Multiple sequence alignment - TraesCS3B01G065400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G065400 chr3B 100.000 1453 0 0 1 1453 39156630 39155178 0 2684
1 TraesCS3B01G065400 chr3B 94.498 1454 74 4 1 1453 441031156 441029708 0 2237
2 TraesCS3B01G065400 chr3B 100.000 568 0 0 1709 2276 39154922 39154355 0 1050
3 TraesCS3B01G065400 chr5B 95.120 1455 65 5 1 1453 122800523 122801973 0 2289
4 TraesCS3B01G065400 chr6B 94.918 1456 68 6 1 1453 593121554 593123006 0 2274
5 TraesCS3B01G065400 chr6B 94.838 1453 73 2 1 1453 533238319 533239769 0 2266
6 TraesCS3B01G065400 chr6B 94.766 1452 71 5 1 1451 568678611 568677164 0 2255
7 TraesCS3B01G065400 chr4B 94.715 1457 69 5 1 1453 567852491 567851039 0 2257
8 TraesCS3B01G065400 chr2B 94.624 1451 76 2 1 1451 752245792 752244344 0 2246
9 TraesCS3B01G065400 chr1B 94.624 1451 74 3 1 1451 518058717 518057271 0 2244
10 TraesCS3B01G065400 chr7B 94.429 1454 75 4 1 1452 115033328 115031879 0 2231
11 TraesCS3B01G065400 chr7B 95.599 568 25 0 1709 2276 721871035 721870468 0 911
12 TraesCS3B01G065400 chr7D 95.775 568 24 0 1709 2276 247007847 247008414 0 917
13 TraesCS3B01G065400 chr7D 95.614 570 21 3 1709 2276 452496936 452496369 0 911
14 TraesCS3B01G065400 chr3D 95.775 568 24 0 1709 2276 511389937 511390504 0 917
15 TraesCS3B01G065400 chr3D 95.599 568 25 0 1709 2276 264202341 264202908 0 911
16 TraesCS3B01G065400 chr6D 95.599 568 25 0 1709 2276 68406186 68406753 0 911
17 TraesCS3B01G065400 chr5D 95.599 568 25 0 1709 2276 370872882 370872315 0 911
18 TraesCS3B01G065400 chr4D 95.599 568 24 1 1709 2276 414872370 414872936 0 909
19 TraesCS3B01G065400 chr4D 95.423 568 26 0 1709 2276 111195561 111196128 0 905


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G065400 chr3B 39154355 39156630 2275 True 1867 2684 100.000 1 2276 2 chr3B.!!$R2 2275
1 TraesCS3B01G065400 chr3B 441029708 441031156 1448 True 2237 2237 94.498 1 1453 1 chr3B.!!$R1 1452
2 TraesCS3B01G065400 chr5B 122800523 122801973 1450 False 2289 2289 95.120 1 1453 1 chr5B.!!$F1 1452
3 TraesCS3B01G065400 chr6B 593121554 593123006 1452 False 2274 2274 94.918 1 1453 1 chr6B.!!$F2 1452
4 TraesCS3B01G065400 chr6B 533238319 533239769 1450 False 2266 2266 94.838 1 1453 1 chr6B.!!$F1 1452
5 TraesCS3B01G065400 chr6B 568677164 568678611 1447 True 2255 2255 94.766 1 1451 1 chr6B.!!$R1 1450
6 TraesCS3B01G065400 chr4B 567851039 567852491 1452 True 2257 2257 94.715 1 1453 1 chr4B.!!$R1 1452
7 TraesCS3B01G065400 chr2B 752244344 752245792 1448 True 2246 2246 94.624 1 1451 1 chr2B.!!$R1 1450
8 TraesCS3B01G065400 chr1B 518057271 518058717 1446 True 2244 2244 94.624 1 1451 1 chr1B.!!$R1 1450
9 TraesCS3B01G065400 chr7B 115031879 115033328 1449 True 2231 2231 94.429 1 1452 1 chr7B.!!$R1 1451
10 TraesCS3B01G065400 chr7B 721870468 721871035 567 True 911 911 95.599 1709 2276 1 chr7B.!!$R2 567
11 TraesCS3B01G065400 chr7D 247007847 247008414 567 False 917 917 95.775 1709 2276 1 chr7D.!!$F1 567
12 TraesCS3B01G065400 chr7D 452496369 452496936 567 True 911 911 95.614 1709 2276 1 chr7D.!!$R1 567
13 TraesCS3B01G065400 chr3D 511389937 511390504 567 False 917 917 95.775 1709 2276 1 chr3D.!!$F2 567
14 TraesCS3B01G065400 chr3D 264202341 264202908 567 False 911 911 95.599 1709 2276 1 chr3D.!!$F1 567
15 TraesCS3B01G065400 chr6D 68406186 68406753 567 False 911 911 95.599 1709 2276 1 chr6D.!!$F1 567
16 TraesCS3B01G065400 chr5D 370872315 370872882 567 True 911 911 95.599 1709 2276 1 chr5D.!!$R1 567
17 TraesCS3B01G065400 chr4D 414872370 414872936 566 False 909 909 95.599 1709 2276 1 chr4D.!!$F2 567
18 TraesCS3B01G065400 chr4D 111195561 111196128 567 False 905 905 95.423 1709 2276 1 chr4D.!!$F1 567

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
994 999 0.032678 ACTTCGAGGCCTATCGCATG 59.967 55.0 4.42 2.53 42.43 4.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2089 2094 1.45973 GGCCTAGGAAGGGGACGAT 60.46 63.158 14.75 0.0 43.87 3.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
88 89 1.137872 GACTGTACATGGAGAGCCTGG 59.862 57.143 1.00 0.00 34.31 4.45
199 204 1.276989 GACCCACCGGTTGTATCTTCA 59.723 52.381 2.97 0.00 44.88 3.02
411 416 3.239449 TCAACCTCTGTTCTTGCTCCTA 58.761 45.455 0.00 0.00 30.42 2.94
442 447 3.353836 GCACCGCGGATGTGTTGT 61.354 61.111 35.90 2.60 36.11 3.32
623 628 3.249189 ACAGTGGGGACGCACCAT 61.249 61.111 14.78 2.15 45.56 3.55
716 721 1.440708 ACTGTACGTGGAGAGTCTCG 58.559 55.000 13.97 6.14 0.00 4.04
726 731 3.462678 GAGTCTCGGCTGGGTCCC 61.463 72.222 0.00 0.00 0.00 4.46
727 732 3.966930 GAGTCTCGGCTGGGTCCCT 62.967 68.421 10.00 0.00 0.00 4.20
729 734 3.992641 TCTCGGCTGGGTCCCTGA 61.993 66.667 18.68 5.85 0.00 3.86
745 750 1.965754 CTGACTGCTGGAGCTACCCC 61.966 65.000 0.00 0.00 42.66 4.95
746 751 1.687493 GACTGCTGGAGCTACCCCT 60.687 63.158 0.00 0.00 42.66 4.79
750 755 0.621571 TGCTGGAGCTACCCCTCAAT 60.622 55.000 0.00 0.00 42.66 2.57
790 795 4.752879 ATGGTTGGACGTCGCCGG 62.753 66.667 9.92 0.00 38.78 6.13
799 804 3.751246 CGTCGCCGGAACCAGGTA 61.751 66.667 5.05 0.00 0.00 3.08
800 805 2.897972 GTCGCCGGAACCAGGTAT 59.102 61.111 5.05 0.00 0.00 2.73
801 806 1.520787 GTCGCCGGAACCAGGTATG 60.521 63.158 5.05 0.00 0.00 2.39
802 807 1.683025 TCGCCGGAACCAGGTATGA 60.683 57.895 5.05 0.00 0.00 2.15
803 808 1.046472 TCGCCGGAACCAGGTATGAT 61.046 55.000 5.05 0.00 0.00 2.45
804 809 0.600255 CGCCGGAACCAGGTATGATC 60.600 60.000 5.05 0.00 0.00 2.92
805 810 0.468226 GCCGGAACCAGGTATGATCA 59.532 55.000 5.05 0.00 0.00 2.92
806 811 1.134220 GCCGGAACCAGGTATGATCAA 60.134 52.381 5.05 0.00 0.00 2.57
807 812 2.838736 CCGGAACCAGGTATGATCAAG 58.161 52.381 0.00 0.00 0.00 3.02
808 813 2.434336 CCGGAACCAGGTATGATCAAGA 59.566 50.000 0.00 0.00 0.00 3.02
809 814 3.071602 CCGGAACCAGGTATGATCAAGAT 59.928 47.826 0.00 0.00 0.00 2.40
810 815 4.444876 CCGGAACCAGGTATGATCAAGATT 60.445 45.833 0.00 0.00 0.00 2.40
811 816 5.126067 CGGAACCAGGTATGATCAAGATTT 58.874 41.667 0.00 0.00 0.00 2.17
812 817 5.237344 CGGAACCAGGTATGATCAAGATTTC 59.763 44.000 0.00 0.00 0.00 2.17
813 818 6.122277 GGAACCAGGTATGATCAAGATTTCA 58.878 40.000 0.00 0.00 0.00 2.69
814 819 6.774656 GGAACCAGGTATGATCAAGATTTCAT 59.225 38.462 0.00 0.00 36.57 2.57
815 820 7.255381 GGAACCAGGTATGATCAAGATTTCATG 60.255 40.741 0.00 0.00 34.52 3.07
816 821 6.666678 ACCAGGTATGATCAAGATTTCATGT 58.333 36.000 0.00 0.00 34.52 3.21
817 822 6.544931 ACCAGGTATGATCAAGATTTCATGTG 59.455 38.462 0.00 0.00 34.52 3.21
818 823 6.769341 CCAGGTATGATCAAGATTTCATGTGA 59.231 38.462 0.00 0.00 34.52 3.58
819 824 7.447545 CCAGGTATGATCAAGATTTCATGTGAT 59.552 37.037 0.00 0.00 34.52 3.06
820 825 8.290325 CAGGTATGATCAAGATTTCATGTGATG 58.710 37.037 0.00 0.00 34.52 3.07
821 826 7.447545 AGGTATGATCAAGATTTCATGTGATGG 59.552 37.037 0.00 0.00 34.52 3.51
822 827 7.446319 GGTATGATCAAGATTTCATGTGATGGA 59.554 37.037 0.00 0.00 34.52 3.41
823 828 6.937436 TGATCAAGATTTCATGTGATGGAG 57.063 37.500 0.00 0.00 30.94 3.86
824 829 5.298527 TGATCAAGATTTCATGTGATGGAGC 59.701 40.000 0.00 0.00 30.94 4.70
825 830 4.591929 TCAAGATTTCATGTGATGGAGCA 58.408 39.130 0.00 0.00 0.00 4.26
826 831 4.397103 TCAAGATTTCATGTGATGGAGCAC 59.603 41.667 0.00 0.00 39.22 4.40
827 832 4.232188 AGATTTCATGTGATGGAGCACT 57.768 40.909 0.00 0.00 39.49 4.40
828 833 4.197750 AGATTTCATGTGATGGAGCACTC 58.802 43.478 0.00 0.00 39.49 3.51
829 834 3.421919 TTTCATGTGATGGAGCACTCA 57.578 42.857 0.00 0.00 39.49 3.41
830 835 3.421919 TTCATGTGATGGAGCACTCAA 57.578 42.857 0.00 0.00 39.49 3.02
831 836 3.639672 TCATGTGATGGAGCACTCAAT 57.360 42.857 0.00 0.00 39.49 2.57
832 837 3.275999 TCATGTGATGGAGCACTCAATG 58.724 45.455 0.00 0.00 39.49 2.82
833 838 2.865119 TGTGATGGAGCACTCAATGT 57.135 45.000 0.00 0.00 39.49 2.71
835 840 1.741706 GTGATGGAGCACTCAATGTGG 59.258 52.381 0.00 0.00 46.27 4.17
836 841 0.737219 GATGGAGCACTCAATGTGGC 59.263 55.000 0.00 0.00 46.27 5.01
837 842 0.038599 ATGGAGCACTCAATGTGGCA 59.961 50.000 0.00 0.00 46.27 4.92
838 843 0.607217 TGGAGCACTCAATGTGGCAG 60.607 55.000 0.00 0.00 46.27 4.85
839 844 0.321919 GGAGCACTCAATGTGGCAGA 60.322 55.000 0.00 0.00 46.27 4.26
840 845 1.527034 GAGCACTCAATGTGGCAGAA 58.473 50.000 0.00 0.00 46.27 3.02
841 846 1.467734 GAGCACTCAATGTGGCAGAAG 59.532 52.381 0.00 0.00 46.27 2.85
842 847 0.524862 GCACTCAATGTGGCAGAAGG 59.475 55.000 0.00 0.00 46.27 3.46
843 848 1.901591 CACTCAATGTGGCAGAAGGT 58.098 50.000 0.00 0.00 42.68 3.50
844 849 1.808945 CACTCAATGTGGCAGAAGGTC 59.191 52.381 0.00 0.00 42.68 3.85
845 850 1.081892 CTCAATGTGGCAGAAGGTCG 58.918 55.000 0.00 0.00 0.00 4.79
846 851 0.684535 TCAATGTGGCAGAAGGTCGA 59.315 50.000 0.00 0.00 0.00 4.20
847 852 1.071542 TCAATGTGGCAGAAGGTCGAA 59.928 47.619 0.00 0.00 0.00 3.71
848 853 1.466167 CAATGTGGCAGAAGGTCGAAG 59.534 52.381 0.00 0.00 0.00 3.79
849 854 0.976641 ATGTGGCAGAAGGTCGAAGA 59.023 50.000 0.00 0.00 0.00 2.87
850 855 0.318441 TGTGGCAGAAGGTCGAAGAG 59.682 55.000 0.00 0.00 36.95 2.85
851 856 0.390472 GTGGCAGAAGGTCGAAGAGG 60.390 60.000 0.00 0.00 36.95 3.69
852 857 0.832135 TGGCAGAAGGTCGAAGAGGT 60.832 55.000 0.00 0.00 36.95 3.85
853 858 0.390472 GGCAGAAGGTCGAAGAGGTG 60.390 60.000 0.00 0.00 36.95 4.00
854 859 1.016653 GCAGAAGGTCGAAGAGGTGC 61.017 60.000 0.00 0.00 36.95 5.01
855 860 0.734253 CAGAAGGTCGAAGAGGTGCG 60.734 60.000 0.00 0.00 36.95 5.34
856 861 1.446272 GAAGGTCGAAGAGGTGCGG 60.446 63.158 0.00 0.00 36.95 5.69
857 862 2.837371 GAAGGTCGAAGAGGTGCGGG 62.837 65.000 0.00 0.00 36.95 6.13
858 863 3.692406 GGTCGAAGAGGTGCGGGT 61.692 66.667 0.00 0.00 36.95 5.28
859 864 2.432628 GTCGAAGAGGTGCGGGTG 60.433 66.667 0.00 0.00 36.95 4.61
860 865 3.691342 TCGAAGAGGTGCGGGTGG 61.691 66.667 0.00 0.00 0.00 4.61
886 891 3.028969 GGTACGTATCCGCGCTCT 58.971 61.111 5.56 0.00 37.70 4.09
887 892 1.358046 GGTACGTATCCGCGCTCTT 59.642 57.895 5.56 0.00 37.70 2.85
888 893 0.933509 GGTACGTATCCGCGCTCTTG 60.934 60.000 5.56 0.00 37.70 3.02
889 894 0.933509 GTACGTATCCGCGCTCTTGG 60.934 60.000 5.56 0.00 37.70 3.61
890 895 2.067091 TACGTATCCGCGCTCTTGGG 62.067 60.000 5.56 0.00 37.70 4.12
891 896 2.499685 GTATCCGCGCTCTTGGGT 59.500 61.111 5.56 0.00 0.00 4.51
892 897 1.883084 GTATCCGCGCTCTTGGGTG 60.883 63.158 5.56 0.00 36.55 4.61
893 898 3.733344 TATCCGCGCTCTTGGGTGC 62.733 63.158 5.56 0.00 39.09 5.01
896 901 4.093952 CGCGCTCTTGGGTGCTTG 62.094 66.667 5.56 0.00 40.16 4.01
897 902 3.741476 GCGCTCTTGGGTGCTTGG 61.741 66.667 0.00 0.00 39.35 3.61
898 903 2.281761 CGCTCTTGGGTGCTTGGT 60.282 61.111 0.00 0.00 0.00 3.67
899 904 2.620112 CGCTCTTGGGTGCTTGGTG 61.620 63.158 0.00 0.00 0.00 4.17
900 905 2.924105 GCTCTTGGGTGCTTGGTGC 61.924 63.158 0.00 0.00 43.25 5.01
911 916 1.856802 GCTTGGTGCAAGACTTTTGG 58.143 50.000 0.00 0.00 43.42 3.28
912 917 1.136891 GCTTGGTGCAAGACTTTTGGT 59.863 47.619 0.00 0.00 43.42 3.67
913 918 2.813061 CTTGGTGCAAGACTTTTGGTG 58.187 47.619 0.00 0.00 43.42 4.17
914 919 2.136298 TGGTGCAAGACTTTTGGTGA 57.864 45.000 0.00 0.00 0.00 4.02
915 920 1.748493 TGGTGCAAGACTTTTGGTGAC 59.252 47.619 0.00 0.00 0.00 3.67
916 921 1.748493 GGTGCAAGACTTTTGGTGACA 59.252 47.619 0.00 0.00 39.83 3.58
917 922 2.362077 GGTGCAAGACTTTTGGTGACAT 59.638 45.455 0.00 0.00 42.32 3.06
918 923 3.568007 GGTGCAAGACTTTTGGTGACATA 59.432 43.478 0.00 0.00 42.32 2.29
919 924 4.218417 GGTGCAAGACTTTTGGTGACATAT 59.782 41.667 0.00 0.00 42.32 1.78
920 925 5.393962 GTGCAAGACTTTTGGTGACATATC 58.606 41.667 0.00 0.00 42.32 1.63
921 926 4.458989 TGCAAGACTTTTGGTGACATATCC 59.541 41.667 0.00 0.00 42.32 2.59
922 927 4.437390 GCAAGACTTTTGGTGACATATCCG 60.437 45.833 0.00 0.00 42.32 4.18
923 928 4.819105 AGACTTTTGGTGACATATCCGA 57.181 40.909 0.00 0.00 42.32 4.55
924 929 5.359194 AGACTTTTGGTGACATATCCGAT 57.641 39.130 0.00 0.00 42.32 4.18
925 930 5.360591 AGACTTTTGGTGACATATCCGATC 58.639 41.667 0.00 0.00 42.32 3.69
926 931 4.451900 ACTTTTGGTGACATATCCGATCC 58.548 43.478 0.00 0.00 42.32 3.36
927 932 4.164221 ACTTTTGGTGACATATCCGATCCT 59.836 41.667 0.00 0.00 42.32 3.24
928 933 4.336889 TTTGGTGACATATCCGATCCTC 57.663 45.455 0.00 0.00 42.32 3.71
929 934 3.244887 TGGTGACATATCCGATCCTCT 57.755 47.619 0.00 0.00 33.40 3.69
930 935 3.576861 TGGTGACATATCCGATCCTCTT 58.423 45.455 0.00 0.00 33.40 2.85
931 936 4.736473 TGGTGACATATCCGATCCTCTTA 58.264 43.478 0.00 0.00 33.40 2.10
932 937 5.333581 TGGTGACATATCCGATCCTCTTAT 58.666 41.667 0.00 0.00 33.40 1.73
933 938 6.490492 TGGTGACATATCCGATCCTCTTATA 58.510 40.000 0.00 0.00 33.40 0.98
934 939 6.951778 TGGTGACATATCCGATCCTCTTATAA 59.048 38.462 0.00 0.00 33.40 0.98
935 940 7.619698 TGGTGACATATCCGATCCTCTTATAAT 59.380 37.037 0.00 0.00 33.40 1.28
936 941 7.923344 GGTGACATATCCGATCCTCTTATAATG 59.077 40.741 0.00 0.00 0.00 1.90
937 942 7.923344 GTGACATATCCGATCCTCTTATAATGG 59.077 40.741 0.00 0.00 0.00 3.16
938 943 7.839200 TGACATATCCGATCCTCTTATAATGGA 59.161 37.037 9.04 9.04 0.00 3.41
939 944 8.609617 ACATATCCGATCCTCTTATAATGGAA 57.390 34.615 10.25 0.00 33.20 3.53
940 945 8.700051 ACATATCCGATCCTCTTATAATGGAAG 58.300 37.037 10.25 8.17 33.20 3.46
941 946 5.407407 TCCGATCCTCTTATAATGGAAGC 57.593 43.478 10.25 6.29 33.20 3.86
942 947 4.223032 TCCGATCCTCTTATAATGGAAGCC 59.777 45.833 10.25 0.00 33.20 4.35
943 948 4.508662 CGATCCTCTTATAATGGAAGCCC 58.491 47.826 10.25 0.00 33.20 5.19
944 949 4.223923 CGATCCTCTTATAATGGAAGCCCT 59.776 45.833 10.25 0.00 33.20 5.19
945 950 5.422331 CGATCCTCTTATAATGGAAGCCCTA 59.578 44.000 10.25 0.00 33.20 3.53
946 951 6.098982 CGATCCTCTTATAATGGAAGCCCTAT 59.901 42.308 10.25 0.00 33.20 2.57
947 952 6.875972 TCCTCTTATAATGGAAGCCCTATC 57.124 41.667 5.24 0.00 0.00 2.08
948 953 6.331032 TCCTCTTATAATGGAAGCCCTATCA 58.669 40.000 5.24 0.00 0.00 2.15
949 954 6.792473 TCCTCTTATAATGGAAGCCCTATCAA 59.208 38.462 5.24 0.00 0.00 2.57
950 955 7.462328 TCCTCTTATAATGGAAGCCCTATCAAT 59.538 37.037 5.24 0.00 0.00 2.57
951 956 7.555554 CCTCTTATAATGGAAGCCCTATCAATG 59.444 40.741 0.00 0.00 0.00 2.82
952 957 6.886459 TCTTATAATGGAAGCCCTATCAATGC 59.114 38.462 0.00 0.00 0.00 3.56
953 958 1.901591 ATGGAAGCCCTATCAATGCG 58.098 50.000 0.00 0.00 0.00 4.73
954 959 0.836606 TGGAAGCCCTATCAATGCGA 59.163 50.000 0.00 0.00 0.00 5.10
955 960 1.202687 TGGAAGCCCTATCAATGCGAG 60.203 52.381 0.00 0.00 0.00 5.03
956 961 1.070758 GGAAGCCCTATCAATGCGAGA 59.929 52.381 0.00 0.00 0.00 4.04
957 962 2.485479 GGAAGCCCTATCAATGCGAGAA 60.485 50.000 0.00 0.00 0.00 2.87
958 963 2.540265 AGCCCTATCAATGCGAGAAG 57.460 50.000 0.00 0.00 0.00 2.85
959 964 1.071385 AGCCCTATCAATGCGAGAAGG 59.929 52.381 0.00 0.00 32.68 3.46
960 965 1.070758 GCCCTATCAATGCGAGAAGGA 59.929 52.381 0.00 0.00 34.11 3.36
961 966 2.485479 GCCCTATCAATGCGAGAAGGAA 60.485 50.000 0.00 0.00 34.11 3.36
962 967 3.134458 CCCTATCAATGCGAGAAGGAAC 58.866 50.000 0.00 0.00 34.11 3.62
963 968 2.797156 CCTATCAATGCGAGAAGGAACG 59.203 50.000 0.00 0.00 34.11 3.95
971 976 1.674908 CGAGAAGGAACGCTTTTTGC 58.325 50.000 0.00 0.00 38.57 3.68
972 977 1.002900 CGAGAAGGAACGCTTTTTGCA 60.003 47.619 0.00 0.00 43.06 4.08
973 978 2.540769 CGAGAAGGAACGCTTTTTGCAA 60.541 45.455 0.00 0.00 43.06 4.08
974 979 3.443976 GAGAAGGAACGCTTTTTGCAAA 58.556 40.909 8.05 8.05 43.06 3.68
975 980 3.855858 AGAAGGAACGCTTTTTGCAAAA 58.144 36.364 20.46 20.46 43.06 2.44
976 981 3.616821 AGAAGGAACGCTTTTTGCAAAAC 59.383 39.130 23.79 12.65 43.06 2.43
977 982 3.245518 AGGAACGCTTTTTGCAAAACT 57.754 38.095 23.79 12.83 43.06 2.66
978 983 3.595173 AGGAACGCTTTTTGCAAAACTT 58.405 36.364 23.79 12.44 43.06 2.66
979 984 3.616821 AGGAACGCTTTTTGCAAAACTTC 59.383 39.130 23.79 18.80 43.06 3.01
980 985 3.541322 GGAACGCTTTTTGCAAAACTTCG 60.541 43.478 23.79 24.66 43.06 3.79
981 986 2.869897 ACGCTTTTTGCAAAACTTCGA 58.130 38.095 29.77 16.00 43.06 3.71
982 987 2.851824 ACGCTTTTTGCAAAACTTCGAG 59.148 40.909 29.77 22.76 43.06 4.04
983 988 2.216263 CGCTTTTTGCAAAACTTCGAGG 59.784 45.455 23.79 4.15 43.06 4.63
984 989 2.033747 GCTTTTTGCAAAACTTCGAGGC 60.034 45.455 23.79 10.58 42.31 4.70
985 990 2.217429 TTTTGCAAAACTTCGAGGCC 57.783 45.000 20.46 0.00 0.00 5.19
986 991 1.398692 TTTGCAAAACTTCGAGGCCT 58.601 45.000 3.86 3.86 0.00 5.19
987 992 2.264005 TTGCAAAACTTCGAGGCCTA 57.736 45.000 4.42 0.00 0.00 3.93
988 993 2.489938 TGCAAAACTTCGAGGCCTAT 57.510 45.000 4.42 0.00 0.00 2.57
989 994 2.356135 TGCAAAACTTCGAGGCCTATC 58.644 47.619 4.42 0.00 0.00 2.08
990 995 1.327764 GCAAAACTTCGAGGCCTATCG 59.672 52.381 4.42 6.66 44.07 2.92
991 996 1.327764 CAAAACTTCGAGGCCTATCGC 59.672 52.381 4.42 0.00 42.43 4.58
992 997 0.535335 AAACTTCGAGGCCTATCGCA 59.465 50.000 4.42 0.00 42.43 5.10
993 998 0.753262 AACTTCGAGGCCTATCGCAT 59.247 50.000 4.42 0.00 42.43 4.73
994 999 0.032678 ACTTCGAGGCCTATCGCATG 59.967 55.000 4.42 2.53 42.43 4.06
995 1000 0.032678 CTTCGAGGCCTATCGCATGT 59.967 55.000 4.42 0.00 42.43 3.21
996 1001 0.249447 TTCGAGGCCTATCGCATGTG 60.249 55.000 4.42 0.00 42.43 3.21
997 1002 1.106944 TCGAGGCCTATCGCATGTGA 61.107 55.000 12.12 12.12 42.43 3.58
998 1003 0.037882 CGAGGCCTATCGCATGTGAT 60.038 55.000 24.23 24.23 40.31 3.06
999 1004 1.202348 CGAGGCCTATCGCATGTGATA 59.798 52.381 23.90 23.90 40.31 2.15
1000 1005 2.352715 CGAGGCCTATCGCATGTGATAA 60.353 50.000 25.03 12.36 40.31 1.75
1001 1006 3.677148 CGAGGCCTATCGCATGTGATAAT 60.677 47.826 25.03 13.96 40.31 1.28
1002 1007 3.603532 AGGCCTATCGCATGTGATAATG 58.396 45.455 25.03 20.07 40.31 1.90
1003 1008 2.679837 GGCCTATCGCATGTGATAATGG 59.320 50.000 25.03 23.28 40.31 3.16
1004 1009 3.599343 GCCTATCGCATGTGATAATGGA 58.401 45.455 26.89 11.88 37.47 3.41
1005 1010 3.620374 GCCTATCGCATGTGATAATGGAG 59.380 47.826 26.89 18.52 37.47 3.86
1006 1011 4.621510 GCCTATCGCATGTGATAATGGAGA 60.622 45.833 26.89 10.72 37.47 3.71
1007 1012 4.867047 CCTATCGCATGTGATAATGGAGAC 59.133 45.833 25.03 0.00 30.78 3.36
1008 1013 4.613925 ATCGCATGTGATAATGGAGACT 57.386 40.909 20.05 0.00 0.00 3.24
1009 1014 3.721035 TCGCATGTGATAATGGAGACTG 58.279 45.455 4.45 0.00 0.00 3.51
1010 1015 3.384467 TCGCATGTGATAATGGAGACTGA 59.616 43.478 4.45 0.00 0.00 3.41
1011 1016 3.492383 CGCATGTGATAATGGAGACTGAC 59.508 47.826 0.00 0.00 0.00 3.51
1012 1017 4.701765 GCATGTGATAATGGAGACTGACT 58.298 43.478 0.00 0.00 0.00 3.41
1013 1018 4.510711 GCATGTGATAATGGAGACTGACTG 59.489 45.833 0.00 0.00 0.00 3.51
1014 1019 5.668471 CATGTGATAATGGAGACTGACTGT 58.332 41.667 0.00 0.00 0.00 3.55
1015 1020 5.330455 TGTGATAATGGAGACTGACTGTC 57.670 43.478 0.00 0.00 45.67 3.51
1027 1032 2.953020 CTGACTGTCAGGAGTTAGTGC 58.047 52.381 26.36 0.00 40.71 4.40
1028 1033 2.297315 CTGACTGTCAGGAGTTAGTGCA 59.703 50.000 26.36 0.00 40.71 4.57
1029 1034 2.698274 TGACTGTCAGGAGTTAGTGCAA 59.302 45.455 6.36 0.00 0.00 4.08
1030 1035 3.060602 GACTGTCAGGAGTTAGTGCAAC 58.939 50.000 4.53 0.00 37.41 4.17
1031 1036 7.466670 CTGACTGTCAGGAGTTAGTGCAACT 62.467 48.000 26.36 0.00 45.34 3.16
1043 1048 0.443869 GTGCAACTCTGGCATACACG 59.556 55.000 0.00 0.00 44.11 4.49
1044 1049 1.298157 TGCAACTCTGGCATACACGC 61.298 55.000 0.00 0.00 36.11 5.34
1053 1058 2.539003 GCATACACGCCACAACTCA 58.461 52.632 0.00 0.00 0.00 3.41
1054 1059 0.165944 GCATACACGCCACAACTCAC 59.834 55.000 0.00 0.00 0.00 3.51
1055 1060 0.438445 CATACACGCCACAACTCACG 59.562 55.000 0.00 0.00 0.00 4.35
1056 1061 0.032952 ATACACGCCACAACTCACGT 59.967 50.000 0.00 0.00 39.78 4.49
1057 1062 0.179105 TACACGCCACAACTCACGTT 60.179 50.000 0.00 0.00 36.45 3.99
1058 1063 1.275657 CACGCCACAACTCACGTTC 59.724 57.895 0.00 0.00 36.45 3.95
1059 1064 2.235016 ACGCCACAACTCACGTTCG 61.235 57.895 0.00 0.00 34.62 3.95
1060 1065 2.935955 GCCACAACTCACGTTCGG 59.064 61.111 0.00 0.00 0.00 4.30
1061 1066 1.885850 GCCACAACTCACGTTCGGT 60.886 57.895 0.00 0.00 0.00 4.69
1062 1067 1.433837 GCCACAACTCACGTTCGGTT 61.434 55.000 0.00 0.00 0.00 4.44
1063 1068 0.303493 CCACAACTCACGTTCGGTTG 59.697 55.000 17.76 17.76 43.84 3.77
1064 1069 3.446507 ACAACTCACGTTCGGTTGT 57.553 47.368 18.73 18.73 45.50 3.32
1065 1070 3.798506 CAACTCACGTTCGGTTGTG 57.201 52.632 13.55 0.00 36.55 3.33
1066 1071 0.303493 CAACTCACGTTCGGTTGTGG 59.697 55.000 13.55 0.00 36.55 4.17
1067 1072 1.433837 AACTCACGTTCGGTTGTGGC 61.434 55.000 0.00 0.00 36.74 5.01
1068 1073 1.594293 CTCACGTTCGGTTGTGGCT 60.594 57.895 0.00 0.00 36.74 4.75
1069 1074 1.557443 CTCACGTTCGGTTGTGGCTC 61.557 60.000 0.00 0.00 36.74 4.70
1070 1075 2.280592 ACGTTCGGTTGTGGCTCC 60.281 61.111 0.00 0.00 0.00 4.70
1071 1076 2.030562 CGTTCGGTTGTGGCTCCT 59.969 61.111 0.00 0.00 0.00 3.69
1072 1077 1.290955 CGTTCGGTTGTGGCTCCTA 59.709 57.895 0.00 0.00 0.00 2.94
1073 1078 0.108329 CGTTCGGTTGTGGCTCCTAT 60.108 55.000 0.00 0.00 0.00 2.57
1074 1079 1.653151 GTTCGGTTGTGGCTCCTATC 58.347 55.000 0.00 0.00 0.00 2.08
1075 1080 0.539986 TTCGGTTGTGGCTCCTATCC 59.460 55.000 0.00 0.00 0.00 2.59
1076 1081 0.325296 TCGGTTGTGGCTCCTATCCT 60.325 55.000 0.00 0.00 0.00 3.24
1077 1082 1.063492 TCGGTTGTGGCTCCTATCCTA 60.063 52.381 0.00 0.00 0.00 2.94
1078 1083 1.341531 CGGTTGTGGCTCCTATCCTAG 59.658 57.143 0.00 0.00 0.00 3.02
1079 1084 2.679082 GGTTGTGGCTCCTATCCTAGA 58.321 52.381 0.00 0.00 0.00 2.43
1080 1085 3.243724 GGTTGTGGCTCCTATCCTAGAT 58.756 50.000 0.00 0.00 0.00 1.98
1081 1086 3.007398 GGTTGTGGCTCCTATCCTAGATG 59.993 52.174 0.00 0.00 0.00 2.90
1082 1087 3.898123 GTTGTGGCTCCTATCCTAGATGA 59.102 47.826 0.00 0.00 0.00 2.92
1083 1088 4.199002 TGTGGCTCCTATCCTAGATGAA 57.801 45.455 0.00 0.00 0.00 2.57
1084 1089 4.556697 TGTGGCTCCTATCCTAGATGAAA 58.443 43.478 0.00 0.00 0.00 2.69
1085 1090 5.158141 TGTGGCTCCTATCCTAGATGAAAT 58.842 41.667 0.00 0.00 0.00 2.17
1086 1091 6.322931 TGTGGCTCCTATCCTAGATGAAATA 58.677 40.000 0.00 0.00 0.00 1.40
1087 1092 6.438741 TGTGGCTCCTATCCTAGATGAAATAG 59.561 42.308 0.00 0.00 0.00 1.73
1088 1093 6.665680 GTGGCTCCTATCCTAGATGAAATAGA 59.334 42.308 0.00 0.00 0.00 1.98
1089 1094 7.179338 GTGGCTCCTATCCTAGATGAAATAGAA 59.821 40.741 0.00 0.00 0.00 2.10
1090 1095 7.398618 TGGCTCCTATCCTAGATGAAATAGAAG 59.601 40.741 0.00 0.00 0.00 2.85
1091 1096 7.617723 GGCTCCTATCCTAGATGAAATAGAAGA 59.382 40.741 0.00 0.00 0.00 2.87
1092 1097 8.686334 GCTCCTATCCTAGATGAAATAGAAGAG 58.314 40.741 0.00 0.00 0.00 2.85
1093 1098 8.588290 TCCTATCCTAGATGAAATAGAAGAGC 57.412 38.462 0.00 0.00 0.00 4.09
1094 1099 8.397957 TCCTATCCTAGATGAAATAGAAGAGCT 58.602 37.037 0.00 0.00 0.00 4.09
1095 1100 9.034800 CCTATCCTAGATGAAATAGAAGAGCTT 57.965 37.037 0.00 0.00 0.00 3.74
1098 1103 9.600432 ATCCTAGATGAAATAGAAGAGCTTAGT 57.400 33.333 0.00 0.00 0.00 2.24
1099 1104 9.427821 TCCTAGATGAAATAGAAGAGCTTAGTT 57.572 33.333 0.00 0.00 0.00 2.24
1100 1105 9.474920 CCTAGATGAAATAGAAGAGCTTAGTTG 57.525 37.037 0.00 0.00 0.00 3.16
1102 1107 8.715191 AGATGAAATAGAAGAGCTTAGTTGTG 57.285 34.615 0.00 0.00 0.00 3.33
1103 1108 8.535335 AGATGAAATAGAAGAGCTTAGTTGTGA 58.465 33.333 0.00 0.00 0.00 3.58
1104 1109 9.323985 GATGAAATAGAAGAGCTTAGTTGTGAT 57.676 33.333 0.00 0.00 0.00 3.06
1105 1110 9.678260 ATGAAATAGAAGAGCTTAGTTGTGATT 57.322 29.630 0.00 0.00 0.00 2.57
1106 1111 9.507329 TGAAATAGAAGAGCTTAGTTGTGATTT 57.493 29.630 0.00 0.00 0.00 2.17
1110 1115 9.732130 ATAGAAGAGCTTAGTTGTGATTTTTCT 57.268 29.630 0.00 0.00 0.00 2.52
1111 1116 7.869800 AGAAGAGCTTAGTTGTGATTTTTCTG 58.130 34.615 0.00 0.00 0.00 3.02
1112 1117 7.500559 AGAAGAGCTTAGTTGTGATTTTTCTGT 59.499 33.333 0.00 0.00 0.00 3.41
1113 1118 7.573968 AGAGCTTAGTTGTGATTTTTCTGTT 57.426 32.000 0.00 0.00 0.00 3.16
1114 1119 8.000780 AGAGCTTAGTTGTGATTTTTCTGTTT 57.999 30.769 0.00 0.00 0.00 2.83
1115 1120 8.470002 AGAGCTTAGTTGTGATTTTTCTGTTTT 58.530 29.630 0.00 0.00 0.00 2.43
1116 1121 9.087424 GAGCTTAGTTGTGATTTTTCTGTTTTT 57.913 29.630 0.00 0.00 0.00 1.94
1117 1122 8.872845 AGCTTAGTTGTGATTTTTCTGTTTTTG 58.127 29.630 0.00 0.00 0.00 2.44
1118 1123 8.868916 GCTTAGTTGTGATTTTTCTGTTTTTGA 58.131 29.630 0.00 0.00 0.00 2.69
1122 1127 9.657419 AGTTGTGATTTTTCTGTTTTTGAGATT 57.343 25.926 0.00 0.00 0.00 2.40
1123 1128 9.906111 GTTGTGATTTTTCTGTTTTTGAGATTC 57.094 29.630 0.00 0.00 0.00 2.52
1124 1129 9.650539 TTGTGATTTTTCTGTTTTTGAGATTCA 57.349 25.926 0.00 0.00 0.00 2.57
1125 1130 9.650539 TGTGATTTTTCTGTTTTTGAGATTCAA 57.349 25.926 0.00 0.00 34.03 2.69
1126 1131 9.906111 GTGATTTTTCTGTTTTTGAGATTCAAC 57.094 29.630 0.00 0.00 35.89 3.18
1127 1132 9.650539 TGATTTTTCTGTTTTTGAGATTCAACA 57.349 25.926 0.00 0.00 35.89 3.33
1130 1135 9.434420 TTTTTCTGTTTTTGAGATTCAACATGT 57.566 25.926 0.00 0.00 35.89 3.21
1132 1137 9.734620 TTTCTGTTTTTGAGATTCAACATGTAG 57.265 29.630 0.00 0.00 35.89 2.74
1133 1138 8.450578 TCTGTTTTTGAGATTCAACATGTAGT 57.549 30.769 0.00 0.00 35.89 2.73
1134 1139 9.554395 TCTGTTTTTGAGATTCAACATGTAGTA 57.446 29.630 0.00 0.00 35.89 1.82
1137 1142 9.612620 GTTTTTGAGATTCAACATGTAGTAAGG 57.387 33.333 0.00 0.00 35.89 2.69
1138 1143 8.918202 TTTTGAGATTCAACATGTAGTAAGGT 57.082 30.769 0.00 0.00 35.89 3.50
1139 1144 8.547967 TTTGAGATTCAACATGTAGTAAGGTC 57.452 34.615 0.00 0.00 35.89 3.85
1140 1145 7.239763 TGAGATTCAACATGTAGTAAGGTCA 57.760 36.000 0.00 0.00 0.00 4.02
1141 1146 7.323420 TGAGATTCAACATGTAGTAAGGTCAG 58.677 38.462 0.00 0.00 0.00 3.51
1142 1147 6.109359 AGATTCAACATGTAGTAAGGTCAGC 58.891 40.000 0.00 0.00 0.00 4.26
1143 1148 4.882842 TCAACATGTAGTAAGGTCAGCA 57.117 40.909 0.00 0.00 0.00 4.41
1144 1149 5.222079 TCAACATGTAGTAAGGTCAGCAA 57.778 39.130 0.00 0.00 0.00 3.91
1145 1150 5.616270 TCAACATGTAGTAAGGTCAGCAAA 58.384 37.500 0.00 0.00 0.00 3.68
1146 1151 5.468746 TCAACATGTAGTAAGGTCAGCAAAC 59.531 40.000 0.00 0.00 0.00 2.93
1147 1152 5.228945 ACATGTAGTAAGGTCAGCAAACT 57.771 39.130 0.00 0.00 0.00 2.66
1148 1153 5.621193 ACATGTAGTAAGGTCAGCAAACTT 58.379 37.500 0.00 0.00 0.00 2.66
1149 1154 6.765403 ACATGTAGTAAGGTCAGCAAACTTA 58.235 36.000 0.00 0.00 0.00 2.24
1150 1155 6.649557 ACATGTAGTAAGGTCAGCAAACTTAC 59.350 38.462 15.58 15.58 44.17 2.34
1151 1156 5.544650 TGTAGTAAGGTCAGCAAACTTACC 58.455 41.667 18.31 8.86 44.64 2.85
1152 1157 3.660865 AGTAAGGTCAGCAAACTTACCG 58.339 45.455 18.31 0.00 43.79 4.02
1153 1158 1.892209 AAGGTCAGCAAACTTACCGG 58.108 50.000 0.00 0.00 43.79 5.28
1154 1159 0.605589 AGGTCAGCAAACTTACCGGC 60.606 55.000 0.00 0.00 43.79 6.13
1155 1160 0.887387 GGTCAGCAAACTTACCGGCA 60.887 55.000 0.00 0.00 30.67 5.69
1156 1161 0.237498 GTCAGCAAACTTACCGGCAC 59.763 55.000 0.00 0.00 0.00 5.01
1157 1162 0.179043 TCAGCAAACTTACCGGCACA 60.179 50.000 0.00 0.00 0.00 4.57
1158 1163 0.881118 CAGCAAACTTACCGGCACAT 59.119 50.000 0.00 0.00 0.00 3.21
1159 1164 1.135689 CAGCAAACTTACCGGCACATC 60.136 52.381 0.00 0.00 0.00 3.06
1160 1165 1.165270 GCAAACTTACCGGCACATCT 58.835 50.000 0.00 0.00 0.00 2.90
1161 1166 2.027561 AGCAAACTTACCGGCACATCTA 60.028 45.455 0.00 0.00 0.00 1.98
1162 1167 2.943033 GCAAACTTACCGGCACATCTAT 59.057 45.455 0.00 0.00 0.00 1.98
1163 1168 3.242739 GCAAACTTACCGGCACATCTATG 60.243 47.826 0.00 0.00 0.00 2.23
1164 1169 3.906720 AACTTACCGGCACATCTATGT 57.093 42.857 0.00 0.00 42.84 2.29
1185 1190 2.563670 CAAAACGTGCATGCACATTG 57.436 45.000 40.95 34.86 46.47 2.82
1186 1191 2.125685 CAAAACGTGCATGCACATTGA 58.874 42.857 40.95 10.39 46.47 2.57
1187 1192 2.505628 AAACGTGCATGCACATTGAA 57.494 40.000 40.95 9.62 46.47 2.69
1188 1193 2.728690 AACGTGCATGCACATTGAAT 57.271 40.000 40.95 21.79 46.47 2.57
1189 1194 1.985334 ACGTGCATGCACATTGAATG 58.015 45.000 40.95 28.07 46.47 2.67
1190 1195 1.270274 ACGTGCATGCACATTGAATGT 59.730 42.857 40.95 28.65 46.47 2.71
1202 1207 4.797471 ACATTGAATGTGACCGAATGTTG 58.203 39.130 10.45 0.00 43.01 3.33
1203 1208 3.913548 TTGAATGTGACCGAATGTTGG 57.086 42.857 0.00 0.00 0.00 3.77
1204 1209 1.539388 TGAATGTGACCGAATGTTGGC 59.461 47.619 0.00 0.00 0.00 4.52
1205 1210 1.812571 GAATGTGACCGAATGTTGGCT 59.187 47.619 0.00 0.00 0.00 4.75
1206 1211 2.779755 ATGTGACCGAATGTTGGCTA 57.220 45.000 0.00 0.00 0.00 3.93
1207 1212 2.093306 TGTGACCGAATGTTGGCTAG 57.907 50.000 0.00 0.00 0.00 3.42
1208 1213 1.621317 TGTGACCGAATGTTGGCTAGA 59.379 47.619 0.00 0.00 0.00 2.43
1209 1214 2.271800 GTGACCGAATGTTGGCTAGAG 58.728 52.381 0.00 0.00 0.00 2.43
1210 1215 1.207089 TGACCGAATGTTGGCTAGAGG 59.793 52.381 0.00 0.00 0.00 3.69
1211 1216 1.480954 GACCGAATGTTGGCTAGAGGA 59.519 52.381 0.00 0.00 0.00 3.71
1212 1217 1.482593 ACCGAATGTTGGCTAGAGGAG 59.517 52.381 0.00 0.00 0.00 3.69
1213 1218 1.757118 CCGAATGTTGGCTAGAGGAGA 59.243 52.381 0.00 0.00 0.00 3.71
1214 1219 2.482142 CCGAATGTTGGCTAGAGGAGAC 60.482 54.545 0.00 0.00 0.00 3.36
1215 1220 2.482142 CGAATGTTGGCTAGAGGAGACC 60.482 54.545 0.00 0.00 28.20 3.85
1216 1221 1.501582 ATGTTGGCTAGAGGAGACCC 58.498 55.000 0.00 0.00 28.20 4.46
1217 1222 0.617820 TGTTGGCTAGAGGAGACCCC 60.618 60.000 0.00 0.00 28.20 4.95
1260 1265 3.140814 GCTGATTGCCCGGGGAAC 61.141 66.667 31.56 22.66 35.15 3.62
1261 1266 2.354729 CTGATTGCCCGGGGAACA 59.645 61.111 31.56 25.69 0.00 3.18
1262 1267 2.034999 TGATTGCCCGGGGAACAC 59.965 61.111 31.56 25.31 0.00 3.32
1263 1268 2.355115 GATTGCCCGGGGAACACT 59.645 61.111 31.56 15.18 0.00 3.55
1264 1269 1.304134 GATTGCCCGGGGAACACTT 60.304 57.895 31.56 14.75 0.00 3.16
1265 1270 0.898326 GATTGCCCGGGGAACACTTT 60.898 55.000 31.56 14.30 0.00 2.66
1266 1271 0.471022 ATTGCCCGGGGAACACTTTT 60.471 50.000 31.56 10.41 0.00 2.27
1267 1272 1.395826 TTGCCCGGGGAACACTTTTG 61.396 55.000 25.44 0.00 0.00 2.44
1268 1273 1.830847 GCCCGGGGAACACTTTTGT 60.831 57.895 25.28 0.00 37.67 2.83
1270 1275 0.387565 CCCGGGGAACACTTTTGTTG 59.612 55.000 14.71 0.00 46.43 3.33
1271 1276 1.394618 CCGGGGAACACTTTTGTTGA 58.605 50.000 0.00 0.00 46.43 3.18
1272 1277 1.751924 CCGGGGAACACTTTTGTTGAA 59.248 47.619 0.00 0.00 46.43 2.69
1273 1278 2.364002 CCGGGGAACACTTTTGTTGAAT 59.636 45.455 0.00 0.00 46.43 2.57
1274 1279 3.570550 CCGGGGAACACTTTTGTTGAATA 59.429 43.478 0.00 0.00 46.43 1.75
1275 1280 4.038162 CCGGGGAACACTTTTGTTGAATAA 59.962 41.667 0.00 0.00 46.43 1.40
1276 1281 5.452077 CCGGGGAACACTTTTGTTGAATAAA 60.452 40.000 0.00 0.00 46.43 1.40
1277 1282 5.689961 CGGGGAACACTTTTGTTGAATAAAG 59.310 40.000 0.00 0.00 46.43 1.85
1278 1283 5.465390 GGGGAACACTTTTGTTGAATAAAGC 59.535 40.000 0.00 0.00 46.43 3.51
1279 1284 6.280643 GGGAACACTTTTGTTGAATAAAGCT 58.719 36.000 0.00 0.00 46.43 3.74
1280 1285 6.420903 GGGAACACTTTTGTTGAATAAAGCTC 59.579 38.462 0.00 0.00 46.43 4.09
1281 1286 7.203218 GGAACACTTTTGTTGAATAAAGCTCT 58.797 34.615 0.00 0.00 46.43 4.09
1282 1287 7.379797 GGAACACTTTTGTTGAATAAAGCTCTC 59.620 37.037 0.00 0.00 46.43 3.20
1283 1288 7.573968 ACACTTTTGTTGAATAAAGCTCTCT 57.426 32.000 0.00 0.00 35.31 3.10
1284 1289 7.420800 ACACTTTTGTTGAATAAAGCTCTCTG 58.579 34.615 0.00 0.00 35.31 3.35
1285 1290 7.283127 ACACTTTTGTTGAATAAAGCTCTCTGA 59.717 33.333 0.00 0.00 35.31 3.27
1286 1291 8.295288 CACTTTTGTTGAATAAAGCTCTCTGAT 58.705 33.333 0.00 0.00 35.31 2.90
1287 1292 8.854117 ACTTTTGTTGAATAAAGCTCTCTGATT 58.146 29.630 0.00 0.00 35.31 2.57
1288 1293 9.688592 CTTTTGTTGAATAAAGCTCTCTGATTT 57.311 29.630 0.00 0.00 37.99 2.17
1289 1294 9.467258 TTTTGTTGAATAAAGCTCTCTGATTTG 57.533 29.630 0.00 0.00 34.88 2.32
1290 1295 6.615088 TGTTGAATAAAGCTCTCTGATTTGC 58.385 36.000 0.00 0.00 34.88 3.68
1291 1296 5.824904 TGAATAAAGCTCTCTGATTTGCC 57.175 39.130 0.00 0.00 34.88 4.52
1292 1297 4.641989 TGAATAAAGCTCTCTGATTTGCCC 59.358 41.667 0.00 0.00 34.88 5.36
1293 1298 1.457346 AAAGCTCTCTGATTTGCCCG 58.543 50.000 0.00 0.00 32.52 6.13
1294 1299 1.028868 AAGCTCTCTGATTTGCCCGC 61.029 55.000 0.00 0.00 0.00 6.13
1295 1300 1.746615 GCTCTCTGATTTGCCCGCA 60.747 57.895 0.00 0.00 0.00 5.69
1296 1301 1.308069 GCTCTCTGATTTGCCCGCAA 61.308 55.000 0.00 0.00 0.00 4.85
1321 1326 6.980051 AAAAGTAAGTGCCTCCTTATTACG 57.020 37.500 0.00 0.00 32.82 3.18
1322 1327 4.056092 AGTAAGTGCCTCCTTATTACGC 57.944 45.455 0.00 0.00 32.82 4.42
1323 1328 1.935933 AAGTGCCTCCTTATTACGCG 58.064 50.000 3.53 3.53 0.00 6.01
1324 1329 0.104304 AGTGCCTCCTTATTACGCGG 59.896 55.000 12.47 0.00 0.00 6.46
1325 1330 0.103572 GTGCCTCCTTATTACGCGGA 59.896 55.000 12.47 0.00 0.00 5.54
1326 1331 0.825410 TGCCTCCTTATTACGCGGAA 59.175 50.000 6.05 6.05 0.00 4.30
1327 1332 1.207570 TGCCTCCTTATTACGCGGAAA 59.792 47.619 8.38 2.57 0.00 3.13
1328 1333 2.282407 GCCTCCTTATTACGCGGAAAA 58.718 47.619 8.38 3.07 0.00 2.29
1329 1334 2.876550 GCCTCCTTATTACGCGGAAAAT 59.123 45.455 8.38 8.37 0.00 1.82
1330 1335 4.060205 GCCTCCTTATTACGCGGAAAATA 58.940 43.478 8.38 7.29 0.00 1.40
1331 1336 4.512571 GCCTCCTTATTACGCGGAAAATAA 59.487 41.667 8.38 14.46 0.00 1.40
1332 1337 5.180680 GCCTCCTTATTACGCGGAAAATAAT 59.819 40.000 8.38 5.98 29.65 1.28
1333 1338 6.599437 CCTCCTTATTACGCGGAAAATAATG 58.401 40.000 8.38 12.55 29.65 1.90
1334 1339 6.425721 CCTCCTTATTACGCGGAAAATAATGA 59.574 38.462 8.38 15.62 29.65 2.57
1335 1340 7.119262 CCTCCTTATTACGCGGAAAATAATGAT 59.881 37.037 8.38 0.00 29.65 2.45
1336 1341 8.385898 TCCTTATTACGCGGAAAATAATGATT 57.614 30.769 8.38 0.00 29.65 2.57
1337 1342 8.500773 TCCTTATTACGCGGAAAATAATGATTC 58.499 33.333 8.38 0.00 29.65 2.52
1338 1343 7.749126 CCTTATTACGCGGAAAATAATGATTCC 59.251 37.037 8.38 0.00 41.39 3.01
1339 1344 6.877611 ATTACGCGGAAAATAATGATTCCT 57.122 33.333 8.38 0.00 42.40 3.36
1340 1345 4.813296 ACGCGGAAAATAATGATTCCTC 57.187 40.909 12.47 0.00 42.40 3.71
1341 1346 3.564225 ACGCGGAAAATAATGATTCCTCC 59.436 43.478 12.47 0.00 42.40 4.30
1342 1347 3.563808 CGCGGAAAATAATGATTCCTCCA 59.436 43.478 0.00 0.00 42.40 3.86
1343 1348 4.036262 CGCGGAAAATAATGATTCCTCCAA 59.964 41.667 0.00 0.00 42.40 3.53
1344 1349 5.281727 GCGGAAAATAATGATTCCTCCAAC 58.718 41.667 3.35 0.00 42.40 3.77
1345 1350 5.067805 GCGGAAAATAATGATTCCTCCAACT 59.932 40.000 3.35 0.00 42.40 3.16
1346 1351 6.498304 CGGAAAATAATGATTCCTCCAACTG 58.502 40.000 3.35 0.00 42.40 3.16
1347 1352 6.318648 CGGAAAATAATGATTCCTCCAACTGA 59.681 38.462 3.35 0.00 42.40 3.41
1348 1353 7.484140 GGAAAATAATGATTCCTCCAACTGAC 58.516 38.462 0.00 0.00 41.54 3.51
1349 1354 6.683974 AAATAATGATTCCTCCAACTGACG 57.316 37.500 0.00 0.00 0.00 4.35
1350 1355 2.698855 ATGATTCCTCCAACTGACGG 57.301 50.000 0.00 0.00 0.00 4.79
1351 1356 1.348064 TGATTCCTCCAACTGACGGT 58.652 50.000 0.00 0.00 0.00 4.83
1352 1357 2.531771 TGATTCCTCCAACTGACGGTA 58.468 47.619 0.00 0.00 0.00 4.02
1353 1358 2.496070 TGATTCCTCCAACTGACGGTAG 59.504 50.000 0.00 0.00 0.00 3.18
1354 1359 1.263356 TTCCTCCAACTGACGGTAGG 58.737 55.000 0.00 0.00 0.00 3.18
1355 1360 0.613853 TCCTCCAACTGACGGTAGGG 60.614 60.000 2.49 1.08 0.00 3.53
1356 1361 0.613853 CCTCCAACTGACGGTAGGGA 60.614 60.000 7.35 7.35 32.78 4.20
1357 1362 0.531200 CTCCAACTGACGGTAGGGAC 59.469 60.000 4.09 0.00 31.21 4.46
1358 1363 0.901580 TCCAACTGACGGTAGGGACC 60.902 60.000 4.09 0.00 43.03 4.46
1359 1364 1.595357 CAACTGACGGTAGGGACCC 59.405 63.158 0.59 0.59 43.64 4.46
1360 1365 1.156803 AACTGACGGTAGGGACCCA 59.843 57.895 14.60 0.00 43.64 4.51
1361 1366 1.190178 AACTGACGGTAGGGACCCAC 61.190 60.000 14.60 8.88 43.64 4.61
1362 1367 1.305046 CTGACGGTAGGGACCCACT 60.305 63.158 14.60 0.00 43.64 4.00
1363 1368 1.605058 CTGACGGTAGGGACCCACTG 61.605 65.000 14.60 15.63 43.64 3.66
1364 1369 2.284405 ACGGTAGGGACCCACTGG 60.284 66.667 14.60 7.94 43.64 4.00
1365 1370 2.038329 CGGTAGGGACCCACTGGA 59.962 66.667 14.60 0.00 43.64 3.86
1366 1371 2.356780 CGGTAGGGACCCACTGGAC 61.357 68.421 14.60 2.20 43.64 4.02
1367 1372 2.356780 GGTAGGGACCCACTGGACG 61.357 68.421 14.60 0.00 40.23 4.79
1368 1373 2.038329 TAGGGACCCACTGGACGG 59.962 66.667 14.60 0.00 34.81 4.79
1421 1426 4.729918 CTGGCTGCTGGGACCCAC 62.730 72.222 9.95 7.65 0.00 4.61
1424 1429 4.729918 GCTGCTGGGACCCACCTG 62.730 72.222 9.95 8.82 38.98 4.00
1425 1430 2.930019 CTGCTGGGACCCACCTGA 60.930 66.667 9.95 0.00 38.98 3.86
1426 1431 3.249189 TGCTGGGACCCACCTGAC 61.249 66.667 9.95 0.00 38.98 3.51
1427 1432 4.394712 GCTGGGACCCACCTGACG 62.395 72.222 9.95 0.00 38.98 4.35
1428 1433 3.706373 CTGGGACCCACCTGACGG 61.706 72.222 9.95 0.00 38.98 4.79
1434 1439 4.489771 CCCACCTGACGGGCCATC 62.490 72.222 4.39 0.00 36.72 3.51
1435 1440 4.838152 CCACCTGACGGGCCATCG 62.838 72.222 4.39 1.48 39.10 3.84
1436 1441 4.082523 CACCTGACGGGCCATCGT 62.083 66.667 4.39 5.75 46.83 3.73
1437 1442 2.363276 ACCTGACGGGCCATCGTA 60.363 61.111 4.39 0.00 43.96 3.43
1438 1443 1.760875 ACCTGACGGGCCATCGTAT 60.761 57.895 4.39 0.00 43.96 3.06
1439 1444 1.335132 ACCTGACGGGCCATCGTATT 61.335 55.000 4.39 0.00 43.96 1.89
1440 1445 0.179056 CCTGACGGGCCATCGTATTT 60.179 55.000 4.39 0.00 43.96 1.40
1441 1446 1.217882 CTGACGGGCCATCGTATTTC 58.782 55.000 4.39 0.00 43.96 2.17
1442 1447 0.537653 TGACGGGCCATCGTATTTCA 59.462 50.000 4.39 0.00 43.96 2.69
1443 1448 0.935196 GACGGGCCATCGTATTTCAC 59.065 55.000 4.39 0.00 43.96 3.18
1444 1449 0.250793 ACGGGCCATCGTATTTCACA 59.749 50.000 4.39 0.00 41.98 3.58
1445 1450 1.339247 ACGGGCCATCGTATTTCACAA 60.339 47.619 4.39 0.00 41.98 3.33
1446 1451 1.740585 CGGGCCATCGTATTTCACAAA 59.259 47.619 4.39 0.00 0.00 2.83
1447 1452 2.162608 CGGGCCATCGTATTTCACAAAA 59.837 45.455 4.39 0.00 0.00 2.44
1448 1453 3.366476 CGGGCCATCGTATTTCACAAAAA 60.366 43.478 4.39 0.00 0.00 1.94
2054 2059 0.752376 CCCTCGTACTCCTCTCCACC 60.752 65.000 0.00 0.00 0.00 4.61
2056 2061 0.034380 CTCGTACTCCTCTCCACCCA 60.034 60.000 0.00 0.00 0.00 4.51
2089 2094 3.399181 ATCTTCCCCGGCTTCGCA 61.399 61.111 0.00 0.00 0.00 5.10
2167 2172 2.025793 TGGTCAACTTGGTCAAGGAACA 60.026 45.455 14.29 9.00 42.53 3.18
2203 2208 3.881688 GAGTATTGTACGTGGAGAGGCTA 59.118 47.826 0.00 0.00 0.00 3.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 2.515057 TTTGTTGACCACGCCGCT 60.515 55.556 0.00 0.00 0.00 5.52
100 101 2.202756 GCGACCATGGACCTCGTC 60.203 66.667 21.47 9.93 0.00 4.20
153 156 3.490348 CTGTCAGGTGGAGGAAACATTT 58.510 45.455 0.00 0.00 0.00 2.32
154 157 2.815589 GCTGTCAGGTGGAGGAAACATT 60.816 50.000 1.14 0.00 0.00 2.71
199 204 3.563512 AGGCACTTCCTTCCGTGT 58.436 55.556 0.00 0.00 44.75 4.49
255 260 0.676782 CCAAATCTGACGGGTCCCAC 60.677 60.000 9.12 1.69 0.00 4.61
689 694 5.743117 ACTCTCCACGTACAGTATACTTCT 58.257 41.667 1.56 0.00 0.00 2.85
703 708 2.487428 CAGCCGAGACTCTCCACG 59.513 66.667 0.03 0.00 0.00 4.94
716 721 4.416738 GCAGTCAGGGACCCAGCC 62.417 72.222 14.60 0.00 32.18 4.85
726 731 1.519719 GGGTAGCTCCAGCAGTCAG 59.480 63.158 0.48 0.00 45.16 3.51
727 732 1.990060 GGGGTAGCTCCAGCAGTCA 60.990 63.158 0.48 0.00 45.16 3.41
729 734 1.687493 GAGGGGTAGCTCCAGCAGT 60.687 63.158 0.48 0.00 45.16 4.40
745 750 3.696782 GCACAGCTGCTTCATTGAG 57.303 52.632 15.27 0.00 40.63 3.02
790 795 7.284034 ACATGAAATCTTGATCATACCTGGTTC 59.716 37.037 3.84 0.00 34.61 3.62
797 802 8.387190 TCCATCACATGAAATCTTGATCATAC 57.613 34.615 0.00 0.00 34.61 2.39
798 803 7.174426 GCTCCATCACATGAAATCTTGATCATA 59.826 37.037 0.00 0.00 34.61 2.15
799 804 6.016192 GCTCCATCACATGAAATCTTGATCAT 60.016 38.462 0.00 0.00 36.74 2.45
800 805 5.298527 GCTCCATCACATGAAATCTTGATCA 59.701 40.000 0.00 0.00 0.00 2.92
801 806 5.298527 TGCTCCATCACATGAAATCTTGATC 59.701 40.000 0.00 0.00 0.00 2.92
802 807 5.067413 GTGCTCCATCACATGAAATCTTGAT 59.933 40.000 0.00 0.00 36.97 2.57
803 808 4.397103 GTGCTCCATCACATGAAATCTTGA 59.603 41.667 0.00 0.00 36.97 3.02
804 809 4.398358 AGTGCTCCATCACATGAAATCTTG 59.602 41.667 0.00 0.00 39.35 3.02
805 810 4.597004 AGTGCTCCATCACATGAAATCTT 58.403 39.130 0.00 0.00 39.35 2.40
806 811 4.197750 GAGTGCTCCATCACATGAAATCT 58.802 43.478 0.00 0.00 39.35 2.40
807 812 3.943381 TGAGTGCTCCATCACATGAAATC 59.057 43.478 0.00 0.00 39.35 2.17
808 813 3.959293 TGAGTGCTCCATCACATGAAAT 58.041 40.909 0.00 0.00 39.35 2.17
809 814 3.421919 TGAGTGCTCCATCACATGAAA 57.578 42.857 0.00 0.00 39.35 2.69
810 815 3.421919 TTGAGTGCTCCATCACATGAA 57.578 42.857 0.00 0.00 39.35 2.57
811 816 3.275999 CATTGAGTGCTCCATCACATGA 58.724 45.455 0.00 0.00 39.35 3.07
812 817 3.014623 ACATTGAGTGCTCCATCACATG 58.985 45.455 0.00 0.00 39.35 3.21
813 818 3.014623 CACATTGAGTGCTCCATCACAT 58.985 45.455 0.00 0.00 42.15 3.21
814 819 2.429478 CACATTGAGTGCTCCATCACA 58.571 47.619 0.00 0.00 42.15 3.58
825 830 1.609061 CGACCTTCTGCCACATTGAGT 60.609 52.381 0.00 0.00 0.00 3.41
826 831 1.081892 CGACCTTCTGCCACATTGAG 58.918 55.000 0.00 0.00 0.00 3.02
827 832 0.684535 TCGACCTTCTGCCACATTGA 59.315 50.000 0.00 0.00 0.00 2.57
828 833 1.466167 CTTCGACCTTCTGCCACATTG 59.534 52.381 0.00 0.00 0.00 2.82
829 834 1.347707 TCTTCGACCTTCTGCCACATT 59.652 47.619 0.00 0.00 0.00 2.71
830 835 0.976641 TCTTCGACCTTCTGCCACAT 59.023 50.000 0.00 0.00 0.00 3.21
831 836 0.318441 CTCTTCGACCTTCTGCCACA 59.682 55.000 0.00 0.00 0.00 4.17
832 837 0.390472 CCTCTTCGACCTTCTGCCAC 60.390 60.000 0.00 0.00 0.00 5.01
833 838 0.832135 ACCTCTTCGACCTTCTGCCA 60.832 55.000 0.00 0.00 0.00 4.92
834 839 0.390472 CACCTCTTCGACCTTCTGCC 60.390 60.000 0.00 0.00 0.00 4.85
835 840 1.016653 GCACCTCTTCGACCTTCTGC 61.017 60.000 0.00 0.00 0.00 4.26
836 841 0.734253 CGCACCTCTTCGACCTTCTG 60.734 60.000 0.00 0.00 0.00 3.02
837 842 1.587054 CGCACCTCTTCGACCTTCT 59.413 57.895 0.00 0.00 0.00 2.85
838 843 1.446272 CCGCACCTCTTCGACCTTC 60.446 63.158 0.00 0.00 0.00 3.46
839 844 2.657237 CCGCACCTCTTCGACCTT 59.343 61.111 0.00 0.00 0.00 3.50
840 845 3.382832 CCCGCACCTCTTCGACCT 61.383 66.667 0.00 0.00 0.00 3.85
841 846 3.692406 ACCCGCACCTCTTCGACC 61.692 66.667 0.00 0.00 0.00 4.79
842 847 2.432628 CACCCGCACCTCTTCGAC 60.433 66.667 0.00 0.00 0.00 4.20
843 848 3.691342 CCACCCGCACCTCTTCGA 61.691 66.667 0.00 0.00 0.00 3.71
845 850 4.329545 TGCCACCCGCACCTCTTC 62.330 66.667 0.00 0.00 44.64 2.87
860 865 0.108945 GGATACGTACCGGGCTATGC 60.109 60.000 6.32 0.00 0.00 3.14
874 879 1.883084 CACCCAAGAGCGCGGATAC 60.883 63.158 8.83 0.00 0.00 2.24
875 880 2.499205 CACCCAAGAGCGCGGATA 59.501 61.111 8.83 0.00 0.00 2.59
879 884 4.093952 CAAGCACCCAAGAGCGCG 62.094 66.667 0.00 0.00 34.39 6.86
880 885 3.741476 CCAAGCACCCAAGAGCGC 61.741 66.667 0.00 0.00 34.39 5.92
881 886 2.281761 ACCAAGCACCCAAGAGCG 60.282 61.111 0.00 0.00 34.39 5.03
882 887 2.924105 GCACCAAGCACCCAAGAGC 61.924 63.158 0.00 0.00 44.79 4.09
883 888 3.359002 GCACCAAGCACCCAAGAG 58.641 61.111 0.00 0.00 44.79 2.85
892 897 1.136891 ACCAAAAGTCTTGCACCAAGC 59.863 47.619 0.00 0.00 40.84 4.01
893 898 2.426738 TCACCAAAAGTCTTGCACCAAG 59.573 45.455 0.00 0.00 42.25 3.61
894 899 2.165437 GTCACCAAAAGTCTTGCACCAA 59.835 45.455 0.00 0.00 0.00 3.67
895 900 1.748493 GTCACCAAAAGTCTTGCACCA 59.252 47.619 0.00 0.00 0.00 4.17
896 901 1.748493 TGTCACCAAAAGTCTTGCACC 59.252 47.619 0.00 0.00 0.00 5.01
897 902 3.715628 ATGTCACCAAAAGTCTTGCAC 57.284 42.857 0.00 0.00 0.00 4.57
898 903 4.458989 GGATATGTCACCAAAAGTCTTGCA 59.541 41.667 0.00 0.00 0.00 4.08
899 904 4.437390 CGGATATGTCACCAAAAGTCTTGC 60.437 45.833 0.00 0.00 0.00 4.01
900 905 4.935205 TCGGATATGTCACCAAAAGTCTTG 59.065 41.667 0.00 0.00 0.00 3.02
901 906 5.160607 TCGGATATGTCACCAAAAGTCTT 57.839 39.130 0.00 0.00 0.00 3.01
902 907 4.819105 TCGGATATGTCACCAAAAGTCT 57.181 40.909 0.00 0.00 0.00 3.24
903 908 4.511826 GGATCGGATATGTCACCAAAAGTC 59.488 45.833 0.00 0.00 0.00 3.01
904 909 4.164221 AGGATCGGATATGTCACCAAAAGT 59.836 41.667 0.00 0.00 0.00 2.66
905 910 4.708177 AGGATCGGATATGTCACCAAAAG 58.292 43.478 0.00 0.00 0.00 2.27
906 911 4.408921 AGAGGATCGGATATGTCACCAAAA 59.591 41.667 0.00 0.00 42.67 2.44
907 912 3.967326 AGAGGATCGGATATGTCACCAAA 59.033 43.478 0.00 0.00 42.67 3.28
908 913 3.576861 AGAGGATCGGATATGTCACCAA 58.423 45.455 0.00 0.00 42.67 3.67
909 914 3.244887 AGAGGATCGGATATGTCACCA 57.755 47.619 0.00 0.00 42.67 4.17
910 915 5.923733 ATAAGAGGATCGGATATGTCACC 57.076 43.478 0.00 0.00 42.67 4.02
911 916 7.923344 CCATTATAAGAGGATCGGATATGTCAC 59.077 40.741 1.40 0.00 42.67 3.67
912 917 7.839200 TCCATTATAAGAGGATCGGATATGTCA 59.161 37.037 5.55 0.00 42.67 3.58
913 918 8.239038 TCCATTATAAGAGGATCGGATATGTC 57.761 38.462 5.55 0.00 42.67 3.06
914 919 8.609617 TTCCATTATAAGAGGATCGGATATGT 57.390 34.615 9.53 0.00 42.67 2.29
915 920 7.655328 GCTTCCATTATAAGAGGATCGGATATG 59.345 40.741 9.53 0.00 42.67 1.78
916 921 7.202047 GGCTTCCATTATAAGAGGATCGGATAT 60.202 40.741 9.53 0.00 42.67 1.63
917 922 6.098409 GGCTTCCATTATAAGAGGATCGGATA 59.902 42.308 9.53 0.00 42.67 2.59
918 923 5.104735 GGCTTCCATTATAAGAGGATCGGAT 60.105 44.000 9.53 0.00 42.67 4.18
919 924 4.223032 GGCTTCCATTATAAGAGGATCGGA 59.777 45.833 9.53 0.00 42.67 4.55
920 925 4.508662 GGCTTCCATTATAAGAGGATCGG 58.491 47.826 9.53 5.79 42.67 4.18
921 926 4.223923 AGGGCTTCCATTATAAGAGGATCG 59.776 45.833 9.53 6.35 42.67 3.69
922 927 5.770685 AGGGCTTCCATTATAAGAGGATC 57.229 43.478 9.53 5.92 0.00 3.36
923 928 6.968248 TGATAGGGCTTCCATTATAAGAGGAT 59.032 38.462 9.53 0.00 0.00 3.24
924 929 6.331032 TGATAGGGCTTCCATTATAAGAGGA 58.669 40.000 5.55 5.55 0.00 3.71
925 930 6.627087 TGATAGGGCTTCCATTATAAGAGG 57.373 41.667 1.24 1.24 0.00 3.69
926 931 7.066766 GCATTGATAGGGCTTCCATTATAAGAG 59.933 40.741 0.00 0.00 0.00 2.85
927 932 6.886459 GCATTGATAGGGCTTCCATTATAAGA 59.114 38.462 0.00 0.00 0.00 2.10
928 933 6.183360 CGCATTGATAGGGCTTCCATTATAAG 60.183 42.308 0.00 0.00 0.00 1.73
929 934 5.647658 CGCATTGATAGGGCTTCCATTATAA 59.352 40.000 0.00 0.00 0.00 0.98
930 935 5.045942 TCGCATTGATAGGGCTTCCATTATA 60.046 40.000 0.00 0.00 0.00 0.98
931 936 4.012374 CGCATTGATAGGGCTTCCATTAT 58.988 43.478 0.00 0.00 0.00 1.28
932 937 3.072330 TCGCATTGATAGGGCTTCCATTA 59.928 43.478 0.00 0.00 0.00 1.90
933 938 2.158623 TCGCATTGATAGGGCTTCCATT 60.159 45.455 0.00 0.00 0.00 3.16
934 939 1.421268 TCGCATTGATAGGGCTTCCAT 59.579 47.619 0.00 0.00 0.00 3.41
935 940 0.836606 TCGCATTGATAGGGCTTCCA 59.163 50.000 0.00 0.00 0.00 3.53
936 941 1.070758 TCTCGCATTGATAGGGCTTCC 59.929 52.381 0.00 0.00 0.00 3.46
937 942 2.533266 TCTCGCATTGATAGGGCTTC 57.467 50.000 0.00 0.00 0.00 3.86
938 943 2.486191 CCTTCTCGCATTGATAGGGCTT 60.486 50.000 0.00 0.00 0.00 4.35
939 944 1.071385 CCTTCTCGCATTGATAGGGCT 59.929 52.381 0.00 0.00 0.00 5.19
940 945 1.070758 TCCTTCTCGCATTGATAGGGC 59.929 52.381 0.00 0.00 32.06 5.19
941 946 3.134458 GTTCCTTCTCGCATTGATAGGG 58.866 50.000 0.00 0.00 32.06 3.53
942 947 2.797156 CGTTCCTTCTCGCATTGATAGG 59.203 50.000 0.00 0.00 32.30 2.57
952 957 1.674908 GCAAAAAGCGTTCCTTCTCG 58.325 50.000 0.00 0.00 31.99 4.04
963 968 2.033747 GCCTCGAAGTTTTGCAAAAAGC 60.034 45.455 25.40 14.46 45.96 3.51
964 969 2.539688 GGCCTCGAAGTTTTGCAAAAAG 59.460 45.455 25.40 17.79 0.00 2.27
965 970 2.167487 AGGCCTCGAAGTTTTGCAAAAA 59.833 40.909 25.40 9.44 0.00 1.94
966 971 1.754226 AGGCCTCGAAGTTTTGCAAAA 59.246 42.857 20.46 20.46 0.00 2.44
967 972 1.398692 AGGCCTCGAAGTTTTGCAAA 58.601 45.000 8.05 8.05 0.00 3.68
968 973 2.264005 TAGGCCTCGAAGTTTTGCAA 57.736 45.000 9.68 0.00 0.00 4.08
969 974 2.356135 GATAGGCCTCGAAGTTTTGCA 58.644 47.619 9.68 0.00 0.00 4.08
970 975 1.327764 CGATAGGCCTCGAAGTTTTGC 59.672 52.381 9.68 0.00 41.12 3.68
971 976 1.327764 GCGATAGGCCTCGAAGTTTTG 59.672 52.381 17.84 0.00 41.12 2.44
972 977 1.066430 TGCGATAGGCCTCGAAGTTTT 60.066 47.619 17.84 0.00 41.12 2.43
973 978 0.535335 TGCGATAGGCCTCGAAGTTT 59.465 50.000 17.84 0.00 41.12 2.66
974 979 0.753262 ATGCGATAGGCCTCGAAGTT 59.247 50.000 17.84 0.00 41.12 2.66
975 980 0.032678 CATGCGATAGGCCTCGAAGT 59.967 55.000 17.84 0.37 41.12 3.01
976 981 0.032678 ACATGCGATAGGCCTCGAAG 59.967 55.000 17.84 8.66 41.12 3.79
977 982 0.249447 CACATGCGATAGGCCTCGAA 60.249 55.000 17.84 8.10 41.12 3.71
978 983 1.106944 TCACATGCGATAGGCCTCGA 61.107 55.000 17.84 0.00 41.12 4.04
979 984 0.037882 ATCACATGCGATAGGCCTCG 60.038 55.000 9.68 9.83 42.61 4.63
980 985 3.319137 TTATCACATGCGATAGGCCTC 57.681 47.619 9.68 0.00 42.61 4.70
981 986 3.603532 CATTATCACATGCGATAGGCCT 58.396 45.455 11.78 11.78 42.61 5.19
982 987 2.679837 CCATTATCACATGCGATAGGCC 59.320 50.000 0.00 0.00 42.61 5.19
983 988 3.599343 TCCATTATCACATGCGATAGGC 58.401 45.455 3.78 0.00 43.96 3.93
984 989 4.867047 GTCTCCATTATCACATGCGATAGG 59.133 45.833 3.78 3.70 0.00 2.57
985 990 5.575995 CAGTCTCCATTATCACATGCGATAG 59.424 44.000 3.78 0.00 0.00 2.08
986 991 5.243730 TCAGTCTCCATTATCACATGCGATA 59.756 40.000 0.00 0.00 0.00 2.92
987 992 4.039609 TCAGTCTCCATTATCACATGCGAT 59.960 41.667 1.21 1.21 0.00 4.58
988 993 3.384467 TCAGTCTCCATTATCACATGCGA 59.616 43.478 0.00 0.00 0.00 5.10
989 994 3.492383 GTCAGTCTCCATTATCACATGCG 59.508 47.826 0.00 0.00 0.00 4.73
990 995 4.510711 CAGTCAGTCTCCATTATCACATGC 59.489 45.833 0.00 0.00 0.00 4.06
991 996 5.668471 ACAGTCAGTCTCCATTATCACATG 58.332 41.667 0.00 0.00 0.00 3.21
992 997 5.911752 GACAGTCAGTCTCCATTATCACAT 58.088 41.667 0.00 0.00 44.09 3.21
993 998 5.330455 GACAGTCAGTCTCCATTATCACA 57.670 43.478 0.00 0.00 44.09 3.58
1005 1010 3.612955 GCACTAACTCCTGACAGTCAGTC 60.613 52.174 25.88 3.97 42.80 3.51
1006 1011 2.297597 GCACTAACTCCTGACAGTCAGT 59.702 50.000 25.88 12.28 42.80 3.41
1007 1012 2.297315 TGCACTAACTCCTGACAGTCAG 59.703 50.000 22.14 22.14 43.91 3.51
1008 1013 2.316108 TGCACTAACTCCTGACAGTCA 58.684 47.619 2.48 2.48 0.00 3.41
1009 1014 3.060602 GTTGCACTAACTCCTGACAGTC 58.939 50.000 0.93 0.00 36.34 3.51
1010 1015 2.700897 AGTTGCACTAACTCCTGACAGT 59.299 45.455 0.93 0.00 46.55 3.55
1011 1016 3.393089 AGTTGCACTAACTCCTGACAG 57.607 47.619 0.00 0.00 46.55 3.51
1020 1025 3.125316 GTGTATGCCAGAGTTGCACTAAC 59.875 47.826 0.00 0.00 42.38 2.34
1021 1026 3.334691 GTGTATGCCAGAGTTGCACTAA 58.665 45.455 0.00 0.00 42.38 2.24
1022 1027 2.673893 CGTGTATGCCAGAGTTGCACTA 60.674 50.000 0.00 0.00 42.38 2.74
1023 1028 1.813513 GTGTATGCCAGAGTTGCACT 58.186 50.000 0.00 0.00 42.38 4.40
1024 1029 0.443869 CGTGTATGCCAGAGTTGCAC 59.556 55.000 0.00 0.00 42.38 4.57
1025 1030 1.298157 GCGTGTATGCCAGAGTTGCA 61.298 55.000 0.00 0.00 43.97 4.08
1026 1031 1.425428 GCGTGTATGCCAGAGTTGC 59.575 57.895 0.00 0.00 0.00 4.17
1035 1040 0.165944 GTGAGTTGTGGCGTGTATGC 59.834 55.000 0.00 0.00 0.00 3.14
1036 1041 0.438445 CGTGAGTTGTGGCGTGTATG 59.562 55.000 0.00 0.00 0.00 2.39
1037 1042 0.032952 ACGTGAGTTGTGGCGTGTAT 59.967 50.000 0.00 0.00 46.40 2.29
1038 1043 1.438399 ACGTGAGTTGTGGCGTGTA 59.562 52.632 0.00 0.00 46.40 2.90
1039 1044 2.185867 ACGTGAGTTGTGGCGTGT 59.814 55.556 0.00 0.00 46.40 4.49
1050 1055 1.557443 GAGCCACAACCGAACGTGAG 61.557 60.000 0.00 0.00 35.02 3.51
1051 1056 1.593209 GAGCCACAACCGAACGTGA 60.593 57.895 0.00 0.00 35.02 4.35
1052 1057 2.604174 GGAGCCACAACCGAACGTG 61.604 63.158 0.00 0.00 0.00 4.49
1053 1058 1.466025 TAGGAGCCACAACCGAACGT 61.466 55.000 0.00 0.00 0.00 3.99
1054 1059 0.108329 ATAGGAGCCACAACCGAACG 60.108 55.000 0.00 0.00 0.00 3.95
1055 1060 1.653151 GATAGGAGCCACAACCGAAC 58.347 55.000 0.00 0.00 0.00 3.95
1056 1061 0.539986 GGATAGGAGCCACAACCGAA 59.460 55.000 0.00 0.00 0.00 4.30
1057 1062 0.325296 AGGATAGGAGCCACAACCGA 60.325 55.000 0.00 0.00 0.00 4.69
1058 1063 1.341531 CTAGGATAGGAGCCACAACCG 59.658 57.143 0.00 0.00 34.22 4.44
1059 1064 2.679082 TCTAGGATAGGAGCCACAACC 58.321 52.381 0.00 0.00 39.78 3.77
1060 1065 3.898123 TCATCTAGGATAGGAGCCACAAC 59.102 47.826 0.00 0.00 39.78 3.32
1061 1066 4.199002 TCATCTAGGATAGGAGCCACAA 57.801 45.455 0.00 0.00 39.78 3.33
1062 1067 3.903530 TCATCTAGGATAGGAGCCACA 57.096 47.619 0.00 0.00 39.78 4.17
1063 1068 5.753721 ATTTCATCTAGGATAGGAGCCAC 57.246 43.478 0.00 0.00 39.78 5.01
1064 1069 6.805150 TCTATTTCATCTAGGATAGGAGCCA 58.195 40.000 0.00 0.00 39.78 4.75
1065 1070 7.617723 TCTTCTATTTCATCTAGGATAGGAGCC 59.382 40.741 0.00 0.00 39.78 4.70
1066 1071 8.588290 TCTTCTATTTCATCTAGGATAGGAGC 57.412 38.462 0.00 0.00 39.78 4.70
1067 1072 8.686334 GCTCTTCTATTTCATCTAGGATAGGAG 58.314 40.741 0.00 0.00 39.78 3.69
1068 1073 8.397957 AGCTCTTCTATTTCATCTAGGATAGGA 58.602 37.037 0.00 0.00 39.78 2.94
1069 1074 8.593945 AGCTCTTCTATTTCATCTAGGATAGG 57.406 38.462 0.00 0.00 39.78 2.57
1072 1077 9.600432 ACTAAGCTCTTCTATTTCATCTAGGAT 57.400 33.333 0.00 0.00 0.00 3.24
1073 1078 9.427821 AACTAAGCTCTTCTATTTCATCTAGGA 57.572 33.333 0.00 0.00 0.00 2.94
1074 1079 9.474920 CAACTAAGCTCTTCTATTTCATCTAGG 57.525 37.037 0.00 0.00 0.00 3.02
1076 1081 9.809096 CACAACTAAGCTCTTCTATTTCATCTA 57.191 33.333 0.00 0.00 0.00 1.98
1077 1082 8.535335 TCACAACTAAGCTCTTCTATTTCATCT 58.465 33.333 0.00 0.00 0.00 2.90
1078 1083 8.709386 TCACAACTAAGCTCTTCTATTTCATC 57.291 34.615 0.00 0.00 0.00 2.92
1079 1084 9.678260 AATCACAACTAAGCTCTTCTATTTCAT 57.322 29.630 0.00 0.00 0.00 2.57
1080 1085 9.507329 AAATCACAACTAAGCTCTTCTATTTCA 57.493 29.630 0.00 0.00 0.00 2.69
1084 1089 9.732130 AGAAAAATCACAACTAAGCTCTTCTAT 57.268 29.630 0.00 0.00 0.00 1.98
1085 1090 8.993121 CAGAAAAATCACAACTAAGCTCTTCTA 58.007 33.333 0.00 0.00 0.00 2.10
1086 1091 7.500559 ACAGAAAAATCACAACTAAGCTCTTCT 59.499 33.333 0.00 0.00 0.00 2.85
1087 1092 7.643579 ACAGAAAAATCACAACTAAGCTCTTC 58.356 34.615 0.00 0.00 0.00 2.87
1088 1093 7.573968 ACAGAAAAATCACAACTAAGCTCTT 57.426 32.000 0.00 0.00 0.00 2.85
1089 1094 7.573968 AACAGAAAAATCACAACTAAGCTCT 57.426 32.000 0.00 0.00 0.00 4.09
1090 1095 8.634475 AAAACAGAAAAATCACAACTAAGCTC 57.366 30.769 0.00 0.00 0.00 4.09
1091 1096 8.872845 CAAAAACAGAAAAATCACAACTAAGCT 58.127 29.630 0.00 0.00 0.00 3.74
1092 1097 8.868916 TCAAAAACAGAAAAATCACAACTAAGC 58.131 29.630 0.00 0.00 0.00 3.09
1096 1101 9.657419 AATCTCAAAAACAGAAAAATCACAACT 57.343 25.926 0.00 0.00 0.00 3.16
1097 1102 9.906111 GAATCTCAAAAACAGAAAAATCACAAC 57.094 29.630 0.00 0.00 0.00 3.32
1098 1103 9.650539 TGAATCTCAAAAACAGAAAAATCACAA 57.349 25.926 0.00 0.00 0.00 3.33
1099 1104 9.650539 TTGAATCTCAAAAACAGAAAAATCACA 57.349 25.926 0.00 0.00 32.71 3.58
1100 1105 9.906111 GTTGAATCTCAAAAACAGAAAAATCAC 57.094 29.630 0.00 0.00 38.22 3.06
1101 1106 9.650539 TGTTGAATCTCAAAAACAGAAAAATCA 57.349 25.926 0.00 0.00 38.22 2.57
1104 1109 9.434420 ACATGTTGAATCTCAAAAACAGAAAAA 57.566 25.926 0.00 0.00 38.22 1.94
1106 1111 9.734620 CTACATGTTGAATCTCAAAAACAGAAA 57.265 29.630 2.30 0.00 38.22 2.52
1107 1112 8.902806 ACTACATGTTGAATCTCAAAAACAGAA 58.097 29.630 14.37 0.00 38.22 3.02
1108 1113 8.450578 ACTACATGTTGAATCTCAAAAACAGA 57.549 30.769 14.37 0.00 38.22 3.41
1111 1116 9.612620 CCTTACTACATGTTGAATCTCAAAAAC 57.387 33.333 14.37 0.00 38.22 2.43
1112 1117 9.349713 ACCTTACTACATGTTGAATCTCAAAAA 57.650 29.630 14.37 0.00 38.22 1.94
1113 1118 8.918202 ACCTTACTACATGTTGAATCTCAAAA 57.082 30.769 14.37 0.00 38.22 2.44
1114 1119 8.154203 TGACCTTACTACATGTTGAATCTCAAA 58.846 33.333 14.37 0.00 38.22 2.69
1115 1120 7.676004 TGACCTTACTACATGTTGAATCTCAA 58.324 34.615 14.37 0.00 33.32 3.02
1116 1121 7.239763 TGACCTTACTACATGTTGAATCTCA 57.760 36.000 14.37 5.16 0.00 3.27
1117 1122 6.256757 GCTGACCTTACTACATGTTGAATCTC 59.743 42.308 14.37 2.89 0.00 2.75
1118 1123 6.109359 GCTGACCTTACTACATGTTGAATCT 58.891 40.000 14.37 0.00 0.00 2.40
1119 1124 5.874810 TGCTGACCTTACTACATGTTGAATC 59.125 40.000 14.37 4.66 0.00 2.52
1120 1125 5.804639 TGCTGACCTTACTACATGTTGAAT 58.195 37.500 14.37 0.00 0.00 2.57
1121 1126 5.222079 TGCTGACCTTACTACATGTTGAA 57.778 39.130 14.37 3.66 0.00 2.69
1122 1127 4.882842 TGCTGACCTTACTACATGTTGA 57.117 40.909 14.37 0.00 0.00 3.18
1123 1128 5.470098 AGTTTGCTGACCTTACTACATGTTG 59.530 40.000 2.30 4.29 0.00 3.33
1124 1129 5.621193 AGTTTGCTGACCTTACTACATGTT 58.379 37.500 2.30 0.00 0.00 2.71
1125 1130 5.228945 AGTTTGCTGACCTTACTACATGT 57.771 39.130 2.69 2.69 0.00 3.21
1126 1131 6.092259 GGTAAGTTTGCTGACCTTACTACATG 59.908 42.308 0.00 0.00 42.09 3.21
1127 1132 6.171213 GGTAAGTTTGCTGACCTTACTACAT 58.829 40.000 0.00 0.00 42.09 2.29
1128 1133 5.544650 GGTAAGTTTGCTGACCTTACTACA 58.455 41.667 0.00 0.00 42.09 2.74
1129 1134 4.624452 CGGTAAGTTTGCTGACCTTACTAC 59.376 45.833 0.00 0.00 42.99 2.73
1130 1135 4.322198 CCGGTAAGTTTGCTGACCTTACTA 60.322 45.833 0.00 0.00 42.99 1.82
1131 1136 3.556423 CCGGTAAGTTTGCTGACCTTACT 60.556 47.826 0.00 0.00 42.99 2.24
1132 1137 2.740447 CCGGTAAGTTTGCTGACCTTAC 59.260 50.000 0.00 0.00 42.99 2.34
1133 1138 2.872842 GCCGGTAAGTTTGCTGACCTTA 60.873 50.000 1.90 0.00 42.99 2.69
1134 1139 1.892209 CCGGTAAGTTTGCTGACCTT 58.108 50.000 0.00 0.00 42.99 3.50
1135 1140 0.605589 GCCGGTAAGTTTGCTGACCT 60.606 55.000 1.90 0.00 42.99 3.85
1136 1141 0.887387 TGCCGGTAAGTTTGCTGACC 60.887 55.000 1.90 0.00 41.95 4.02
1137 1142 0.237498 GTGCCGGTAAGTTTGCTGAC 59.763 55.000 1.90 0.00 0.00 3.51
1138 1143 0.179043 TGTGCCGGTAAGTTTGCTGA 60.179 50.000 1.90 0.00 0.00 4.26
1139 1144 0.881118 ATGTGCCGGTAAGTTTGCTG 59.119 50.000 1.90 0.00 0.00 4.41
1140 1145 1.165270 GATGTGCCGGTAAGTTTGCT 58.835 50.000 1.90 0.00 0.00 3.91
1141 1146 1.165270 AGATGTGCCGGTAAGTTTGC 58.835 50.000 1.90 0.00 0.00 3.68
1142 1147 3.938963 ACATAGATGTGCCGGTAAGTTTG 59.061 43.478 1.90 0.00 40.03 2.93
1143 1148 4.216411 ACATAGATGTGCCGGTAAGTTT 57.784 40.909 1.90 0.00 40.03 2.66
1144 1149 3.906720 ACATAGATGTGCCGGTAAGTT 57.093 42.857 1.90 0.00 40.03 2.66
1180 1185 4.321156 CCAACATTCGGTCACATTCAATGT 60.321 41.667 0.00 0.00 46.22 2.71
1181 1186 4.168014 CCAACATTCGGTCACATTCAATG 58.832 43.478 0.00 0.00 0.00 2.82
1182 1187 3.367292 GCCAACATTCGGTCACATTCAAT 60.367 43.478 0.00 0.00 0.00 2.57
1183 1188 2.030363 GCCAACATTCGGTCACATTCAA 60.030 45.455 0.00 0.00 0.00 2.69
1184 1189 1.539388 GCCAACATTCGGTCACATTCA 59.461 47.619 0.00 0.00 0.00 2.57
1185 1190 1.812571 AGCCAACATTCGGTCACATTC 59.187 47.619 0.00 0.00 0.00 2.67
1186 1191 1.909700 AGCCAACATTCGGTCACATT 58.090 45.000 0.00 0.00 0.00 2.71
1187 1192 2.236146 TCTAGCCAACATTCGGTCACAT 59.764 45.455 0.00 0.00 0.00 3.21
1188 1193 1.621317 TCTAGCCAACATTCGGTCACA 59.379 47.619 0.00 0.00 0.00 3.58
1189 1194 2.271800 CTCTAGCCAACATTCGGTCAC 58.728 52.381 0.00 0.00 0.00 3.67
1190 1195 1.207089 CCTCTAGCCAACATTCGGTCA 59.793 52.381 0.00 0.00 0.00 4.02
1191 1196 1.480954 TCCTCTAGCCAACATTCGGTC 59.519 52.381 0.00 0.00 0.00 4.79
1192 1197 1.482593 CTCCTCTAGCCAACATTCGGT 59.517 52.381 0.00 0.00 0.00 4.69
1193 1198 1.757118 TCTCCTCTAGCCAACATTCGG 59.243 52.381 0.00 0.00 0.00 4.30
1194 1199 2.482142 GGTCTCCTCTAGCCAACATTCG 60.482 54.545 0.00 0.00 0.00 3.34
1195 1200 2.158885 GGGTCTCCTCTAGCCAACATTC 60.159 54.545 0.00 0.00 34.56 2.67
1196 1201 1.840635 GGGTCTCCTCTAGCCAACATT 59.159 52.381 0.00 0.00 34.56 2.71
1197 1202 1.501582 GGGTCTCCTCTAGCCAACAT 58.498 55.000 0.00 0.00 34.56 2.71
1198 1203 0.617820 GGGGTCTCCTCTAGCCAACA 60.618 60.000 0.00 0.00 36.18 3.33
1199 1204 0.325765 AGGGGTCTCCTCTAGCCAAC 60.326 60.000 0.00 0.00 44.06 3.77
1200 1205 1.218196 CTAGGGGTCTCCTCTAGCCAA 59.782 57.143 9.40 0.00 44.06 4.52
1201 1206 0.854218 CTAGGGGTCTCCTCTAGCCA 59.146 60.000 9.40 0.00 44.06 4.75
1202 1207 0.854908 ACTAGGGGTCTCCTCTAGCC 59.145 60.000 19.13 0.00 44.06 3.93
1203 1208 2.759839 AACTAGGGGTCTCCTCTAGC 57.240 55.000 19.13 0.00 44.06 3.42
1243 1248 3.140814 GTTCCCCGGGCAATCAGC 61.141 66.667 17.73 0.00 44.65 4.26
1244 1249 2.046285 GTGTTCCCCGGGCAATCAG 61.046 63.158 17.73 0.00 0.00 2.90
1245 1250 2.034999 GTGTTCCCCGGGCAATCA 59.965 61.111 17.73 5.01 0.00 2.57
1246 1251 0.898326 AAAGTGTTCCCCGGGCAATC 60.898 55.000 17.73 4.39 0.00 2.67
1247 1252 0.471022 AAAAGTGTTCCCCGGGCAAT 60.471 50.000 17.73 3.90 0.00 3.56
1248 1253 1.075896 AAAAGTGTTCCCCGGGCAA 60.076 52.632 17.73 2.45 0.00 4.52
1249 1254 1.830408 CAAAAGTGTTCCCCGGGCA 60.830 57.895 17.73 4.73 0.00 5.36
1250 1255 1.396607 AACAAAAGTGTTCCCCGGGC 61.397 55.000 17.73 1.24 45.00 6.13
1251 1256 0.387565 CAACAAAAGTGTTCCCCGGG 59.612 55.000 15.80 15.80 45.00 5.73
1252 1257 1.394618 TCAACAAAAGTGTTCCCCGG 58.605 50.000 0.00 0.00 45.00 5.73
1253 1258 3.726291 ATTCAACAAAAGTGTTCCCCG 57.274 42.857 0.00 0.00 45.00 5.73
1254 1259 5.465390 GCTTTATTCAACAAAAGTGTTCCCC 59.535 40.000 0.00 0.00 45.00 4.81
1255 1260 6.280643 AGCTTTATTCAACAAAAGTGTTCCC 58.719 36.000 0.00 0.00 45.00 3.97
1256 1261 7.203218 AGAGCTTTATTCAACAAAAGTGTTCC 58.797 34.615 0.00 0.00 45.00 3.62
1257 1262 8.131731 AGAGAGCTTTATTCAACAAAAGTGTTC 58.868 33.333 0.00 0.00 45.00 3.18
1259 1264 7.283127 TCAGAGAGCTTTATTCAACAAAAGTGT 59.717 33.333 0.00 0.00 40.75 3.55
1260 1265 7.642669 TCAGAGAGCTTTATTCAACAAAAGTG 58.357 34.615 0.00 0.00 35.56 3.16
1261 1266 7.807977 TCAGAGAGCTTTATTCAACAAAAGT 57.192 32.000 0.00 0.00 35.56 2.66
1262 1267 9.688592 AAATCAGAGAGCTTTATTCAACAAAAG 57.311 29.630 0.00 0.00 36.09 2.27
1263 1268 9.467258 CAAATCAGAGAGCTTTATTCAACAAAA 57.533 29.630 0.00 0.00 0.00 2.44
1264 1269 7.596248 GCAAATCAGAGAGCTTTATTCAACAAA 59.404 33.333 0.00 0.00 0.00 2.83
1265 1270 7.086376 GCAAATCAGAGAGCTTTATTCAACAA 58.914 34.615 0.00 0.00 0.00 2.83
1266 1271 6.349611 GGCAAATCAGAGAGCTTTATTCAACA 60.350 38.462 0.00 0.00 0.00 3.33
1267 1272 6.032717 GGCAAATCAGAGAGCTTTATTCAAC 58.967 40.000 0.00 0.00 0.00 3.18
1268 1273 5.126061 GGGCAAATCAGAGAGCTTTATTCAA 59.874 40.000 0.00 0.00 0.00 2.69
1269 1274 4.641989 GGGCAAATCAGAGAGCTTTATTCA 59.358 41.667 0.00 0.00 0.00 2.57
1270 1275 4.260948 CGGGCAAATCAGAGAGCTTTATTC 60.261 45.833 0.00 0.00 0.00 1.75
1271 1276 3.629398 CGGGCAAATCAGAGAGCTTTATT 59.371 43.478 0.00 0.00 0.00 1.40
1272 1277 3.209410 CGGGCAAATCAGAGAGCTTTAT 58.791 45.455 0.00 0.00 0.00 1.40
1273 1278 2.632377 CGGGCAAATCAGAGAGCTTTA 58.368 47.619 0.00 0.00 0.00 1.85
1274 1279 1.457346 CGGGCAAATCAGAGAGCTTT 58.543 50.000 0.00 0.00 0.00 3.51
1275 1280 1.028868 GCGGGCAAATCAGAGAGCTT 61.029 55.000 0.00 0.00 0.00 3.74
1276 1281 1.451028 GCGGGCAAATCAGAGAGCT 60.451 57.895 0.00 0.00 0.00 4.09
1277 1282 1.308069 TTGCGGGCAAATCAGAGAGC 61.308 55.000 3.16 0.00 32.44 4.09
1278 1283 1.167851 TTTGCGGGCAAATCAGAGAG 58.832 50.000 14.35 0.00 40.51 3.20
1279 1284 1.614996 TTTTGCGGGCAAATCAGAGA 58.385 45.000 18.43 1.13 44.14 3.10
1280 1285 2.437200 TTTTTGCGGGCAAATCAGAG 57.563 45.000 18.43 0.00 44.14 3.35
1297 1302 6.128090 GCGTAATAAGGAGGCACTTACTTTTT 60.128 38.462 4.17 0.00 41.55 1.94
1298 1303 5.353400 GCGTAATAAGGAGGCACTTACTTTT 59.647 40.000 4.17 0.00 41.55 2.27
1299 1304 4.874396 GCGTAATAAGGAGGCACTTACTTT 59.126 41.667 4.17 0.27 41.55 2.66
1300 1305 4.439968 GCGTAATAAGGAGGCACTTACTT 58.560 43.478 4.17 0.00 41.55 2.24
1301 1306 3.490419 CGCGTAATAAGGAGGCACTTACT 60.490 47.826 0.00 0.00 41.55 2.24
1302 1307 2.793232 CGCGTAATAAGGAGGCACTTAC 59.207 50.000 0.00 0.00 41.55 2.34
1303 1308 2.223876 CCGCGTAATAAGGAGGCACTTA 60.224 50.000 4.92 4.50 41.55 2.24
1304 1309 1.472728 CCGCGTAATAAGGAGGCACTT 60.473 52.381 4.92 0.27 41.55 3.16
1306 1311 0.103572 TCCGCGTAATAAGGAGGCAC 59.896 55.000 4.92 0.00 31.27 5.01
1307 1312 0.825410 TTCCGCGTAATAAGGAGGCA 59.175 50.000 4.92 0.00 35.23 4.75
1308 1313 1.944032 TTTCCGCGTAATAAGGAGGC 58.056 50.000 4.92 0.00 35.23 4.70
1309 1314 6.425721 TCATTATTTTCCGCGTAATAAGGAGG 59.574 38.462 19.60 11.78 34.19 4.30
1310 1315 7.416154 TCATTATTTTCCGCGTAATAAGGAG 57.584 36.000 19.60 13.49 34.19 3.69
1311 1316 7.972832 ATCATTATTTTCCGCGTAATAAGGA 57.027 32.000 22.81 22.81 39.69 3.36
1312 1317 7.749126 GGAATCATTATTTTCCGCGTAATAAGG 59.251 37.037 16.97 16.97 32.65 2.69
1313 1318 8.504005 AGGAATCATTATTTTCCGCGTAATAAG 58.496 33.333 17.42 12.20 44.99 1.73
1314 1319 8.385898 AGGAATCATTATTTTCCGCGTAATAA 57.614 30.769 4.92 12.28 44.99 1.40
1315 1320 7.118680 GGAGGAATCATTATTTTCCGCGTAATA 59.881 37.037 4.92 3.44 44.99 0.98
1316 1321 6.072673 GGAGGAATCATTATTTTCCGCGTAAT 60.073 38.462 4.92 4.47 44.99 1.89
1317 1322 5.237779 GGAGGAATCATTATTTTCCGCGTAA 59.762 40.000 4.92 0.00 44.99 3.18
1318 1323 4.753107 GGAGGAATCATTATTTTCCGCGTA 59.247 41.667 4.92 0.00 44.99 4.42
1319 1324 3.564225 GGAGGAATCATTATTTTCCGCGT 59.436 43.478 4.92 0.00 44.99 6.01
1320 1325 3.563808 TGGAGGAATCATTATTTTCCGCG 59.436 43.478 0.00 0.00 44.99 6.46
1321 1326 5.067805 AGTTGGAGGAATCATTATTTTCCGC 59.932 40.000 0.00 0.00 44.99 5.54
1322 1327 6.318648 TCAGTTGGAGGAATCATTATTTTCCG 59.681 38.462 0.00 0.00 44.99 4.30
1323 1328 7.484140 GTCAGTTGGAGGAATCATTATTTTCC 58.516 38.462 0.00 0.00 41.46 3.13
1324 1329 7.189512 CGTCAGTTGGAGGAATCATTATTTTC 58.810 38.462 0.00 0.00 33.18 2.29
1325 1330 6.095440 CCGTCAGTTGGAGGAATCATTATTTT 59.905 38.462 0.00 0.00 33.18 1.82
1326 1331 5.590259 CCGTCAGTTGGAGGAATCATTATTT 59.410 40.000 0.00 0.00 33.18 1.40
1327 1332 5.126067 CCGTCAGTTGGAGGAATCATTATT 58.874 41.667 0.00 0.00 33.18 1.40
1328 1333 4.164221 ACCGTCAGTTGGAGGAATCATTAT 59.836 41.667 1.86 0.00 33.18 1.28
1329 1334 3.517901 ACCGTCAGTTGGAGGAATCATTA 59.482 43.478 1.86 0.00 33.18 1.90
1330 1335 2.305927 ACCGTCAGTTGGAGGAATCATT 59.694 45.455 1.86 0.00 33.18 2.57
1331 1336 1.909302 ACCGTCAGTTGGAGGAATCAT 59.091 47.619 1.86 0.00 33.18 2.45
1332 1337 1.348064 ACCGTCAGTTGGAGGAATCA 58.652 50.000 1.86 0.00 33.18 2.57
1333 1338 2.159085 CCTACCGTCAGTTGGAGGAATC 60.159 54.545 0.00 0.00 43.39 2.52
1334 1339 1.831736 CCTACCGTCAGTTGGAGGAAT 59.168 52.381 0.00 0.00 43.39 3.01
1335 1340 1.263356 CCTACCGTCAGTTGGAGGAA 58.737 55.000 0.00 0.00 43.39 3.36
1336 1341 0.613853 CCCTACCGTCAGTTGGAGGA 60.614 60.000 0.00 0.00 43.39 3.71
1337 1342 0.613853 TCCCTACCGTCAGTTGGAGG 60.614 60.000 0.00 0.00 43.39 4.30
1338 1343 0.531200 GTCCCTACCGTCAGTTGGAG 59.469 60.000 0.00 0.00 43.39 3.86
1339 1344 0.901580 GGTCCCTACCGTCAGTTGGA 60.902 60.000 0.00 0.00 43.39 3.53
1340 1345 1.595357 GGTCCCTACCGTCAGTTGG 59.405 63.158 0.00 0.00 40.70 3.77
1349 1354 2.356780 CGTCCAGTGGGTCCCTACC 61.357 68.421 9.92 0.00 45.97 3.18
1350 1355 2.356780 CCGTCCAGTGGGTCCCTAC 61.357 68.421 9.92 5.94 34.93 3.18
1351 1356 2.038329 CCGTCCAGTGGGTCCCTA 59.962 66.667 9.92 0.00 34.93 3.53
1404 1409 4.729918 GTGGGTCCCAGCAGCCAG 62.730 72.222 12.21 0.00 44.68 4.85
1411 1416 3.706373 CCGTCAGGTGGGTCCCAG 61.706 72.222 12.21 0.00 32.34 4.45
1418 1423 4.838152 CGATGGCCCGTCAGGTGG 62.838 72.222 0.00 0.00 38.26 4.61
1419 1424 2.028125 ATACGATGGCCCGTCAGGTG 62.028 60.000 10.48 0.00 43.20 4.00
1420 1425 1.335132 AATACGATGGCCCGTCAGGT 61.335 55.000 10.48 1.33 43.20 4.00
1421 1426 0.179056 AAATACGATGGCCCGTCAGG 60.179 55.000 10.48 0.00 43.20 3.86
1422 1427 1.217882 GAAATACGATGGCCCGTCAG 58.782 55.000 10.48 3.48 43.20 3.51
1423 1428 0.537653 TGAAATACGATGGCCCGTCA 59.462 50.000 10.48 0.28 43.20 4.35
1424 1429 0.935196 GTGAAATACGATGGCCCGTC 59.065 55.000 10.48 2.66 43.20 4.79
1425 1430 0.250793 TGTGAAATACGATGGCCCGT 59.749 50.000 11.84 11.84 45.54 5.28
1426 1431 1.374560 TTGTGAAATACGATGGCCCG 58.625 50.000 0.00 0.00 0.00 6.13
1427 1432 3.859411 TTTTGTGAAATACGATGGCCC 57.141 42.857 0.00 0.00 0.00 5.80
2003 2008 3.480679 CTGTGGTGTGAGGCTGCCA 62.481 63.158 22.65 0.00 0.00 4.92
2089 2094 1.459730 GGCCTAGGAAGGGGACGAT 60.460 63.158 14.75 0.00 43.87 3.73
2176 2181 4.338012 TCTCCACGTACAATACTCTTCCA 58.662 43.478 0.00 0.00 0.00 3.53
2203 2208 4.643387 GCCGTGGACCCAGCTGTT 62.643 66.667 13.81 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.