Multiple sequence alignment - TraesCS3B01G066800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G066800 chr3B 100.000 2862 0 0 1 2862 39808878 39806017 0.000000e+00 5193
1 TraesCS3B01G066800 chr3B 86.192 449 46 7 2104 2550 40233582 40234016 3.340000e-129 472
2 TraesCS3B01G066800 chr3B 90.805 174 14 2 1871 2042 40232872 40233045 6.170000e-57 231
3 TraesCS3B01G066800 chr7B 99.216 1276 10 0 189 1464 662726614 662727889 0.000000e+00 2302
4 TraesCS3B01G066800 chr7B 98.413 378 6 0 1475 1852 662727567 662727944 0.000000e+00 665
5 TraesCS3B01G066800 chr6D 99.216 1276 10 0 189 1464 389245612 389244337 0.000000e+00 2302
6 TraesCS3B01G066800 chr6D 98.413 378 6 0 1475 1852 389244659 389244282 0.000000e+00 665
7 TraesCS3B01G066800 chr3D 99.138 1276 11 0 189 1464 589263316 589262041 0.000000e+00 2296
8 TraesCS3B01G066800 chr3D 89.617 732 50 17 2126 2839 22386053 22386776 0.000000e+00 907
9 TraesCS3B01G066800 chr3D 98.413 378 6 0 1475 1852 589262363 589261986 0.000000e+00 665
10 TraesCS3B01G066800 chr3D 84.497 587 60 19 2102 2682 22377232 22377793 4.170000e-153 551
11 TraesCS3B01G066800 chr3D 84.237 590 63 16 2102 2686 23055880 23056444 5.390000e-152 547
12 TraesCS3B01G066800 chr3A 99.138 1276 11 0 189 1464 66004923 66003648 0.000000e+00 2296
13 TraesCS3B01G066800 chr3A 88.136 826 75 18 1871 2686 32143878 32144690 0.000000e+00 961
14 TraesCS3B01G066800 chr3A 98.413 378 6 0 1475 1852 66003970 66003593 0.000000e+00 665
15 TraesCS3B01G066800 chr5D 98.981 1276 13 0 189 1464 503264566 503263291 0.000000e+00 2285
16 TraesCS3B01G066800 chr5D 98.903 1276 14 0 189 1464 503245482 503246757 0.000000e+00 2279
17 TraesCS3B01G066800 chr5D 98.413 378 6 0 1475 1852 503246435 503246812 0.000000e+00 665
18 TraesCS3B01G066800 chr5D 98.413 378 6 0 1475 1852 503263613 503263236 0.000000e+00 665
19 TraesCS3B01G066800 chr5D 97.688 173 4 0 1 173 432435384 432435556 5.990000e-77 298
20 TraesCS3B01G066800 chr5D 97.688 173 4 0 1 173 503245401 503245573 5.990000e-77 298
21 TraesCS3B01G066800 chr5D 97.688 173 4 0 1 173 503265176 503265004 5.990000e-77 298
22 TraesCS3B01G066800 chr2D 98.981 1276 13 0 189 1464 591984819 591986094 0.000000e+00 2285
23 TraesCS3B01G066800 chr2D 98.413 378 6 0 1475 1852 272811083 272810706 0.000000e+00 665
24 TraesCS3B01G066800 chr2D 97.688 173 4 0 1 173 272563763 272563935 5.990000e-77 298
25 TraesCS3B01G066800 chr2D 97.688 173 4 0 1 173 591984738 591984910 5.990000e-77 298
26 TraesCS3B01G066800 chr2A 98.981 1276 13 0 189 1464 726906245 726904970 0.000000e+00 2285
27 TraesCS3B01G066800 chr2A 98.677 378 5 0 1475 1852 726905292 726904915 0.000000e+00 671
28 TraesCS3B01G066800 chr1D 98.981 1276 13 0 189 1464 459904507 459903232 0.000000e+00 2285
29 TraesCS3B01G066800 chr1D 97.688 173 4 0 1 173 254525734 254525906 5.990000e-77 298
30 TraesCS3B01G066800 chr5B 98.824 1276 15 0 189 1464 127808643 127809918 0.000000e+00 2274
31 TraesCS3B01G066800 chr7D 98.677 378 5 0 1475 1852 77247414 77247791 0.000000e+00 671
32 TraesCS3B01G066800 chr7D 97.688 173 4 0 1 173 231562430 231562258 5.990000e-77 298
33 TraesCS3B01G066800 chrUn 97.688 173 4 0 1 173 470004553 470004725 5.990000e-77 298
34 TraesCS3B01G066800 chr1A 97.688 173 4 0 1 173 549269811 549269983 5.990000e-77 298


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G066800 chr3B 39806017 39808878 2861 True 5193.000000 5193 100.000000 1 2862 1 chr3B.!!$R1 2861
1 TraesCS3B01G066800 chr3B 40232872 40234016 1144 False 351.500000 472 88.498500 1871 2550 2 chr3B.!!$F1 679
2 TraesCS3B01G066800 chr7B 662726614 662727944 1330 False 1483.500000 2302 98.814500 189 1852 2 chr7B.!!$F1 1663
3 TraesCS3B01G066800 chr6D 389244282 389245612 1330 True 1483.500000 2302 98.814500 189 1852 2 chr6D.!!$R1 1663
4 TraesCS3B01G066800 chr3D 589261986 589263316 1330 True 1480.500000 2296 98.775500 189 1852 2 chr3D.!!$R1 1663
5 TraesCS3B01G066800 chr3D 22386053 22386776 723 False 907.000000 907 89.617000 2126 2839 1 chr3D.!!$F2 713
6 TraesCS3B01G066800 chr3D 22377232 22377793 561 False 551.000000 551 84.497000 2102 2682 1 chr3D.!!$F1 580
7 TraesCS3B01G066800 chr3D 23055880 23056444 564 False 547.000000 547 84.237000 2102 2686 1 chr3D.!!$F3 584
8 TraesCS3B01G066800 chr3A 66003593 66004923 1330 True 1480.500000 2296 98.775500 189 1852 2 chr3A.!!$R1 1663
9 TraesCS3B01G066800 chr3A 32143878 32144690 812 False 961.000000 961 88.136000 1871 2686 1 chr3A.!!$F1 815
10 TraesCS3B01G066800 chr5D 503263236 503265176 1940 True 1082.666667 2285 98.360667 1 1852 3 chr5D.!!$R1 1851
11 TraesCS3B01G066800 chr5D 503245401 503246812 1411 False 1080.666667 2279 98.334667 1 1852 3 chr5D.!!$F2 1851
12 TraesCS3B01G066800 chr2D 591984738 591986094 1356 False 1291.500000 2285 98.334500 1 1464 2 chr2D.!!$F2 1463
13 TraesCS3B01G066800 chr2A 726904915 726906245 1330 True 1478.000000 2285 98.829000 189 1852 2 chr2A.!!$R1 1663
14 TraesCS3B01G066800 chr1D 459903232 459904507 1275 True 2285.000000 2285 98.981000 189 1464 1 chr1D.!!$R1 1275
15 TraesCS3B01G066800 chr5B 127808643 127809918 1275 False 2274.000000 2274 98.824000 189 1464 1 chr5B.!!$F1 1275

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
129 130 0.037975 TTTACTTCACGGGCGAGGTC 60.038 55.0 0.0 0.0 0.00 3.85 F
1512 2375 0.035820 TTTACCCTGTGGCGGATGTC 60.036 55.0 0.0 0.0 33.59 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1521 2384 0.032815 GGCTGGAGATAAGCGGACTC 59.967 60.0 0.0 0.0 41.78 3.36 R
2496 3842 0.618458 ACAGCTAGAAAATGCCCCGA 59.382 50.0 0.0 0.0 0.00 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
81 82 7.654116 CCCGAAAAGGAGTCTATTAATTCTCTC 59.346 40.741 0.00 0.00 45.00 3.20
82 83 7.654116 CCGAAAAGGAGTCTATTAATTCTCTCC 59.346 40.741 17.32 17.32 45.00 3.71
83 84 8.198109 CGAAAAGGAGTCTATTAATTCTCTCCA 58.802 37.037 22.54 0.00 42.45 3.86
84 85 9.892130 GAAAAGGAGTCTATTAATTCTCTCCAA 57.108 33.333 22.54 0.00 42.45 3.53
88 89 9.844257 AGGAGTCTATTAATTCTCTCCAAATTG 57.156 33.333 22.54 0.00 42.45 2.32
89 90 9.061435 GGAGTCTATTAATTCTCTCCAAATTGG 57.939 37.037 18.86 5.48 40.51 3.16
90 91 9.620259 GAGTCTATTAATTCTCTCCAAATTGGT 57.380 33.333 12.28 0.00 39.03 3.67
91 92 9.981460 AGTCTATTAATTCTCTCCAAATTGGTT 57.019 29.630 12.28 0.27 39.03 3.67
103 104 2.687935 CAAATTGGTTGGATCGTAGGGG 59.312 50.000 0.00 0.00 33.18 4.79
104 105 1.591768 ATTGGTTGGATCGTAGGGGT 58.408 50.000 0.00 0.00 0.00 4.95
105 106 0.616371 TTGGTTGGATCGTAGGGGTG 59.384 55.000 0.00 0.00 0.00 4.61
106 107 0.252330 TGGTTGGATCGTAGGGGTGA 60.252 55.000 0.00 0.00 0.00 4.02
107 108 1.129058 GGTTGGATCGTAGGGGTGAT 58.871 55.000 0.00 0.00 0.00 3.06
108 109 1.202651 GGTTGGATCGTAGGGGTGATG 60.203 57.143 0.00 0.00 0.00 3.07
109 110 1.760613 GTTGGATCGTAGGGGTGATGA 59.239 52.381 0.00 0.00 0.00 2.92
110 111 2.368875 GTTGGATCGTAGGGGTGATGAT 59.631 50.000 0.00 0.00 0.00 2.45
111 112 2.689658 TGGATCGTAGGGGTGATGATT 58.310 47.619 0.00 0.00 0.00 2.57
112 113 3.045634 TGGATCGTAGGGGTGATGATTT 58.954 45.455 0.00 0.00 0.00 2.17
113 114 4.228010 TGGATCGTAGGGGTGATGATTTA 58.772 43.478 0.00 0.00 0.00 1.40
114 115 4.039973 TGGATCGTAGGGGTGATGATTTAC 59.960 45.833 0.00 0.00 0.00 2.01
115 116 4.283722 GGATCGTAGGGGTGATGATTTACT 59.716 45.833 0.00 0.00 0.00 2.24
116 117 5.221661 GGATCGTAGGGGTGATGATTTACTT 60.222 44.000 0.00 0.00 0.00 2.24
117 118 5.272283 TCGTAGGGGTGATGATTTACTTC 57.728 43.478 0.00 0.00 0.00 3.01
118 119 4.712829 TCGTAGGGGTGATGATTTACTTCA 59.287 41.667 0.00 0.00 0.00 3.02
119 120 4.809426 CGTAGGGGTGATGATTTACTTCAC 59.191 45.833 0.00 0.00 46.28 3.18
123 124 3.675467 GTGATGATTTACTTCACGGGC 57.325 47.619 0.00 0.00 41.42 6.13
124 125 2.030457 GTGATGATTTACTTCACGGGCG 59.970 50.000 0.00 0.00 41.42 6.13
125 126 2.093921 TGATGATTTACTTCACGGGCGA 60.094 45.455 0.00 0.00 0.00 5.54
126 127 2.004583 TGATTTACTTCACGGGCGAG 57.995 50.000 0.00 0.00 0.00 5.03
127 128 1.287425 GATTTACTTCACGGGCGAGG 58.713 55.000 0.00 0.00 0.00 4.63
128 129 0.611714 ATTTACTTCACGGGCGAGGT 59.388 50.000 0.00 0.00 0.00 3.85
129 130 0.037975 TTTACTTCACGGGCGAGGTC 60.038 55.000 0.00 0.00 0.00 3.85
130 131 0.896940 TTACTTCACGGGCGAGGTCT 60.897 55.000 0.00 0.00 0.00 3.85
131 132 1.310933 TACTTCACGGGCGAGGTCTC 61.311 60.000 0.00 0.00 0.00 3.36
132 133 2.282958 TTCACGGGCGAGGTCTCT 60.283 61.111 0.00 0.00 0.00 3.10
133 134 2.549611 CTTCACGGGCGAGGTCTCTG 62.550 65.000 0.00 0.00 0.00 3.35
134 135 4.135153 CACGGGCGAGGTCTCTGG 62.135 72.222 0.00 0.00 0.00 3.86
135 136 4.680537 ACGGGCGAGGTCTCTGGT 62.681 66.667 0.00 0.00 0.00 4.00
136 137 3.382832 CGGGCGAGGTCTCTGGTT 61.383 66.667 0.00 0.00 0.00 3.67
137 138 2.579738 GGGCGAGGTCTCTGGTTC 59.420 66.667 0.00 0.00 0.00 3.62
138 139 2.283529 GGGCGAGGTCTCTGGTTCA 61.284 63.158 0.00 0.00 0.00 3.18
139 140 1.671742 GGCGAGGTCTCTGGTTCAA 59.328 57.895 0.00 0.00 0.00 2.69
140 141 0.390472 GGCGAGGTCTCTGGTTCAAG 60.390 60.000 0.00 0.00 0.00 3.02
141 142 0.318762 GCGAGGTCTCTGGTTCAAGT 59.681 55.000 0.00 0.00 0.00 3.16
142 143 1.670380 GCGAGGTCTCTGGTTCAAGTC 60.670 57.143 0.00 0.00 0.00 3.01
143 144 1.067495 CGAGGTCTCTGGTTCAAGTCC 60.067 57.143 0.00 0.00 0.00 3.85
144 145 1.971357 GAGGTCTCTGGTTCAAGTCCA 59.029 52.381 0.00 0.00 0.00 4.02
170 171 2.985282 CAGCTGCGCCAGGGAAAA 60.985 61.111 4.18 0.00 31.21 2.29
171 172 2.674380 AGCTGCGCCAGGGAAAAG 60.674 61.111 4.18 0.00 31.21 2.27
172 173 2.672996 GCTGCGCCAGGGAAAAGA 60.673 61.111 4.18 0.00 31.21 2.52
479 1009 1.420138 TGGGGAAGAGGACTGAAACAC 59.580 52.381 0.00 0.00 0.00 3.32
747 1277 1.553690 CGACCCCATTGTCTCCACCT 61.554 60.000 0.00 0.00 32.97 4.00
779 1309 1.899437 GAGATCACCCCAAGGACGCA 61.899 60.000 0.00 0.00 36.73 5.24
902 1432 5.335661 GGCAATCACTCGTTCTTAAAACCAT 60.336 40.000 0.00 0.00 0.00 3.55
1463 2326 6.708054 AGTTGAAAATAAGCATAGATCCGGAG 59.292 38.462 11.34 0.00 0.00 4.63
1495 2358 2.750350 CCTGAGAGGCGGTGGTTT 59.250 61.111 0.00 0.00 0.00 3.27
1496 2359 1.980052 CCTGAGAGGCGGTGGTTTA 59.020 57.895 0.00 0.00 0.00 2.01
1497 2360 0.391263 CCTGAGAGGCGGTGGTTTAC 60.391 60.000 0.00 0.00 0.00 2.01
1498 2361 0.391263 CTGAGAGGCGGTGGTTTACC 60.391 60.000 0.00 0.00 46.56 2.85
1505 2368 4.090723 GGTGGTTTACCCTGTGGC 57.909 61.111 0.00 0.00 44.15 5.01
1506 2369 1.969589 GGTGGTTTACCCTGTGGCG 60.970 63.158 0.00 0.00 44.15 5.69
1507 2370 1.969589 GTGGTTTACCCTGTGGCGG 60.970 63.158 0.00 0.00 33.59 6.13
1508 2371 2.148052 TGGTTTACCCTGTGGCGGA 61.148 57.895 0.00 0.00 33.59 5.54
1509 2372 1.301954 GGTTTACCCTGTGGCGGAT 59.698 57.895 0.00 0.00 33.59 4.18
1510 2373 1.029947 GGTTTACCCTGTGGCGGATG 61.030 60.000 0.00 0.00 33.59 3.51
1511 2374 0.322187 GTTTACCCTGTGGCGGATGT 60.322 55.000 0.00 0.00 33.59 3.06
1512 2375 0.035820 TTTACCCTGTGGCGGATGTC 60.036 55.000 0.00 0.00 33.59 3.06
1513 2376 1.195442 TTACCCTGTGGCGGATGTCA 61.195 55.000 0.00 0.00 33.59 3.58
1514 2377 1.613317 TACCCTGTGGCGGATGTCAG 61.613 60.000 0.00 0.00 33.59 3.51
1515 2378 2.821366 CCTGTGGCGGATGTCAGC 60.821 66.667 0.00 0.00 36.32 4.26
1516 2379 3.190849 CTGTGGCGGATGTCAGCG 61.191 66.667 0.00 0.00 37.94 5.18
1517 2380 4.758251 TGTGGCGGATGTCAGCGG 62.758 66.667 0.00 0.00 37.94 5.52
1518 2381 4.760047 GTGGCGGATGTCAGCGGT 62.760 66.667 0.00 0.00 37.94 5.68
1519 2382 4.015406 TGGCGGATGTCAGCGGTT 62.015 61.111 0.00 0.00 37.94 4.44
1520 2383 3.195698 GGCGGATGTCAGCGGTTC 61.196 66.667 0.00 0.00 37.94 3.62
1521 2384 3.554692 GCGGATGTCAGCGGTTCG 61.555 66.667 0.00 0.00 0.00 3.95
1522 2385 2.180769 CGGATGTCAGCGGTTCGA 59.819 61.111 0.00 0.00 0.00 3.71
1523 2386 1.874019 CGGATGTCAGCGGTTCGAG 60.874 63.158 0.00 0.00 0.00 4.04
1524 2387 1.215647 GGATGTCAGCGGTTCGAGT 59.784 57.895 0.00 0.00 0.00 4.18
1525 2388 0.802607 GGATGTCAGCGGTTCGAGTC 60.803 60.000 0.00 0.00 0.00 3.36
1526 2389 0.802607 GATGTCAGCGGTTCGAGTCC 60.803 60.000 0.00 0.00 0.00 3.85
1533 2396 2.869354 CGGTTCGAGTCCGCTTATC 58.131 57.895 15.84 0.00 41.48 1.75
1534 2397 0.381089 CGGTTCGAGTCCGCTTATCT 59.619 55.000 15.84 0.00 41.48 1.98
1535 2398 1.597445 CGGTTCGAGTCCGCTTATCTC 60.597 57.143 15.84 0.00 41.48 2.75
1536 2399 1.269154 GGTTCGAGTCCGCTTATCTCC 60.269 57.143 0.00 0.00 35.37 3.71
1537 2400 1.404391 GTTCGAGTCCGCTTATCTCCA 59.596 52.381 0.00 0.00 35.37 3.86
1538 2401 1.309950 TCGAGTCCGCTTATCTCCAG 58.690 55.000 0.00 0.00 35.37 3.86
1539 2402 0.318275 CGAGTCCGCTTATCTCCAGC 60.318 60.000 0.00 0.00 0.00 4.85
1540 2403 0.032815 GAGTCCGCTTATCTCCAGCC 59.967 60.000 0.00 0.00 33.29 4.85
1541 2404 1.069935 GTCCGCTTATCTCCAGCCC 59.930 63.158 0.00 0.00 33.29 5.19
1542 2405 2.029666 CCGCTTATCTCCAGCCCG 59.970 66.667 0.00 0.00 33.29 6.13
1543 2406 2.797278 CCGCTTATCTCCAGCCCGT 61.797 63.158 0.00 0.00 33.29 5.28
1544 2407 1.592669 CGCTTATCTCCAGCCCGTG 60.593 63.158 0.00 0.00 33.29 4.94
1545 2408 1.823295 GCTTATCTCCAGCCCGTGA 59.177 57.895 0.00 0.00 0.00 4.35
1546 2409 0.178068 GCTTATCTCCAGCCCGTGAA 59.822 55.000 0.00 0.00 0.00 3.18
1547 2410 1.941325 CTTATCTCCAGCCCGTGAAC 58.059 55.000 0.00 0.00 0.00 3.18
1548 2411 1.482593 CTTATCTCCAGCCCGTGAACT 59.517 52.381 0.00 0.00 0.00 3.01
1549 2412 1.568504 TATCTCCAGCCCGTGAACTT 58.431 50.000 0.00 0.00 0.00 2.66
1550 2413 1.568504 ATCTCCAGCCCGTGAACTTA 58.431 50.000 0.00 0.00 0.00 2.24
1551 2414 0.895530 TCTCCAGCCCGTGAACTTAG 59.104 55.000 0.00 0.00 0.00 2.18
1552 2415 0.741221 CTCCAGCCCGTGAACTTAGC 60.741 60.000 0.00 0.00 0.00 3.09
1553 2416 2.100631 CCAGCCCGTGAACTTAGCG 61.101 63.158 0.00 0.00 0.00 4.26
1554 2417 2.100631 CAGCCCGTGAACTTAGCGG 61.101 63.158 0.00 0.00 44.55 5.52
1566 2429 8.823584 CGTGAACTTAGCGGATACTATTATAG 57.176 38.462 0.00 0.00 0.00 1.31
1567 2430 7.428761 CGTGAACTTAGCGGATACTATTATAGC 59.571 40.741 0.00 0.00 0.00 2.97
1568 2431 7.428761 GTGAACTTAGCGGATACTATTATAGCG 59.571 40.741 0.00 0.00 30.61 4.26
1569 2432 7.335171 TGAACTTAGCGGATACTATTATAGCGA 59.665 37.037 0.00 0.00 30.61 4.93
1570 2433 7.804843 ACTTAGCGGATACTATTATAGCGAT 57.195 36.000 0.00 0.00 30.61 4.58
1571 2434 8.899427 ACTTAGCGGATACTATTATAGCGATA 57.101 34.615 0.00 0.00 30.61 2.92
1572 2435 8.991026 ACTTAGCGGATACTATTATAGCGATAG 58.009 37.037 0.00 0.00 34.11 2.08
1586 2449 2.105323 CGATAGCACCGAATTTTGCC 57.895 50.000 4.51 0.00 39.75 4.52
1587 2450 1.400142 CGATAGCACCGAATTTTGCCA 59.600 47.619 4.51 0.00 39.75 4.92
1588 2451 2.159448 CGATAGCACCGAATTTTGCCAA 60.159 45.455 4.51 0.00 39.75 4.52
1589 2452 3.489059 CGATAGCACCGAATTTTGCCAAT 60.489 43.478 4.51 0.45 39.75 3.16
1590 2453 2.837532 AGCACCGAATTTTGCCAATT 57.162 40.000 4.51 0.00 39.75 2.32
1591 2454 2.687370 AGCACCGAATTTTGCCAATTC 58.313 42.857 7.95 7.95 39.75 2.17
1592 2455 2.036992 AGCACCGAATTTTGCCAATTCA 59.963 40.909 15.26 0.00 39.75 2.57
1593 2456 2.412770 GCACCGAATTTTGCCAATTCAG 59.587 45.455 15.26 8.81 36.66 3.02
1594 2457 2.412770 CACCGAATTTTGCCAATTCAGC 59.587 45.455 15.26 0.00 36.66 4.26
1595 2458 2.036992 ACCGAATTTTGCCAATTCAGCA 59.963 40.909 15.26 0.00 36.66 4.41
1596 2459 2.669434 CCGAATTTTGCCAATTCAGCAG 59.331 45.455 15.26 3.20 42.17 4.24
1597 2460 3.319755 CGAATTTTGCCAATTCAGCAGT 58.680 40.909 15.26 0.00 42.17 4.40
1598 2461 3.742369 CGAATTTTGCCAATTCAGCAGTT 59.258 39.130 15.26 0.00 42.17 3.16
1599 2462 4.143263 CGAATTTTGCCAATTCAGCAGTTC 60.143 41.667 15.26 6.03 42.17 3.01
1600 2463 2.420628 TTTGCCAATTCAGCAGTTCG 57.579 45.000 0.35 0.00 42.17 3.95
1601 2464 1.603456 TTGCCAATTCAGCAGTTCGA 58.397 45.000 0.35 0.00 42.17 3.71
1602 2465 1.825090 TGCCAATTCAGCAGTTCGAT 58.175 45.000 0.00 0.00 34.69 3.59
1603 2466 1.739466 TGCCAATTCAGCAGTTCGATC 59.261 47.619 0.00 0.00 34.69 3.69
1604 2467 2.012673 GCCAATTCAGCAGTTCGATCT 58.987 47.619 0.00 0.00 0.00 2.75
1605 2468 3.198068 GCCAATTCAGCAGTTCGATCTA 58.802 45.455 0.00 0.00 0.00 1.98
1606 2469 3.812053 GCCAATTCAGCAGTTCGATCTAT 59.188 43.478 0.00 0.00 0.00 1.98
1607 2470 4.319333 GCCAATTCAGCAGTTCGATCTATG 60.319 45.833 0.00 0.00 0.00 2.23
1608 2471 5.052481 CCAATTCAGCAGTTCGATCTATGA 58.948 41.667 0.00 1.60 0.00 2.15
1609 2472 5.699915 CCAATTCAGCAGTTCGATCTATGAT 59.300 40.000 9.97 0.00 0.00 2.45
1610 2473 6.204301 CCAATTCAGCAGTTCGATCTATGATT 59.796 38.462 9.97 5.83 0.00 2.57
1611 2474 7.255035 CCAATTCAGCAGTTCGATCTATGATTT 60.255 37.037 9.97 9.87 0.00 2.17
1612 2475 6.834959 TTCAGCAGTTCGATCTATGATTTC 57.165 37.500 9.97 0.00 0.00 2.17
1613 2476 5.906073 TCAGCAGTTCGATCTATGATTTCA 58.094 37.500 0.00 0.00 0.00 2.69
1614 2477 5.750547 TCAGCAGTTCGATCTATGATTTCAC 59.249 40.000 0.00 0.00 0.00 3.18
1615 2478 5.521372 CAGCAGTTCGATCTATGATTTCACA 59.479 40.000 0.00 0.00 0.00 3.58
1616 2479 6.202379 CAGCAGTTCGATCTATGATTTCACAT 59.798 38.462 0.00 0.00 0.00 3.21
1617 2480 6.765036 AGCAGTTCGATCTATGATTTCACATT 59.235 34.615 0.00 0.00 0.00 2.71
1618 2481 7.042187 AGCAGTTCGATCTATGATTTCACATTC 60.042 37.037 0.00 0.00 0.00 2.67
1619 2482 7.254556 GCAGTTCGATCTATGATTTCACATTCA 60.255 37.037 0.00 0.00 0.00 2.57
1620 2483 8.771766 CAGTTCGATCTATGATTTCACATTCAT 58.228 33.333 0.00 0.00 36.57 2.57
1621 2484 8.771766 AGTTCGATCTATGATTTCACATTCATG 58.228 33.333 0.00 0.00 34.52 3.07
1622 2485 7.662604 TCGATCTATGATTTCACATTCATGG 57.337 36.000 0.00 0.00 34.52 3.66
1623 2486 7.444299 TCGATCTATGATTTCACATTCATGGA 58.556 34.615 0.00 2.18 41.93 3.41
1624 2487 7.386025 TCGATCTATGATTTCACATTCATGGAC 59.614 37.037 1.78 0.00 40.97 4.02
1625 2488 6.849588 TCTATGATTTCACATTCATGGACG 57.150 37.500 0.00 0.00 35.65 4.79
1626 2489 6.348498 TCTATGATTTCACATTCATGGACGT 58.652 36.000 0.00 0.00 35.65 4.34
1627 2490 5.902613 ATGATTTCACATTCATGGACGTT 57.097 34.783 0.00 0.00 31.51 3.99
1628 2491 5.045668 TGATTTCACATTCATGGACGTTG 57.954 39.130 0.00 0.00 0.00 4.10
1629 2492 4.759183 TGATTTCACATTCATGGACGTTGA 59.241 37.500 0.00 0.00 0.00 3.18
1630 2493 5.415389 TGATTTCACATTCATGGACGTTGAT 59.585 36.000 0.00 0.00 0.00 2.57
1631 2494 6.597280 TGATTTCACATTCATGGACGTTGATA 59.403 34.615 0.00 0.00 0.00 2.15
1632 2495 6.809630 TTTCACATTCATGGACGTTGATAA 57.190 33.333 0.00 0.00 0.00 1.75
1633 2496 6.421377 TTCACATTCATGGACGTTGATAAG 57.579 37.500 0.00 0.00 0.00 1.73
1634 2497 5.729510 TCACATTCATGGACGTTGATAAGA 58.270 37.500 0.00 0.00 0.00 2.10
1635 2498 6.348498 TCACATTCATGGACGTTGATAAGAT 58.652 36.000 0.00 0.00 0.00 2.40
1636 2499 6.479990 TCACATTCATGGACGTTGATAAGATC 59.520 38.462 0.00 0.00 0.00 2.75
1637 2500 5.760253 ACATTCATGGACGTTGATAAGATCC 59.240 40.000 0.00 0.00 0.00 3.36
1638 2501 5.614324 TTCATGGACGTTGATAAGATCCT 57.386 39.130 0.00 0.00 0.00 3.24
1639 2502 5.614324 TCATGGACGTTGATAAGATCCTT 57.386 39.130 0.00 0.00 0.00 3.36
1640 2503 5.601662 TCATGGACGTTGATAAGATCCTTC 58.398 41.667 0.00 0.00 0.00 3.46
1641 2504 4.402056 TGGACGTTGATAAGATCCTTCC 57.598 45.455 0.00 0.00 0.00 3.46
1642 2505 3.772572 TGGACGTTGATAAGATCCTTCCA 59.227 43.478 0.00 0.00 0.00 3.53
1643 2506 4.408921 TGGACGTTGATAAGATCCTTCCAT 59.591 41.667 0.00 0.00 0.00 3.41
1644 2507 5.104527 TGGACGTTGATAAGATCCTTCCATT 60.105 40.000 0.00 0.00 0.00 3.16
1645 2508 5.823045 GGACGTTGATAAGATCCTTCCATTT 59.177 40.000 0.00 0.00 0.00 2.32
1646 2509 6.990349 GGACGTTGATAAGATCCTTCCATTTA 59.010 38.462 0.00 0.00 0.00 1.40
1647 2510 7.171678 GGACGTTGATAAGATCCTTCCATTTAG 59.828 40.741 0.00 0.00 0.00 1.85
1648 2511 7.565680 ACGTTGATAAGATCCTTCCATTTAGT 58.434 34.615 0.00 0.00 0.00 2.24
1649 2512 8.701895 ACGTTGATAAGATCCTTCCATTTAGTA 58.298 33.333 0.00 0.00 0.00 1.82
1650 2513 9.197694 CGTTGATAAGATCCTTCCATTTAGTAG 57.802 37.037 0.00 0.00 0.00 2.57
1651 2514 8.994170 GTTGATAAGATCCTTCCATTTAGTAGC 58.006 37.037 0.00 0.00 0.00 3.58
1652 2515 8.262601 TGATAAGATCCTTCCATTTAGTAGCA 57.737 34.615 0.00 0.00 0.00 3.49
1653 2516 8.150945 TGATAAGATCCTTCCATTTAGTAGCAC 58.849 37.037 0.00 0.00 0.00 4.40
1654 2517 5.297569 AGATCCTTCCATTTAGTAGCACC 57.702 43.478 0.00 0.00 0.00 5.01
1655 2518 4.971924 AGATCCTTCCATTTAGTAGCACCT 59.028 41.667 0.00 0.00 0.00 4.00
1656 2519 5.430089 AGATCCTTCCATTTAGTAGCACCTT 59.570 40.000 0.00 0.00 0.00 3.50
1657 2520 6.615726 AGATCCTTCCATTTAGTAGCACCTTA 59.384 38.462 0.00 0.00 0.00 2.69
1658 2521 6.235231 TCCTTCCATTTAGTAGCACCTTAG 57.765 41.667 0.00 0.00 0.00 2.18
1659 2522 5.130477 TCCTTCCATTTAGTAGCACCTTAGG 59.870 44.000 0.00 0.00 0.00 2.69
1660 2523 5.130477 CCTTCCATTTAGTAGCACCTTAGGA 59.870 44.000 4.77 0.00 0.00 2.94
1661 2524 6.183361 CCTTCCATTTAGTAGCACCTTAGGAT 60.183 42.308 4.77 0.00 0.00 3.24
1662 2525 6.174720 TCCATTTAGTAGCACCTTAGGATG 57.825 41.667 4.77 0.58 0.00 3.51
1663 2526 5.071788 TCCATTTAGTAGCACCTTAGGATGG 59.928 44.000 4.77 4.36 33.38 3.51
1664 2527 4.417426 TTTAGTAGCACCTTAGGATGGC 57.583 45.455 4.77 5.73 0.00 4.40
1665 2528 1.879575 AGTAGCACCTTAGGATGGCA 58.120 50.000 4.77 0.00 0.00 4.92
1666 2529 2.412591 AGTAGCACCTTAGGATGGCAT 58.587 47.619 4.77 0.00 0.00 4.40
1667 2530 3.587498 AGTAGCACCTTAGGATGGCATA 58.413 45.455 4.77 0.00 0.00 3.14
1668 2531 3.580458 AGTAGCACCTTAGGATGGCATAG 59.420 47.826 4.77 0.00 0.00 2.23
1669 2532 1.072965 AGCACCTTAGGATGGCATAGC 59.927 52.381 4.77 0.00 0.00 2.97
1672 2535 2.107204 CACCTTAGGATGGCATAGCCTT 59.893 50.000 12.47 2.59 44.62 4.35
1673 2536 3.327757 CACCTTAGGATGGCATAGCCTTA 59.672 47.826 12.47 3.76 44.62 2.69
1674 2537 3.980698 ACCTTAGGATGGCATAGCCTTAA 59.019 43.478 12.47 1.81 44.62 1.85
1675 2538 4.202472 ACCTTAGGATGGCATAGCCTTAAC 60.202 45.833 12.47 0.50 44.62 2.01
1676 2539 2.550830 AGGATGGCATAGCCTTAACG 57.449 50.000 9.71 0.00 44.62 3.18
1677 2540 1.768870 AGGATGGCATAGCCTTAACGT 59.231 47.619 9.71 0.00 44.62 3.99
1678 2541 2.172717 AGGATGGCATAGCCTTAACGTT 59.827 45.455 5.88 5.88 44.62 3.99
1679 2542 3.389983 AGGATGGCATAGCCTTAACGTTA 59.610 43.478 3.29 3.29 44.62 3.18
1680 2543 4.141574 AGGATGGCATAGCCTTAACGTTAA 60.142 41.667 19.12 19.12 44.62 2.01
1681 2544 5.456186 AGGATGGCATAGCCTTAACGTTAAT 60.456 40.000 20.39 9.27 44.62 1.40
1682 2545 7.462844 AGGATGGCATAGCCTTAACGTTAATG 61.463 42.308 20.39 18.13 44.62 1.90
1683 2546 4.483476 GGCATAGCCTTAACGTTAATGG 57.517 45.455 20.39 21.43 46.69 3.16
1684 2547 3.304458 GGCATAGCCTTAACGTTAATGGC 60.304 47.826 32.21 32.21 46.69 4.40
1685 2548 3.606153 GCATAGCCTTAACGTTAATGGCG 60.606 47.826 32.31 25.53 39.62 5.69
1686 2549 2.389962 AGCCTTAACGTTAATGGCGA 57.610 45.000 32.31 12.85 39.62 5.54
1687 2550 2.277084 AGCCTTAACGTTAATGGCGAG 58.723 47.619 32.31 19.06 39.62 5.03
1688 2551 1.329599 GCCTTAACGTTAATGGCGAGG 59.670 52.381 29.07 22.76 31.93 4.63
1689 2552 2.624636 CCTTAACGTTAATGGCGAGGT 58.375 47.619 20.39 0.00 0.00 3.85
1690 2553 3.004862 CCTTAACGTTAATGGCGAGGTT 58.995 45.455 20.39 0.00 0.00 3.50
1691 2554 3.063045 CCTTAACGTTAATGGCGAGGTTC 59.937 47.826 20.39 0.00 0.00 3.62
1692 2555 2.172851 AACGTTAATGGCGAGGTTCA 57.827 45.000 0.00 0.00 0.00 3.18
1693 2556 2.172851 ACGTTAATGGCGAGGTTCAA 57.827 45.000 0.00 0.00 0.00 2.69
1694 2557 2.496111 ACGTTAATGGCGAGGTTCAAA 58.504 42.857 0.00 0.00 0.00 2.69
1695 2558 2.879646 ACGTTAATGGCGAGGTTCAAAA 59.120 40.909 0.00 0.00 0.00 2.44
1696 2559 3.058501 ACGTTAATGGCGAGGTTCAAAAG 60.059 43.478 0.00 0.00 0.00 2.27
1697 2560 3.187637 CGTTAATGGCGAGGTTCAAAAGA 59.812 43.478 0.00 0.00 0.00 2.52
1698 2561 4.669197 CGTTAATGGCGAGGTTCAAAAGAG 60.669 45.833 0.00 0.00 0.00 2.85
1699 2562 1.826385 ATGGCGAGGTTCAAAAGAGG 58.174 50.000 0.00 0.00 0.00 3.69
1700 2563 0.762418 TGGCGAGGTTCAAAAGAGGA 59.238 50.000 0.00 0.00 0.00 3.71
1701 2564 1.142060 TGGCGAGGTTCAAAAGAGGAA 59.858 47.619 0.00 0.00 0.00 3.36
1702 2565 2.227194 GGCGAGGTTCAAAAGAGGAAA 58.773 47.619 0.00 0.00 0.00 3.13
1703 2566 2.226674 GGCGAGGTTCAAAAGAGGAAAG 59.773 50.000 0.00 0.00 0.00 2.62
1704 2567 2.226674 GCGAGGTTCAAAAGAGGAAAGG 59.773 50.000 0.00 0.00 0.00 3.11
1705 2568 2.226674 CGAGGTTCAAAAGAGGAAAGGC 59.773 50.000 0.00 0.00 0.00 4.35
1706 2569 3.491342 GAGGTTCAAAAGAGGAAAGGCT 58.509 45.455 0.00 0.00 0.00 4.58
1707 2570 3.891977 GAGGTTCAAAAGAGGAAAGGCTT 59.108 43.478 0.00 0.00 0.00 4.35
1708 2571 3.638627 AGGTTCAAAAGAGGAAAGGCTTG 59.361 43.478 0.00 0.00 0.00 4.01
1709 2572 3.384668 GTTCAAAAGAGGAAAGGCTTGC 58.615 45.455 0.00 0.00 0.00 4.01
1710 2573 1.608590 TCAAAAGAGGAAAGGCTTGCG 59.391 47.619 0.00 0.00 0.00 4.85
1711 2574 0.961753 AAAAGAGGAAAGGCTTGCGG 59.038 50.000 0.00 0.00 0.00 5.69
1712 2575 0.178990 AAAGAGGAAAGGCTTGCGGT 60.179 50.000 0.00 0.00 0.00 5.68
1713 2576 0.890996 AAGAGGAAAGGCTTGCGGTG 60.891 55.000 0.00 0.00 0.00 4.94
1714 2577 2.282462 AGGAAAGGCTTGCGGTGG 60.282 61.111 0.00 0.00 0.00 4.61
1715 2578 2.282180 GGAAAGGCTTGCGGTGGA 60.282 61.111 0.00 0.00 0.00 4.02
1716 2579 1.678970 GGAAAGGCTTGCGGTGGAT 60.679 57.895 0.00 0.00 0.00 3.41
1717 2580 0.393808 GGAAAGGCTTGCGGTGGATA 60.394 55.000 0.00 0.00 0.00 2.59
1718 2581 0.733150 GAAAGGCTTGCGGTGGATAC 59.267 55.000 0.00 0.00 0.00 2.24
1719 2582 0.679960 AAAGGCTTGCGGTGGATACC 60.680 55.000 0.00 0.00 43.89 2.73
1720 2583 1.562672 AAGGCTTGCGGTGGATACCT 61.563 55.000 0.00 0.00 45.22 3.08
1721 2584 0.689745 AGGCTTGCGGTGGATACCTA 60.690 55.000 0.00 0.00 45.22 3.08
1722 2585 0.249911 GGCTTGCGGTGGATACCTAG 60.250 60.000 0.00 0.00 45.22 3.02
1723 2586 0.249911 GCTTGCGGTGGATACCTAGG 60.250 60.000 7.41 7.41 45.22 3.02
1724 2587 0.249911 CTTGCGGTGGATACCTAGGC 60.250 60.000 9.30 0.00 45.22 3.93
1725 2588 0.978667 TTGCGGTGGATACCTAGGCA 60.979 55.000 9.30 0.00 45.22 4.75
1726 2589 1.069258 GCGGTGGATACCTAGGCAC 59.931 63.158 9.30 8.72 45.22 5.01
1727 2590 1.746517 CGGTGGATACCTAGGCACC 59.253 63.158 20.72 20.72 45.22 5.01
1728 2591 1.755393 CGGTGGATACCTAGGCACCC 61.755 65.000 23.20 15.76 45.22 4.61
1729 2592 0.693092 GGTGGATACCTAGGCACCCA 60.693 60.000 20.23 15.98 43.97 4.51
1730 2593 0.759346 GTGGATACCTAGGCACCCAG 59.241 60.000 9.30 0.00 0.00 4.45
1731 2594 0.639943 TGGATACCTAGGCACCCAGA 59.360 55.000 9.30 0.00 0.00 3.86
1732 2595 1.343069 GGATACCTAGGCACCCAGAG 58.657 60.000 9.30 0.00 0.00 3.35
1733 2596 1.133136 GGATACCTAGGCACCCAGAGA 60.133 57.143 9.30 0.00 0.00 3.10
1734 2597 1.964933 GATACCTAGGCACCCAGAGAC 59.035 57.143 9.30 0.00 0.00 3.36
1735 2598 0.395311 TACCTAGGCACCCAGAGACG 60.395 60.000 9.30 0.00 0.00 4.18
1736 2599 1.379977 CCTAGGCACCCAGAGACGA 60.380 63.158 0.00 0.00 0.00 4.20
1737 2600 1.388065 CCTAGGCACCCAGAGACGAG 61.388 65.000 0.00 0.00 0.00 4.18
1738 2601 1.379977 TAGGCACCCAGAGACGAGG 60.380 63.158 0.00 0.00 0.00 4.63
1739 2602 1.859841 TAGGCACCCAGAGACGAGGA 61.860 60.000 0.00 0.00 0.00 3.71
1740 2603 2.283529 GGCACCCAGAGACGAGGAA 61.284 63.158 0.00 0.00 0.00 3.36
1741 2604 1.216710 GCACCCAGAGACGAGGAAG 59.783 63.158 0.00 0.00 0.00 3.46
1742 2605 1.893786 CACCCAGAGACGAGGAAGG 59.106 63.158 0.00 0.00 0.00 3.46
1743 2606 1.305381 ACCCAGAGACGAGGAAGGG 60.305 63.158 0.00 0.00 42.07 3.95
1744 2607 2.726351 CCCAGAGACGAGGAAGGGC 61.726 68.421 0.00 0.00 0.00 5.19
1745 2608 2.492090 CAGAGACGAGGAAGGGCG 59.508 66.667 0.00 0.00 0.00 6.13
1746 2609 2.035940 AGAGACGAGGAAGGGCGT 59.964 61.111 0.00 0.00 44.33 5.68
1747 2610 1.030488 CAGAGACGAGGAAGGGCGTA 61.030 60.000 0.00 0.00 41.34 4.42
1748 2611 0.748729 AGAGACGAGGAAGGGCGTAG 60.749 60.000 0.00 0.00 41.34 3.51
1761 2624 4.999550 CGTAGCAAGCGACGAAAC 57.000 55.556 20.37 0.00 45.38 2.78
1762 2625 1.055235 CGTAGCAAGCGACGAAACG 59.945 57.895 20.37 5.52 45.38 3.60
1774 2637 4.373771 GAAACGCTTCGGGGAGTT 57.626 55.556 0.00 0.00 0.00 3.01
1775 2638 1.866925 GAAACGCTTCGGGGAGTTG 59.133 57.895 0.00 0.00 30.29 3.16
1776 2639 0.601841 GAAACGCTTCGGGGAGTTGA 60.602 55.000 0.00 0.00 30.29 3.18
1777 2640 0.179040 AAACGCTTCGGGGAGTTGAA 60.179 50.000 0.00 0.00 30.29 2.69
1778 2641 0.179040 AACGCTTCGGGGAGTTGAAA 60.179 50.000 0.00 0.00 0.00 2.69
1779 2642 0.179040 ACGCTTCGGGGAGTTGAAAA 60.179 50.000 0.00 0.00 0.00 2.29
1780 2643 1.165270 CGCTTCGGGGAGTTGAAAAT 58.835 50.000 0.00 0.00 0.00 1.82
1781 2644 2.289819 ACGCTTCGGGGAGTTGAAAATA 60.290 45.455 0.00 0.00 0.00 1.40
1782 2645 2.745281 CGCTTCGGGGAGTTGAAAATAA 59.255 45.455 0.00 0.00 0.00 1.40
1783 2646 3.181510 CGCTTCGGGGAGTTGAAAATAAG 60.182 47.826 0.00 0.00 0.00 1.73
1784 2647 3.427638 GCTTCGGGGAGTTGAAAATAAGC 60.428 47.826 0.00 0.00 0.00 3.09
1785 2648 3.426787 TCGGGGAGTTGAAAATAAGCA 57.573 42.857 0.00 0.00 0.00 3.91
1786 2649 3.963129 TCGGGGAGTTGAAAATAAGCAT 58.037 40.909 0.00 0.00 0.00 3.79
1787 2650 5.105567 TCGGGGAGTTGAAAATAAGCATA 57.894 39.130 0.00 0.00 0.00 3.14
1788 2651 5.123227 TCGGGGAGTTGAAAATAAGCATAG 58.877 41.667 0.00 0.00 0.00 2.23
1789 2652 5.104693 TCGGGGAGTTGAAAATAAGCATAGA 60.105 40.000 0.00 0.00 0.00 1.98
1790 2653 5.765182 CGGGGAGTTGAAAATAAGCATAGAT 59.235 40.000 0.00 0.00 0.00 1.98
1791 2654 6.073003 CGGGGAGTTGAAAATAAGCATAGATC 60.073 42.308 0.00 0.00 0.00 2.75
1792 2655 6.207614 GGGGAGTTGAAAATAAGCATAGATCC 59.792 42.308 0.00 0.00 0.00 3.36
1793 2656 6.073003 GGGAGTTGAAAATAAGCATAGATCCG 60.073 42.308 0.00 0.00 0.00 4.18
1794 2657 6.073003 GGAGTTGAAAATAAGCATAGATCCGG 60.073 42.308 0.00 0.00 0.00 5.14
1795 2658 6.591935 AGTTGAAAATAAGCATAGATCCGGA 58.408 36.000 6.61 6.61 0.00 5.14
1830 2693 3.383505 GGTCAACCTTTTAAACTGCCTGT 59.616 43.478 0.00 0.00 0.00 4.00
1831 2694 4.359706 GTCAACCTTTTAAACTGCCTGTG 58.640 43.478 0.00 0.00 0.00 3.66
1852 2715 2.584236 GAATCCATGAGCAGGCAAGAT 58.416 47.619 0.00 0.00 0.00 2.40
1853 2716 1.982660 ATCCATGAGCAGGCAAGATG 58.017 50.000 0.00 0.00 0.00 2.90
1854 2717 0.750546 TCCATGAGCAGGCAAGATGC 60.751 55.000 0.00 0.00 44.08 3.91
1859 2722 2.517875 GCAGGCAAGATGCGGGAT 60.518 61.111 0.00 0.00 46.21 3.85
1860 2723 1.227943 GCAGGCAAGATGCGGGATA 60.228 57.895 0.00 0.00 46.21 2.59
1861 2724 1.233285 GCAGGCAAGATGCGGGATAG 61.233 60.000 0.00 0.00 46.21 2.08
1862 2725 0.107456 CAGGCAAGATGCGGGATAGT 59.893 55.000 0.00 0.00 46.21 2.12
1863 2726 0.107456 AGGCAAGATGCGGGATAGTG 59.893 55.000 0.00 0.00 46.21 2.74
1864 2727 0.179045 GGCAAGATGCGGGATAGTGT 60.179 55.000 0.00 0.00 46.21 3.55
1865 2728 1.221414 GCAAGATGCGGGATAGTGTC 58.779 55.000 0.00 0.00 31.71 3.67
1866 2729 2.142132 GCAAGATGCGGGATAGTGTCC 61.142 57.143 0.00 0.00 39.00 4.02
1897 2760 3.180980 CAGTTTGAAATGCAAGCGTCTTG 59.819 43.478 13.18 13.18 41.91 3.02
1964 2831 1.354040 CGCTAGCAGTGTGGAAGAAG 58.646 55.000 16.45 0.00 0.00 2.85
1990 2857 4.510711 CACAACATGCCTGCAAACATTTTA 59.489 37.500 0.00 0.00 0.00 1.52
2113 3455 0.035725 TGGTGCTCTCAGCTTCATGG 60.036 55.000 0.00 0.00 42.97 3.66
2150 3492 7.646526 CCTTATGCATTTGTGTGAGTCATTATG 59.353 37.037 3.54 0.00 0.00 1.90
2157 3499 6.990341 TTGTGTGAGTCATTATGATTCTGG 57.010 37.500 16.58 0.00 34.64 3.86
2158 3500 6.053632 TGTGTGAGTCATTATGATTCTGGT 57.946 37.500 16.58 0.00 34.64 4.00
2170 3512 4.656100 TGATTCTGGTTGGAGGAATTCA 57.344 40.909 7.93 0.00 30.98 2.57
2176 3519 4.584325 TCTGGTTGGAGGAATTCAAACAAG 59.416 41.667 7.93 8.73 40.79 3.16
2185 3528 7.154656 GGAGGAATTCAAACAAGCATTAAGTT 58.845 34.615 7.93 0.00 0.00 2.66
2230 3573 5.301551 TGAAAGCACTGGAAAAGCTTATCAA 59.698 36.000 0.00 0.00 46.95 2.57
2264 3607 6.496565 AGATTGATCTATCGGAATTGGAGACT 59.503 38.462 10.84 0.00 34.85 3.24
2296 3639 6.133356 ACCAACCAAAGATTCTGAAGGTTTA 58.867 36.000 12.45 0.00 37.26 2.01
2409 3753 6.345096 ACTGGCAGCAATACAAAATAACTT 57.655 33.333 15.89 0.00 0.00 2.66
2471 3815 0.532417 GCAGGATTGCTGCTCGAGAT 60.532 55.000 21.41 0.00 46.95 2.75
2496 3842 3.195825 CCTCTGAGGTCTTAAACGATGGT 59.804 47.826 15.76 0.00 0.00 3.55
2498 3844 3.119602 TCTGAGGTCTTAAACGATGGTCG 60.120 47.826 0.00 0.00 46.93 4.79
2501 3847 1.648504 GTCTTAAACGATGGTCGGGG 58.351 55.000 4.28 0.00 45.59 5.73
2503 3849 0.391927 CTTAAACGATGGTCGGGGCA 60.392 55.000 4.28 0.00 45.59 5.36
2509 3855 0.748005 CGATGGTCGGGGCATTTTCT 60.748 55.000 0.00 0.00 36.00 2.52
2518 3864 2.679639 CGGGGCATTTTCTAGCTGTGTA 60.680 50.000 0.00 0.00 0.00 2.90
2526 3872 6.524586 GCATTTTCTAGCTGTGTATGTTGAAC 59.475 38.462 0.00 0.00 0.00 3.18
2535 3881 5.042463 TGTGTATGTTGAACTCTTGGGAA 57.958 39.130 0.00 0.00 0.00 3.97
2553 3899 2.880890 GGAAGAACACTGCATCTGTTGT 59.119 45.455 13.22 7.69 31.83 3.32
2682 4033 9.241919 ACAATTGAATATTTGTATGGTCACAGA 57.758 29.630 13.59 0.00 34.42 3.41
2687 4038 8.321353 TGAATATTTGTATGGTCACAGACTCTT 58.679 33.333 0.00 0.00 39.50 2.85
2703 4067 6.013293 ACAGACTCTTAAGATTTTAGGCAGGT 60.013 38.462 5.44 0.00 0.00 4.00
2716 4080 4.689484 CAGGTCACCTGCACAGAG 57.311 61.111 12.03 0.00 45.13 3.35
2717 4081 2.052779 CAGGTCACCTGCACAGAGA 58.947 57.895 12.03 0.00 45.13 3.10
2739 4103 7.171167 AGAGATATTGCGATGTTGATTCAGAAG 59.829 37.037 0.00 0.00 0.00 2.85
2758 4122 3.771577 AGAGTTGTTTCAGTGGTAGGG 57.228 47.619 0.00 0.00 0.00 3.53
2762 4126 1.376812 GTTTCAGTGGTAGGGCCGG 60.377 63.158 0.00 0.00 41.21 6.13
2763 4127 3.262448 TTTCAGTGGTAGGGCCGGC 62.262 63.158 21.18 21.18 41.21 6.13
2797 4161 1.072266 AGGCACTATTGGTTGGACCA 58.928 50.000 0.00 0.00 42.68 4.02
2798 4162 1.004745 AGGCACTATTGGTTGGACCAG 59.995 52.381 0.00 0.00 44.66 4.00
2809 4173 3.047877 GGACCAGTTGTTCCGCCG 61.048 66.667 0.00 0.00 0.00 6.46
2839 4203 0.843984 ATAAACCCTGCCGCCACTAT 59.156 50.000 0.00 0.00 0.00 2.12
2840 4204 0.621609 TAAACCCTGCCGCCACTATT 59.378 50.000 0.00 0.00 0.00 1.73
2841 4205 0.965363 AAACCCTGCCGCCACTATTG 60.965 55.000 0.00 0.00 0.00 1.90
2843 4207 2.272146 CCTGCCGCCACTATTGGT 59.728 61.111 0.55 0.00 45.98 3.67
2844 4208 1.378514 CCTGCCGCCACTATTGGTT 60.379 57.895 0.55 0.00 45.98 3.67
2845 4209 1.656818 CCTGCCGCCACTATTGGTTG 61.657 60.000 0.55 0.00 45.98 3.77
2846 4210 1.656818 CTGCCGCCACTATTGGTTGG 61.657 60.000 0.55 4.79 45.98 3.77
2847 4211 1.377987 GCCGCCACTATTGGTTGGA 60.378 57.895 14.16 0.00 45.98 3.53
2848 4212 1.654023 GCCGCCACTATTGGTTGGAC 61.654 60.000 14.16 4.75 45.98 4.02
2849 4213 1.029947 CCGCCACTATTGGTTGGACC 61.030 60.000 6.67 0.00 45.98 4.46
2857 4221 2.112297 TGGTTGGACCAGTTCGCC 59.888 61.111 0.00 0.00 44.79 5.54
2858 4222 2.112297 GGTTGGACCAGTTCGCCA 59.888 61.111 0.00 0.00 38.42 5.69
2859 4223 2.258726 GGTTGGACCAGTTCGCCAC 61.259 63.158 0.00 0.00 38.42 5.01
2860 4224 2.112297 TTGGACCAGTTCGCCACC 59.888 61.111 0.00 0.00 0.00 4.61
2861 4225 3.818121 TTGGACCAGTTCGCCACCG 62.818 63.158 0.00 0.00 0.00 4.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 0.250124 CAACTCCCCGTTGTACTGCA 60.250 55.000 0.00 0.00 46.23 4.41
82 83 2.687935 CCCCTACGATCCAACCAATTTG 59.312 50.000 0.00 0.00 34.63 2.32
83 84 2.310647 ACCCCTACGATCCAACCAATTT 59.689 45.455 0.00 0.00 0.00 1.82
84 85 1.920351 ACCCCTACGATCCAACCAATT 59.080 47.619 0.00 0.00 0.00 2.32
85 86 1.211949 CACCCCTACGATCCAACCAAT 59.788 52.381 0.00 0.00 0.00 3.16
86 87 0.616371 CACCCCTACGATCCAACCAA 59.384 55.000 0.00 0.00 0.00 3.67
87 88 0.252330 TCACCCCTACGATCCAACCA 60.252 55.000 0.00 0.00 0.00 3.67
88 89 1.129058 ATCACCCCTACGATCCAACC 58.871 55.000 0.00 0.00 0.00 3.77
89 90 1.760613 TCATCACCCCTACGATCCAAC 59.239 52.381 0.00 0.00 0.00 3.77
90 91 2.168458 TCATCACCCCTACGATCCAA 57.832 50.000 0.00 0.00 0.00 3.53
91 92 2.398754 ATCATCACCCCTACGATCCA 57.601 50.000 0.00 0.00 0.00 3.41
92 93 3.771577 AAATCATCACCCCTACGATCC 57.228 47.619 0.00 0.00 0.00 3.36
93 94 5.470047 AGTAAATCATCACCCCTACGATC 57.530 43.478 0.00 0.00 0.00 3.69
94 95 5.365605 TGAAGTAAATCATCACCCCTACGAT 59.634 40.000 0.00 0.00 0.00 3.73
95 96 4.712829 TGAAGTAAATCATCACCCCTACGA 59.287 41.667 0.00 0.00 0.00 3.43
96 97 4.809426 GTGAAGTAAATCATCACCCCTACG 59.191 45.833 0.00 0.00 38.39 3.51
97 98 4.809426 CGTGAAGTAAATCATCACCCCTAC 59.191 45.833 0.00 0.00 40.37 3.18
98 99 4.141801 CCGTGAAGTAAATCATCACCCCTA 60.142 45.833 0.00 0.00 40.37 3.53
99 100 3.370527 CCGTGAAGTAAATCATCACCCCT 60.371 47.826 0.00 0.00 40.37 4.79
100 101 2.943033 CCGTGAAGTAAATCATCACCCC 59.057 50.000 0.00 0.00 40.37 4.95
101 102 2.943033 CCCGTGAAGTAAATCATCACCC 59.057 50.000 0.00 0.00 40.37 4.61
102 103 2.354821 GCCCGTGAAGTAAATCATCACC 59.645 50.000 0.00 0.00 40.37 4.02
103 104 2.030457 CGCCCGTGAAGTAAATCATCAC 59.970 50.000 0.00 0.00 40.17 3.06
104 105 2.093921 TCGCCCGTGAAGTAAATCATCA 60.094 45.455 0.00 0.00 0.00 3.07
105 106 2.540101 CTCGCCCGTGAAGTAAATCATC 59.460 50.000 0.00 0.00 0.00 2.92
106 107 2.550978 CTCGCCCGTGAAGTAAATCAT 58.449 47.619 0.00 0.00 0.00 2.45
107 108 1.404986 CCTCGCCCGTGAAGTAAATCA 60.405 52.381 0.00 0.00 0.00 2.57
108 109 1.287425 CCTCGCCCGTGAAGTAAATC 58.713 55.000 0.00 0.00 0.00 2.17
109 110 0.611714 ACCTCGCCCGTGAAGTAAAT 59.388 50.000 0.00 0.00 0.00 1.40
110 111 0.037975 GACCTCGCCCGTGAAGTAAA 60.038 55.000 0.00 0.00 0.00 2.01
111 112 0.896940 AGACCTCGCCCGTGAAGTAA 60.897 55.000 0.00 0.00 0.00 2.24
112 113 1.303888 AGACCTCGCCCGTGAAGTA 60.304 57.895 0.00 0.00 0.00 2.24
113 114 2.600769 AGACCTCGCCCGTGAAGT 60.601 61.111 0.00 0.00 0.00 3.01
114 115 2.182030 GAGACCTCGCCCGTGAAG 59.818 66.667 0.00 0.00 0.00 3.02
115 116 2.282958 AGAGACCTCGCCCGTGAA 60.283 61.111 0.00 0.00 34.09 3.18
116 117 3.062466 CAGAGACCTCGCCCGTGA 61.062 66.667 0.00 0.00 34.09 4.35
117 118 4.135153 CCAGAGACCTCGCCCGTG 62.135 72.222 0.00 0.00 34.09 4.94
118 119 4.680537 ACCAGAGACCTCGCCCGT 62.681 66.667 0.00 0.00 34.09 5.28
119 120 3.358076 GAACCAGAGACCTCGCCCG 62.358 68.421 0.00 0.00 34.09 6.13
120 121 1.827399 TTGAACCAGAGACCTCGCCC 61.827 60.000 0.00 0.00 34.09 6.13
121 122 0.390472 CTTGAACCAGAGACCTCGCC 60.390 60.000 0.00 0.00 34.09 5.54
122 123 0.318762 ACTTGAACCAGAGACCTCGC 59.681 55.000 0.00 0.00 34.09 5.03
123 124 1.067495 GGACTTGAACCAGAGACCTCG 60.067 57.143 0.00 0.00 34.09 4.63
124 125 1.971357 TGGACTTGAACCAGAGACCTC 59.029 52.381 0.00 0.00 33.22 3.85
125 126 2.103153 TGGACTTGAACCAGAGACCT 57.897 50.000 0.00 0.00 33.22 3.85
132 133 0.038166 GCCATCCTGGACTTGAACCA 59.962 55.000 0.00 0.00 40.96 3.67
133 134 0.681243 GGCCATCCTGGACTTGAACC 60.681 60.000 0.00 0.00 44.12 3.62
134 135 2.873797 GGCCATCCTGGACTTGAAC 58.126 57.895 0.00 0.00 44.12 3.18
141 142 3.414193 CAGCTGGGCCATCCTGGA 61.414 66.667 20.70 0.00 40.96 3.86
479 1009 2.229062 TCAGTAGAGTCTTTCAGTGGCG 59.771 50.000 0.00 0.00 0.00 5.69
627 1157 2.041620 CCAACTTGATCCTCTTCCCCAA 59.958 50.000 0.00 0.00 0.00 4.12
902 1432 6.341316 CCCGACTCTTTGATCTTAAGAATGA 58.659 40.000 9.71 0.61 31.67 2.57
1113 1643 2.711547 GGGTTCTACCATAGAGGCCAAT 59.288 50.000 5.01 0.00 41.02 3.16
1478 2341 0.391263 GTAAACCACCGCCTCTCAGG 60.391 60.000 0.00 0.00 38.80 3.86
1479 2342 0.391263 GGTAAACCACCGCCTCTCAG 60.391 60.000 0.00 0.00 37.63 3.35
1480 2343 1.675219 GGTAAACCACCGCCTCTCA 59.325 57.895 0.00 0.00 37.63 3.27
1481 2344 4.611961 GGTAAACCACCGCCTCTC 57.388 61.111 0.00 0.00 37.63 3.20
1489 2352 1.969589 CCGCCACAGGGTAAACCAC 60.970 63.158 0.81 0.00 43.89 4.16
1490 2353 1.493854 ATCCGCCACAGGGTAAACCA 61.494 55.000 0.81 0.00 43.89 3.67
1491 2354 1.029947 CATCCGCCACAGGGTAAACC 61.030 60.000 0.00 0.00 40.67 3.27
1492 2355 0.322187 ACATCCGCCACAGGGTAAAC 60.322 55.000 0.00 0.00 36.17 2.01
1493 2356 0.035820 GACATCCGCCACAGGGTAAA 60.036 55.000 0.00 0.00 36.17 2.01
1494 2357 1.195442 TGACATCCGCCACAGGGTAA 61.195 55.000 0.00 0.00 36.17 2.85
1495 2358 1.610967 TGACATCCGCCACAGGGTA 60.611 57.895 0.00 0.00 36.17 3.69
1496 2359 2.927856 TGACATCCGCCACAGGGT 60.928 61.111 0.00 0.00 36.17 4.34
1497 2360 2.124983 CTGACATCCGCCACAGGG 60.125 66.667 0.00 0.00 37.18 4.45
1498 2361 2.821366 GCTGACATCCGCCACAGG 60.821 66.667 0.00 0.00 0.00 4.00
1499 2362 3.190849 CGCTGACATCCGCCACAG 61.191 66.667 0.00 0.00 0.00 3.66
1500 2363 4.758251 CCGCTGACATCCGCCACA 62.758 66.667 0.00 0.00 0.00 4.17
1501 2364 4.760047 ACCGCTGACATCCGCCAC 62.760 66.667 0.00 0.00 0.00 5.01
1502 2365 3.950794 GAACCGCTGACATCCGCCA 62.951 63.158 0.00 0.00 0.00 5.69
1503 2366 3.195698 GAACCGCTGACATCCGCC 61.196 66.667 0.00 0.00 0.00 6.13
1504 2367 3.554692 CGAACCGCTGACATCCGC 61.555 66.667 0.00 0.00 0.00 5.54
1505 2368 1.874019 CTCGAACCGCTGACATCCG 60.874 63.158 0.00 0.00 0.00 4.18
1506 2369 0.802607 GACTCGAACCGCTGACATCC 60.803 60.000 0.00 0.00 0.00 3.51
1507 2370 0.802607 GGACTCGAACCGCTGACATC 60.803 60.000 0.00 0.00 0.00 3.06
1508 2371 1.215647 GGACTCGAACCGCTGACAT 59.784 57.895 0.00 0.00 0.00 3.06
1509 2372 2.649034 GGACTCGAACCGCTGACA 59.351 61.111 0.00 0.00 0.00 3.58
1510 2373 2.504244 CGGACTCGAACCGCTGAC 60.504 66.667 15.72 0.00 43.74 3.51
1516 2379 1.269154 GGAGATAAGCGGACTCGAACC 60.269 57.143 0.00 0.00 39.00 3.62
1517 2380 1.404391 TGGAGATAAGCGGACTCGAAC 59.596 52.381 0.00 0.00 39.00 3.95
1518 2381 1.676529 CTGGAGATAAGCGGACTCGAA 59.323 52.381 0.00 0.00 39.00 3.71
1519 2382 1.309950 CTGGAGATAAGCGGACTCGA 58.690 55.000 0.00 0.00 39.00 4.04
1520 2383 0.318275 GCTGGAGATAAGCGGACTCG 60.318 60.000 0.00 0.00 39.81 4.18
1521 2384 0.032815 GGCTGGAGATAAGCGGACTC 59.967 60.000 0.00 0.00 41.78 3.36
1522 2385 1.403687 GGGCTGGAGATAAGCGGACT 61.404 60.000 0.00 0.00 41.78 3.85
1523 2386 1.069935 GGGCTGGAGATAAGCGGAC 59.930 63.158 0.00 0.00 41.78 4.79
1524 2387 2.498941 CGGGCTGGAGATAAGCGGA 61.499 63.158 0.00 0.00 41.78 5.54
1525 2388 2.029666 CGGGCTGGAGATAAGCGG 59.970 66.667 0.00 0.00 41.78 5.52
1526 2389 1.592669 CACGGGCTGGAGATAAGCG 60.593 63.158 0.00 0.00 41.78 4.68
1527 2390 0.178068 TTCACGGGCTGGAGATAAGC 59.822 55.000 0.00 0.00 40.06 3.09
1528 2391 1.482593 AGTTCACGGGCTGGAGATAAG 59.517 52.381 0.00 0.00 0.00 1.73
1529 2392 1.568504 AGTTCACGGGCTGGAGATAA 58.431 50.000 0.00 0.00 0.00 1.75
1530 2393 1.568504 AAGTTCACGGGCTGGAGATA 58.431 50.000 0.00 0.00 0.00 1.98
1531 2394 1.482593 CTAAGTTCACGGGCTGGAGAT 59.517 52.381 0.00 0.00 0.00 2.75
1532 2395 0.895530 CTAAGTTCACGGGCTGGAGA 59.104 55.000 0.00 0.00 0.00 3.71
1533 2396 0.741221 GCTAAGTTCACGGGCTGGAG 60.741 60.000 0.00 0.00 0.00 3.86
1534 2397 1.295423 GCTAAGTTCACGGGCTGGA 59.705 57.895 0.00 0.00 0.00 3.86
1535 2398 2.100631 CGCTAAGTTCACGGGCTGG 61.101 63.158 0.00 0.00 0.00 4.85
1536 2399 2.100631 CCGCTAAGTTCACGGGCTG 61.101 63.158 8.29 0.00 43.23 4.85
1537 2400 1.614241 ATCCGCTAAGTTCACGGGCT 61.614 55.000 14.52 2.77 46.87 5.19
1538 2401 0.103572 TATCCGCTAAGTTCACGGGC 59.896 55.000 14.52 0.00 46.87 6.13
1539 2402 1.407979 AGTATCCGCTAAGTTCACGGG 59.592 52.381 14.52 0.00 46.87 5.28
1541 2404 7.428761 GCTATAATAGTATCCGCTAAGTTCACG 59.571 40.741 0.00 0.00 0.00 4.35
1542 2405 7.428761 CGCTATAATAGTATCCGCTAAGTTCAC 59.571 40.741 0.00 0.00 0.00 3.18
1543 2406 7.335171 TCGCTATAATAGTATCCGCTAAGTTCA 59.665 37.037 0.00 0.00 0.00 3.18
1544 2407 7.692088 TCGCTATAATAGTATCCGCTAAGTTC 58.308 38.462 0.00 0.00 0.00 3.01
1545 2408 7.621428 TCGCTATAATAGTATCCGCTAAGTT 57.379 36.000 0.00 0.00 0.00 2.66
1546 2409 7.804843 ATCGCTATAATAGTATCCGCTAAGT 57.195 36.000 0.00 0.00 0.00 2.24
1547 2410 7.958567 GCTATCGCTATAATAGTATCCGCTAAG 59.041 40.741 0.00 0.00 0.00 2.18
1548 2411 7.443272 TGCTATCGCTATAATAGTATCCGCTAA 59.557 37.037 0.00 0.00 36.97 3.09
1549 2412 6.932960 TGCTATCGCTATAATAGTATCCGCTA 59.067 38.462 0.00 0.00 36.97 4.26
1550 2413 5.763698 TGCTATCGCTATAATAGTATCCGCT 59.236 40.000 0.00 0.00 36.97 5.52
1551 2414 5.852229 GTGCTATCGCTATAATAGTATCCGC 59.148 44.000 0.00 0.00 36.97 5.54
1552 2415 6.372185 GGTGCTATCGCTATAATAGTATCCG 58.628 44.000 0.00 0.00 36.97 4.18
1553 2416 6.204301 TCGGTGCTATCGCTATAATAGTATCC 59.796 42.308 0.00 0.00 36.97 2.59
1554 2417 7.187244 TCGGTGCTATCGCTATAATAGTATC 57.813 40.000 0.00 0.00 36.97 2.24
1555 2418 7.563888 TTCGGTGCTATCGCTATAATAGTAT 57.436 36.000 0.00 0.00 36.97 2.12
1556 2419 6.990341 TTCGGTGCTATCGCTATAATAGTA 57.010 37.500 0.00 0.00 36.97 1.82
1557 2420 5.892160 TTCGGTGCTATCGCTATAATAGT 57.108 39.130 0.00 0.00 36.97 2.12
1558 2421 7.757097 AAATTCGGTGCTATCGCTATAATAG 57.243 36.000 0.00 0.00 36.97 1.73
1559 2422 7.412563 GCAAAATTCGGTGCTATCGCTATAATA 60.413 37.037 2.38 0.00 37.78 0.98
1560 2423 6.620733 GCAAAATTCGGTGCTATCGCTATAAT 60.621 38.462 2.38 0.00 37.78 1.28
1561 2424 5.333798 GCAAAATTCGGTGCTATCGCTATAA 60.334 40.000 2.38 0.00 37.78 0.98
1562 2425 4.151689 GCAAAATTCGGTGCTATCGCTATA 59.848 41.667 2.38 0.00 37.78 1.31
1563 2426 3.058914 GCAAAATTCGGTGCTATCGCTAT 60.059 43.478 2.38 0.00 37.78 2.97
1564 2427 2.286833 GCAAAATTCGGTGCTATCGCTA 59.713 45.455 2.38 0.00 37.78 4.26
1565 2428 1.064060 GCAAAATTCGGTGCTATCGCT 59.936 47.619 2.38 0.00 37.78 4.93
1566 2429 1.466855 GCAAAATTCGGTGCTATCGC 58.533 50.000 2.38 0.00 37.78 4.58
1567 2430 1.400142 TGGCAAAATTCGGTGCTATCG 59.600 47.619 8.19 0.00 40.70 2.92
1568 2431 3.502191 TTGGCAAAATTCGGTGCTATC 57.498 42.857 0.00 0.00 40.70 2.08
1569 2432 4.081752 TGAATTGGCAAAATTCGGTGCTAT 60.082 37.500 3.01 1.88 40.70 2.97
1570 2433 3.256879 TGAATTGGCAAAATTCGGTGCTA 59.743 39.130 3.01 0.89 40.70 3.49
1571 2434 2.036992 TGAATTGGCAAAATTCGGTGCT 59.963 40.909 3.01 0.00 40.70 4.40
1572 2435 2.411904 TGAATTGGCAAAATTCGGTGC 58.588 42.857 3.01 1.15 38.99 5.01
1573 2436 2.412770 GCTGAATTGGCAAAATTCGGTG 59.587 45.455 23.41 15.05 42.27 4.94
1574 2437 2.036992 TGCTGAATTGGCAAAATTCGGT 59.963 40.909 23.41 0.00 42.27 4.69
1575 2438 2.669434 CTGCTGAATTGGCAAAATTCGG 59.331 45.455 20.63 20.63 42.84 4.30
1576 2439 3.319755 ACTGCTGAATTGGCAAAATTCG 58.680 40.909 3.01 12.19 38.99 3.34
1577 2440 4.143263 CGAACTGCTGAATTGGCAAAATTC 60.143 41.667 3.01 14.18 39.30 2.17
1578 2441 3.742369 CGAACTGCTGAATTGGCAAAATT 59.258 39.130 3.01 0.00 39.30 1.82
1579 2442 3.005684 TCGAACTGCTGAATTGGCAAAAT 59.994 39.130 3.01 0.00 39.30 1.82
1580 2443 2.360483 TCGAACTGCTGAATTGGCAAAA 59.640 40.909 3.01 0.00 39.30 2.44
1581 2444 1.952990 TCGAACTGCTGAATTGGCAAA 59.047 42.857 3.01 0.00 39.30 3.68
1582 2445 1.603456 TCGAACTGCTGAATTGGCAA 58.397 45.000 0.68 0.68 39.30 4.52
1583 2446 1.739466 GATCGAACTGCTGAATTGGCA 59.261 47.619 0.00 3.21 38.10 4.92
1584 2447 2.012673 AGATCGAACTGCTGAATTGGC 58.987 47.619 0.00 0.00 0.00 4.52
1585 2448 5.052481 TCATAGATCGAACTGCTGAATTGG 58.948 41.667 5.31 0.00 0.00 3.16
1586 2449 6.782298 ATCATAGATCGAACTGCTGAATTG 57.218 37.500 5.31 0.00 0.00 2.32
1587 2450 7.496920 TGAAATCATAGATCGAACTGCTGAATT 59.503 33.333 5.31 7.59 0.00 2.17
1588 2451 6.988580 TGAAATCATAGATCGAACTGCTGAAT 59.011 34.615 5.31 0.00 0.00 2.57
1589 2452 6.256539 GTGAAATCATAGATCGAACTGCTGAA 59.743 38.462 5.31 0.00 0.00 3.02
1590 2453 5.750547 GTGAAATCATAGATCGAACTGCTGA 59.249 40.000 5.31 8.58 0.00 4.26
1591 2454 5.521372 TGTGAAATCATAGATCGAACTGCTG 59.479 40.000 5.31 3.38 0.00 4.41
1592 2455 5.664457 TGTGAAATCATAGATCGAACTGCT 58.336 37.500 5.31 0.00 0.00 4.24
1593 2456 5.973651 TGTGAAATCATAGATCGAACTGC 57.026 39.130 5.31 0.00 0.00 4.40
1594 2457 8.134905 TGAATGTGAAATCATAGATCGAACTG 57.865 34.615 5.31 0.00 0.00 3.16
1595 2458 8.771766 CATGAATGTGAAATCATAGATCGAACT 58.228 33.333 0.00 0.00 34.61 3.01
1596 2459 8.013947 CCATGAATGTGAAATCATAGATCGAAC 58.986 37.037 0.00 0.00 34.61 3.95
1597 2460 7.933033 TCCATGAATGTGAAATCATAGATCGAA 59.067 33.333 0.00 0.00 34.61 3.71
1598 2461 7.386025 GTCCATGAATGTGAAATCATAGATCGA 59.614 37.037 0.00 0.00 34.61 3.59
1599 2462 7.516481 GTCCATGAATGTGAAATCATAGATCG 58.484 38.462 0.00 0.00 34.61 3.69
1600 2463 7.172190 ACGTCCATGAATGTGAAATCATAGATC 59.828 37.037 0.00 0.00 34.61 2.75
1601 2464 6.994496 ACGTCCATGAATGTGAAATCATAGAT 59.006 34.615 0.00 0.00 34.61 1.98
1602 2465 6.348498 ACGTCCATGAATGTGAAATCATAGA 58.652 36.000 0.00 0.00 34.61 1.98
1603 2466 6.609237 ACGTCCATGAATGTGAAATCATAG 57.391 37.500 0.00 0.00 34.61 2.23
1604 2467 6.597280 TCAACGTCCATGAATGTGAAATCATA 59.403 34.615 0.00 0.00 34.61 2.15
1605 2468 5.415389 TCAACGTCCATGAATGTGAAATCAT 59.585 36.000 0.00 0.00 36.74 2.45
1606 2469 4.759183 TCAACGTCCATGAATGTGAAATCA 59.241 37.500 0.00 0.00 0.00 2.57
1607 2470 5.295431 TCAACGTCCATGAATGTGAAATC 57.705 39.130 0.00 0.00 0.00 2.17
1608 2471 5.902613 ATCAACGTCCATGAATGTGAAAT 57.097 34.783 0.00 0.00 0.00 2.17
1609 2472 6.652900 TCTTATCAACGTCCATGAATGTGAAA 59.347 34.615 0.00 0.00 0.00 2.69
1610 2473 6.169800 TCTTATCAACGTCCATGAATGTGAA 58.830 36.000 0.00 0.00 0.00 3.18
1611 2474 5.729510 TCTTATCAACGTCCATGAATGTGA 58.270 37.500 0.00 0.00 0.00 3.58
1612 2475 6.293081 GGATCTTATCAACGTCCATGAATGTG 60.293 42.308 0.00 0.00 0.00 3.21
1613 2476 5.760253 GGATCTTATCAACGTCCATGAATGT 59.240 40.000 0.00 0.00 0.00 2.71
1614 2477 5.994054 AGGATCTTATCAACGTCCATGAATG 59.006 40.000 0.00 0.00 0.00 2.67
1615 2478 6.179906 AGGATCTTATCAACGTCCATGAAT 57.820 37.500 0.00 0.00 0.00 2.57
1616 2479 5.614324 AGGATCTTATCAACGTCCATGAA 57.386 39.130 0.00 0.00 0.00 2.57
1617 2480 5.453339 GGAAGGATCTTATCAACGTCCATGA 60.453 44.000 0.00 0.00 0.00 3.07
1618 2481 4.752101 GGAAGGATCTTATCAACGTCCATG 59.248 45.833 0.00 0.00 0.00 3.66
1619 2482 4.408921 TGGAAGGATCTTATCAACGTCCAT 59.591 41.667 0.00 0.00 0.00 3.41
1620 2483 3.772572 TGGAAGGATCTTATCAACGTCCA 59.227 43.478 0.00 0.00 0.00 4.02
1621 2484 4.402056 TGGAAGGATCTTATCAACGTCC 57.598 45.455 0.00 0.00 0.00 4.79
1622 2485 6.927294 AAATGGAAGGATCTTATCAACGTC 57.073 37.500 0.00 0.00 0.00 4.34
1623 2486 7.565680 ACTAAATGGAAGGATCTTATCAACGT 58.434 34.615 0.00 0.00 0.00 3.99
1624 2487 9.197694 CTACTAAATGGAAGGATCTTATCAACG 57.802 37.037 0.00 0.00 0.00 4.10
1625 2488 8.994170 GCTACTAAATGGAAGGATCTTATCAAC 58.006 37.037 0.00 0.00 0.00 3.18
1626 2489 8.713971 TGCTACTAAATGGAAGGATCTTATCAA 58.286 33.333 0.00 0.00 0.00 2.57
1627 2490 8.150945 GTGCTACTAAATGGAAGGATCTTATCA 58.849 37.037 0.00 0.00 0.00 2.15
1628 2491 7.604545 GGTGCTACTAAATGGAAGGATCTTATC 59.395 40.741 0.00 0.00 0.00 1.75
1629 2492 7.293535 AGGTGCTACTAAATGGAAGGATCTTAT 59.706 37.037 0.00 0.00 0.00 1.73
1630 2493 6.615726 AGGTGCTACTAAATGGAAGGATCTTA 59.384 38.462 0.00 0.00 0.00 2.10
1631 2494 5.430089 AGGTGCTACTAAATGGAAGGATCTT 59.570 40.000 0.00 0.00 0.00 2.40
1632 2495 4.971924 AGGTGCTACTAAATGGAAGGATCT 59.028 41.667 0.00 0.00 0.00 2.75
1633 2496 5.297569 AGGTGCTACTAAATGGAAGGATC 57.702 43.478 0.00 0.00 0.00 3.36
1634 2497 5.717119 AAGGTGCTACTAAATGGAAGGAT 57.283 39.130 0.00 0.00 0.00 3.24
1635 2498 5.130477 CCTAAGGTGCTACTAAATGGAAGGA 59.870 44.000 0.00 0.00 0.00 3.36
1636 2499 5.130477 TCCTAAGGTGCTACTAAATGGAAGG 59.870 44.000 0.00 0.00 0.00 3.46
1637 2500 6.235231 TCCTAAGGTGCTACTAAATGGAAG 57.765 41.667 0.00 0.00 0.00 3.46
1638 2501 6.409234 CCATCCTAAGGTGCTACTAAATGGAA 60.409 42.308 0.00 0.00 33.38 3.53
1639 2502 5.071788 CCATCCTAAGGTGCTACTAAATGGA 59.928 44.000 0.00 0.00 33.38 3.41
1640 2503 5.308825 CCATCCTAAGGTGCTACTAAATGG 58.691 45.833 0.00 0.00 0.00 3.16
1641 2504 4.757149 GCCATCCTAAGGTGCTACTAAATG 59.243 45.833 0.00 0.00 0.00 2.32
1642 2505 4.412199 TGCCATCCTAAGGTGCTACTAAAT 59.588 41.667 0.00 0.00 0.00 1.40
1643 2506 3.778075 TGCCATCCTAAGGTGCTACTAAA 59.222 43.478 0.00 0.00 0.00 1.85
1644 2507 3.380393 TGCCATCCTAAGGTGCTACTAA 58.620 45.455 0.00 0.00 0.00 2.24
1645 2508 3.040655 TGCCATCCTAAGGTGCTACTA 57.959 47.619 0.00 0.00 0.00 1.82
1646 2509 1.879575 TGCCATCCTAAGGTGCTACT 58.120 50.000 0.00 0.00 0.00 2.57
1647 2510 2.938956 ATGCCATCCTAAGGTGCTAC 57.061 50.000 0.00 0.00 0.00 3.58
1648 2511 2.303022 GCTATGCCATCCTAAGGTGCTA 59.697 50.000 0.00 0.00 0.00 3.49
1649 2512 1.072965 GCTATGCCATCCTAAGGTGCT 59.927 52.381 0.00 0.00 0.00 4.40
1650 2513 1.528129 GCTATGCCATCCTAAGGTGC 58.472 55.000 0.00 0.00 0.00 5.01
1663 2526 3.606153 CGCCATTAACGTTAAGGCTATGC 60.606 47.826 33.67 26.21 43.07 3.14
1664 2527 3.805422 TCGCCATTAACGTTAAGGCTATG 59.195 43.478 33.67 25.93 43.07 2.23
1665 2528 4.056050 CTCGCCATTAACGTTAAGGCTAT 58.944 43.478 33.67 17.44 43.07 2.97
1666 2529 3.450578 CTCGCCATTAACGTTAAGGCTA 58.549 45.455 33.67 28.16 43.07 3.93
1667 2530 2.277084 CTCGCCATTAACGTTAAGGCT 58.723 47.619 33.67 17.98 43.07 4.58
1668 2531 1.329599 CCTCGCCATTAACGTTAAGGC 59.670 52.381 30.92 30.92 41.86 4.35
1669 2532 2.624636 ACCTCGCCATTAACGTTAAGG 58.375 47.619 23.78 23.05 0.00 2.69
1670 2533 3.680937 TGAACCTCGCCATTAACGTTAAG 59.319 43.478 23.78 13.56 0.00 1.85
1671 2534 3.661944 TGAACCTCGCCATTAACGTTAA 58.338 40.909 22.12 22.12 0.00 2.01
1672 2535 3.316071 TGAACCTCGCCATTAACGTTA 57.684 42.857 3.29 3.29 0.00 3.18
1673 2536 2.172851 TGAACCTCGCCATTAACGTT 57.827 45.000 5.88 5.88 0.00 3.99
1674 2537 2.172851 TTGAACCTCGCCATTAACGT 57.827 45.000 0.00 0.00 0.00 3.99
1675 2538 3.187637 TCTTTTGAACCTCGCCATTAACG 59.812 43.478 0.00 0.00 0.00 3.18
1676 2539 4.379499 CCTCTTTTGAACCTCGCCATTAAC 60.379 45.833 0.00 0.00 0.00 2.01
1677 2540 3.756434 CCTCTTTTGAACCTCGCCATTAA 59.244 43.478 0.00 0.00 0.00 1.40
1678 2541 3.008594 TCCTCTTTTGAACCTCGCCATTA 59.991 43.478 0.00 0.00 0.00 1.90
1679 2542 2.162681 CCTCTTTTGAACCTCGCCATT 58.837 47.619 0.00 0.00 0.00 3.16
1680 2543 1.351017 TCCTCTTTTGAACCTCGCCAT 59.649 47.619 0.00 0.00 0.00 4.40
1681 2544 0.762418 TCCTCTTTTGAACCTCGCCA 59.238 50.000 0.00 0.00 0.00 5.69
1682 2545 1.892209 TTCCTCTTTTGAACCTCGCC 58.108 50.000 0.00 0.00 0.00 5.54
1683 2546 2.226674 CCTTTCCTCTTTTGAACCTCGC 59.773 50.000 0.00 0.00 0.00 5.03
1684 2547 2.226674 GCCTTTCCTCTTTTGAACCTCG 59.773 50.000 0.00 0.00 0.00 4.63
1685 2548 3.491342 AGCCTTTCCTCTTTTGAACCTC 58.509 45.455 0.00 0.00 0.00 3.85
1686 2549 3.602205 AGCCTTTCCTCTTTTGAACCT 57.398 42.857 0.00 0.00 0.00 3.50
1687 2550 3.800261 GCAAGCCTTTCCTCTTTTGAACC 60.800 47.826 0.00 0.00 0.00 3.62
1688 2551 3.384668 GCAAGCCTTTCCTCTTTTGAAC 58.615 45.455 0.00 0.00 0.00 3.18
1689 2552 2.034558 CGCAAGCCTTTCCTCTTTTGAA 59.965 45.455 0.00 0.00 0.00 2.69
1690 2553 1.608590 CGCAAGCCTTTCCTCTTTTGA 59.391 47.619 0.00 0.00 0.00 2.69
1691 2554 1.336240 CCGCAAGCCTTTCCTCTTTTG 60.336 52.381 0.00 0.00 0.00 2.44
1692 2555 0.961753 CCGCAAGCCTTTCCTCTTTT 59.038 50.000 0.00 0.00 0.00 2.27
1693 2556 0.178990 ACCGCAAGCCTTTCCTCTTT 60.179 50.000 0.00 0.00 0.00 2.52
1694 2557 0.890996 CACCGCAAGCCTTTCCTCTT 60.891 55.000 0.00 0.00 0.00 2.85
1695 2558 1.302832 CACCGCAAGCCTTTCCTCT 60.303 57.895 0.00 0.00 0.00 3.69
1696 2559 2.335712 CCACCGCAAGCCTTTCCTC 61.336 63.158 0.00 0.00 0.00 3.71
1697 2560 2.142292 ATCCACCGCAAGCCTTTCCT 62.142 55.000 0.00 0.00 0.00 3.36
1698 2561 0.393808 TATCCACCGCAAGCCTTTCC 60.394 55.000 0.00 0.00 0.00 3.13
1699 2562 0.733150 GTATCCACCGCAAGCCTTTC 59.267 55.000 0.00 0.00 0.00 2.62
1700 2563 0.679960 GGTATCCACCGCAAGCCTTT 60.680 55.000 0.00 0.00 34.36 3.11
1701 2564 1.077716 GGTATCCACCGCAAGCCTT 60.078 57.895 0.00 0.00 34.36 4.35
1702 2565 2.590092 GGTATCCACCGCAAGCCT 59.410 61.111 0.00 0.00 34.36 4.58
1710 2573 0.693092 TGGGTGCCTAGGTATCCACC 60.693 60.000 26.67 23.97 45.37 4.61
1711 2574 0.759346 CTGGGTGCCTAGGTATCCAC 59.241 60.000 26.67 16.89 36.09 4.02
1712 2575 0.639943 TCTGGGTGCCTAGGTATCCA 59.360 55.000 28.14 28.14 38.66 3.41
1713 2576 1.133136 TCTCTGGGTGCCTAGGTATCC 60.133 57.143 21.74 21.74 0.00 2.59
1714 2577 1.964933 GTCTCTGGGTGCCTAGGTATC 59.035 57.143 11.31 6.02 0.00 2.24
1715 2578 1.754555 CGTCTCTGGGTGCCTAGGTAT 60.755 57.143 11.31 0.00 0.00 2.73
1716 2579 0.395311 CGTCTCTGGGTGCCTAGGTA 60.395 60.000 11.31 2.03 0.00 3.08
1717 2580 1.682684 CGTCTCTGGGTGCCTAGGT 60.683 63.158 11.31 0.00 0.00 3.08
1718 2581 1.379977 TCGTCTCTGGGTGCCTAGG 60.380 63.158 3.67 3.67 0.00 3.02
1719 2582 1.388065 CCTCGTCTCTGGGTGCCTAG 61.388 65.000 0.00 0.00 0.00 3.02
1720 2583 1.379977 CCTCGTCTCTGGGTGCCTA 60.380 63.158 0.00 0.00 0.00 3.93
1721 2584 2.681778 CCTCGTCTCTGGGTGCCT 60.682 66.667 0.00 0.00 0.00 4.75
1722 2585 2.232298 CTTCCTCGTCTCTGGGTGCC 62.232 65.000 0.00 0.00 0.00 5.01
1723 2586 1.216710 CTTCCTCGTCTCTGGGTGC 59.783 63.158 0.00 0.00 0.00 5.01
1724 2587 1.608717 CCCTTCCTCGTCTCTGGGTG 61.609 65.000 0.00 0.00 0.00 4.61
1725 2588 1.305381 CCCTTCCTCGTCTCTGGGT 60.305 63.158 0.00 0.00 0.00 4.51
1726 2589 2.726351 GCCCTTCCTCGTCTCTGGG 61.726 68.421 0.00 0.00 37.76 4.45
1727 2590 2.896443 GCCCTTCCTCGTCTCTGG 59.104 66.667 0.00 0.00 0.00 3.86
1728 2591 1.030488 TACGCCCTTCCTCGTCTCTG 61.030 60.000 0.00 0.00 39.79 3.35
1729 2592 0.748729 CTACGCCCTTCCTCGTCTCT 60.749 60.000 0.00 0.00 39.79 3.10
1730 2593 1.728672 CTACGCCCTTCCTCGTCTC 59.271 63.158 0.00 0.00 39.79 3.36
1731 2594 2.416432 GCTACGCCCTTCCTCGTCT 61.416 63.158 0.00 0.00 39.79 4.18
1732 2595 2.104530 GCTACGCCCTTCCTCGTC 59.895 66.667 0.00 0.00 39.79 4.20
1733 2596 2.227089 CTTGCTACGCCCTTCCTCGT 62.227 60.000 0.00 0.00 42.09 4.18
1734 2597 1.519455 CTTGCTACGCCCTTCCTCG 60.519 63.158 0.00 0.00 0.00 4.63
1735 2598 1.815840 GCTTGCTACGCCCTTCCTC 60.816 63.158 0.00 0.00 0.00 3.71
1736 2599 2.269241 GCTTGCTACGCCCTTCCT 59.731 61.111 0.00 0.00 0.00 3.36
1737 2600 3.195698 CGCTTGCTACGCCCTTCC 61.196 66.667 0.00 0.00 0.00 3.46
1738 2601 2.125673 TCGCTTGCTACGCCCTTC 60.126 61.111 0.00 0.00 0.00 3.46
1739 2602 2.434359 GTCGCTTGCTACGCCCTT 60.434 61.111 0.00 0.00 0.00 3.95
1740 2603 4.796231 CGTCGCTTGCTACGCCCT 62.796 66.667 6.73 0.00 31.66 5.19
1741 2604 4.789075 TCGTCGCTTGCTACGCCC 62.789 66.667 13.53 0.00 38.94 6.13
1742 2605 2.377310 TTTCGTCGCTTGCTACGCC 61.377 57.895 13.53 0.00 38.94 5.68
1743 2606 1.225395 GTTTCGTCGCTTGCTACGC 60.225 57.895 13.53 0.00 38.94 4.42
1744 2607 1.055235 CGTTTCGTCGCTTGCTACG 59.945 57.895 12.40 12.40 40.40 3.51
1745 2608 4.999550 CGTTTCGTCGCTTGCTAC 57.000 55.556 0.00 0.00 0.00 3.58
1757 2620 0.601841 TCAACTCCCCGAAGCGTTTC 60.602 55.000 1.33 1.33 0.00 2.78
1758 2621 0.179040 TTCAACTCCCCGAAGCGTTT 60.179 50.000 0.00 0.00 0.00 3.60
1759 2622 0.179040 TTTCAACTCCCCGAAGCGTT 60.179 50.000 0.00 0.00 0.00 4.84
1760 2623 0.179040 TTTTCAACTCCCCGAAGCGT 60.179 50.000 0.00 0.00 0.00 5.07
1761 2624 1.165270 ATTTTCAACTCCCCGAAGCG 58.835 50.000 0.00 0.00 0.00 4.68
1762 2625 3.427638 GCTTATTTTCAACTCCCCGAAGC 60.428 47.826 0.00 0.00 0.00 3.86
1763 2626 3.756434 TGCTTATTTTCAACTCCCCGAAG 59.244 43.478 0.00 0.00 0.00 3.79
1764 2627 3.757270 TGCTTATTTTCAACTCCCCGAA 58.243 40.909 0.00 0.00 0.00 4.30
1765 2628 3.426787 TGCTTATTTTCAACTCCCCGA 57.573 42.857 0.00 0.00 0.00 5.14
1766 2629 5.123227 TCTATGCTTATTTTCAACTCCCCG 58.877 41.667 0.00 0.00 0.00 5.73
1767 2630 6.207614 GGATCTATGCTTATTTTCAACTCCCC 59.792 42.308 0.00 0.00 0.00 4.81
1768 2631 6.073003 CGGATCTATGCTTATTTTCAACTCCC 60.073 42.308 0.00 0.00 0.00 4.30
1769 2632 6.073003 CCGGATCTATGCTTATTTTCAACTCC 60.073 42.308 0.00 0.00 0.00 3.85
1770 2633 6.706270 TCCGGATCTATGCTTATTTTCAACTC 59.294 38.462 0.00 0.00 0.00 3.01
1771 2634 6.591935 TCCGGATCTATGCTTATTTTCAACT 58.408 36.000 0.00 0.00 0.00 3.16
1772 2635 6.706270 TCTCCGGATCTATGCTTATTTTCAAC 59.294 38.462 3.57 0.00 0.00 3.18
1773 2636 6.826668 TCTCCGGATCTATGCTTATTTTCAA 58.173 36.000 3.57 0.00 0.00 2.69
1774 2637 6.419484 TCTCCGGATCTATGCTTATTTTCA 57.581 37.500 3.57 0.00 0.00 2.69
1775 2638 7.065204 GGAATCTCCGGATCTATGCTTATTTTC 59.935 40.741 3.57 0.00 0.00 2.29
1776 2639 6.881602 GGAATCTCCGGATCTATGCTTATTTT 59.118 38.462 3.57 0.00 0.00 1.82
1777 2640 6.410540 GGAATCTCCGGATCTATGCTTATTT 58.589 40.000 3.57 0.00 0.00 1.40
1778 2641 5.104735 GGGAATCTCCGGATCTATGCTTATT 60.105 44.000 3.57 0.00 37.43 1.40
1779 2642 4.407296 GGGAATCTCCGGATCTATGCTTAT 59.593 45.833 3.57 0.00 37.43 1.73
1780 2643 3.769844 GGGAATCTCCGGATCTATGCTTA 59.230 47.826 3.57 0.00 37.43 3.09
1781 2644 2.569404 GGGAATCTCCGGATCTATGCTT 59.431 50.000 3.57 0.00 37.43 3.91
1782 2645 2.183679 GGGAATCTCCGGATCTATGCT 58.816 52.381 3.57 0.00 37.43 3.79
1783 2646 1.902508 TGGGAATCTCCGGATCTATGC 59.097 52.381 3.57 0.00 37.43 3.14
1784 2647 4.623932 TTTGGGAATCTCCGGATCTATG 57.376 45.455 3.57 0.00 37.43 2.23
1785 2648 5.426833 CCTATTTGGGAATCTCCGGATCTAT 59.573 44.000 3.57 0.00 37.43 1.98
1786 2649 4.777896 CCTATTTGGGAATCTCCGGATCTA 59.222 45.833 3.57 0.00 37.43 1.98
1787 2650 3.584848 CCTATTTGGGAATCTCCGGATCT 59.415 47.826 3.57 0.00 37.43 2.75
1788 2651 3.328050 ACCTATTTGGGAATCTCCGGATC 59.672 47.826 3.57 0.00 37.43 3.36
1789 2652 3.327439 ACCTATTTGGGAATCTCCGGAT 58.673 45.455 3.57 0.00 37.43 4.18
1790 2653 2.704065 GACCTATTTGGGAATCTCCGGA 59.296 50.000 2.93 2.93 37.43 5.14
1791 2654 2.438021 TGACCTATTTGGGAATCTCCGG 59.562 50.000 0.00 0.00 37.43 5.14
1792 2655 3.838244 TGACCTATTTGGGAATCTCCG 57.162 47.619 0.00 0.00 37.43 4.63
1793 2656 4.079730 AGGTTGACCTATTTGGGAATCTCC 60.080 45.833 0.00 0.00 46.48 3.71
1794 2657 5.117406 AGGTTGACCTATTTGGGAATCTC 57.883 43.478 0.00 0.00 46.48 2.75
1830 2693 0.332293 TTGCCTGCTCATGGATTCCA 59.668 50.000 8.08 8.08 38.19 3.53
1831 2694 1.030457 CTTGCCTGCTCATGGATTCC 58.970 55.000 0.00 0.00 0.00 3.01
1857 2720 1.686052 CTGCTCCTGAGGGACACTATC 59.314 57.143 0.00 0.00 36.57 2.08
1858 2721 1.007721 ACTGCTCCTGAGGGACACTAT 59.992 52.381 0.00 0.00 36.57 2.12
1859 2722 0.409876 ACTGCTCCTGAGGGACACTA 59.590 55.000 0.00 0.00 36.57 2.74
1860 2723 0.472734 AACTGCTCCTGAGGGACACT 60.473 55.000 0.00 0.00 36.57 3.55
1861 2724 0.398318 AAACTGCTCCTGAGGGACAC 59.602 55.000 0.00 0.00 36.57 3.67
1862 2725 0.397941 CAAACTGCTCCTGAGGGACA 59.602 55.000 0.00 0.00 36.57 4.02
1863 2726 0.687354 TCAAACTGCTCCTGAGGGAC 59.313 55.000 0.00 0.00 36.57 4.46
1864 2727 1.434188 TTCAAACTGCTCCTGAGGGA 58.566 50.000 0.00 0.00 39.70 4.20
1865 2728 2.276732 TTTCAAACTGCTCCTGAGGG 57.723 50.000 0.00 0.00 0.00 4.30
1866 2729 2.094854 GCATTTCAAACTGCTCCTGAGG 60.095 50.000 0.00 0.00 35.49 3.86
1867 2730 2.555325 TGCATTTCAAACTGCTCCTGAG 59.445 45.455 6.63 0.00 39.16 3.35
1868 2731 2.585330 TGCATTTCAAACTGCTCCTGA 58.415 42.857 6.63 0.00 39.16 3.86
1869 2732 3.314553 CTTGCATTTCAAACTGCTCCTG 58.685 45.455 6.63 0.00 39.16 3.86
1874 2737 1.453148 GACGCTTGCATTTCAAACTGC 59.547 47.619 0.00 0.00 38.87 4.40
1891 2754 5.723492 TGATCAAACATCTATGCAAGACG 57.277 39.130 0.00 0.00 36.93 4.18
1922 2788 5.009710 CGCATTACTAGGACAGGTGATTCTA 59.990 44.000 0.00 0.00 0.00 2.10
1924 2790 4.051922 CGCATTACTAGGACAGGTGATTC 58.948 47.826 0.00 0.00 0.00 2.52
1933 2799 2.034812 ACTGCTAGCGCATTACTAGGAC 59.965 50.000 11.47 0.00 46.74 3.85
1990 2857 1.918262 TGAGCCCCATCAGTTCTTCAT 59.082 47.619 0.00 0.00 0.00 2.57
2092 3402 0.390866 ATGAAGCTGAGAGCACCACG 60.391 55.000 0.00 0.00 45.56 4.94
2113 3455 9.480053 ACACAAATGCATAAGGAATATAAATGC 57.520 29.630 0.00 0.00 42.52 3.56
2150 3492 5.243730 TGTTTGAATTCCTCCAACCAGAATC 59.756 40.000 2.27 0.00 30.28 2.52
2157 3499 4.320608 TGCTTGTTTGAATTCCTCCAAC 57.679 40.909 2.27 1.97 31.69 3.77
2158 3500 5.549742 AATGCTTGTTTGAATTCCTCCAA 57.450 34.783 2.27 2.21 0.00 3.53
2170 3512 8.504812 AACCATTTCAAACTTAATGCTTGTTT 57.495 26.923 0.00 0.00 34.69 2.83
2176 3519 7.540745 ACGATGTAACCATTTCAAACTTAATGC 59.459 33.333 0.00 0.00 31.85 3.56
2185 3528 8.554835 TTTCATCTACGATGTAACCATTTCAA 57.445 30.769 4.01 0.00 0.00 2.69
2230 3573 3.058155 CGATAGATCAATCTCGGTTCCGT 60.058 47.826 11.04 0.00 38.32 4.69
2264 3607 4.287067 AGAATCTTTGGTTGGTCTGCTCTA 59.713 41.667 0.00 0.00 0.00 2.43
2296 3639 5.799213 AGCTAGTGTCAAGTTCAGCTAAAT 58.201 37.500 0.00 0.00 37.58 1.40
2354 3697 3.056821 GGAAATTCGGTCAAGGAAAAGGG 60.057 47.826 0.00 0.00 0.00 3.95
2409 3753 9.987272 CAATGTAGATATTGATAGTTCCTGTGA 57.013 33.333 0.00 0.00 39.79 3.58
2496 3842 0.618458 ACAGCTAGAAAATGCCCCGA 59.382 50.000 0.00 0.00 0.00 5.14
2498 3844 1.839424 ACACAGCTAGAAAATGCCCC 58.161 50.000 0.00 0.00 0.00 5.80
2501 3847 6.182039 TCAACATACACAGCTAGAAAATGC 57.818 37.500 0.00 0.00 0.00 3.56
2503 3849 7.880195 AGAGTTCAACATACACAGCTAGAAAAT 59.120 33.333 0.00 0.00 0.00 1.82
2509 3855 5.237815 CCAAGAGTTCAACATACACAGCTA 58.762 41.667 0.00 0.00 0.00 3.32
2518 3864 4.580580 GTGTTCTTCCCAAGAGTTCAACAT 59.419 41.667 0.00 0.00 39.03 2.71
2526 3872 2.260844 TGCAGTGTTCTTCCCAAGAG 57.739 50.000 0.00 0.00 39.03 2.85
2535 3881 1.605710 GCACAACAGATGCAGTGTTCT 59.394 47.619 13.03 0.00 42.88 3.01
2553 3899 3.772853 AACTGGAGGCGCAAGTGCA 62.773 57.895 10.83 3.43 42.21 4.57
2682 4033 6.174049 GTGACCTGCCTAAAATCTTAAGAGT 58.826 40.000 11.53 5.33 0.00 3.24
2687 4038 4.843728 CAGGTGACCTGCCTAAAATCTTA 58.156 43.478 20.01 0.00 45.13 2.10
2703 4067 2.739609 CGCAATATCTCTGTGCAGGTGA 60.740 50.000 0.00 0.00 38.19 4.02
2712 4076 6.423001 TCTGAATCAACATCGCAATATCTCTG 59.577 38.462 0.00 0.00 0.00 3.35
2716 4080 7.042187 ACTCTTCTGAATCAACATCGCAATATC 60.042 37.037 0.00 0.00 0.00 1.63
2717 4081 6.765036 ACTCTTCTGAATCAACATCGCAATAT 59.235 34.615 0.00 0.00 0.00 1.28
2739 4103 2.152016 GCCCTACCACTGAAACAACTC 58.848 52.381 0.00 0.00 0.00 3.01
2758 4122 1.968540 GCCCTATCTGATTGCCGGC 60.969 63.158 22.73 22.73 0.00 6.13
2762 4126 0.957362 GCCTTGCCCTATCTGATTGC 59.043 55.000 0.00 0.00 0.00 3.56
2763 4127 1.952296 GTGCCTTGCCCTATCTGATTG 59.048 52.381 0.00 0.00 0.00 2.67
2797 4161 1.761500 AACCCTACGGCGGAACAACT 61.761 55.000 13.24 0.00 0.00 3.16
2798 4162 0.886043 AAACCCTACGGCGGAACAAC 60.886 55.000 13.24 0.00 0.00 3.32
2802 4166 1.555477 ATCCAAACCCTACGGCGGAA 61.555 55.000 13.24 0.00 31.06 4.30
2821 4185 0.621609 AATAGTGGCGGCAGGGTTTA 59.378 50.000 13.91 0.53 0.00 2.01
2841 4205 2.112297 TGGCGAACTGGTCCAACC 59.888 61.111 0.00 0.00 39.22 3.77
2842 4206 2.258726 GGTGGCGAACTGGTCCAAC 61.259 63.158 0.00 0.00 0.00 3.77
2843 4207 2.112297 GGTGGCGAACTGGTCCAA 59.888 61.111 0.00 0.00 0.00 3.53
2844 4208 4.308458 CGGTGGCGAACTGGTCCA 62.308 66.667 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.