Multiple sequence alignment - TraesCS3B01G060200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G060200 chr3B 100.000 3089 0 0 1 3089 31982277 31985365 0.000000e+00 5705.0
1 TraesCS3B01G060200 chr3B 95.288 1252 57 2 888 2138 11469468 11470718 0.000000e+00 1984.0
2 TraesCS3B01G060200 chr3B 88.832 591 65 1 1505 2095 11114282 11113693 0.000000e+00 725.0
3 TraesCS3B01G060200 chr3B 90.443 429 39 2 2240 2668 11470767 11471193 5.780000e-157 564.0
4 TraesCS3B01G060200 chr3B 92.819 376 25 2 2698 3071 11471190 11471565 7.530000e-151 544.0
5 TraesCS3B01G060200 chr3D 92.863 2424 131 19 662 3071 9121660 9124055 0.000000e+00 3480.0
6 TraesCS3B01G060200 chr3D 87.692 585 66 3 1505 2089 9066965 9066387 0.000000e+00 676.0
7 TraesCS3B01G060200 chr3D 82.840 169 25 2 496 661 221045754 221045587 6.900000e-32 148.0
8 TraesCS3B01G060200 chr3A 85.364 1756 179 36 958 2668 11873348 11871626 0.000000e+00 1748.0
9 TraesCS3B01G060200 chr3A 89.456 588 62 0 1502 2089 12117724 12117137 0.000000e+00 743.0
10 TraesCS3B01G060200 chr3A 87.793 598 62 8 1502 2089 11921129 11921725 0.000000e+00 689.0
11 TraesCS3B01G060200 chr3A 93.867 375 22 1 2698 3071 11871629 11871255 5.780000e-157 564.0
12 TraesCS3B01G060200 chr3A 79.341 668 98 22 5 661 105005806 105005168 1.700000e-117 433.0
13 TraesCS3B01G060200 chr3A 82.241 473 53 11 809 1279 11920484 11920927 2.250000e-101 379.0
14 TraesCS3B01G060200 chr3A 88.571 175 16 2 963 1133 11933207 11933381 3.120000e-50 209.0
15 TraesCS3B01G060200 chr1B 92.138 407 30 2 4 408 444343201 444343607 9.610000e-160 573.0
16 TraesCS3B01G060200 chr1B 92.188 384 28 2 4 386 616911409 616911027 2.710000e-150 542.0
17 TraesCS3B01G060200 chr1B 89.252 214 22 1 455 667 444343945 444344158 1.830000e-67 267.0
18 TraesCS3B01G060200 chr1B 91.875 160 13 0 502 661 616910695 616910536 1.110000e-54 224.0
19 TraesCS3B01G060200 chr7B 87.052 363 28 11 2698 3059 62677178 62677522 2.890000e-105 392.0
20 TraesCS3B01G060200 chr7B 82.286 175 28 2 490 664 229819778 229819607 6.900000e-32 148.0
21 TraesCS3B01G060200 chr7B 88.034 117 14 0 1060 1176 690904523 690904639 4.150000e-29 139.0
22 TraesCS3B01G060200 chr5A 78.151 595 118 10 1497 2088 37401784 37401199 4.870000e-98 368.0
23 TraesCS3B01G060200 chr5A 78.221 551 108 8 1541 2088 37193846 37193305 2.950000e-90 342.0
24 TraesCS3B01G060200 chr6D 85.938 192 26 1 4 194 286806310 286806501 1.450000e-48 204.0
25 TraesCS3B01G060200 chr2A 86.207 174 20 3 490 662 115438847 115438677 5.260000e-43 185.0
26 TraesCS3B01G060200 chr6A 82.653 196 23 5 290 482 520666908 520666721 2.460000e-36 163.0
27 TraesCS3B01G060200 chr4B 73.849 543 77 36 4 527 454304696 454305192 4.120000e-34 156.0
28 TraesCS3B01G060200 chr4B 80.814 172 32 1 490 661 215919427 215919257 1.930000e-27 134.0
29 TraesCS3B01G060200 chr4D 81.977 172 30 1 490 661 169121930 169122100 8.930000e-31 145.0
30 TraesCS3B01G060200 chr2B 85.507 138 20 0 1046 1183 763449599 763449462 8.930000e-31 145.0
31 TraesCS3B01G060200 chr2B 82.667 150 26 0 1032 1181 762957759 762957610 1.930000e-27 134.0
32 TraesCS3B01G060200 chr2D 82.979 141 24 0 1046 1186 621589995 621589855 8.990000e-26 128.0
33 TraesCS3B01G060200 chr2D 80.620 129 16 5 4 132 306296065 306296184 1.180000e-14 91.6
34 TraesCS3B01G060200 chr5B 90.476 63 6 0 575 637 595056703 595056765 1.970000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G060200 chr3B 31982277 31985365 3088 False 5705.000000 5705 100.0000 1 3089 1 chr3B.!!$F1 3088
1 TraesCS3B01G060200 chr3B 11469468 11471565 2097 False 1030.666667 1984 92.8500 888 3071 3 chr3B.!!$F2 2183
2 TraesCS3B01G060200 chr3B 11113693 11114282 589 True 725.000000 725 88.8320 1505 2095 1 chr3B.!!$R1 590
3 TraesCS3B01G060200 chr3D 9121660 9124055 2395 False 3480.000000 3480 92.8630 662 3071 1 chr3D.!!$F1 2409
4 TraesCS3B01G060200 chr3D 9066387 9066965 578 True 676.000000 676 87.6920 1505 2089 1 chr3D.!!$R1 584
5 TraesCS3B01G060200 chr3A 11871255 11873348 2093 True 1156.000000 1748 89.6155 958 3071 2 chr3A.!!$R3 2113
6 TraesCS3B01G060200 chr3A 12117137 12117724 587 True 743.000000 743 89.4560 1502 2089 1 chr3A.!!$R1 587
7 TraesCS3B01G060200 chr3A 11920484 11921725 1241 False 534.000000 689 85.0170 809 2089 2 chr3A.!!$F2 1280
8 TraesCS3B01G060200 chr3A 105005168 105005806 638 True 433.000000 433 79.3410 5 661 1 chr3A.!!$R2 656
9 TraesCS3B01G060200 chr1B 444343201 444344158 957 False 420.000000 573 90.6950 4 667 2 chr1B.!!$F1 663
10 TraesCS3B01G060200 chr1B 616910536 616911409 873 True 383.000000 542 92.0315 4 661 2 chr1B.!!$R1 657
11 TraesCS3B01G060200 chr5A 37401199 37401784 585 True 368.000000 368 78.1510 1497 2088 1 chr5A.!!$R2 591
12 TraesCS3B01G060200 chr5A 37193305 37193846 541 True 342.000000 342 78.2210 1541 2088 1 chr5A.!!$R1 547

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
432 433 0.035458 CCGGATAGTGGGAGCATTCC 59.965 60.0 0.0 0.0 43.23 3.01 F
852 857 0.036388 GCCAAGATGTCCGGTTGAGA 60.036 55.0 0.0 0.0 0.00 3.27 F
1904 2448 0.389948 GAAGTTGAGACCGTGGCGAT 60.390 55.0 0.0 0.0 0.00 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1904 2448 0.178767 ATCAGCTAGCGCCAATGTCA 59.821 50.0 9.55 0.0 36.6 3.58 R
2063 2636 0.685097 TTTGCGAGACTTGGTAGCCT 59.315 50.0 0.00 0.0 0.0 4.58 R
2740 3364 1.084935 AAAACCAACAAAACCGCCGC 61.085 50.0 0.00 0.0 0.0 6.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
79 80 2.496817 CGCCGGGAGAGAGGAAAG 59.503 66.667 2.18 0.00 0.00 2.62
82 83 1.001760 CCGGGAGAGAGGAAAGGGA 59.998 63.158 0.00 0.00 0.00 4.20
83 84 1.045911 CCGGGAGAGAGGAAAGGGAG 61.046 65.000 0.00 0.00 0.00 4.30
84 85 1.045911 CGGGAGAGAGGAAAGGGAGG 61.046 65.000 0.00 0.00 0.00 4.30
85 86 0.340208 GGGAGAGAGGAAAGGGAGGA 59.660 60.000 0.00 0.00 0.00 3.71
86 87 1.691163 GGGAGAGAGGAAAGGGAGGAG 60.691 61.905 0.00 0.00 0.00 3.69
87 88 1.289530 GGAGAGAGGAAAGGGAGGAGA 59.710 57.143 0.00 0.00 0.00 3.71
88 89 2.292587 GGAGAGAGGAAAGGGAGGAGAA 60.293 54.545 0.00 0.00 0.00 2.87
89 90 3.031013 GAGAGAGGAAAGGGAGGAGAAG 58.969 54.545 0.00 0.00 0.00 2.85
90 91 2.115427 GAGAGGAAAGGGAGGAGAAGG 58.885 57.143 0.00 0.00 0.00 3.46
91 92 1.208706 GAGGAAAGGGAGGAGAAGGG 58.791 60.000 0.00 0.00 0.00 3.95
92 93 0.253394 AGGAAAGGGAGGAGAAGGGG 60.253 60.000 0.00 0.00 0.00 4.79
93 94 1.282653 GGAAAGGGAGGAGAAGGGGG 61.283 65.000 0.00 0.00 0.00 5.40
94 95 0.253207 GAAAGGGAGGAGAAGGGGGA 60.253 60.000 0.00 0.00 0.00 4.81
95 96 0.253394 AAAGGGAGGAGAAGGGGGAG 60.253 60.000 0.00 0.00 0.00 4.30
96 97 2.770475 GGGAGGAGAAGGGGGAGC 60.770 72.222 0.00 0.00 0.00 4.70
97 98 2.770475 GGAGGAGAAGGGGGAGCC 60.770 72.222 0.00 0.00 0.00 4.70
98 99 2.770475 GAGGAGAAGGGGGAGCCC 60.770 72.222 0.00 0.00 44.51 5.19
121 122 3.902063 CGCCGTCGTCGCATTCAG 61.902 66.667 0.00 0.00 35.54 3.02
122 123 3.554692 GCCGTCGTCGCATTCAGG 61.555 66.667 0.00 0.00 35.54 3.86
123 124 3.554692 CCGTCGTCGCATTCAGGC 61.555 66.667 0.00 0.00 35.54 4.85
140 141 3.772560 CGCACGCGCACACACATA 61.773 61.111 5.73 0.00 38.40 2.29
141 142 2.202171 GCACGCGCACACACATAC 60.202 61.111 5.73 0.00 38.36 2.39
142 143 2.949030 GCACGCGCACACACATACA 61.949 57.895 5.73 0.00 38.36 2.29
143 144 1.130411 CACGCGCACACACATACAG 59.870 57.895 5.73 0.00 0.00 2.74
144 145 2.096406 CGCGCACACACATACAGC 59.904 61.111 8.75 0.00 0.00 4.40
145 146 2.666356 CGCGCACACACATACAGCA 61.666 57.895 8.75 0.00 0.00 4.41
146 147 1.796151 GCGCACACACATACAGCAT 59.204 52.632 0.30 0.00 0.00 3.79
147 148 0.521867 GCGCACACACATACAGCATG 60.522 55.000 0.30 0.00 46.00 4.06
161 162 2.242113 GCATGTGCTCCATCGATCC 58.758 57.895 0.00 0.00 38.21 3.36
162 163 0.533531 GCATGTGCTCCATCGATCCA 60.534 55.000 0.00 0.00 38.21 3.41
163 164 1.957668 CATGTGCTCCATCGATCCAA 58.042 50.000 0.00 0.00 0.00 3.53
164 165 2.501261 CATGTGCTCCATCGATCCAAT 58.499 47.619 0.00 0.00 0.00 3.16
165 166 1.957668 TGTGCTCCATCGATCCAATG 58.042 50.000 0.00 0.00 0.00 2.82
166 167 1.233019 GTGCTCCATCGATCCAATGG 58.767 55.000 13.36 13.36 44.27 3.16
167 168 0.535780 TGCTCCATCGATCCAATGGC 60.536 55.000 14.35 6.86 42.89 4.40
168 169 1.572085 GCTCCATCGATCCAATGGCG 61.572 60.000 14.35 10.75 42.89 5.69
169 170 1.572085 CTCCATCGATCCAATGGCGC 61.572 60.000 14.35 0.00 42.89 6.53
170 171 1.598962 CCATCGATCCAATGGCGCT 60.599 57.895 7.64 0.00 37.46 5.92
171 172 1.572941 CATCGATCCAATGGCGCTG 59.427 57.895 7.64 0.00 0.00 5.18
172 173 2.256591 ATCGATCCAATGGCGCTGC 61.257 57.895 7.64 0.00 0.00 5.25
207 208 4.011517 GGGGGACGCAACGAAGGA 62.012 66.667 0.00 0.00 42.57 3.36
208 209 2.434359 GGGGACGCAACGAAGGAG 60.434 66.667 0.00 0.00 0.00 3.69
209 210 2.654877 GGGACGCAACGAAGGAGA 59.345 61.111 0.00 0.00 0.00 3.71
210 211 1.446272 GGGACGCAACGAAGGAGAG 60.446 63.158 0.00 0.00 0.00 3.20
211 212 1.289380 GGACGCAACGAAGGAGAGT 59.711 57.895 0.00 0.00 0.00 3.24
212 213 1.009389 GGACGCAACGAAGGAGAGTG 61.009 60.000 0.00 0.00 0.00 3.51
213 214 1.618640 GACGCAACGAAGGAGAGTGC 61.619 60.000 0.00 0.00 0.00 4.40
214 215 1.664649 CGCAACGAAGGAGAGTGCA 60.665 57.895 0.00 0.00 0.00 4.57
215 216 1.862806 GCAACGAAGGAGAGTGCAC 59.137 57.895 9.40 9.40 0.00 4.57
216 217 1.891060 GCAACGAAGGAGAGTGCACG 61.891 60.000 12.01 0.00 0.00 5.34
217 218 1.006102 AACGAAGGAGAGTGCACGG 60.006 57.895 12.01 0.00 0.00 4.94
218 219 2.125912 CGAAGGAGAGTGCACGGG 60.126 66.667 12.01 0.00 0.00 5.28
219 220 2.932234 CGAAGGAGAGTGCACGGGT 61.932 63.158 12.01 0.00 0.00 5.28
220 221 1.371558 GAAGGAGAGTGCACGGGTT 59.628 57.895 12.01 1.88 0.00 4.11
221 222 0.606604 GAAGGAGAGTGCACGGGTTA 59.393 55.000 12.01 0.00 0.00 2.85
222 223 1.207329 GAAGGAGAGTGCACGGGTTAT 59.793 52.381 12.01 0.00 0.00 1.89
223 224 0.537188 AGGAGAGTGCACGGGTTATG 59.463 55.000 12.01 0.00 0.00 1.90
224 225 0.535335 GGAGAGTGCACGGGTTATGA 59.465 55.000 12.01 0.00 0.00 2.15
225 226 1.066430 GGAGAGTGCACGGGTTATGAA 60.066 52.381 12.01 0.00 0.00 2.57
226 227 2.000447 GAGAGTGCACGGGTTATGAAC 59.000 52.381 12.01 0.00 0.00 3.18
227 228 1.623811 AGAGTGCACGGGTTATGAACT 59.376 47.619 12.01 0.00 38.77 3.01
228 229 2.038557 AGAGTGCACGGGTTATGAACTT 59.961 45.455 12.01 0.00 35.98 2.66
229 230 2.151202 AGTGCACGGGTTATGAACTTG 58.849 47.619 12.01 0.00 31.32 3.16
230 231 1.877443 GTGCACGGGTTATGAACTTGT 59.123 47.619 0.00 0.00 0.00 3.16
231 232 2.095919 GTGCACGGGTTATGAACTTGTC 60.096 50.000 0.00 0.00 0.00 3.18
232 233 1.127951 GCACGGGTTATGAACTTGTCG 59.872 52.381 0.00 0.00 0.00 4.35
233 234 1.730064 CACGGGTTATGAACTTGTCGG 59.270 52.381 0.00 0.00 0.00 4.79
234 235 1.345415 ACGGGTTATGAACTTGTCGGT 59.655 47.619 0.00 0.00 0.00 4.69
235 236 1.730064 CGGGTTATGAACTTGTCGGTG 59.270 52.381 0.00 0.00 0.00 4.94
236 237 1.467342 GGGTTATGAACTTGTCGGTGC 59.533 52.381 0.00 0.00 0.00 5.01
237 238 2.423577 GGTTATGAACTTGTCGGTGCT 58.576 47.619 0.00 0.00 0.00 4.40
238 239 2.159627 GGTTATGAACTTGTCGGTGCTG 59.840 50.000 0.00 0.00 0.00 4.41
239 240 2.093306 TATGAACTTGTCGGTGCTGG 57.907 50.000 0.00 0.00 0.00 4.85
240 241 0.606401 ATGAACTTGTCGGTGCTGGG 60.606 55.000 0.00 0.00 0.00 4.45
241 242 2.594592 AACTTGTCGGTGCTGGGC 60.595 61.111 0.00 0.00 0.00 5.36
242 243 3.120086 AACTTGTCGGTGCTGGGCT 62.120 57.895 0.00 0.00 0.00 5.19
243 244 2.281761 CTTGTCGGTGCTGGGCTT 60.282 61.111 0.00 0.00 0.00 4.35
244 245 1.003839 CTTGTCGGTGCTGGGCTTA 60.004 57.895 0.00 0.00 0.00 3.09
245 246 1.003839 TTGTCGGTGCTGGGCTTAG 60.004 57.895 0.00 0.00 0.00 2.18
246 247 2.125106 GTCGGTGCTGGGCTTAGG 60.125 66.667 0.00 0.00 0.00 2.69
247 248 3.399181 TCGGTGCTGGGCTTAGGG 61.399 66.667 0.00 0.00 0.00 3.53
249 250 4.047125 GGTGCTGGGCTTAGGGCA 62.047 66.667 0.00 0.00 44.01 5.36
250 251 2.439156 GTGCTGGGCTTAGGGCAG 60.439 66.667 0.00 0.00 44.01 4.85
251 252 4.431131 TGCTGGGCTTAGGGCAGC 62.431 66.667 13.10 13.10 44.01 5.25
253 254 4.101448 CTGGGCTTAGGGCAGCGT 62.101 66.667 0.00 0.00 44.01 5.07
254 255 4.096003 TGGGCTTAGGGCAGCGTC 62.096 66.667 0.00 0.00 44.01 5.19
255 256 4.096003 GGGCTTAGGGCAGCGTCA 62.096 66.667 0.00 0.00 44.01 4.35
256 257 2.512515 GGCTTAGGGCAGCGTCAG 60.513 66.667 0.00 0.00 44.01 3.51
257 258 2.266055 GCTTAGGGCAGCGTCAGT 59.734 61.111 0.00 0.00 41.35 3.41
258 259 2.103042 GCTTAGGGCAGCGTCAGTG 61.103 63.158 0.00 0.00 41.35 3.66
259 260 2.047274 TTAGGGCAGCGTCAGTGC 60.047 61.111 0.00 0.00 40.42 4.40
264 265 2.177531 GCAGCGTCAGTGCCATTG 59.822 61.111 0.00 0.00 34.67 2.82
265 266 2.620112 GCAGCGTCAGTGCCATTGT 61.620 57.895 0.00 0.00 34.67 2.71
266 267 1.208358 CAGCGTCAGTGCCATTGTG 59.792 57.895 0.00 0.00 34.65 3.33
267 268 1.968017 AGCGTCAGTGCCATTGTGG 60.968 57.895 0.00 0.00 41.55 4.17
268 269 2.981560 GCGTCAGTGCCATTGTGGG 61.982 63.158 0.00 0.00 38.19 4.61
276 277 3.443045 CCATTGTGGGCAGCGGAC 61.443 66.667 0.00 0.00 32.67 4.79
277 278 3.443045 CATTGTGGGCAGCGGACC 61.443 66.667 0.00 0.00 45.44 4.46
327 328 3.322466 GGCGGGGATGGGATCGAT 61.322 66.667 0.00 0.00 0.00 3.59
328 329 2.266055 GCGGGGATGGGATCGATC 59.734 66.667 17.36 17.36 0.00 3.69
329 330 2.982130 CGGGGATGGGATCGATCC 59.018 66.667 32.57 32.57 46.41 3.36
337 338 2.340443 GGATCGATCCGGCCTGTC 59.660 66.667 27.93 3.50 37.19 3.51
338 339 2.498941 GGATCGATCCGGCCTGTCA 61.499 63.158 27.93 0.00 37.19 3.58
339 340 1.300233 GATCGATCCGGCCTGTCAC 60.300 63.158 14.76 0.00 0.00 3.67
340 341 2.016393 GATCGATCCGGCCTGTCACA 62.016 60.000 14.76 0.00 0.00 3.58
341 342 1.402896 ATCGATCCGGCCTGTCACAT 61.403 55.000 0.00 0.00 0.00 3.21
342 343 1.592669 CGATCCGGCCTGTCACATC 60.593 63.158 0.00 0.00 0.00 3.06
343 344 1.826024 GATCCGGCCTGTCACATCT 59.174 57.895 0.00 0.00 0.00 2.90
344 345 0.531532 GATCCGGCCTGTCACATCTG 60.532 60.000 0.00 0.00 0.00 2.90
345 346 1.267574 ATCCGGCCTGTCACATCTGT 61.268 55.000 0.00 0.00 0.00 3.41
346 347 1.742880 CCGGCCTGTCACATCTGTG 60.743 63.158 0.00 3.90 46.91 3.66
347 348 1.004560 CGGCCTGTCACATCTGTGT 60.005 57.895 9.96 0.00 45.76 3.72
357 358 1.901591 ACATCTGTGTGCTCCTTTGG 58.098 50.000 0.00 0.00 37.14 3.28
358 359 1.171308 CATCTGTGTGCTCCTTTGGG 58.829 55.000 0.00 0.00 0.00 4.12
359 360 0.773644 ATCTGTGTGCTCCTTTGGGT 59.226 50.000 0.00 0.00 0.00 4.51
360 361 0.179020 TCTGTGTGCTCCTTTGGGTG 60.179 55.000 0.00 0.00 0.00 4.61
365 366 2.747855 GCTCCTTTGGGTGCCGAG 60.748 66.667 0.00 0.00 43.88 4.63
366 367 2.750350 CTCCTTTGGGTGCCGAGT 59.250 61.111 0.00 0.00 0.00 4.18
367 368 1.073199 CTCCTTTGGGTGCCGAGTT 59.927 57.895 0.00 0.00 0.00 3.01
368 369 0.537371 CTCCTTTGGGTGCCGAGTTT 60.537 55.000 0.00 0.00 0.00 2.66
369 370 0.821711 TCCTTTGGGTGCCGAGTTTG 60.822 55.000 0.00 0.00 0.00 2.93
370 371 1.659794 CTTTGGGTGCCGAGTTTGG 59.340 57.895 0.00 0.00 0.00 3.28
371 372 1.805428 CTTTGGGTGCCGAGTTTGGG 61.805 60.000 0.00 0.00 0.00 4.12
372 373 2.285889 TTTGGGTGCCGAGTTTGGGA 62.286 55.000 0.00 0.00 0.00 4.37
373 374 2.075355 TTGGGTGCCGAGTTTGGGAT 62.075 55.000 0.00 0.00 0.00 3.85
374 375 1.749258 GGGTGCCGAGTTTGGGATC 60.749 63.158 0.00 0.00 0.00 3.36
375 376 1.749258 GGTGCCGAGTTTGGGATCC 60.749 63.158 1.92 1.92 0.00 3.36
376 377 1.299976 GTGCCGAGTTTGGGATCCT 59.700 57.895 12.58 0.00 0.00 3.24
377 378 1.026718 GTGCCGAGTTTGGGATCCTG 61.027 60.000 12.58 0.00 0.00 3.86
378 379 1.299976 GCCGAGTTTGGGATCCTGT 59.700 57.895 12.58 0.00 0.00 4.00
379 380 0.322546 GCCGAGTTTGGGATCCTGTT 60.323 55.000 12.58 0.00 0.00 3.16
380 381 1.739067 CCGAGTTTGGGATCCTGTTC 58.261 55.000 12.58 2.32 0.00 3.18
381 382 1.279271 CCGAGTTTGGGATCCTGTTCT 59.721 52.381 12.58 5.78 0.00 3.01
382 383 2.622436 CGAGTTTGGGATCCTGTTCTC 58.378 52.381 12.58 13.15 0.00 2.87
383 384 2.234908 CGAGTTTGGGATCCTGTTCTCT 59.765 50.000 12.58 3.27 0.00 3.10
384 385 3.604582 GAGTTTGGGATCCTGTTCTCTG 58.395 50.000 12.58 0.00 0.00 3.35
385 386 2.982488 AGTTTGGGATCCTGTTCTCTGT 59.018 45.455 12.58 0.00 0.00 3.41
386 387 3.395941 AGTTTGGGATCCTGTTCTCTGTT 59.604 43.478 12.58 0.00 0.00 3.16
387 388 3.423539 TTGGGATCCTGTTCTCTGTTG 57.576 47.619 12.58 0.00 0.00 3.33
388 389 1.630369 TGGGATCCTGTTCTCTGTTGG 59.370 52.381 12.58 0.00 0.00 3.77
389 390 1.630878 GGGATCCTGTTCTCTGTTGGT 59.369 52.381 12.58 0.00 0.00 3.67
390 391 2.616510 GGGATCCTGTTCTCTGTTGGTG 60.617 54.545 12.58 0.00 0.00 4.17
391 392 2.039084 GGATCCTGTTCTCTGTTGGTGT 59.961 50.000 3.84 0.00 0.00 4.16
392 393 2.620251 TCCTGTTCTCTGTTGGTGTG 57.380 50.000 0.00 0.00 0.00 3.82
393 394 1.140852 TCCTGTTCTCTGTTGGTGTGG 59.859 52.381 0.00 0.00 0.00 4.17
394 395 1.597742 CTGTTCTCTGTTGGTGTGGG 58.402 55.000 0.00 0.00 0.00 4.61
395 396 0.182537 TGTTCTCTGTTGGTGTGGGG 59.817 55.000 0.00 0.00 0.00 4.96
396 397 0.472471 GTTCTCTGTTGGTGTGGGGA 59.528 55.000 0.00 0.00 0.00 4.81
397 398 0.764890 TTCTCTGTTGGTGTGGGGAG 59.235 55.000 0.00 0.00 0.00 4.30
398 399 1.127567 TCTCTGTTGGTGTGGGGAGG 61.128 60.000 0.00 0.00 0.00 4.30
399 400 2.282462 CTGTTGGTGTGGGGAGGC 60.282 66.667 0.00 0.00 0.00 4.70
400 401 4.263572 TGTTGGTGTGGGGAGGCG 62.264 66.667 0.00 0.00 0.00 5.52
420 421 3.873812 GTGGGGGTGGCCGGATAG 61.874 72.222 5.05 0.00 0.00 2.08
421 422 4.424867 TGGGGGTGGCCGGATAGT 62.425 66.667 5.05 0.00 0.00 2.12
422 423 3.873812 GGGGGTGGCCGGATAGTG 61.874 72.222 5.05 0.00 0.00 2.74
423 424 3.873812 GGGGTGGCCGGATAGTGG 61.874 72.222 5.05 0.00 0.00 4.00
424 425 3.873812 GGGTGGCCGGATAGTGGG 61.874 72.222 5.05 0.00 0.00 4.61
425 426 2.766651 GGTGGCCGGATAGTGGGA 60.767 66.667 5.05 0.00 0.00 4.37
426 427 2.808206 GGTGGCCGGATAGTGGGAG 61.808 68.421 5.05 0.00 0.00 4.30
427 428 3.161450 TGGCCGGATAGTGGGAGC 61.161 66.667 5.05 0.00 0.00 4.70
428 429 3.161450 GGCCGGATAGTGGGAGCA 61.161 66.667 5.05 0.00 0.00 4.26
429 430 2.520536 GGCCGGATAGTGGGAGCAT 61.521 63.158 5.05 0.00 0.00 3.79
430 431 1.451936 GCCGGATAGTGGGAGCATT 59.548 57.895 5.05 0.00 0.00 3.56
431 432 0.603975 GCCGGATAGTGGGAGCATTC 60.604 60.000 5.05 0.00 0.00 2.67
432 433 0.035458 CCGGATAGTGGGAGCATTCC 59.965 60.000 0.00 0.00 43.23 3.01
433 434 0.758734 CGGATAGTGGGAGCATTCCA 59.241 55.000 0.00 0.00 46.31 3.53
438 439 4.424711 TGGGAGCATTCCACCGGC 62.425 66.667 0.00 0.00 29.79 6.13
454 455 3.551407 GCGGGGGAGAGGATGGTC 61.551 72.222 0.00 0.00 0.00 4.02
455 456 2.283809 CGGGGGAGAGGATGGTCT 59.716 66.667 0.00 0.00 0.00 3.85
456 457 1.834822 CGGGGGAGAGGATGGTCTC 60.835 68.421 0.00 0.00 42.11 3.36
474 475 2.197324 CGGAGGAGAGAGGGAGGG 59.803 72.222 0.00 0.00 0.00 4.30
475 476 2.695970 CGGAGGAGAGAGGGAGGGT 61.696 68.421 0.00 0.00 0.00 4.34
476 477 1.075600 GGAGGAGAGAGGGAGGGTG 60.076 68.421 0.00 0.00 0.00 4.61
477 478 1.075600 GAGGAGAGAGGGAGGGTGG 60.076 68.421 0.00 0.00 0.00 4.61
478 479 2.766229 GGAGAGAGGGAGGGTGGC 60.766 72.222 0.00 0.00 0.00 5.01
479 480 3.151022 GAGAGAGGGAGGGTGGCG 61.151 72.222 0.00 0.00 0.00 5.69
480 481 4.787280 AGAGAGGGAGGGTGGCGG 62.787 72.222 0.00 0.00 0.00 6.13
495 496 4.514577 CGGCGCCGGAGATCTGTT 62.515 66.667 40.50 0.00 35.56 3.16
496 497 2.125106 GGCGCCGGAGATCTGTTT 60.125 61.111 12.58 0.00 0.00 2.83
497 498 2.174319 GGCGCCGGAGATCTGTTTC 61.174 63.158 12.58 0.00 0.00 2.78
498 499 1.447838 GCGCCGGAGATCTGTTTCA 60.448 57.895 10.31 0.00 0.00 2.69
499 500 1.696832 GCGCCGGAGATCTGTTTCAC 61.697 60.000 10.31 0.00 0.00 3.18
500 501 1.413767 CGCCGGAGATCTGTTTCACG 61.414 60.000 5.05 0.00 0.00 4.35
501 502 0.108804 GCCGGAGATCTGTTTCACGA 60.109 55.000 5.05 0.00 0.00 4.35
502 503 1.914634 CCGGAGATCTGTTTCACGAG 58.085 55.000 0.00 0.00 0.00 4.18
503 504 1.472878 CCGGAGATCTGTTTCACGAGA 59.527 52.381 0.00 0.00 0.00 4.04
504 505 2.478709 CCGGAGATCTGTTTCACGAGAG 60.479 54.545 0.00 0.00 0.00 3.20
505 506 2.420372 CGGAGATCTGTTTCACGAGAGA 59.580 50.000 0.00 0.00 0.00 3.10
506 507 3.119814 CGGAGATCTGTTTCACGAGAGAA 60.120 47.826 0.00 0.00 0.00 2.87
507 508 4.170256 GGAGATCTGTTTCACGAGAGAAC 58.830 47.826 0.00 0.00 0.00 3.01
508 509 3.827625 AGATCTGTTTCACGAGAGAACG 58.172 45.455 0.00 0.00 39.31 3.95
509 510 2.417339 TCTGTTTCACGAGAGAACGG 57.583 50.000 0.00 0.05 37.61 4.44
510 511 1.000607 TCTGTTTCACGAGAGAACGGG 60.001 52.381 12.79 0.00 38.09 5.28
511 512 1.000607 CTGTTTCACGAGAGAACGGGA 60.001 52.381 0.00 0.00 44.02 5.14
514 515 3.879912 TCACGAGAGAACGGGAAAC 57.120 52.632 0.00 0.00 42.76 2.78
530 531 4.265856 GGAAACCTCCAAATTATCCCCT 57.734 45.455 0.00 0.00 41.96 4.79
531 532 3.960755 GGAAACCTCCAAATTATCCCCTG 59.039 47.826 0.00 0.00 41.96 4.45
532 533 4.572007 GGAAACCTCCAAATTATCCCCTGT 60.572 45.833 0.00 0.00 41.96 4.00
533 534 4.692523 AACCTCCAAATTATCCCCTGTT 57.307 40.909 0.00 0.00 0.00 3.16
534 535 4.692523 ACCTCCAAATTATCCCCTGTTT 57.307 40.909 0.00 0.00 0.00 2.83
535 536 5.023514 ACCTCCAAATTATCCCCTGTTTT 57.976 39.130 0.00 0.00 0.00 2.43
536 537 4.777366 ACCTCCAAATTATCCCCTGTTTTG 59.223 41.667 0.00 0.00 0.00 2.44
537 538 4.162131 CCTCCAAATTATCCCCTGTTTTGG 59.838 45.833 6.43 6.43 44.88 3.28
538 539 4.757692 TCCAAATTATCCCCTGTTTTGGT 58.242 39.130 11.30 0.00 44.22 3.67
539 540 4.530161 TCCAAATTATCCCCTGTTTTGGTG 59.470 41.667 11.30 0.00 44.22 4.17
540 541 4.323409 CCAAATTATCCCCTGTTTTGGTGG 60.323 45.833 4.89 0.00 40.77 4.61
541 542 3.845109 ATTATCCCCTGTTTTGGTGGT 57.155 42.857 0.00 0.00 0.00 4.16
542 543 3.621682 TTATCCCCTGTTTTGGTGGTT 57.378 42.857 0.00 0.00 0.00 3.67
543 544 1.715785 ATCCCCTGTTTTGGTGGTTG 58.284 50.000 0.00 0.00 0.00 3.77
544 545 0.397816 TCCCCTGTTTTGGTGGTTGG 60.398 55.000 0.00 0.00 0.00 3.77
545 546 0.689412 CCCCTGTTTTGGTGGTTGGT 60.689 55.000 0.00 0.00 0.00 3.67
546 547 1.199615 CCCTGTTTTGGTGGTTGGTT 58.800 50.000 0.00 0.00 0.00 3.67
547 548 1.138069 CCCTGTTTTGGTGGTTGGTTC 59.862 52.381 0.00 0.00 0.00 3.62
548 549 1.202359 CCTGTTTTGGTGGTTGGTTCG 60.202 52.381 0.00 0.00 0.00 3.95
549 550 0.818296 TGTTTTGGTGGTTGGTTCGG 59.182 50.000 0.00 0.00 0.00 4.30
550 551 0.528901 GTTTTGGTGGTTGGTTCGGC 60.529 55.000 0.00 0.00 0.00 5.54
551 552 0.970937 TTTTGGTGGTTGGTTCGGCA 60.971 50.000 0.00 0.00 0.00 5.69
552 553 1.668101 TTTGGTGGTTGGTTCGGCAC 61.668 55.000 0.00 0.00 0.00 5.01
553 554 2.517402 GGTGGTTGGTTCGGCACA 60.517 61.111 0.00 0.00 0.00 4.57
554 555 2.122167 GGTGGTTGGTTCGGCACAA 61.122 57.895 0.00 0.00 0.00 3.33
555 556 1.065109 GTGGTTGGTTCGGCACAAC 59.935 57.895 8.01 8.01 34.19 3.32
556 557 1.378646 TGGTTGGTTCGGCACAACA 60.379 52.632 15.27 0.00 34.19 3.33
557 558 0.753479 TGGTTGGTTCGGCACAACAT 60.753 50.000 15.27 0.00 34.19 2.71
558 559 0.318614 GGTTGGTTCGGCACAACATG 60.319 55.000 15.27 0.00 34.19 3.21
559 560 0.383949 GTTGGTTCGGCACAACATGT 59.616 50.000 0.00 0.00 34.19 3.21
560 561 0.665835 TTGGTTCGGCACAACATGTC 59.334 50.000 0.00 0.00 0.00 3.06
561 562 0.179032 TGGTTCGGCACAACATGTCT 60.179 50.000 0.00 0.00 0.00 3.41
562 563 0.517316 GGTTCGGCACAACATGTCTC 59.483 55.000 0.00 0.00 0.00 3.36
563 564 1.225855 GTTCGGCACAACATGTCTCA 58.774 50.000 0.00 0.00 0.00 3.27
564 565 1.806542 GTTCGGCACAACATGTCTCAT 59.193 47.619 0.00 0.00 0.00 2.90
565 566 2.183478 TCGGCACAACATGTCTCATT 57.817 45.000 0.00 0.00 0.00 2.57
566 567 2.076100 TCGGCACAACATGTCTCATTC 58.924 47.619 0.00 0.00 0.00 2.67
567 568 2.079158 CGGCACAACATGTCTCATTCT 58.921 47.619 0.00 0.00 0.00 2.40
568 569 2.094894 CGGCACAACATGTCTCATTCTC 59.905 50.000 0.00 0.00 0.00 2.87
569 570 2.094894 GGCACAACATGTCTCATTCTCG 59.905 50.000 0.00 0.00 0.00 4.04
570 571 2.995939 GCACAACATGTCTCATTCTCGA 59.004 45.455 0.00 0.00 0.00 4.04
571 572 3.620374 GCACAACATGTCTCATTCTCGAT 59.380 43.478 0.00 0.00 0.00 3.59
572 573 4.093998 GCACAACATGTCTCATTCTCGATT 59.906 41.667 0.00 0.00 0.00 3.34
573 574 5.391310 GCACAACATGTCTCATTCTCGATTT 60.391 40.000 0.00 0.00 0.00 2.17
574 575 6.246449 CACAACATGTCTCATTCTCGATTTC 58.754 40.000 0.00 0.00 0.00 2.17
575 576 5.934043 ACAACATGTCTCATTCTCGATTTCA 59.066 36.000 0.00 0.00 0.00 2.69
576 577 6.427853 ACAACATGTCTCATTCTCGATTTCAA 59.572 34.615 0.00 0.00 0.00 2.69
577 578 6.414408 ACATGTCTCATTCTCGATTTCAAC 57.586 37.500 0.00 0.00 0.00 3.18
578 579 5.352569 ACATGTCTCATTCTCGATTTCAACC 59.647 40.000 0.00 0.00 0.00 3.77
579 580 4.893608 TGTCTCATTCTCGATTTCAACCA 58.106 39.130 0.00 0.00 0.00 3.67
580 581 5.491070 TGTCTCATTCTCGATTTCAACCAT 58.509 37.500 0.00 0.00 0.00 3.55
581 582 6.639563 TGTCTCATTCTCGATTTCAACCATA 58.360 36.000 0.00 0.00 0.00 2.74
582 583 6.758416 TGTCTCATTCTCGATTTCAACCATAG 59.242 38.462 0.00 0.00 0.00 2.23
583 584 6.980978 GTCTCATTCTCGATTTCAACCATAGA 59.019 38.462 0.00 0.00 0.00 1.98
584 585 7.655328 GTCTCATTCTCGATTTCAACCATAGAT 59.345 37.037 0.00 0.00 0.00 1.98
585 586 8.206867 TCTCATTCTCGATTTCAACCATAGATT 58.793 33.333 0.00 0.00 0.00 2.40
586 587 8.370493 TCATTCTCGATTTCAACCATAGATTC 57.630 34.615 0.00 0.00 0.00 2.52
587 588 7.986889 TCATTCTCGATTTCAACCATAGATTCA 59.013 33.333 0.00 0.00 0.00 2.57
588 589 8.615211 CATTCTCGATTTCAACCATAGATTCAA 58.385 33.333 0.00 0.00 0.00 2.69
589 590 7.776933 TCTCGATTTCAACCATAGATTCAAG 57.223 36.000 0.00 0.00 0.00 3.02
590 591 7.555965 TCTCGATTTCAACCATAGATTCAAGA 58.444 34.615 0.00 0.00 0.00 3.02
591 592 8.206867 TCTCGATTTCAACCATAGATTCAAGAT 58.793 33.333 0.00 0.00 0.00 2.40
592 593 8.370493 TCGATTTCAACCATAGATTCAAGATC 57.630 34.615 0.00 0.00 0.00 2.75
593 594 7.169813 TCGATTTCAACCATAGATTCAAGATCG 59.830 37.037 0.00 0.00 33.53 3.69
594 595 6.925610 TTTCAACCATAGATTCAAGATCGG 57.074 37.500 0.00 0.00 0.00 4.18
595 596 5.869649 TCAACCATAGATTCAAGATCGGA 57.130 39.130 0.00 0.00 0.00 4.55
596 597 6.425210 TCAACCATAGATTCAAGATCGGAT 57.575 37.500 0.00 0.00 0.00 4.18
597 598 6.226052 TCAACCATAGATTCAAGATCGGATG 58.774 40.000 0.00 0.00 0.00 3.51
598 599 5.157940 ACCATAGATTCAAGATCGGATGG 57.842 43.478 15.49 15.49 39.85 3.51
599 600 3.937706 CCATAGATTCAAGATCGGATGGC 59.062 47.826 0.00 0.00 33.14 4.40
600 601 4.564199 CCATAGATTCAAGATCGGATGGCA 60.564 45.833 0.00 0.00 33.14 4.92
601 602 2.843701 AGATTCAAGATCGGATGGCAC 58.156 47.619 0.00 0.00 0.00 5.01
614 615 3.749981 GGCACATATGGCCCGAAG 58.250 61.111 19.18 0.00 45.87 3.79
626 627 4.641645 CCGAAGGCAGGCACACCA 62.642 66.667 0.00 0.00 46.14 4.17
627 628 2.360350 CGAAGGCAGGCACACCAT 60.360 61.111 0.00 0.00 39.06 3.55
628 629 2.401766 CGAAGGCAGGCACACCATC 61.402 63.158 0.00 0.00 39.06 3.51
629 630 1.303561 GAAGGCAGGCACACCATCA 60.304 57.895 0.00 0.00 39.06 3.07
630 631 0.682209 GAAGGCAGGCACACCATCAT 60.682 55.000 0.00 0.00 39.06 2.45
631 632 0.682209 AAGGCAGGCACACCATCATC 60.682 55.000 0.00 0.00 39.06 2.92
632 633 1.378911 GGCAGGCACACCATCATCA 60.379 57.895 0.00 0.00 39.06 3.07
633 634 1.660560 GGCAGGCACACCATCATCAC 61.661 60.000 0.00 0.00 39.06 3.06
634 635 1.660560 GCAGGCACACCATCATCACC 61.661 60.000 0.00 0.00 39.06 4.02
635 636 0.322726 CAGGCACACCATCATCACCA 60.323 55.000 0.00 0.00 39.06 4.17
636 637 0.405198 AGGCACACCATCATCACCAA 59.595 50.000 0.00 0.00 39.06 3.67
637 638 1.006281 AGGCACACCATCATCACCAAT 59.994 47.619 0.00 0.00 39.06 3.16
638 639 1.826720 GGCACACCATCATCACCAATT 59.173 47.619 0.00 0.00 35.26 2.32
639 640 2.159198 GGCACACCATCATCACCAATTC 60.159 50.000 0.00 0.00 35.26 2.17
640 641 2.492881 GCACACCATCATCACCAATTCA 59.507 45.455 0.00 0.00 0.00 2.57
641 642 3.674138 GCACACCATCATCACCAATTCAC 60.674 47.826 0.00 0.00 0.00 3.18
642 643 3.506844 CACACCATCATCACCAATTCACA 59.493 43.478 0.00 0.00 0.00 3.58
643 644 4.022155 CACACCATCATCACCAATTCACAA 60.022 41.667 0.00 0.00 0.00 3.33
644 645 4.773674 ACACCATCATCACCAATTCACAAT 59.226 37.500 0.00 0.00 0.00 2.71
645 646 5.246656 ACACCATCATCACCAATTCACAATT 59.753 36.000 0.00 0.00 0.00 2.32
646 647 6.167685 CACCATCATCACCAATTCACAATTT 58.832 36.000 0.00 0.00 0.00 1.82
647 648 6.651643 CACCATCATCACCAATTCACAATTTT 59.348 34.615 0.00 0.00 0.00 1.82
648 649 7.818446 CACCATCATCACCAATTCACAATTTTA 59.182 33.333 0.00 0.00 0.00 1.52
649 650 8.542080 ACCATCATCACCAATTCACAATTTTAT 58.458 29.630 0.00 0.00 0.00 1.40
745 750 3.149196 AGGTGTTGACAAGTTAGCCATG 58.851 45.455 0.00 0.00 0.00 3.66
755 760 4.473559 ACAAGTTAGCCATGTATACCTGGT 59.526 41.667 23.28 14.72 34.61 4.00
756 761 5.045140 ACAAGTTAGCCATGTATACCTGGTT 60.045 40.000 23.28 20.66 34.61 3.67
851 856 1.026718 GGCCAAGATGTCCGGTTGAG 61.027 60.000 0.00 0.00 0.00 3.02
852 857 0.036388 GCCAAGATGTCCGGTTGAGA 60.036 55.000 0.00 0.00 0.00 3.27
900 905 5.506317 GCTGCTTCTTGTTGCTTTTCTTCTA 60.506 40.000 0.00 0.00 0.00 2.10
903 908 6.262944 TGCTTCTTGTTGCTTTTCTTCTATGA 59.737 34.615 0.00 0.00 0.00 2.15
914 919 1.671328 TCTTCTATGACCTCGCACTCG 59.329 52.381 0.00 0.00 0.00 4.18
1230 1241 1.021202 CTGTCTACCTCGAGCTCCTG 58.979 60.000 6.99 0.53 0.00 3.86
1378 1407 2.014335 TGGAGCTGACATGTTCATCG 57.986 50.000 0.00 0.00 32.17 3.84
1397 1426 1.071605 GAACAGACTGCGCTCGAATT 58.928 50.000 9.73 0.00 0.00 2.17
1463 1501 2.869503 AAGGTTATCAGGTGGCCGCG 62.870 60.000 10.86 0.00 0.00 6.46
1526 1567 2.360852 ACCGTCGGACCTGTCGAT 60.361 61.111 20.51 0.00 38.93 3.59
1548 1589 1.376037 CCTCGGGAAGTTGCTGGAC 60.376 63.158 3.10 0.00 0.00 4.02
1626 1674 1.382522 AGATTATGCTTGCCACGTGG 58.617 50.000 30.66 30.66 38.53 4.94
1648 1707 1.424493 GCCGGTCTTCGATGCTCAAG 61.424 60.000 1.90 0.00 42.43 3.02
1761 1823 1.153647 CTACACGGATTCGCTGCCA 60.154 57.895 0.00 0.00 40.63 4.92
1813 1913 5.766150 CCAAGACATGGTTAAACACTTGA 57.234 39.130 18.91 0.00 44.85 3.02
1904 2448 0.389948 GAAGTTGAGACCGTGGCGAT 60.390 55.000 0.00 0.00 0.00 4.58
2063 2636 6.072838 GCTCTCATGTTTGATGTCTTTGAGAA 60.073 38.462 0.00 0.00 30.85 2.87
2104 2677 8.598075 GCAAAATTTAATGTGCTAATCTTGAGG 58.402 33.333 5.51 0.00 34.13 3.86
2207 2794 3.460340 TCTGGGTGGGACTGTCTTAAAAA 59.540 43.478 7.85 0.00 0.00 1.94
2209 2796 3.154710 GGGTGGGACTGTCTTAAAAAGG 58.845 50.000 7.85 0.00 0.00 3.11
2210 2797 3.436035 GGGTGGGACTGTCTTAAAAAGGT 60.436 47.826 7.85 0.00 0.00 3.50
2211 2798 4.202493 GGGTGGGACTGTCTTAAAAAGGTA 60.202 45.833 7.85 0.00 0.00 3.08
2212 2799 5.516062 GGGTGGGACTGTCTTAAAAAGGTAT 60.516 44.000 7.85 0.00 0.00 2.73
2213 2800 6.008331 GGTGGGACTGTCTTAAAAAGGTATT 58.992 40.000 7.85 0.00 0.00 1.89
2214 2801 6.492429 GGTGGGACTGTCTTAAAAAGGTATTT 59.508 38.462 7.85 0.00 0.00 1.40
2215 2802 7.014905 GGTGGGACTGTCTTAAAAAGGTATTTT 59.985 37.037 7.85 0.00 40.37 1.82
2216 2803 7.865889 GTGGGACTGTCTTAAAAAGGTATTTTG 59.134 37.037 7.85 0.00 38.62 2.44
2217 2804 7.014808 TGGGACTGTCTTAAAAAGGTATTTTGG 59.985 37.037 7.85 0.00 38.62 3.28
2218 2805 7.231925 GGGACTGTCTTAAAAAGGTATTTTGGA 59.768 37.037 7.85 0.00 38.62 3.53
2219 2806 8.080417 GGACTGTCTTAAAAAGGTATTTTGGAC 58.920 37.037 7.85 11.21 38.62 4.02
2220 2807 8.528044 ACTGTCTTAAAAAGGTATTTTGGACA 57.472 30.769 15.91 15.91 38.62 4.02
2221 2808 8.973182 ACTGTCTTAAAAAGGTATTTTGGACAA 58.027 29.630 16.73 0.00 39.62 3.18
2222 2809 9.810545 CTGTCTTAAAAAGGTATTTTGGACAAA 57.189 29.630 16.73 0.00 39.62 2.83
2223 2810 9.810545 TGTCTTAAAAAGGTATTTTGGACAAAG 57.189 29.630 15.15 5.13 38.59 2.77
2224 2811 8.761497 GTCTTAAAAAGGTATTTTGGACAAAGC 58.239 33.333 0.00 0.00 38.62 3.51
2237 2839 6.783892 TTGGACAAAGCTTGCAAATATTTC 57.216 33.333 0.00 0.00 0.00 2.17
2261 2863 5.106317 CGTATGCTCATGTTGGGTTAACTTT 60.106 40.000 5.42 0.00 40.05 2.66
2334 2958 6.647067 GTCTTGCAAGATGTACTGAACTACTT 59.353 38.462 30.65 0.00 37.39 2.24
2350 2974 7.168219 TGAACTACTTGTTGCCTCTTCATATT 58.832 34.615 0.00 0.00 39.30 1.28
2359 2983 6.889177 TGTTGCCTCTTCATATTTATGAACCA 59.111 34.615 8.57 2.95 45.03 3.67
2458 3082 7.287696 AGTTTTGTCCTTGTGTATCCATTTTCT 59.712 33.333 0.00 0.00 0.00 2.52
2466 3090 7.607991 CCTTGTGTATCCATTTTCTGACTAAGT 59.392 37.037 0.00 0.00 0.00 2.24
2480 3104 8.565896 TTCTGACTAAGTATTACCTGAACGTA 57.434 34.615 0.00 0.00 0.00 3.57
2490 3114 3.334583 ACCTGAACGTACAGCATGATT 57.665 42.857 0.00 0.00 39.69 2.57
2533 3157 7.912056 TTGATTTCATTTTTGGTTGAACACA 57.088 28.000 0.00 0.00 31.87 3.72
2536 3160 7.986320 TGATTTCATTTTTGGTTGAACACAGAT 59.014 29.630 0.00 0.00 31.87 2.90
2570 3194 4.846779 TCCAAGTGATTAGTTTTGTGGC 57.153 40.909 0.00 0.00 0.00 5.01
2594 3218 5.860941 ATAGGTGACACTAGGTTGATGAG 57.139 43.478 5.39 0.00 0.00 2.90
2600 3224 4.141937 TGACACTAGGTTGATGAGCATACC 60.142 45.833 0.00 0.00 0.00 2.73
2615 3239 4.336889 GCATACCACTGGATGCTAAGTA 57.663 45.455 18.19 0.00 44.15 2.24
2635 3259 6.783708 AGTACTAGATTTCAGTTGGAGAGG 57.216 41.667 0.00 0.00 0.00 3.69
2655 3279 6.118852 AGAGGAAGCTAAGATGAAATTGACC 58.881 40.000 0.00 0.00 0.00 4.02
2667 3291 5.560722 TGAAATTGACCTCCAGACTGTTA 57.439 39.130 0.93 0.00 0.00 2.41
2668 3292 5.551233 TGAAATTGACCTCCAGACTGTTAG 58.449 41.667 0.93 0.00 0.00 2.34
2680 3304 4.421948 CAGACTGTTAGTCCGGTAATGAC 58.578 47.826 0.00 0.00 46.18 3.06
2694 3318 4.495184 CGGTAATGACGGAATTAACAAGGC 60.495 45.833 7.80 0.00 30.44 4.35
2696 3320 1.828979 TGACGGAATTAACAAGGCCC 58.171 50.000 0.00 0.00 0.00 5.80
2729 3353 2.079925 GAACTTGTGCCATCAGAGGAC 58.920 52.381 0.00 0.00 0.00 3.85
2740 3364 0.684479 TCAGAGGACCTCATGACGGG 60.684 60.000 23.60 7.62 32.06 5.28
2822 3447 5.068198 AGCATAATAAGCTGGTGGTGAATTG 59.932 40.000 0.00 0.00 41.61 2.32
2889 3514 1.271840 TACCAGGCTTACCAGGGCAG 61.272 60.000 0.00 0.00 46.94 4.85
2925 3550 5.425539 CCTCCTTACTCTCCTCCAAAATGTA 59.574 44.000 0.00 0.00 0.00 2.29
2968 3593 3.753272 ACCATGAAGTGTGCTAATGTGAC 59.247 43.478 0.00 0.00 0.00 3.67
3010 3635 3.578688 GTTGGCAGTGCAAAATTCTAGG 58.421 45.455 18.61 0.00 0.00 3.02
3016 3641 4.640201 GCAGTGCAAAATTCTAGGGTATCA 59.360 41.667 11.09 0.00 0.00 2.15
3081 3708 5.086888 GCCTGTTGCAAAGAAAAATTCTG 57.913 39.130 0.00 0.00 39.05 3.02
3082 3709 4.571984 GCCTGTTGCAAAGAAAAATTCTGT 59.428 37.500 0.00 0.00 39.05 3.41
3083 3710 5.502869 GCCTGTTGCAAAGAAAAATTCTGTG 60.503 40.000 0.00 6.01 45.86 3.66
3084 3711 5.581874 CCTGTTGCAAAGAAAAATTCTGTGT 59.418 36.000 0.00 0.00 45.07 3.72
3085 3712 6.092533 CCTGTTGCAAAGAAAAATTCTGTGTT 59.907 34.615 0.00 0.00 45.07 3.32
3086 3713 7.361116 CCTGTTGCAAAGAAAAATTCTGTGTTT 60.361 33.333 0.00 0.00 45.07 2.83
3087 3714 7.869800 TGTTGCAAAGAAAAATTCTGTGTTTT 58.130 26.923 0.00 0.00 45.07 2.43
3088 3715 8.348507 TGTTGCAAAGAAAAATTCTGTGTTTTT 58.651 25.926 0.00 0.00 45.07 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.549902 TCATGGGGGCAGAGGAAAGA 60.550 55.000 0.00 0.00 0.00 2.52
2 3 0.039618 GTTCATGGGGGCAGAGGAAA 59.960 55.000 0.00 0.00 0.00 3.13
79 80 2.770475 GCTCCCCCTTCTCCTCCC 60.770 72.222 0.00 0.00 0.00 4.30
104 105 3.902063 CTGAATGCGACGACGGCG 61.902 66.667 21.02 21.02 44.79 6.46
105 106 3.554692 CCTGAATGCGACGACGGC 61.555 66.667 9.67 0.00 40.15 5.68
106 107 3.554692 GCCTGAATGCGACGACGG 61.555 66.667 9.67 0.00 40.15 4.79
124 125 2.202171 GTATGTGTGTGCGCGTGC 60.202 61.111 15.48 15.48 43.20 5.34
125 126 1.130411 CTGTATGTGTGTGCGCGTG 59.870 57.895 8.43 0.00 0.00 5.34
126 127 2.667318 GCTGTATGTGTGTGCGCGT 61.667 57.895 8.43 0.00 0.00 6.01
127 128 1.969809 ATGCTGTATGTGTGTGCGCG 61.970 55.000 0.00 0.00 0.00 6.86
128 129 0.521867 CATGCTGTATGTGTGTGCGC 60.522 55.000 0.00 0.00 31.92 6.09
129 130 3.591442 CATGCTGTATGTGTGTGCG 57.409 52.632 0.00 0.00 31.92 5.34
143 144 0.533531 TGGATCGATGGAGCACATGC 60.534 55.000 0.54 0.00 40.72 4.06
144 145 1.957668 TTGGATCGATGGAGCACATG 58.042 50.000 0.54 0.00 40.72 3.21
145 146 2.501261 CATTGGATCGATGGAGCACAT 58.499 47.619 0.54 0.00 44.18 3.21
146 147 1.475571 CCATTGGATCGATGGAGCACA 60.476 52.381 17.52 0.00 45.73 4.57
147 148 1.233019 CCATTGGATCGATGGAGCAC 58.767 55.000 17.52 0.00 45.73 4.40
148 149 0.535780 GCCATTGGATCGATGGAGCA 60.536 55.000 23.64 0.00 45.73 4.26
149 150 1.572085 CGCCATTGGATCGATGGAGC 61.572 60.000 23.64 12.27 45.73 4.70
150 151 1.572085 GCGCCATTGGATCGATGGAG 61.572 60.000 23.64 21.47 45.73 3.86
151 152 1.597854 GCGCCATTGGATCGATGGA 60.598 57.895 23.64 0.00 45.73 3.41
152 153 1.598962 AGCGCCATTGGATCGATGG 60.599 57.895 17.91 17.91 45.65 3.51
153 154 1.572941 CAGCGCCATTGGATCGATG 59.427 57.895 0.54 6.73 33.40 3.84
154 155 2.256591 GCAGCGCCATTGGATCGAT 61.257 57.895 6.95 0.00 0.00 3.59
155 156 2.896854 GCAGCGCCATTGGATCGA 60.897 61.111 6.95 0.00 0.00 3.59
183 184 4.776322 TTGCGTCCCCCATGCGAG 62.776 66.667 0.00 0.00 40.33 5.03
187 188 2.359354 TTCGTTGCGTCCCCCATG 60.359 61.111 0.00 0.00 0.00 3.66
188 189 2.046314 CTTCGTTGCGTCCCCCAT 60.046 61.111 0.00 0.00 0.00 4.00
189 190 4.323477 CCTTCGTTGCGTCCCCCA 62.323 66.667 0.00 0.00 0.00 4.96
190 191 3.952628 CTCCTTCGTTGCGTCCCCC 62.953 68.421 0.00 0.00 0.00 5.40
191 192 2.434359 CTCCTTCGTTGCGTCCCC 60.434 66.667 0.00 0.00 0.00 4.81
192 193 1.446272 CTCTCCTTCGTTGCGTCCC 60.446 63.158 0.00 0.00 0.00 4.46
193 194 1.009389 CACTCTCCTTCGTTGCGTCC 61.009 60.000 0.00 0.00 0.00 4.79
194 195 1.618640 GCACTCTCCTTCGTTGCGTC 61.619 60.000 0.00 0.00 0.00 5.19
195 196 1.664965 GCACTCTCCTTCGTTGCGT 60.665 57.895 0.00 0.00 0.00 5.24
196 197 1.664649 TGCACTCTCCTTCGTTGCG 60.665 57.895 0.00 0.00 0.00 4.85
197 198 1.862806 GTGCACTCTCCTTCGTTGC 59.137 57.895 10.32 0.00 0.00 4.17
198 199 1.284982 CCGTGCACTCTCCTTCGTTG 61.285 60.000 16.19 0.00 0.00 4.10
199 200 1.006102 CCGTGCACTCTCCTTCGTT 60.006 57.895 16.19 0.00 0.00 3.85
200 201 2.651361 CCGTGCACTCTCCTTCGT 59.349 61.111 16.19 0.00 0.00 3.85
201 202 2.125912 CCCGTGCACTCTCCTTCG 60.126 66.667 16.19 0.00 0.00 3.79
202 203 0.606604 TAACCCGTGCACTCTCCTTC 59.393 55.000 16.19 0.00 0.00 3.46
203 204 1.066143 CATAACCCGTGCACTCTCCTT 60.066 52.381 16.19 1.64 0.00 3.36
204 205 0.537188 CATAACCCGTGCACTCTCCT 59.463 55.000 16.19 0.00 0.00 3.69
205 206 0.535335 TCATAACCCGTGCACTCTCC 59.465 55.000 16.19 0.00 0.00 3.71
206 207 2.000447 GTTCATAACCCGTGCACTCTC 59.000 52.381 16.19 0.00 0.00 3.20
207 208 1.623811 AGTTCATAACCCGTGCACTCT 59.376 47.619 16.19 0.00 0.00 3.24
208 209 2.094762 AGTTCATAACCCGTGCACTC 57.905 50.000 16.19 0.00 0.00 3.51
209 210 2.151202 CAAGTTCATAACCCGTGCACT 58.849 47.619 16.19 0.00 0.00 4.40
210 211 1.877443 ACAAGTTCATAACCCGTGCAC 59.123 47.619 6.82 6.82 0.00 4.57
211 212 2.147958 GACAAGTTCATAACCCGTGCA 58.852 47.619 0.00 0.00 0.00 4.57
212 213 1.127951 CGACAAGTTCATAACCCGTGC 59.872 52.381 0.00 0.00 0.00 5.34
213 214 1.730064 CCGACAAGTTCATAACCCGTG 59.270 52.381 0.00 0.00 0.00 4.94
214 215 1.345415 ACCGACAAGTTCATAACCCGT 59.655 47.619 0.00 0.00 0.00 5.28
215 216 1.730064 CACCGACAAGTTCATAACCCG 59.270 52.381 0.00 0.00 0.00 5.28
216 217 1.467342 GCACCGACAAGTTCATAACCC 59.533 52.381 0.00 0.00 0.00 4.11
217 218 2.159627 CAGCACCGACAAGTTCATAACC 59.840 50.000 0.00 0.00 0.00 2.85
218 219 2.159627 CCAGCACCGACAAGTTCATAAC 59.840 50.000 0.00 0.00 0.00 1.89
219 220 2.422597 CCAGCACCGACAAGTTCATAA 58.577 47.619 0.00 0.00 0.00 1.90
220 221 1.338674 CCCAGCACCGACAAGTTCATA 60.339 52.381 0.00 0.00 0.00 2.15
221 222 0.606401 CCCAGCACCGACAAGTTCAT 60.606 55.000 0.00 0.00 0.00 2.57
222 223 1.227823 CCCAGCACCGACAAGTTCA 60.228 57.895 0.00 0.00 0.00 3.18
223 224 2.617274 GCCCAGCACCGACAAGTTC 61.617 63.158 0.00 0.00 0.00 3.01
224 225 2.594592 GCCCAGCACCGACAAGTT 60.595 61.111 0.00 0.00 0.00 2.66
225 226 1.764571 TAAGCCCAGCACCGACAAGT 61.765 55.000 0.00 0.00 0.00 3.16
226 227 1.003839 TAAGCCCAGCACCGACAAG 60.004 57.895 0.00 0.00 0.00 3.16
227 228 1.003839 CTAAGCCCAGCACCGACAA 60.004 57.895 0.00 0.00 0.00 3.18
228 229 2.662596 CTAAGCCCAGCACCGACA 59.337 61.111 0.00 0.00 0.00 4.35
229 230 2.125106 CCTAAGCCCAGCACCGAC 60.125 66.667 0.00 0.00 0.00 4.79
230 231 3.399181 CCCTAAGCCCAGCACCGA 61.399 66.667 0.00 0.00 0.00 4.69
232 233 4.047125 TGCCCTAAGCCCAGCACC 62.047 66.667 0.00 0.00 42.71 5.01
233 234 2.439156 CTGCCCTAAGCCCAGCAC 60.439 66.667 0.00 0.00 42.71 4.40
236 237 4.101448 ACGCTGCCCTAAGCCCAG 62.101 66.667 0.00 0.00 42.71 4.45
237 238 4.096003 GACGCTGCCCTAAGCCCA 62.096 66.667 0.00 0.00 42.71 5.36
238 239 4.096003 TGACGCTGCCCTAAGCCC 62.096 66.667 0.00 0.00 42.71 5.19
239 240 2.512515 CTGACGCTGCCCTAAGCC 60.513 66.667 0.00 0.00 42.71 4.35
240 241 2.103042 CACTGACGCTGCCCTAAGC 61.103 63.158 0.00 0.00 44.14 3.09
241 242 2.103042 GCACTGACGCTGCCCTAAG 61.103 63.158 0.00 0.00 0.00 2.18
242 243 2.047274 GCACTGACGCTGCCCTAA 60.047 61.111 0.00 0.00 0.00 2.69
247 248 2.177531 CAATGGCACTGACGCTGC 59.822 61.111 0.00 0.00 0.00 5.25
248 249 1.208358 CACAATGGCACTGACGCTG 59.792 57.895 1.60 0.00 0.00 5.18
249 250 1.968017 CCACAATGGCACTGACGCT 60.968 57.895 1.60 0.00 0.00 5.07
250 251 2.562912 CCACAATGGCACTGACGC 59.437 61.111 1.60 0.00 0.00 5.19
251 252 3.266964 CCCACAATGGCACTGACG 58.733 61.111 1.60 0.00 35.79 4.35
259 260 3.443045 GTCCGCTGCCCACAATGG 61.443 66.667 0.00 0.00 37.25 3.16
260 261 3.443045 GGTCCGCTGCCCACAATG 61.443 66.667 0.00 0.00 0.00 2.82
310 311 3.316573 GATCGATCCCATCCCCGCC 62.317 68.421 14.76 0.00 0.00 6.13
311 312 2.266055 GATCGATCCCATCCCCGC 59.734 66.667 14.76 0.00 0.00 6.13
312 313 2.982130 GGATCGATCCCATCCCCG 59.018 66.667 30.80 0.00 41.20 5.73
313 314 2.660064 CCGGATCGATCCCATCCCC 61.660 68.421 33.51 12.37 44.24 4.81
314 315 2.982130 CCGGATCGATCCCATCCC 59.018 66.667 33.51 13.08 44.24 3.85
315 316 2.266055 GCCGGATCGATCCCATCC 59.734 66.667 33.51 17.84 44.24 3.51
316 317 2.266055 GGCCGGATCGATCCCATC 59.734 66.667 33.51 22.84 44.24 3.51
317 318 2.203847 AGGCCGGATCGATCCCAT 60.204 61.111 33.51 18.62 44.24 4.00
318 319 3.233980 CAGGCCGGATCGATCCCA 61.234 66.667 33.51 0.00 44.24 4.37
319 320 3.227792 GACAGGCCGGATCGATCCC 62.228 68.421 33.51 22.28 44.24 3.85
320 321 2.340443 GACAGGCCGGATCGATCC 59.660 66.667 31.04 31.04 43.65 3.36
321 322 1.300233 GTGACAGGCCGGATCGATC 60.300 63.158 17.36 17.36 0.00 3.69
322 323 1.402896 ATGTGACAGGCCGGATCGAT 61.403 55.000 10.86 0.00 0.00 3.59
323 324 2.016393 GATGTGACAGGCCGGATCGA 62.016 60.000 10.86 0.00 0.00 3.59
324 325 1.592669 GATGTGACAGGCCGGATCG 60.593 63.158 10.86 0.00 0.00 3.69
325 326 0.531532 CAGATGTGACAGGCCGGATC 60.532 60.000 10.86 3.14 0.00 3.36
326 327 1.267574 ACAGATGTGACAGGCCGGAT 61.268 55.000 10.86 0.00 0.00 4.18
327 328 1.913262 ACAGATGTGACAGGCCGGA 60.913 57.895 10.86 0.00 0.00 5.14
328 329 2.665000 ACAGATGTGACAGGCCGG 59.335 61.111 0.00 0.00 0.00 6.13
338 339 1.546323 CCCAAAGGAGCACACAGATGT 60.546 52.381 0.00 0.00 35.26 3.06
339 340 1.171308 CCCAAAGGAGCACACAGATG 58.829 55.000 0.00 0.00 33.47 2.90
340 341 0.773644 ACCCAAAGGAGCACACAGAT 59.226 50.000 0.00 0.00 36.73 2.90
341 342 0.179020 CACCCAAAGGAGCACACAGA 60.179 55.000 0.00 0.00 36.73 3.41
342 343 2.334307 CACCCAAAGGAGCACACAG 58.666 57.895 0.00 0.00 36.73 3.66
343 344 4.577152 CACCCAAAGGAGCACACA 57.423 55.556 0.00 0.00 36.73 3.72
349 350 0.537371 AAACTCGGCACCCAAAGGAG 60.537 55.000 0.00 0.00 36.73 3.69
350 351 0.821711 CAAACTCGGCACCCAAAGGA 60.822 55.000 0.00 0.00 36.73 3.36
351 352 1.659794 CAAACTCGGCACCCAAAGG 59.340 57.895 0.00 0.00 40.04 3.11
352 353 1.659794 CCAAACTCGGCACCCAAAG 59.340 57.895 0.00 0.00 0.00 2.77
353 354 1.830408 CCCAAACTCGGCACCCAAA 60.830 57.895 0.00 0.00 0.00 3.28
354 355 2.075355 ATCCCAAACTCGGCACCCAA 62.075 55.000 0.00 0.00 0.00 4.12
355 356 2.478335 GATCCCAAACTCGGCACCCA 62.478 60.000 0.00 0.00 0.00 4.51
356 357 1.749258 GATCCCAAACTCGGCACCC 60.749 63.158 0.00 0.00 0.00 4.61
357 358 1.749258 GGATCCCAAACTCGGCACC 60.749 63.158 0.00 0.00 0.00 5.01
358 359 1.026718 CAGGATCCCAAACTCGGCAC 61.027 60.000 8.55 0.00 0.00 5.01
359 360 1.299648 CAGGATCCCAAACTCGGCA 59.700 57.895 8.55 0.00 0.00 5.69
360 361 0.322546 AACAGGATCCCAAACTCGGC 60.323 55.000 8.55 0.00 0.00 5.54
361 362 1.279271 AGAACAGGATCCCAAACTCGG 59.721 52.381 8.55 0.00 0.00 4.63
362 363 2.234908 AGAGAACAGGATCCCAAACTCG 59.765 50.000 8.55 0.00 0.00 4.18
363 364 3.008485 ACAGAGAACAGGATCCCAAACTC 59.992 47.826 8.55 12.56 0.00 3.01
364 365 2.982488 ACAGAGAACAGGATCCCAAACT 59.018 45.455 8.55 3.37 0.00 2.66
365 366 3.425162 ACAGAGAACAGGATCCCAAAC 57.575 47.619 8.55 0.00 0.00 2.93
366 367 3.498481 CCAACAGAGAACAGGATCCCAAA 60.498 47.826 8.55 0.00 0.00 3.28
367 368 2.040278 CCAACAGAGAACAGGATCCCAA 59.960 50.000 8.55 0.00 0.00 4.12
368 369 1.630369 CCAACAGAGAACAGGATCCCA 59.370 52.381 8.55 0.00 0.00 4.37
369 370 1.630878 ACCAACAGAGAACAGGATCCC 59.369 52.381 8.55 0.00 0.00 3.85
370 371 2.039084 ACACCAACAGAGAACAGGATCC 59.961 50.000 2.48 2.48 0.00 3.36
371 372 3.070018 CACACCAACAGAGAACAGGATC 58.930 50.000 0.00 0.00 0.00 3.36
372 373 2.224621 CCACACCAACAGAGAACAGGAT 60.225 50.000 0.00 0.00 0.00 3.24
373 374 1.140852 CCACACCAACAGAGAACAGGA 59.859 52.381 0.00 0.00 0.00 3.86
374 375 1.597742 CCACACCAACAGAGAACAGG 58.402 55.000 0.00 0.00 0.00 4.00
375 376 1.597742 CCCACACCAACAGAGAACAG 58.402 55.000 0.00 0.00 0.00 3.16
376 377 0.182537 CCCCACACCAACAGAGAACA 59.817 55.000 0.00 0.00 0.00 3.18
377 378 0.472471 TCCCCACACCAACAGAGAAC 59.528 55.000 0.00 0.00 0.00 3.01
378 379 0.764890 CTCCCCACACCAACAGAGAA 59.235 55.000 0.00 0.00 0.00 2.87
379 380 1.127567 CCTCCCCACACCAACAGAGA 61.128 60.000 0.00 0.00 0.00 3.10
380 381 1.376466 CCTCCCCACACCAACAGAG 59.624 63.158 0.00 0.00 0.00 3.35
381 382 2.829384 GCCTCCCCACACCAACAGA 61.829 63.158 0.00 0.00 0.00 3.41
382 383 2.282462 GCCTCCCCACACCAACAG 60.282 66.667 0.00 0.00 0.00 3.16
383 384 4.263572 CGCCTCCCCACACCAACA 62.264 66.667 0.00 0.00 0.00 3.33
403 404 3.873812 CTATCCGGCCACCCCCAC 61.874 72.222 2.24 0.00 0.00 4.61
404 405 4.424867 ACTATCCGGCCACCCCCA 62.425 66.667 2.24 0.00 0.00 4.96
405 406 3.873812 CACTATCCGGCCACCCCC 61.874 72.222 2.24 0.00 0.00 5.40
406 407 3.873812 CCACTATCCGGCCACCCC 61.874 72.222 2.24 0.00 0.00 4.95
407 408 3.873812 CCCACTATCCGGCCACCC 61.874 72.222 2.24 0.00 0.00 4.61
408 409 2.766651 TCCCACTATCCGGCCACC 60.767 66.667 2.24 0.00 0.00 4.61
409 410 2.822399 CTCCCACTATCCGGCCAC 59.178 66.667 2.24 0.00 0.00 5.01
410 411 3.161450 GCTCCCACTATCCGGCCA 61.161 66.667 2.24 0.00 0.00 5.36
411 412 2.056906 AATGCTCCCACTATCCGGCC 62.057 60.000 0.00 0.00 0.00 6.13
412 413 0.603975 GAATGCTCCCACTATCCGGC 60.604 60.000 0.00 0.00 0.00 6.13
413 414 0.035458 GGAATGCTCCCACTATCCGG 59.965 60.000 0.00 0.00 35.42 5.14
414 415 0.758734 TGGAATGCTCCCACTATCCG 59.241 55.000 0.00 0.00 41.64 4.18
421 422 4.424711 GCCGGTGGAATGCTCCCA 62.425 66.667 1.90 0.00 41.64 4.37
437 438 3.551407 GACCATCCTCTCCCCCGC 61.551 72.222 0.00 0.00 0.00 6.13
438 439 1.834822 GAGACCATCCTCTCCCCCG 60.835 68.421 0.00 0.00 31.88 5.73
439 440 4.304432 GAGACCATCCTCTCCCCC 57.696 66.667 0.00 0.00 31.88 5.40
455 456 2.387772 CCTCCCTCTCTCCTCCGGA 61.388 68.421 2.93 2.93 0.00 5.14
456 457 2.197324 CCTCCCTCTCTCCTCCGG 59.803 72.222 0.00 0.00 0.00 5.14
457 458 2.197324 CCCTCCCTCTCTCCTCCG 59.803 72.222 0.00 0.00 0.00 4.63
458 459 1.075600 CACCCTCCCTCTCTCCTCC 60.076 68.421 0.00 0.00 0.00 4.30
459 460 1.075600 CCACCCTCCCTCTCTCCTC 60.076 68.421 0.00 0.00 0.00 3.71
460 461 3.114390 CCACCCTCCCTCTCTCCT 58.886 66.667 0.00 0.00 0.00 3.69
461 462 2.766229 GCCACCCTCCCTCTCTCC 60.766 72.222 0.00 0.00 0.00 3.71
462 463 3.151022 CGCCACCCTCCCTCTCTC 61.151 72.222 0.00 0.00 0.00 3.20
463 464 4.787280 CCGCCACCCTCCCTCTCT 62.787 72.222 0.00 0.00 0.00 3.10
478 479 4.514577 AACAGATCTCCGGCGCCG 62.515 66.667 41.00 41.00 39.44 6.46
479 480 2.125106 AAACAGATCTCCGGCGCC 60.125 61.111 19.07 19.07 0.00 6.53
480 481 1.447838 TGAAACAGATCTCCGGCGC 60.448 57.895 0.00 0.00 0.00 6.53
481 482 1.413767 CGTGAAACAGATCTCCGGCG 61.414 60.000 0.00 0.00 35.74 6.46
482 483 0.108804 TCGTGAAACAGATCTCCGGC 60.109 55.000 0.00 0.00 35.74 6.13
483 484 1.472878 TCTCGTGAAACAGATCTCCGG 59.527 52.381 0.00 0.00 35.74 5.14
484 485 2.420372 TCTCTCGTGAAACAGATCTCCG 59.580 50.000 0.00 0.00 35.74 4.63
485 486 4.170256 GTTCTCTCGTGAAACAGATCTCC 58.830 47.826 0.00 0.00 35.74 3.71
486 487 3.849145 CGTTCTCTCGTGAAACAGATCTC 59.151 47.826 0.00 0.00 35.74 2.75
487 488 3.366476 CCGTTCTCTCGTGAAACAGATCT 60.366 47.826 0.00 0.00 35.74 2.75
488 489 2.917971 CCGTTCTCTCGTGAAACAGATC 59.082 50.000 10.74 0.00 35.74 2.75
489 490 2.352814 CCCGTTCTCTCGTGAAACAGAT 60.353 50.000 10.74 0.00 35.74 2.90
490 491 1.000607 CCCGTTCTCTCGTGAAACAGA 60.001 52.381 10.74 0.00 35.74 3.41
491 492 1.000607 TCCCGTTCTCTCGTGAAACAG 60.001 52.381 10.74 3.05 35.74 3.16
492 493 1.034356 TCCCGTTCTCTCGTGAAACA 58.966 50.000 10.74 0.00 35.74 2.83
493 494 2.144482 TTCCCGTTCTCTCGTGAAAC 57.856 50.000 0.00 0.00 0.00 2.78
494 495 2.476821 GTTTCCCGTTCTCTCGTGAAA 58.523 47.619 0.00 0.00 35.61 2.69
495 496 1.269936 GGTTTCCCGTTCTCTCGTGAA 60.270 52.381 0.00 0.00 0.00 3.18
496 497 0.316204 GGTTTCCCGTTCTCTCGTGA 59.684 55.000 0.00 0.00 0.00 4.35
497 498 0.317479 AGGTTTCCCGTTCTCTCGTG 59.683 55.000 0.00 0.00 35.12 4.35
498 499 0.602060 GAGGTTTCCCGTTCTCTCGT 59.398 55.000 0.00 0.00 35.12 4.18
499 500 0.108756 GGAGGTTTCCCGTTCTCTCG 60.109 60.000 0.00 0.00 37.53 4.04
500 501 0.974383 TGGAGGTTTCCCGTTCTCTC 59.026 55.000 0.00 0.00 43.33 3.20
501 502 1.430992 TTGGAGGTTTCCCGTTCTCT 58.569 50.000 0.00 0.00 43.33 3.10
502 503 2.265589 TTTGGAGGTTTCCCGTTCTC 57.734 50.000 0.00 0.00 43.33 2.87
503 504 2.971901 ATTTGGAGGTTTCCCGTTCT 57.028 45.000 0.00 0.00 43.33 3.01
504 505 4.097437 GGATAATTTGGAGGTTTCCCGTTC 59.903 45.833 0.00 0.00 43.33 3.95
505 506 4.021229 GGATAATTTGGAGGTTTCCCGTT 58.979 43.478 0.00 0.00 43.33 4.44
506 507 3.626475 GGGATAATTTGGAGGTTTCCCGT 60.626 47.826 0.00 0.00 43.33 5.28
507 508 2.956333 GGGATAATTTGGAGGTTTCCCG 59.044 50.000 0.00 0.00 43.33 5.14
508 509 3.052109 AGGGGATAATTTGGAGGTTTCCC 60.052 47.826 0.00 0.00 43.33 3.97
509 510 3.960755 CAGGGGATAATTTGGAGGTTTCC 59.039 47.826 0.00 0.00 44.31 3.13
510 511 4.610333 ACAGGGGATAATTTGGAGGTTTC 58.390 43.478 0.00 0.00 0.00 2.78
511 512 4.692523 ACAGGGGATAATTTGGAGGTTT 57.307 40.909 0.00 0.00 0.00 3.27
512 513 4.692523 AACAGGGGATAATTTGGAGGTT 57.307 40.909 0.00 0.00 0.00 3.50
513 514 4.692523 AAACAGGGGATAATTTGGAGGT 57.307 40.909 0.00 0.00 0.00 3.85
514 515 5.343307 CAAAACAGGGGATAATTTGGAGG 57.657 43.478 0.00 0.00 0.00 4.30
518 519 4.285775 ACCACCAAAACAGGGGATAATTTG 59.714 41.667 0.00 0.00 32.15 2.32
519 520 4.498493 ACCACCAAAACAGGGGATAATTT 58.502 39.130 0.00 0.00 32.15 1.82
520 521 4.140575 ACCACCAAAACAGGGGATAATT 57.859 40.909 0.00 0.00 32.15 1.40
521 522 3.837731 CAACCACCAAAACAGGGGATAAT 59.162 43.478 0.00 0.00 32.15 1.28
522 523 3.235200 CAACCACCAAAACAGGGGATAA 58.765 45.455 0.00 0.00 32.15 1.75
523 524 2.491825 CCAACCACCAAAACAGGGGATA 60.492 50.000 0.00 0.00 32.15 2.59
524 525 1.715785 CAACCACCAAAACAGGGGAT 58.284 50.000 0.00 0.00 32.15 3.85
525 526 0.397816 CCAACCACCAAAACAGGGGA 60.398 55.000 0.00 0.00 32.15 4.81
526 527 0.689412 ACCAACCACCAAAACAGGGG 60.689 55.000 0.00 0.00 0.00 4.79
527 528 1.138069 GAACCAACCACCAAAACAGGG 59.862 52.381 0.00 0.00 0.00 4.45
528 529 1.202359 CGAACCAACCACCAAAACAGG 60.202 52.381 0.00 0.00 0.00 4.00
529 530 1.202359 CCGAACCAACCACCAAAACAG 60.202 52.381 0.00 0.00 0.00 3.16
530 531 0.818296 CCGAACCAACCACCAAAACA 59.182 50.000 0.00 0.00 0.00 2.83
531 532 0.528901 GCCGAACCAACCACCAAAAC 60.529 55.000 0.00 0.00 0.00 2.43
532 533 0.970937 TGCCGAACCAACCACCAAAA 60.971 50.000 0.00 0.00 0.00 2.44
533 534 1.379977 TGCCGAACCAACCACCAAA 60.380 52.632 0.00 0.00 0.00 3.28
534 535 2.122167 GTGCCGAACCAACCACCAA 61.122 57.895 0.00 0.00 0.00 3.67
535 536 2.517402 GTGCCGAACCAACCACCA 60.517 61.111 0.00 0.00 0.00 4.17
536 537 2.122167 TTGTGCCGAACCAACCACC 61.122 57.895 0.00 0.00 0.00 4.61
537 538 1.065109 GTTGTGCCGAACCAACCAC 59.935 57.895 0.00 0.00 0.00 4.16
538 539 0.753479 ATGTTGTGCCGAACCAACCA 60.753 50.000 0.00 0.00 0.00 3.67
539 540 0.318614 CATGTTGTGCCGAACCAACC 60.319 55.000 0.00 0.00 0.00 3.77
540 541 0.383949 ACATGTTGTGCCGAACCAAC 59.616 50.000 0.00 0.00 0.00 3.77
541 542 0.665835 GACATGTTGTGCCGAACCAA 59.334 50.000 0.00 0.00 0.00 3.67
542 543 0.179032 AGACATGTTGTGCCGAACCA 60.179 50.000 0.00 0.00 0.00 3.67
543 544 0.517316 GAGACATGTTGTGCCGAACC 59.483 55.000 0.00 0.00 0.00 3.62
544 545 1.225855 TGAGACATGTTGTGCCGAAC 58.774 50.000 0.00 0.00 0.00 3.95
545 546 2.183478 ATGAGACATGTTGTGCCGAA 57.817 45.000 0.00 0.00 0.00 4.30
546 547 2.076100 GAATGAGACATGTTGTGCCGA 58.924 47.619 0.00 0.00 0.00 5.54
547 548 2.079158 AGAATGAGACATGTTGTGCCG 58.921 47.619 0.00 0.00 0.00 5.69
548 549 2.094894 CGAGAATGAGACATGTTGTGCC 59.905 50.000 0.00 0.00 0.00 5.01
549 550 2.995939 TCGAGAATGAGACATGTTGTGC 59.004 45.455 0.00 0.00 0.00 4.57
550 551 5.791367 AATCGAGAATGAGACATGTTGTG 57.209 39.130 0.00 0.00 0.00 3.33
551 552 5.934043 TGAAATCGAGAATGAGACATGTTGT 59.066 36.000 0.00 0.00 0.00 3.32
552 553 6.413018 TGAAATCGAGAATGAGACATGTTG 57.587 37.500 0.00 0.00 0.00 3.33
553 554 6.128172 GGTTGAAATCGAGAATGAGACATGTT 60.128 38.462 0.00 0.00 0.00 2.71
554 555 5.352569 GGTTGAAATCGAGAATGAGACATGT 59.647 40.000 0.00 0.00 0.00 3.21
555 556 5.352293 TGGTTGAAATCGAGAATGAGACATG 59.648 40.000 0.00 0.00 0.00 3.21
556 557 5.491070 TGGTTGAAATCGAGAATGAGACAT 58.509 37.500 0.00 0.00 0.00 3.06
557 558 4.893608 TGGTTGAAATCGAGAATGAGACA 58.106 39.130 0.00 0.00 0.00 3.41
558 559 6.980978 TCTATGGTTGAAATCGAGAATGAGAC 59.019 38.462 0.00 0.00 0.00 3.36
559 560 7.112452 TCTATGGTTGAAATCGAGAATGAGA 57.888 36.000 0.00 0.00 0.00 3.27
560 561 7.959689 ATCTATGGTTGAAATCGAGAATGAG 57.040 36.000 0.00 0.00 0.00 2.90
561 562 7.986889 TGAATCTATGGTTGAAATCGAGAATGA 59.013 33.333 0.00 0.00 0.00 2.57
562 563 8.146479 TGAATCTATGGTTGAAATCGAGAATG 57.854 34.615 0.00 0.00 0.00 2.67
563 564 8.737168 TTGAATCTATGGTTGAAATCGAGAAT 57.263 30.769 0.00 0.00 0.00 2.40
564 565 8.040727 TCTTGAATCTATGGTTGAAATCGAGAA 58.959 33.333 0.00 0.00 0.00 2.87
565 566 7.555965 TCTTGAATCTATGGTTGAAATCGAGA 58.444 34.615 0.00 0.00 0.00 4.04
566 567 7.776933 TCTTGAATCTATGGTTGAAATCGAG 57.223 36.000 0.00 0.00 0.00 4.04
567 568 7.169813 CGATCTTGAATCTATGGTTGAAATCGA 59.830 37.037 0.00 0.00 33.54 3.59
568 569 7.286508 CGATCTTGAATCTATGGTTGAAATCG 58.713 38.462 0.00 0.00 0.00 3.34
569 570 7.442364 TCCGATCTTGAATCTATGGTTGAAATC 59.558 37.037 0.00 0.00 0.00 2.17
570 571 7.282585 TCCGATCTTGAATCTATGGTTGAAAT 58.717 34.615 0.00 0.00 0.00 2.17
571 572 6.649155 TCCGATCTTGAATCTATGGTTGAAA 58.351 36.000 0.00 0.00 0.00 2.69
572 573 6.233905 TCCGATCTTGAATCTATGGTTGAA 57.766 37.500 0.00 0.00 0.00 2.69
573 574 5.869649 TCCGATCTTGAATCTATGGTTGA 57.130 39.130 0.00 0.00 0.00 3.18
574 575 5.410746 CCATCCGATCTTGAATCTATGGTTG 59.589 44.000 0.00 0.00 30.78 3.77
575 576 5.555017 CCATCCGATCTTGAATCTATGGTT 58.445 41.667 0.00 0.00 30.78 3.67
576 577 4.564406 GCCATCCGATCTTGAATCTATGGT 60.564 45.833 13.37 0.00 34.45 3.55
577 578 3.937706 GCCATCCGATCTTGAATCTATGG 59.062 47.826 0.00 0.00 34.78 2.74
578 579 4.391216 GTGCCATCCGATCTTGAATCTATG 59.609 45.833 0.00 0.00 0.00 2.23
579 580 4.040829 TGTGCCATCCGATCTTGAATCTAT 59.959 41.667 0.00 0.00 0.00 1.98
580 581 3.387699 TGTGCCATCCGATCTTGAATCTA 59.612 43.478 0.00 0.00 0.00 1.98
581 582 2.171237 TGTGCCATCCGATCTTGAATCT 59.829 45.455 0.00 0.00 0.00 2.40
582 583 2.564771 TGTGCCATCCGATCTTGAATC 58.435 47.619 0.00 0.00 0.00 2.52
583 584 2.715749 TGTGCCATCCGATCTTGAAT 57.284 45.000 0.00 0.00 0.00 2.57
584 585 2.715749 ATGTGCCATCCGATCTTGAA 57.284 45.000 0.00 0.00 0.00 2.69
585 586 3.557686 CCATATGTGCCATCCGATCTTGA 60.558 47.826 1.24 0.00 0.00 3.02
586 587 2.745821 CCATATGTGCCATCCGATCTTG 59.254 50.000 1.24 0.00 0.00 3.02
587 588 2.877300 GCCATATGTGCCATCCGATCTT 60.877 50.000 1.24 0.00 0.00 2.40
588 589 1.339438 GCCATATGTGCCATCCGATCT 60.339 52.381 1.24 0.00 0.00 2.75
589 590 1.089920 GCCATATGTGCCATCCGATC 58.910 55.000 1.24 0.00 0.00 3.69
590 591 3.254629 GCCATATGTGCCATCCGAT 57.745 52.632 1.24 0.00 0.00 4.18
591 592 4.798433 GCCATATGTGCCATCCGA 57.202 55.556 1.24 0.00 0.00 4.55
598 599 3.749981 CCTTCGGGCCATATGTGC 58.250 61.111 4.39 4.88 0.00 4.57
609 610 3.925630 ATGGTGTGCCTGCCTTCGG 62.926 63.158 0.00 0.00 35.27 4.30
610 611 2.360350 ATGGTGTGCCTGCCTTCG 60.360 61.111 0.00 0.00 35.27 3.79
611 612 0.682209 ATGATGGTGTGCCTGCCTTC 60.682 55.000 0.00 0.00 35.27 3.46
612 613 0.682209 GATGATGGTGTGCCTGCCTT 60.682 55.000 0.00 0.00 35.27 4.35
613 614 1.077212 GATGATGGTGTGCCTGCCT 60.077 57.895 0.00 0.00 35.27 4.75
614 615 1.378911 TGATGATGGTGTGCCTGCC 60.379 57.895 0.00 0.00 35.27 4.85
615 616 1.660560 GGTGATGATGGTGTGCCTGC 61.661 60.000 0.00 0.00 35.27 4.85
616 617 0.322726 TGGTGATGATGGTGTGCCTG 60.323 55.000 0.00 0.00 35.27 4.85
617 618 0.405198 TTGGTGATGATGGTGTGCCT 59.595 50.000 0.00 0.00 35.27 4.75
618 619 1.477553 ATTGGTGATGATGGTGTGCC 58.522 50.000 0.00 0.00 0.00 5.01
619 620 2.492881 TGAATTGGTGATGATGGTGTGC 59.507 45.455 0.00 0.00 0.00 4.57
620 621 3.506844 TGTGAATTGGTGATGATGGTGTG 59.493 43.478 0.00 0.00 0.00 3.82
621 622 3.765381 TGTGAATTGGTGATGATGGTGT 58.235 40.909 0.00 0.00 0.00 4.16
622 623 4.787260 TTGTGAATTGGTGATGATGGTG 57.213 40.909 0.00 0.00 0.00 4.17
623 624 6.363167 AAATTGTGAATTGGTGATGATGGT 57.637 33.333 0.00 0.00 0.00 3.55
624 625 8.951787 ATAAAATTGTGAATTGGTGATGATGG 57.048 30.769 0.00 0.00 0.00 3.51
727 728 5.878116 GGTATACATGGCTAACTTGTCAACA 59.122 40.000 5.01 0.00 38.33 3.33
728 729 6.037172 CAGGTATACATGGCTAACTTGTCAAC 59.963 42.308 9.67 0.00 38.33 3.18
873 878 2.503920 AAGCAACAAGAAGCAGCAAG 57.496 45.000 0.00 0.00 0.00 4.01
900 905 2.635229 GATGGCGAGTGCGAGGTCAT 62.635 60.000 0.00 0.00 44.10 3.06
903 908 4.148825 GGATGGCGAGTGCGAGGT 62.149 66.667 0.00 0.00 44.10 3.85
914 919 3.425659 GGATATTTTCAGAGGGGATGGC 58.574 50.000 0.00 0.00 0.00 4.40
1230 1241 3.644399 GACCTCGGCGTTCCTGGAC 62.644 68.421 6.85 0.01 0.00 4.02
1378 1407 1.071605 AATTCGAGCGCAGTCTGTTC 58.928 50.000 11.47 0.00 0.00 3.18
1385 1414 2.099062 GCACCAATTCGAGCGCAG 59.901 61.111 11.47 2.69 0.00 5.18
1463 1501 3.775654 CGGTCTCCTCCTGCACCC 61.776 72.222 0.00 0.00 0.00 4.61
1526 1567 0.250295 CAGCAACTTCCCGAGGTGAA 60.250 55.000 0.00 0.00 46.51 3.18
1548 1589 0.388659 CATCTGCTCCTCTCTTCCCG 59.611 60.000 0.00 0.00 0.00 5.14
1624 1672 3.066190 ATCGAAGACCGGCGACCA 61.066 61.111 9.30 0.00 42.51 4.02
1626 1674 3.255379 GCATCGAAGACCGGCGAC 61.255 66.667 9.30 1.53 42.51 5.19
1648 1707 1.040646 TCGCTCATGGGTCCATAGAC 58.959 55.000 1.72 0.00 42.73 2.59
1761 1823 4.263374 CCATCATCAAGGTCATCCATAGCT 60.263 45.833 0.00 0.00 35.89 3.32
1813 1913 4.415150 CCTGTCGGCAGCCACCAT 62.415 66.667 12.68 0.00 41.26 3.55
1887 2007 1.079819 CATCGCCACGGTCTCAACT 60.080 57.895 0.00 0.00 0.00 3.16
1904 2448 0.178767 ATCAGCTAGCGCCAATGTCA 59.821 50.000 9.55 0.00 36.60 3.58
2063 2636 0.685097 TTTGCGAGACTTGGTAGCCT 59.315 50.000 0.00 0.00 0.00 4.58
2104 2677 7.104290 ACTAAACTGACTATTTTGAGGCCTAC 58.896 38.462 4.42 0.00 0.00 3.18
2207 2794 3.640967 TGCAAGCTTTGTCCAAAATACCT 59.359 39.130 0.00 0.00 0.00 3.08
2209 2796 5.982465 TTTGCAAGCTTTGTCCAAAATAC 57.018 34.783 0.00 0.00 0.00 1.89
2210 2797 8.845413 AATATTTGCAAGCTTTGTCCAAAATA 57.155 26.923 0.00 2.38 0.00 1.40
2211 2798 7.748691 AATATTTGCAAGCTTTGTCCAAAAT 57.251 28.000 0.00 0.19 0.00 1.82
2212 2799 7.518052 CGAAATATTTGCAAGCTTTGTCCAAAA 60.518 33.333 5.17 0.00 0.00 2.44
2213 2800 6.073873 CGAAATATTTGCAAGCTTTGTCCAAA 60.074 34.615 5.17 5.09 0.00 3.28
2214 2801 5.404968 CGAAATATTTGCAAGCTTTGTCCAA 59.595 36.000 5.17 0.00 0.00 3.53
2215 2802 4.922692 CGAAATATTTGCAAGCTTTGTCCA 59.077 37.500 5.17 0.00 0.00 4.02
2216 2803 4.923281 ACGAAATATTTGCAAGCTTTGTCC 59.077 37.500 5.17 0.00 0.00 4.02
2217 2804 7.603515 CATACGAAATATTTGCAAGCTTTGTC 58.396 34.615 5.17 0.00 0.00 3.18
2218 2805 6.034898 GCATACGAAATATTTGCAAGCTTTGT 59.965 34.615 5.17 4.89 33.58 2.83
2219 2806 6.254157 AGCATACGAAATATTTGCAAGCTTTG 59.746 34.615 5.17 0.00 35.79 2.77
2220 2807 6.332630 AGCATACGAAATATTTGCAAGCTTT 58.667 32.000 5.17 0.95 35.79 3.51
2221 2808 5.894807 AGCATACGAAATATTTGCAAGCTT 58.105 33.333 5.17 0.00 35.79 3.74
2222 2809 5.066375 TGAGCATACGAAATATTTGCAAGCT 59.934 36.000 5.17 8.22 35.79 3.74
2223 2810 5.273170 TGAGCATACGAAATATTTGCAAGC 58.727 37.500 5.17 3.60 35.79 4.01
2224 2811 6.914215 ACATGAGCATACGAAATATTTGCAAG 59.086 34.615 5.17 0.00 35.79 4.01
2237 2839 3.938963 AGTTAACCCAACATGAGCATACG 59.061 43.478 0.00 0.00 39.81 3.06
2261 2863 1.278985 CACAGGTGGCTAGTCATCCAA 59.721 52.381 3.36 0.00 33.57 3.53
2458 3082 7.627088 GCTGTACGTTCAGGTAATACTTAGTCA 60.627 40.741 21.67 0.00 36.12 3.41
2466 3090 5.585820 TCATGCTGTACGTTCAGGTAATA 57.414 39.130 21.67 0.00 36.12 0.98
2506 3130 8.663911 GTGTTCAACCAAAAATGAAATCAAAGA 58.336 29.630 0.00 0.00 37.31 2.52
2553 3177 6.010219 ACCTATTGCCACAAAACTAATCACT 58.990 36.000 0.00 0.00 0.00 3.41
2570 3194 5.977635 TCATCAACCTAGTGTCACCTATTG 58.022 41.667 0.00 0.38 0.00 1.90
2600 3224 7.492524 TGAAATCTAGTACTTAGCATCCAGTG 58.507 38.462 0.00 0.00 0.00 3.66
2615 3239 5.337975 GCTTCCTCTCCAACTGAAATCTAGT 60.338 44.000 0.00 0.00 0.00 2.57
2635 3259 5.882557 TGGAGGTCAATTTCATCTTAGCTTC 59.117 40.000 0.00 0.00 0.00 3.86
2680 3304 1.170442 AACGGGCCTTGTTAATTCCG 58.830 50.000 11.49 0.00 42.69 4.30
2694 3318 5.971202 GCACAAGTTCATGATTATTAACGGG 59.029 40.000 0.00 0.00 0.00 5.28
2696 3320 6.550843 TGGCACAAGTTCATGATTATTAACG 58.449 36.000 0.00 0.00 31.92 3.18
2740 3364 1.084935 AAAACCAACAAAACCGCCGC 61.085 50.000 0.00 0.00 0.00 6.53
2822 3447 8.593492 AGAAAACTAAAATTGTGCAAGGAATC 57.407 30.769 0.00 0.00 0.00 2.52
2925 3550 9.832445 CATGGTGGAAACAATATTACTACTAGT 57.168 33.333 0.00 0.00 46.06 2.57
2968 3593 3.127548 ACCTGCATTTCTATCAAGTTGCG 59.872 43.478 0.00 0.00 32.90 4.85
3010 3635 6.336842 TCGGTACCTAGCTAATTTGATACC 57.663 41.667 10.90 0.00 0.00 2.73
3016 3641 6.267928 ACAGATGATCGGTACCTAGCTAATTT 59.732 38.462 10.90 0.00 0.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.