 4.68
2843 2854 7.277981 TCCTCGACAGATTTTATCACTTTAAGC 59.722 37.037 0.00 0.00 0.00 3.09
2844 2855 8.703604 TCCTCGACAGATTTTATCACTTTAAG 57.296 34.615 0.00 0.00 0.00 1.85
2845 2856 9.496873 TTTCCTCGACAGATTTTATCACTTTAA 57.503 29.630 0.00 0.00 0.00 1.52
2846 2857 8.932791 GTTTCCTCGACAGATTTTATCACTTTA 58.067 33.333 0.00 0.00 0.00 1.85
2847 2858 7.444183 TGTTTCCTCGACAGATTTTATCACTTT 59.556 33.333 0.00 0.00 0.00 2.66
2848 2859 6.934645 TGTTTCCTCGACAGATTTTATCACTT 59.065 34.615 0.00 0.00 0.00 3.16
2849 2860 6.464222 TGTTTCCTCGACAGATTTTATCACT 58.536 36.000 0.00 0.00 0.00 3.41
2850 2861 6.721571 TGTTTCCTCGACAGATTTTATCAC 57.278 37.500 0.00 0.00 0.00 3.06
2851 2862 9.098355 CTTATGTTTCCTCGACAGATTTTATCA 57.902 33.333 0.00 0.00 0.00 2.15
2852 2863 8.064814 GCTTATGTTTCCTCGACAGATTTTATC 58.935 37.037 0.00 0.00 0.00 1.75
2853 2864 7.552687 TGCTTATGTTTCCTCGACAGATTTTAT 59.447 33.333 0.00 0.00 0.00 1.40
2854 2865 6.876789 TGCTTATGTTTCCTCGACAGATTTTA 59.123 34.615 0.00 0.00 0.00 1.52
2855 2866 5.705441 TGCTTATGTTTCCTCGACAGATTTT 59.295 36.000 0.00 0.00 0.00 1.82
2856 2867 5.245531 TGCTTATGTTTCCTCGACAGATTT 58.754 37.500 0.00 0.00 0.00 2.17
2857 2868 4.832248 TGCTTATGTTTCCTCGACAGATT 58.168 39.130 0.00 0.00 0.00 2.40
2858 2869 4.081420 ACTGCTTATGTTTCCTCGACAGAT 60.081 41.667 0.00 0.00 0.00 2.90
2859 2870 3.258372 ACTGCTTATGTTTCCTCGACAGA 59.742 43.478 0.00 0.00 0.00 3.41
2860 2871 3.589988 ACTGCTTATGTTTCCTCGACAG 58.410 45.455 0.00 0.00 0.00 3.51
2861 2872 3.678056 ACTGCTTATGTTTCCTCGACA 57.322 42.857 0.00 0.00 0.00 4.35
2862 2873 4.959149 GAAACTGCTTATGTTTCCTCGAC 58.041 43.478 7.80 0.00 44.22 4.20
2869 2880 7.228507 TCACTACACATGAAACTGCTTATGTTT 59.771 33.333 0.00 0.00 39.92 2.83
2870 2881 6.710295 TCACTACACATGAAACTGCTTATGTT 59.290 34.615 0.00 0.00 31.84 2.71
2871 2882 6.230472 TCACTACACATGAAACTGCTTATGT 58.770 36.000 0.00 0.00 34.31 2.29
2872 2883 6.726258 TCACTACACATGAAACTGCTTATG 57.274 37.500 0.00 0.00 0.00 1.90
2873 2884 7.334090 AGATCACTACACATGAAACTGCTTAT 58.666 34.615 0.00 0.00 0.00 1.73
2874 2885 6.701340 AGATCACTACACATGAAACTGCTTA 58.299 36.000 0.00 0.00 0.00 3.09
2875 2886 5.555017 AGATCACTACACATGAAACTGCTT 58.445 37.500 0.00 0.00 0.00 3.91
2876 2887 5.046735 AGAGATCACTACACATGAAACTGCT 60.047 40.000 0.00 0.00 0.00 4.24
2877 2888 5.063186 CAGAGATCACTACACATGAAACTGC 59.937 44.000 0.00 0.00 0.00 4.40
2878 2889 6.162079 ACAGAGATCACTACACATGAAACTG 58.838 40.000 0.00 0.00 34.16 3.16
2879 2890 6.352016 ACAGAGATCACTACACATGAAACT 57.648 37.500 0.00 0.00 0.00 2.66
2880 2891 6.646653 TGAACAGAGATCACTACACATGAAAC 59.353 38.462 0.00 0.00 0.00 2.78
2881 2892 6.758254 TGAACAGAGATCACTACACATGAAA 58.242 36.000 0.00 0.00 0.00 2.69
2882 2893 6.345096 TGAACAGAGATCACTACACATGAA 57.655 37.500 0.00 0.00 0.00 2.57
2883 2894 5.982890 TGAACAGAGATCACTACACATGA 57.017 39.130 0.00 0.00 0.00 3.07
2884 2895 5.522824 CCATGAACAGAGATCACTACACATG 59.477 44.000 17.09 17.09 33.61 3.21
2885 2896 5.423290 TCCATGAACAGAGATCACTACACAT 59.577 40.000 0.00 0.00 0.00 3.21
2886 2897 4.772100 TCCATGAACAGAGATCACTACACA 59.228 41.667 0.00 0.00 0.00 3.72
2887 2898 5.126222 TCTCCATGAACAGAGATCACTACAC 59.874 44.000 0.00 0.00 34.23 2.90
2888 2899 5.264395 TCTCCATGAACAGAGATCACTACA 58.736 41.667 0.00 0.00 34.23 2.74
2889 2900 5.843673 TCTCCATGAACAGAGATCACTAC 57.156 43.478 0.00 0.00 34.23 2.73
2905 2916 1.420514 CAGTGGCCTCATGATCTCCAT 59.579 52.381 3.32 2.44 35.44 3.41
2906 2917 0.835276 CAGTGGCCTCATGATCTCCA 59.165 55.000 3.32 1.01 0.00 3.86
2907 2918 1.126488 TCAGTGGCCTCATGATCTCC 58.874 55.000 3.32 0.00 0.00 3.71
2908 2919 1.483827 TGTCAGTGGCCTCATGATCTC 59.516 52.381 3.32 0.00 0.00 2.75
2909 2920 1.209019 GTGTCAGTGGCCTCATGATCT 59.791 52.381 3.32 0.00 0.00 2.75
2910 2921 1.661341 GTGTCAGTGGCCTCATGATC 58.339 55.000 3.32 1.86 0.00 2.92
2911 2922 0.254178 GGTGTCAGTGGCCTCATGAT 59.746 55.000 3.32 0.00 0.00 2.45
2912 2923 1.679311 GGTGTCAGTGGCCTCATGA 59.321 57.895 3.32 2.24 0.00 3.07
2913 2924 1.377725 GGGTGTCAGTGGCCTCATG 60.378 63.158 3.32 0.00 0.00 3.07
2914 2925 1.136329 AAGGGTGTCAGTGGCCTCAT 61.136 55.000 3.32 0.00 0.00 2.90
2915 2926 0.472925 TAAGGGTGTCAGTGGCCTCA 60.473 55.000 3.32 0.00 0.00 3.86
2916 2927 0.912486 ATAAGGGTGTCAGTGGCCTC 59.088 55.000 3.32 0.00 0.00 4.70
2917 2928 0.620556 CATAAGGGTGTCAGTGGCCT 59.379 55.000 3.32 0.00 0.00 5.19
2918 2929 0.394352 CCATAAGGGTGTCAGTGGCC 60.394 60.000 0.00 0.00 0.00 5.36
2919 2930 3.175133 CCATAAGGGTGTCAGTGGC 57.825 57.895 0.00 0.00 0.00 5.01
2930 2941 4.141990 TCTATCCCACCTACCCATAAGG 57.858 50.000 0.00 0.00 43.78 2.69
2931 2942 5.403512 TCTTCTATCCCACCTACCCATAAG 58.596 45.833 0.00 0.00 0.00 1.73
2932 2943 5.102783 ACTCTTCTATCCCACCTACCCATAA 60.103 44.000 0.00 0.00 0.00 1.90
2933 2944 4.422592 ACTCTTCTATCCCACCTACCCATA 59.577 45.833 0.00 0.00 0.00 2.74
2934 2945 3.210074 ACTCTTCTATCCCACCTACCCAT 59.790 47.826 0.00 0.00 0.00 4.00
2935 2946 2.590611 ACTCTTCTATCCCACCTACCCA 59.409 50.000 0.00 0.00 0.00 4.51
2936 2947 2.966516 CACTCTTCTATCCCACCTACCC 59.033 54.545 0.00 0.00 0.00 3.69
2937 2948 2.966516 CCACTCTTCTATCCCACCTACC 59.033 54.545 0.00 0.00 0.00 3.18
2938 2949 2.966516 CCCACTCTTCTATCCCACCTAC 59.033 54.545 0.00 0.00 0.00 3.18
2939 2950 2.590611 ACCCACTCTTCTATCCCACCTA 59.409 50.000 0.00 0.00 0.00 3.08
2940 2951 1.366435 ACCCACTCTTCTATCCCACCT 59.634 52.381 0.00 0.00 0.00 4.00
2941 2952 1.880941 ACCCACTCTTCTATCCCACC 58.119 55.000 0.00 0.00 0.00 4.61
2942 2953 3.967987 ACATACCCACTCTTCTATCCCAC 59.032 47.826 0.00 0.00 0.00 4.61
2943 2954 3.967326 CACATACCCACTCTTCTATCCCA 59.033 47.826 0.00 0.00 0.00 4.37
2944 2955 3.325135 CCACATACCCACTCTTCTATCCC 59.675 52.174 0.00 0.00 0.00 3.85
2945 2956 3.325135 CCCACATACCCACTCTTCTATCC 59.675 52.174 0.00 0.00 0.00 2.59
2946 2957 3.244249 GCCCACATACCCACTCTTCTATC 60.244 52.174 0.00 0.00 0.00 2.08
2947 2958 2.706190 GCCCACATACCCACTCTTCTAT 59.294 50.000 0.00 0.00 0.00 1.98
2948 2959 2.116238 GCCCACATACCCACTCTTCTA 58.884 52.381 0.00 0.00 0.00 2.10
2949 2960 0.912486 GCCCACATACCCACTCTTCT 59.088 55.000 0.00 0.00 0.00 2.85
2950 2961 0.912486 AGCCCACATACCCACTCTTC 59.088 55.000 0.00 0.00 0.00 2.87
2951 2962 1.282157 GAAGCCCACATACCCACTCTT 59.718 52.381 0.00 0.00 0.00 2.85
2952 2963 0.912486 GAAGCCCACATACCCACTCT 59.088 55.000 0.00 0.00 0.00 3.24
2953 2964 0.912486 AGAAGCCCACATACCCACTC 59.088 55.000 0.00 0.00 0.00 3.51
2954 2965 2.263895 TAGAAGCCCACATACCCACT 57.736 50.000 0.00 0.00 0.00 4.00
2955 2966 2.438021 TGATAGAAGCCCACATACCCAC 59.562 50.000 0.00 0.00 0.00 4.61
2956 2967 2.770447 TGATAGAAGCCCACATACCCA 58.230 47.619 0.00 0.00 0.00 4.51
2957 2968 3.857157 TTGATAGAAGCCCACATACCC 57.143 47.619 0.00 0.00 0.00 3.69
2958 2969 5.437060 TCTTTTGATAGAAGCCCACATACC 58.563 41.667 0.00 0.00 0.00 2.73
2959 2970 7.173390 GGTATCTTTTGATAGAAGCCCACATAC 59.827 40.741 0.00 0.00 41.60 2.39
2960 2971 7.224297 GGTATCTTTTGATAGAAGCCCACATA 58.776 38.462 0.00 0.00 41.60 2.29
2961 2972 6.064717 GGTATCTTTTGATAGAAGCCCACAT 58.935 40.000 0.00 0.00 41.60 3.21
2962 2973 5.437060 GGTATCTTTTGATAGAAGCCCACA 58.563 41.667 0.00 0.00 41.60 4.17
2963 2974 4.511826 CGGTATCTTTTGATAGAAGCCCAC 59.488 45.833 0.00 0.00 41.60 4.61
2964 2975 4.703897 CGGTATCTTTTGATAGAAGCCCA 58.296 43.478 0.00 0.00 41.60 5.36
2965 2976 3.498777 GCGGTATCTTTTGATAGAAGCCC 59.501 47.826 0.00 0.00 41.60 5.19
2966 2977 4.381411 AGCGGTATCTTTTGATAGAAGCC 58.619 43.478 0.00 0.00 41.60 4.35
2967 2978 4.449405 GGAGCGGTATCTTTTGATAGAAGC 59.551 45.833 0.00 0.00 41.60 3.86
2968 2979 5.848406 AGGAGCGGTATCTTTTGATAGAAG 58.152 41.667 0.00 0.00 41.60 2.85
2969 2980 5.871396 AGGAGCGGTATCTTTTGATAGAA 57.129 39.130 0.00 0.00 41.60 2.10
2970 2981 6.127980 CGATAGGAGCGGTATCTTTTGATAGA 60.128 42.308 0.00 0.00 41.60 1.98
2971 2982 6.030849 CGATAGGAGCGGTATCTTTTGATAG 58.969 44.000 0.00 0.00 41.60 2.08
2972 2983 5.621555 GCGATAGGAGCGGTATCTTTTGATA 60.622 44.000 0.00 0.00 40.19 2.15
2973 2984 4.810790 CGATAGGAGCGGTATCTTTTGAT 58.189 43.478 0.00 0.00 42.66 2.57
2974 2985 3.552273 GCGATAGGAGCGGTATCTTTTGA 60.552 47.826 0.00 0.00 0.00 2.69
2975 2986 2.731976 GCGATAGGAGCGGTATCTTTTG 59.268 50.000 0.00 0.00 0.00 2.44
2976 2987 2.288886 GGCGATAGGAGCGGTATCTTTT 60.289 50.000 0.00 0.00 35.00 2.27
2977 2988 1.272769 GGCGATAGGAGCGGTATCTTT 59.727 52.381 0.00 0.00 35.00 2.52
2978 2989 0.889306 GGCGATAGGAGCGGTATCTT 59.111 55.000 0.00 0.00 35.00 2.40
2979 2990 0.251209 TGGCGATAGGAGCGGTATCT 60.251 55.000 0.00 0.00 35.00 1.98
2980 2991 0.171455 CTGGCGATAGGAGCGGTATC 59.829 60.000 0.00 0.00 35.00 2.24
2981 2992 0.539901 ACTGGCGATAGGAGCGGTAT 60.540 55.000 0.00 0.00 35.00 2.73
2982 2993 1.152819 ACTGGCGATAGGAGCGGTA 60.153 57.895 0.00 0.00 35.00 4.02
2983 2994 2.442272 ACTGGCGATAGGAGCGGT 60.442 61.111 0.00 0.00 35.00 5.68
2984 2995 2.028190 CACTGGCGATAGGAGCGG 59.972 66.667 0.00 0.00 35.00 5.52
2985 2996 2.028190 CCACTGGCGATAGGAGCG 59.972 66.667 0.00 0.00 35.00 5.03
2986 2997 2.280457 GCCACTGGCGATAGGAGC 60.280 66.667 3.73 0.00 39.62 4.70
3027 3038 2.265467 TTTAGCATCACTCGGCCCCC 62.265 60.000 0.00 0.00 0.00 5.40
3028 3039 0.393808 TTTTAGCATCACTCGGCCCC 60.394 55.000 0.00 0.00 0.00 5.80
3029 3040 0.733150 GTTTTAGCATCACTCGGCCC 59.267 55.000 0.00 0.00 0.00 5.80
3030 3041 1.398390 CAGTTTTAGCATCACTCGGCC 59.602 52.381 0.00 0.00 0.00 6.13
3031 3042 2.346803 TCAGTTTTAGCATCACTCGGC 58.653 47.619 0.00 0.00 0.00 5.54
3032 3043 3.243877 CGATCAGTTTTAGCATCACTCGG 59.756 47.826 0.00 0.00 0.00 4.63
3033 3044 3.243877 CCGATCAGTTTTAGCATCACTCG 59.756 47.826 0.00 0.00 0.00 4.18
3034 3045 4.785669 CCGATCAGTTTTAGCATCACTC 57.214 45.455 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.