Multiple sequence alignment - TraesCS3B01G059400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G059400 chr3B 100.000 2814 0 0 1 2814 31064272 31061459 0.000000e+00 5197.0
1 TraesCS3B01G059400 chr3B 85.882 85 12 0 1968 2052 459449659 459449575 1.070000e-14 91.6
2 TraesCS3B01G059400 chr3D 87.067 1763 144 22 309 2052 19296799 19295102 0.000000e+00 1916.0
3 TraesCS3B01G059400 chr3D 90.614 277 22 3 3 279 19299569 19299297 5.730000e-97 364.0
4 TraesCS3B01G059400 chr3D 80.422 332 37 12 2468 2784 19292853 19292535 7.840000e-56 228.0
5 TraesCS3B01G059400 chr3A 88.050 795 71 13 309 1088 26869484 26868699 0.000000e+00 920.0
6 TraesCS3B01G059400 chr3A 88.571 315 34 1 3 317 26869823 26869511 5.690000e-102 381.0
7 TraesCS3B01G059400 chr3A 82.595 316 32 7 3 318 26832026 26832318 1.000000e-64 257.0
8 TraesCS3B01G059400 chr3A 91.346 104 3 3 1198 1295 26865546 26865443 1.360000e-28 137.0
9 TraesCS3B01G059400 chr3A 81.746 126 17 5 458 579 7083579 7083702 1.780000e-17 100.0
10 TraesCS3B01G059400 chr3A 96.296 54 0 2 1083 1135 26865709 26865657 1.390000e-13 87.9
11 TraesCS3B01G059400 chr2A 81.858 226 39 2 67 290 637228531 637228306 3.700000e-44 189.0
12 TraesCS3B01G059400 chr2A 89.610 77 6 2 2359 2435 121182914 121182988 2.310000e-16 97.1
13 TraesCS3B01G059400 chr2A 81.982 111 17 3 464 572 16254297 16254406 1.070000e-14 91.6
14 TraesCS3B01G059400 chr2A 85.882 85 12 0 1968 2052 667688697 667688613 1.070000e-14 91.6
15 TraesCS3B01G059400 chr2A 83.000 100 13 4 2354 2452 712821463 712821559 1.390000e-13 87.9
16 TraesCS3B01G059400 chr2A 83.696 92 11 4 2362 2452 712832722 712832810 1.800000e-12 84.2
17 TraesCS3B01G059400 chr2A 80.412 97 17 2 461 556 475812949 475813044 3.890000e-09 73.1
18 TraesCS3B01G059400 chr6D 79.070 258 46 7 63 314 380727598 380727343 1.340000e-38 171.0
19 TraesCS3B01G059400 chr7A 89.313 131 12 2 89 218 35486355 35486484 2.240000e-36 163.0
20 TraesCS3B01G059400 chr1A 80.349 229 31 8 1 217 374142118 374142344 8.070000e-36 161.0
21 TraesCS3B01G059400 chr7D 80.952 210 32 6 7 210 156805396 156805603 2.900000e-35 159.0
22 TraesCS3B01G059400 chr4A 88.550 131 13 2 89 218 690132511 690132640 1.040000e-34 158.0
23 TraesCS3B01G059400 chr6B 83.439 157 22 4 151 305 314559145 314559299 2.920000e-30 143.0
24 TraesCS3B01G059400 chr6B 81.373 102 14 4 1929 2029 663165177 663165080 8.360000e-11 78.7
25 TraesCS3B01G059400 chr4B 90.361 83 5 3 459 538 332723789 332723707 3.830000e-19 106.0
26 TraesCS3B01G059400 chr4B 74.247 299 51 18 1437 1716 139778239 139777948 4.960000e-18 102.0
27 TraesCS3B01G059400 chr4B 76.074 163 28 9 707 862 147383765 147383923 1.080000e-09 75.0
28 TraesCS3B01G059400 chrUn 81.538 130 19 5 460 586 31615688 31615815 4.960000e-18 102.0
29 TraesCS3B01G059400 chr7B 81.818 121 19 2 1930 2049 654601884 654602002 6.420000e-17 99.0
30 TraesCS3B01G059400 chr1D 87.640 89 6 4 581 664 492989033 492988945 6.420000e-17 99.0
31 TraesCS3B01G059400 chr1D 85.417 96 9 5 584 678 208240421 208240330 8.300000e-16 95.3
32 TraesCS3B01G059400 chr1D 84.783 92 13 1 581 671 326281914 326282005 1.070000e-14 91.6
33 TraesCS3B01G059400 chr5A 81.818 121 17 5 464 579 35740187 35740307 2.310000e-16 97.1
34 TraesCS3B01G059400 chr5A 84.536 97 11 2 576 671 698639632 698639725 2.980000e-15 93.5
35 TraesCS3B01G059400 chr5A 85.393 89 7 6 585 671 476847115 476847031 1.390000e-13 87.9
36 TraesCS3B01G059400 chr2D 86.364 88 8 2 585 671 323646385 323646469 2.980000e-15 93.5
37 TraesCS3B01G059400 chr2D 91.228 57 2 3 2741 2794 643761247 643761303 1.080000e-09 75.0
38 TraesCS3B01G059400 chr2B 84.884 86 11 2 467 551 13155715 13155799 4.990000e-13 86.1
39 TraesCS3B01G059400 chr5B 81.818 88 11 3 585 671 700551025 700551108 5.030000e-08 69.4
40 TraesCS3B01G059400 chr4D 86.667 60 4 3 2232 2289 431448464 431448407 2.340000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G059400 chr3B 31061459 31064272 2813 True 5197.000 5197 100.000000 1 2814 1 chr3B.!!$R1 2813
1 TraesCS3B01G059400 chr3D 19292535 19299569 7034 True 836.000 1916 86.034333 3 2784 3 chr3D.!!$R1 2781
2 TraesCS3B01G059400 chr3A 26865443 26869823 4380 True 381.475 920 91.065750 3 1295 4 chr3A.!!$R1 1292

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
749 3237 0.43883 GACACGAGATCAAACGGTGC 59.561 55.0 10.58 0.0 0.0 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2402 7939 0.03467 GCCCATCAGAGTTCAAGGCT 60.035 55.0 0.0 0.0 36.0 4.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 8.647143 ATTTATTTGTTCAAAGAATATGCCCG 57.353 30.769 6.25 0.00 0.00 6.13
65 66 1.949465 AAGAATATGCCCGTCCGTTC 58.051 50.000 0.00 0.00 0.00 3.95
75 76 2.036862 GCCCGTCCGTTCCTATTTCTAT 59.963 50.000 0.00 0.00 0.00 1.98
83 84 8.027189 CGTCCGTTCCTATTTCTATCATGAATA 58.973 37.037 0.00 0.00 0.00 1.75
86 87 9.360093 CCGTTCCTATTTCTATCATGAATAGTC 57.640 37.037 0.00 0.00 38.82 2.59
110 111 5.643348 CCGCATCATAAGGTAGCATATTTGA 59.357 40.000 0.00 0.00 0.00 2.69
114 115 8.352201 GCATCATAAGGTAGCATATTTGAAACA 58.648 33.333 0.00 0.00 0.00 2.83
200 201 2.896168 GCAAAGGCATGTGCATTGTAT 58.104 42.857 9.03 0.00 44.88 2.29
211 212 2.540101 GTGCATTGTATCGGCAGACTAC 59.460 50.000 0.00 0.00 38.38 2.73
294 2729 2.497273 CCTCTGGCCCAGTTTTTAATGG 59.503 50.000 11.27 0.00 36.27 3.16
355 2825 7.582435 TTCTTATCGTGAGTTTCATTCACTC 57.418 36.000 4.16 0.00 42.11 3.51
372 2842 5.506686 TCACTCGTGGAGATAGAAGAATG 57.493 43.478 0.00 0.00 33.32 2.67
396 2866 4.282195 TGGTTCAAAAAGTCACTTTGGTGT 59.718 37.500 2.78 0.00 43.41 4.16
436 2907 8.015087 GCCTTATATTTTGAAAAGTGCCAAAAC 58.985 33.333 0.00 0.00 42.67 2.43
485 2956 6.701145 ATCTTGCTAAATCTCAGTCGACTA 57.299 37.500 19.57 2.81 0.00 2.59
606 3077 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
609 3080 4.359105 TCCCTCCGTCCCATAATATAAGG 58.641 47.826 0.00 0.00 0.00 2.69
617 3088 5.106830 CGTCCCATAATATAAGGGCGTTTTC 60.107 44.000 7.18 0.00 42.52 2.29
706 3194 1.202842 AGGGGAATGGAAAACGAACGT 60.203 47.619 0.00 0.00 0.00 3.99
749 3237 0.438830 GACACGAGATCAAACGGTGC 59.561 55.000 10.58 0.00 0.00 5.01
797 3285 9.958180 TTTCTCTGAAGAAATTGTCATACCATA 57.042 29.630 0.00 0.00 44.63 2.74
811 3299 6.109359 GTCATACCATACAGAAGAAACTGCT 58.891 40.000 0.00 0.00 41.06 4.24
840 3328 1.118356 TTTCGCAAATGCCACCCCTT 61.118 50.000 0.00 0.00 37.91 3.95
842 3330 2.981302 GCAAATGCCACCCCTTCC 59.019 61.111 0.00 0.00 34.31 3.46
913 3401 6.149129 ACTTTCAAGGCCAAAACTCTTTAG 57.851 37.500 5.01 0.00 0.00 1.85
923 3411 4.997395 CCAAAACTCTTTAGCTCTGCAGTA 59.003 41.667 14.67 0.00 0.00 2.74
1000 3488 2.933573 TCACCGAAACTAGCCCAAAAA 58.066 42.857 0.00 0.00 0.00 1.94
1010 3498 0.603065 AGCCCAAAAATGGACTTCGC 59.397 50.000 0.00 0.00 0.00 4.70
1015 3503 2.799978 CCAAAAATGGACTTCGCCAAAC 59.200 45.455 0.00 0.00 42.16 2.93
1049 3537 7.072030 GCGAATCATAAGTTAAGGCATGTAAG 58.928 38.462 0.00 0.00 0.00 2.34
1062 3550 4.467438 AGGCATGTAAGAAAATTTCCCTGG 59.533 41.667 1.57 0.00 0.00 4.45
1084 6568 5.163034 TGGTTGACATCTTCCCTTTCCTAAA 60.163 40.000 0.00 0.00 0.00 1.85
1328 6865 1.745087 CCCGTCACAAAATCTGGATGG 59.255 52.381 0.00 0.00 33.98 3.51
1338 6875 1.274703 ATCTGGATGGTGGCCGTCTT 61.275 55.000 0.00 0.00 39.36 3.01
1340 6877 2.124695 GGATGGTGGCCGTCTTCC 60.125 66.667 12.23 12.23 39.36 3.46
1350 6887 1.513158 CCGTCTTCCTGCAGATCGT 59.487 57.895 17.39 0.00 0.00 3.73
1361 6898 4.457496 AGATCGTGTGGCCTGCCG 62.457 66.667 3.32 2.91 39.42 5.69
1369 6906 4.758251 TGGCCTGCCGTCATCACG 62.758 66.667 3.32 0.00 46.29 4.35
1385 6922 0.874607 CACGGCTTGTCTATACGGCC 60.875 60.000 0.00 0.00 41.09 6.13
1387 6924 0.318784 CGGCTTGTCTATACGGCCTC 60.319 60.000 0.00 0.00 41.82 4.70
1404 6941 1.152819 TCGTATCGCTACAGGGGCT 60.153 57.895 0.00 0.00 0.00 5.19
1461 6998 3.518998 GCCTCTGGCGCTCTCGTA 61.519 66.667 7.64 0.00 39.62 3.43
1489 7026 1.316706 ACTGGTCGCTGCTCTACCTC 61.317 60.000 14.18 0.00 34.23 3.85
1546 7083 2.383527 GGAAGCAGTCGCCGACAAG 61.384 63.158 20.65 12.43 39.83 3.16
1549 7086 3.482783 GCAGTCGCCGACAAGCTC 61.483 66.667 20.65 0.00 34.61 4.09
1563 7100 1.986378 CAAGCTCGTCAACGTAGGAAG 59.014 52.381 2.09 0.00 40.80 3.46
1584 7121 2.932083 GCGTCGGCGTATGCATCAG 61.932 63.158 12.58 0.00 45.35 2.90
1591 7128 1.942657 GGCGTATGCATCAGTGTCATT 59.057 47.619 0.19 0.00 45.35 2.57
1608 7145 3.918253 TTGTGATCCCCGTGCTGGC 62.918 63.158 0.00 0.00 35.87 4.85
1669 7206 1.892329 GCCTTGGTGGGTGTGATCATT 60.892 52.381 0.00 0.00 36.00 2.57
1708 7245 3.279116 GTGTGGCTTGCTCGCACA 61.279 61.111 16.72 9.72 42.99 4.57
1712 7249 2.100031 TGGCTTGCTCGCACATACG 61.100 57.895 0.00 0.00 0.00 3.06
1713 7250 2.703409 GCTTGCTCGCACATACGG 59.297 61.111 0.00 0.00 0.00 4.02
1737 7274 2.907897 GATGGCGACTTGTCGGAGGG 62.908 65.000 22.04 0.00 0.00 4.30
1739 7276 3.692406 GCGACTTGTCGGAGGGGT 61.692 66.667 22.04 0.00 0.00 4.95
1742 7279 0.679002 CGACTTGTCGGAGGGGTCTA 60.679 60.000 14.53 0.00 0.00 2.59
1749 7286 1.153005 CGGAGGGGTCTACTACGCT 60.153 63.158 0.00 0.00 40.76 5.07
1785 7322 0.251354 CTAGAAGAAGGGCTGCAGCA 59.749 55.000 37.63 14.82 44.36 4.41
1787 7324 0.394080 AGAAGAAGGGCTGCAGCATC 60.394 55.000 37.63 29.54 44.36 3.91
1793 7330 2.413142 GGGCTGCAGCATCCTGTTC 61.413 63.158 37.63 18.74 44.36 3.18
1808 7345 1.375523 GTTCCACCACGCCTACCTG 60.376 63.158 0.00 0.00 0.00 4.00
1810 7347 0.542467 TTCCACCACGCCTACCTGTA 60.542 55.000 0.00 0.00 0.00 2.74
1820 7357 5.417894 CCACGCCTACCTGTATAGATATTCA 59.582 44.000 0.00 0.00 0.00 2.57
1821 7358 6.323266 CACGCCTACCTGTATAGATATTCAC 58.677 44.000 0.00 0.00 0.00 3.18
1826 7363 8.754080 GCCTACCTGTATAGATATTCACTCATT 58.246 37.037 0.00 0.00 0.00 2.57
1830 7367 8.307483 ACCTGTATAGATATTCACTCATTTCGG 58.693 37.037 0.00 0.00 0.00 4.30
1831 7368 7.276658 CCTGTATAGATATTCACTCATTTCGGC 59.723 40.741 0.00 0.00 0.00 5.54
1832 7369 7.097192 TGTATAGATATTCACTCATTTCGGCC 58.903 38.462 0.00 0.00 0.00 6.13
1833 7370 3.393800 AGATATTCACTCATTTCGGCCG 58.606 45.455 22.12 22.12 0.00 6.13
1834 7371 2.684001 TATTCACTCATTTCGGCCGT 57.316 45.000 27.15 1.97 0.00 5.68
1835 7372 2.684001 ATTCACTCATTTCGGCCGTA 57.316 45.000 27.15 14.12 0.00 4.02
1836 7373 2.684001 TTCACTCATTTCGGCCGTAT 57.316 45.000 27.15 17.02 0.00 3.06
1837 7374 3.804786 TTCACTCATTTCGGCCGTATA 57.195 42.857 27.15 12.12 0.00 1.47
1838 7375 4.330944 TTCACTCATTTCGGCCGTATAT 57.669 40.909 27.15 13.98 0.00 0.86
1839 7376 4.330944 TCACTCATTTCGGCCGTATATT 57.669 40.909 27.15 3.92 0.00 1.28
1840 7377 4.699637 TCACTCATTTCGGCCGTATATTT 58.300 39.130 27.15 2.26 0.00 1.40
1841 7378 4.748102 TCACTCATTTCGGCCGTATATTTC 59.252 41.667 27.15 0.00 0.00 2.17
1842 7379 4.750098 CACTCATTTCGGCCGTATATTTCT 59.250 41.667 27.15 0.00 0.00 2.52
1843 7380 4.989168 ACTCATTTCGGCCGTATATTTCTC 59.011 41.667 27.15 0.00 0.00 2.87
1844 7381 4.312443 TCATTTCGGCCGTATATTTCTCC 58.688 43.478 27.15 0.00 0.00 3.71
1845 7382 4.039973 TCATTTCGGCCGTATATTTCTCCT 59.960 41.667 27.15 0.00 0.00 3.69
1846 7383 3.655276 TTCGGCCGTATATTTCTCCTC 57.345 47.619 27.15 0.00 0.00 3.71
1847 7384 2.872732 TCGGCCGTATATTTCTCCTCT 58.127 47.619 27.15 0.00 0.00 3.69
1848 7385 3.228453 TCGGCCGTATATTTCTCCTCTT 58.772 45.455 27.15 0.00 0.00 2.85
1849 7386 3.640029 TCGGCCGTATATTTCTCCTCTTT 59.360 43.478 27.15 0.00 0.00 2.52
1850 7387 3.988517 CGGCCGTATATTTCTCCTCTTTC 59.011 47.826 19.50 0.00 0.00 2.62
1851 7388 4.262079 CGGCCGTATATTTCTCCTCTTTCT 60.262 45.833 19.50 0.00 0.00 2.52
1852 7389 5.231702 GGCCGTATATTTCTCCTCTTTCTC 58.768 45.833 0.00 0.00 0.00 2.87
1853 7390 5.011227 GGCCGTATATTTCTCCTCTTTCTCT 59.989 44.000 0.00 0.00 0.00 3.10
1870 7407 8.103948 TCTTTCTCTTTTGATTTGATCAGACC 57.896 34.615 0.00 0.00 40.94 3.85
1927 7464 7.449086 AGGAAATTAAGTGTTTATTTGTCGGGA 59.551 33.333 0.00 0.00 0.00 5.14
1936 7473 5.821470 TGTTTATTTGTCGGGAAACACAGTA 59.179 36.000 0.00 0.00 0.00 2.74
1939 7476 2.519377 TGTCGGGAAACACAGTACAG 57.481 50.000 0.00 0.00 0.00 2.74
1945 7482 3.550639 CGGGAAACACAGTACAGACGTAA 60.551 47.826 0.00 0.00 0.00 3.18
1948 7485 4.805192 GGAAACACAGTACAGACGTAAACA 59.195 41.667 0.00 0.00 0.00 2.83
1959 7496 8.180267 AGTACAGACGTAAACACTCATACATAC 58.820 37.037 0.00 0.00 0.00 2.39
1960 7497 6.916440 ACAGACGTAAACACTCATACATACA 58.084 36.000 0.00 0.00 0.00 2.29
1961 7498 7.372714 ACAGACGTAAACACTCATACATACAA 58.627 34.615 0.00 0.00 0.00 2.41
1962 7499 7.868922 ACAGACGTAAACACTCATACATACAAA 59.131 33.333 0.00 0.00 0.00 2.83
1963 7500 8.869897 CAGACGTAAACACTCATACATACAAAT 58.130 33.333 0.00 0.00 0.00 2.32
2003 7540 3.952675 GCACACACGCACACCCTG 61.953 66.667 0.00 0.00 0.00 4.45
2011 7548 2.124151 GCACACCCTGCCCCTATG 60.124 66.667 0.00 0.00 40.42 2.23
2012 7549 2.679342 GCACACCCTGCCCCTATGA 61.679 63.158 0.00 0.00 40.42 2.15
2013 7550 1.998530 CACACCCTGCCCCTATGAA 59.001 57.895 0.00 0.00 0.00 2.57
2014 7551 0.394352 CACACCCTGCCCCTATGAAC 60.394 60.000 0.00 0.00 0.00 3.18
2021 7558 1.281867 CTGCCCCTATGAACACTTCCA 59.718 52.381 0.00 0.00 0.00 3.53
2031 7568 4.327982 TGAACACTTCCAAGAGACTGAG 57.672 45.455 0.00 0.00 0.00 3.35
2032 7569 3.070159 TGAACACTTCCAAGAGACTGAGG 59.930 47.826 0.00 0.00 0.00 3.86
2033 7570 1.974236 ACACTTCCAAGAGACTGAGGG 59.026 52.381 0.00 0.00 0.00 4.30
2035 7572 1.150135 ACTTCCAAGAGACTGAGGGGA 59.850 52.381 0.00 0.00 0.00 4.81
2042 7579 1.077828 AGAGACTGAGGGGACACATCA 59.922 52.381 0.00 0.00 37.59 3.07
2045 7582 3.900601 GAGACTGAGGGGACACATCATAT 59.099 47.826 0.00 0.00 39.45 1.78
2049 7586 4.102210 ACTGAGGGGACACATCATATTGAG 59.898 45.833 0.00 0.00 39.45 3.02
2052 7589 5.012458 TGAGGGGACACATCATATTGAGATC 59.988 44.000 0.00 0.00 34.49 2.75
2053 7590 4.909695 AGGGGACACATCATATTGAGATCA 59.090 41.667 0.00 0.00 0.00 2.92
2054 7591 5.370584 AGGGGACACATCATATTGAGATCAA 59.629 40.000 0.00 0.00 40.51 2.57
2055 7592 6.064060 GGGGACACATCATATTGAGATCAAA 58.936 40.000 0.00 0.00 39.55 2.69
2056 7593 6.547141 GGGGACACATCATATTGAGATCAAAA 59.453 38.462 0.00 0.00 39.55 2.44
2057 7594 7.068593 GGGGACACATCATATTGAGATCAAAAA 59.931 37.037 0.00 0.00 39.55 1.94
2058 7595 8.636213 GGGACACATCATATTGAGATCAAAAAT 58.364 33.333 0.00 0.00 39.55 1.82
2059 7596 9.459640 GGACACATCATATTGAGATCAAAAATG 57.540 33.333 11.96 11.96 39.55 2.32
2060 7597 8.867112 ACACATCATATTGAGATCAAAAATGC 57.133 30.769 12.82 0.00 39.55 3.56
2061 7598 8.692710 ACACATCATATTGAGATCAAAAATGCT 58.307 29.630 12.82 4.93 39.55 3.79
2069 7606 7.928908 TTGAGATCAAAAATGCTAAACACAC 57.071 32.000 0.00 0.00 32.11 3.82
2070 7607 7.036996 TGAGATCAAAAATGCTAAACACACA 57.963 32.000 0.00 0.00 0.00 3.72
2071 7608 7.140705 TGAGATCAAAAATGCTAAACACACAG 58.859 34.615 0.00 0.00 0.00 3.66
2072 7609 6.449698 AGATCAAAAATGCTAAACACACAGG 58.550 36.000 0.00 0.00 0.00 4.00
2073 7610 4.367450 TCAAAAATGCTAAACACACAGGC 58.633 39.130 0.00 0.00 0.00 4.85
2074 7611 3.385193 AAAATGCTAAACACACAGGCC 57.615 42.857 0.00 0.00 0.00 5.19
2075 7612 1.256812 AATGCTAAACACACAGGCCC 58.743 50.000 0.00 0.00 0.00 5.80
2076 7613 0.611896 ATGCTAAACACACAGGCCCC 60.612 55.000 0.00 0.00 0.00 5.80
2077 7614 1.228429 GCTAAACACACAGGCCCCA 60.228 57.895 0.00 0.00 0.00 4.96
2078 7615 0.611896 GCTAAACACACAGGCCCCAT 60.612 55.000 0.00 0.00 0.00 4.00
2079 7616 1.923356 CTAAACACACAGGCCCCATT 58.077 50.000 0.00 0.00 0.00 3.16
2080 7617 2.882229 GCTAAACACACAGGCCCCATTA 60.882 50.000 0.00 0.00 0.00 1.90
2081 7618 1.627864 AAACACACAGGCCCCATTAC 58.372 50.000 0.00 0.00 0.00 1.89
2082 7619 0.608035 AACACACAGGCCCCATTACG 60.608 55.000 0.00 0.00 0.00 3.18
2083 7620 1.748879 CACACAGGCCCCATTACGG 60.749 63.158 0.00 0.00 0.00 4.02
2096 7633 4.145365 CCATTACGGGACTTTCCATACA 57.855 45.455 0.00 0.00 38.64 2.29
2097 7634 4.519213 CCATTACGGGACTTTCCATACAA 58.481 43.478 0.00 0.00 38.64 2.41
2098 7635 5.130350 CCATTACGGGACTTTCCATACAAT 58.870 41.667 0.00 0.00 38.64 2.71
2099 7636 5.592688 CCATTACGGGACTTTCCATACAATT 59.407 40.000 0.00 0.00 38.64 2.32
2100 7637 6.238648 CCATTACGGGACTTTCCATACAATTC 60.239 42.308 0.00 0.00 38.64 2.17
2101 7638 4.569719 ACGGGACTTTCCATACAATTCT 57.430 40.909 0.00 0.00 38.64 2.40
2102 7639 4.514401 ACGGGACTTTCCATACAATTCTC 58.486 43.478 0.00 0.00 38.64 2.87
2103 7640 4.225267 ACGGGACTTTCCATACAATTCTCT 59.775 41.667 0.00 0.00 38.64 3.10
2104 7641 4.811557 CGGGACTTTCCATACAATTCTCTC 59.188 45.833 0.00 0.00 38.64 3.20
2105 7642 5.126779 GGGACTTTCCATACAATTCTCTCC 58.873 45.833 0.00 0.00 38.64 3.71
2106 7643 4.811557 GGACTTTCCATACAATTCTCTCCG 59.188 45.833 0.00 0.00 36.28 4.63
2107 7644 4.192317 ACTTTCCATACAATTCTCTCCGC 58.808 43.478 0.00 0.00 0.00 5.54
2108 7645 2.910688 TCCATACAATTCTCTCCGCC 57.089 50.000 0.00 0.00 0.00 6.13
2109 7646 1.416401 TCCATACAATTCTCTCCGCCC 59.584 52.381 0.00 0.00 0.00 6.13
2110 7647 1.417890 CCATACAATTCTCTCCGCCCT 59.582 52.381 0.00 0.00 0.00 5.19
2111 7648 2.548920 CCATACAATTCTCTCCGCCCTC 60.549 54.545 0.00 0.00 0.00 4.30
2112 7649 1.120530 TACAATTCTCTCCGCCCTCC 58.879 55.000 0.00 0.00 0.00 4.30
2113 7650 0.618968 ACAATTCTCTCCGCCCTCCT 60.619 55.000 0.00 0.00 0.00 3.69
2114 7651 0.543749 CAATTCTCTCCGCCCTCCTT 59.456 55.000 0.00 0.00 0.00 3.36
2115 7652 1.762957 CAATTCTCTCCGCCCTCCTTA 59.237 52.381 0.00 0.00 0.00 2.69
2116 7653 2.370189 CAATTCTCTCCGCCCTCCTTAT 59.630 50.000 0.00 0.00 0.00 1.73
2117 7654 2.176247 TTCTCTCCGCCCTCCTTATT 57.824 50.000 0.00 0.00 0.00 1.40
2118 7655 2.176247 TCTCTCCGCCCTCCTTATTT 57.824 50.000 0.00 0.00 0.00 1.40
2119 7656 2.478292 TCTCTCCGCCCTCCTTATTTT 58.522 47.619 0.00 0.00 0.00 1.82
2120 7657 2.434702 TCTCTCCGCCCTCCTTATTTTC 59.565 50.000 0.00 0.00 0.00 2.29
2121 7658 2.170607 CTCTCCGCCCTCCTTATTTTCA 59.829 50.000 0.00 0.00 0.00 2.69
2122 7659 2.093128 TCTCCGCCCTCCTTATTTTCAC 60.093 50.000 0.00 0.00 0.00 3.18
2123 7660 1.064979 TCCGCCCTCCTTATTTTCACC 60.065 52.381 0.00 0.00 0.00 4.02
2124 7661 1.014352 CGCCCTCCTTATTTTCACCG 58.986 55.000 0.00 0.00 0.00 4.94
2125 7662 1.389555 GCCCTCCTTATTTTCACCGG 58.610 55.000 0.00 0.00 0.00 5.28
2126 7663 2.022238 GCCCTCCTTATTTTCACCGGG 61.022 57.143 6.32 0.00 0.00 5.73
2127 7664 1.409661 CCCTCCTTATTTTCACCGGGG 60.410 57.143 6.32 0.00 0.00 5.73
2128 7665 1.389555 CTCCTTATTTTCACCGGGGC 58.610 55.000 6.32 0.00 0.00 5.80
2129 7666 0.393267 TCCTTATTTTCACCGGGGCG 60.393 55.000 6.32 0.00 0.00 6.13
2143 7680 3.471806 GGCGGGACTCCCTTCCTC 61.472 72.222 12.62 0.00 42.67 3.71
2144 7681 3.471806 GCGGGACTCCCTTCCTCC 61.472 72.222 12.62 0.00 42.67 4.30
2145 7682 2.764547 CGGGACTCCCTTCCTCCC 60.765 72.222 12.62 0.00 42.67 4.30
2146 7683 2.367107 GGGACTCCCTTCCTCCCC 60.367 72.222 6.90 0.00 41.34 4.81
2147 7684 2.367107 GGACTCCCTTCCTCCCCC 60.367 72.222 0.00 0.00 32.24 5.40
2148 7685 2.788589 GACTCCCTTCCTCCCCCT 59.211 66.667 0.00 0.00 0.00 4.79
2149 7686 1.083141 GACTCCCTTCCTCCCCCTT 59.917 63.158 0.00 0.00 0.00 3.95
2150 7687 0.342313 GACTCCCTTCCTCCCCCTTA 59.658 60.000 0.00 0.00 0.00 2.69
2151 7688 0.804255 ACTCCCTTCCTCCCCCTTAA 59.196 55.000 0.00 0.00 0.00 1.85
2152 7689 1.373577 ACTCCCTTCCTCCCCCTTAAT 59.626 52.381 0.00 0.00 0.00 1.40
2153 7690 2.058705 CTCCCTTCCTCCCCCTTAATC 58.941 57.143 0.00 0.00 0.00 1.75
2154 7691 1.149986 CCCTTCCTCCCCCTTAATCC 58.850 60.000 0.00 0.00 0.00 3.01
2155 7692 1.630894 CCCTTCCTCCCCCTTAATCCA 60.631 57.143 0.00 0.00 0.00 3.41
2156 7693 2.214201 CCTTCCTCCCCCTTAATCCAA 58.786 52.381 0.00 0.00 0.00 3.53
2157 7694 2.791774 CCTTCCTCCCCCTTAATCCAAT 59.208 50.000 0.00 0.00 0.00 3.16
2158 7695 3.987501 CCTTCCTCCCCCTTAATCCAATA 59.012 47.826 0.00 0.00 0.00 1.90
2159 7696 4.418863 CCTTCCTCCCCCTTAATCCAATAA 59.581 45.833 0.00 0.00 0.00 1.40
2160 7697 5.103258 CCTTCCTCCCCCTTAATCCAATAAA 60.103 44.000 0.00 0.00 0.00 1.40
2161 7698 6.413207 CCTTCCTCCCCCTTAATCCAATAAAT 60.413 42.308 0.00 0.00 0.00 1.40
2162 7699 7.202374 CCTTCCTCCCCCTTAATCCAATAAATA 60.202 40.741 0.00 0.00 0.00 1.40
2163 7700 7.730994 TCCTCCCCCTTAATCCAATAAATAA 57.269 36.000 0.00 0.00 0.00 1.40
2164 7701 7.532199 TCCTCCCCCTTAATCCAATAAATAAC 58.468 38.462 0.00 0.00 0.00 1.89
2165 7702 7.355212 TCCTCCCCCTTAATCCAATAAATAACT 59.645 37.037 0.00 0.00 0.00 2.24
2166 7703 7.451566 CCTCCCCCTTAATCCAATAAATAACTG 59.548 40.741 0.00 0.00 0.00 3.16
2167 7704 7.889178 TCCCCCTTAATCCAATAAATAACTGT 58.111 34.615 0.00 0.00 0.00 3.55
2168 7705 8.002459 TCCCCCTTAATCCAATAAATAACTGTC 58.998 37.037 0.00 0.00 0.00 3.51
2169 7706 7.782644 CCCCCTTAATCCAATAAATAACTGTCA 59.217 37.037 0.00 0.00 0.00 3.58
2170 7707 9.367160 CCCCTTAATCCAATAAATAACTGTCAT 57.633 33.333 0.00 0.00 0.00 3.06
2177 7714 9.685276 ATCCAATAAATAACTGTCATGTCAAGA 57.315 29.630 0.00 0.00 0.00 3.02
2178 7715 9.685276 TCCAATAAATAACTGTCATGTCAAGAT 57.315 29.630 0.00 0.00 0.00 2.40
2183 7720 7.559590 AATAACTGTCATGTCAAGATTAGCC 57.440 36.000 0.00 0.00 0.00 3.93
2184 7721 4.833478 ACTGTCATGTCAAGATTAGCCT 57.167 40.909 0.00 0.00 0.00 4.58
2185 7722 4.511527 ACTGTCATGTCAAGATTAGCCTG 58.488 43.478 0.00 0.00 0.00 4.85
2186 7723 4.019860 ACTGTCATGTCAAGATTAGCCTGT 60.020 41.667 0.00 0.00 0.00 4.00
2187 7724 5.187772 ACTGTCATGTCAAGATTAGCCTGTA 59.812 40.000 0.00 0.00 0.00 2.74
2188 7725 6.048732 TGTCATGTCAAGATTAGCCTGTAA 57.951 37.500 0.00 0.00 0.00 2.41
2189 7726 6.653020 TGTCATGTCAAGATTAGCCTGTAAT 58.347 36.000 0.00 0.00 0.00 1.89
2190 7727 6.539826 TGTCATGTCAAGATTAGCCTGTAATG 59.460 38.462 0.00 0.00 0.00 1.90
2191 7728 6.017605 GTCATGTCAAGATTAGCCTGTAATGG 60.018 42.308 0.00 0.00 0.00 3.16
2192 7729 5.435686 TGTCAAGATTAGCCTGTAATGGT 57.564 39.130 0.00 0.00 0.00 3.55
2193 7730 5.428253 TGTCAAGATTAGCCTGTAATGGTC 58.572 41.667 0.00 0.00 0.00 4.02
2194 7731 4.816925 GTCAAGATTAGCCTGTAATGGTCC 59.183 45.833 0.00 0.00 0.00 4.46
2195 7732 4.721776 TCAAGATTAGCCTGTAATGGTCCT 59.278 41.667 0.00 0.00 0.00 3.85
2196 7733 4.696479 AGATTAGCCTGTAATGGTCCTG 57.304 45.455 0.00 0.00 0.00 3.86
2197 7734 4.040755 AGATTAGCCTGTAATGGTCCTGT 58.959 43.478 0.00 0.00 0.00 4.00
2198 7735 5.216622 AGATTAGCCTGTAATGGTCCTGTA 58.783 41.667 0.00 0.00 0.00 2.74
2199 7736 5.665812 AGATTAGCCTGTAATGGTCCTGTAA 59.334 40.000 0.00 0.00 0.00 2.41
2200 7737 5.968676 TTAGCCTGTAATGGTCCTGTAAT 57.031 39.130 0.00 0.00 0.00 1.89
2201 7738 4.423625 AGCCTGTAATGGTCCTGTAATC 57.576 45.455 0.00 0.00 0.00 1.75
2202 7739 3.136626 AGCCTGTAATGGTCCTGTAATCC 59.863 47.826 0.00 0.00 0.00 3.01
2203 7740 3.136626 GCCTGTAATGGTCCTGTAATCCT 59.863 47.826 0.00 0.00 0.00 3.24
2204 7741 4.385310 GCCTGTAATGGTCCTGTAATCCTT 60.385 45.833 0.00 0.00 0.00 3.36
2205 7742 5.368989 CCTGTAATGGTCCTGTAATCCTTC 58.631 45.833 0.00 0.00 0.00 3.46
2206 7743 5.018539 TGTAATGGTCCTGTAATCCTTCG 57.981 43.478 0.00 0.00 0.00 3.79
2207 7744 4.468510 TGTAATGGTCCTGTAATCCTTCGT 59.531 41.667 0.00 0.00 0.00 3.85
2208 7745 4.569719 AATGGTCCTGTAATCCTTCGTT 57.430 40.909 0.00 0.00 0.00 3.85
2209 7746 3.328382 TGGTCCTGTAATCCTTCGTTG 57.672 47.619 0.00 0.00 0.00 4.10
2210 7747 2.901192 TGGTCCTGTAATCCTTCGTTGA 59.099 45.455 0.00 0.00 0.00 3.18
2211 7748 3.517901 TGGTCCTGTAATCCTTCGTTGAT 59.482 43.478 0.00 0.00 0.00 2.57
2212 7749 3.871594 GGTCCTGTAATCCTTCGTTGATG 59.128 47.826 0.00 0.00 0.00 3.07
2213 7750 4.504858 GTCCTGTAATCCTTCGTTGATGT 58.495 43.478 0.00 0.00 0.00 3.06
2214 7751 5.394883 GGTCCTGTAATCCTTCGTTGATGTA 60.395 44.000 0.00 0.00 0.00 2.29
2215 7752 5.749109 GTCCTGTAATCCTTCGTTGATGTAG 59.251 44.000 0.00 0.00 0.00 2.74
2216 7753 4.508124 CCTGTAATCCTTCGTTGATGTAGC 59.492 45.833 0.00 0.00 0.00 3.58
2217 7754 5.079689 TGTAATCCTTCGTTGATGTAGCA 57.920 39.130 0.00 0.00 0.00 3.49
2218 7755 5.670485 TGTAATCCTTCGTTGATGTAGCAT 58.330 37.500 0.00 0.00 0.00 3.79
2219 7756 6.112734 TGTAATCCTTCGTTGATGTAGCATT 58.887 36.000 0.00 0.00 0.00 3.56
2220 7757 5.490139 AATCCTTCGTTGATGTAGCATTG 57.510 39.130 0.00 0.00 0.00 2.82
2221 7758 2.677836 TCCTTCGTTGATGTAGCATTGC 59.322 45.455 0.00 0.00 0.00 3.56
2222 7759 2.223340 CCTTCGTTGATGTAGCATTGCC 60.223 50.000 4.70 0.00 0.00 4.52
2223 7760 1.006086 TCGTTGATGTAGCATTGCCG 58.994 50.000 4.70 0.00 0.00 5.69
2224 7761 0.726827 CGTTGATGTAGCATTGCCGT 59.273 50.000 4.70 0.00 0.00 5.68
2225 7762 1.930503 CGTTGATGTAGCATTGCCGTA 59.069 47.619 4.70 0.00 0.00 4.02
2226 7763 2.543848 CGTTGATGTAGCATTGCCGTAT 59.456 45.455 4.70 0.00 0.00 3.06
2227 7764 3.604543 CGTTGATGTAGCATTGCCGTATG 60.605 47.826 4.70 0.00 0.00 2.39
2228 7765 2.493035 TGATGTAGCATTGCCGTATGG 58.507 47.619 4.70 0.00 38.77 2.74
2229 7766 2.103941 TGATGTAGCATTGCCGTATGGA 59.896 45.455 4.73 0.00 37.49 3.41
2230 7767 2.238942 TGTAGCATTGCCGTATGGAG 57.761 50.000 4.73 0.00 37.49 3.86
2231 7768 1.760029 TGTAGCATTGCCGTATGGAGA 59.240 47.619 4.73 0.00 37.49 3.71
2232 7769 2.368548 TGTAGCATTGCCGTATGGAGAT 59.631 45.455 4.73 0.00 37.49 2.75
2258 7795 3.504863 GAAGTCGCCACATACGTCTTTA 58.495 45.455 0.00 0.00 38.63 1.85
2273 7810 3.973135 CGTCTTTATAGTCGATGGGAACG 59.027 47.826 0.00 0.00 35.38 3.95
2274 7811 4.497006 CGTCTTTATAGTCGATGGGAACGT 60.497 45.833 0.00 0.00 35.38 3.99
2278 7815 1.012086 TAGTCGATGGGAACGTCTCG 58.988 55.000 0.00 0.00 44.51 4.04
2289 7826 0.966920 AACGTCTCGTCCCACTGAAT 59.033 50.000 0.00 0.00 39.99 2.57
2301 7838 1.332686 CCACTGAATGCACATCGATGG 59.667 52.381 28.09 17.84 0.00 3.51
2304 7841 2.679837 ACTGAATGCACATCGATGGAAC 59.320 45.455 28.09 17.07 0.00 3.62
2306 7843 1.665679 GAATGCACATCGATGGAACGT 59.334 47.619 28.09 15.31 34.70 3.99
2309 7846 0.647410 GCACATCGATGGAACGTCTG 59.353 55.000 28.09 16.32 34.70 3.51
2318 7855 6.978343 TCGATGGAACGTCTGAAATAAATT 57.022 33.333 0.00 0.00 34.70 1.82
2321 7858 8.937884 TCGATGGAACGTCTGAAATAAATTTAA 58.062 29.630 1.21 0.00 34.70 1.52
2322 7859 9.549509 CGATGGAACGTCTGAAATAAATTTAAA 57.450 29.630 1.21 0.00 0.00 1.52
2346 7883 3.338818 AATGCGAACACTTGTGTCAAG 57.661 42.857 6.88 7.78 0.00 3.02
2352 7889 4.607955 CGAACACTTGTGTCAAGTCTAGA 58.392 43.478 11.47 0.00 0.00 2.43
2353 7890 5.041287 CGAACACTTGTGTCAAGTCTAGAA 58.959 41.667 11.47 0.00 0.00 2.10
2354 7891 5.174035 CGAACACTTGTGTCAAGTCTAGAAG 59.826 44.000 11.47 3.75 0.00 2.85
2355 7892 4.950050 ACACTTGTGTCAAGTCTAGAAGG 58.050 43.478 11.47 3.16 0.00 3.46
2356 7893 3.743396 CACTTGTGTCAAGTCTAGAAGGC 59.257 47.826 11.47 0.00 0.00 4.35
2357 7894 3.244249 ACTTGTGTCAAGTCTAGAAGGCC 60.244 47.826 9.00 0.00 0.00 5.19
2358 7895 2.609747 TGTGTCAAGTCTAGAAGGCCT 58.390 47.619 0.00 0.00 0.00 5.19
2359 7896 2.300152 TGTGTCAAGTCTAGAAGGCCTG 59.700 50.000 5.69 0.00 0.00 4.85
2360 7897 2.563179 GTGTCAAGTCTAGAAGGCCTGA 59.437 50.000 5.69 0.00 0.00 3.86
2361 7898 3.006967 GTGTCAAGTCTAGAAGGCCTGAA 59.993 47.826 5.69 0.00 0.00 3.02
2362 7899 3.646162 TGTCAAGTCTAGAAGGCCTGAAA 59.354 43.478 5.69 0.00 0.00 2.69
2363 7900 4.287067 TGTCAAGTCTAGAAGGCCTGAAAT 59.713 41.667 5.69 0.00 0.00 2.17
2364 7901 5.483937 TGTCAAGTCTAGAAGGCCTGAAATA 59.516 40.000 5.69 0.00 0.00 1.40
2365 7902 6.013725 TGTCAAGTCTAGAAGGCCTGAAATAA 60.014 38.462 5.69 0.00 0.00 1.40
2366 7903 6.879458 GTCAAGTCTAGAAGGCCTGAAATAAA 59.121 38.462 5.69 0.00 0.00 1.40
2367 7904 7.554476 GTCAAGTCTAGAAGGCCTGAAATAAAT 59.446 37.037 5.69 0.00 0.00 1.40
2368 7905 8.109634 TCAAGTCTAGAAGGCCTGAAATAAATT 58.890 33.333 5.69 0.00 0.00 1.82
2369 7906 8.401709 CAAGTCTAGAAGGCCTGAAATAAATTC 58.598 37.037 5.69 0.00 38.60 2.17
2370 7907 7.633789 AGTCTAGAAGGCCTGAAATAAATTCA 58.366 34.615 5.69 0.00 45.71 2.57
2387 7924 9.768662 AATAAATTCAGAGAAAATGCAAACACT 57.231 25.926 0.00 0.00 0.00 3.55
2388 7925 7.704789 AAATTCAGAGAAAATGCAAACACTC 57.295 32.000 0.00 0.00 0.00 3.51
2389 7926 4.472691 TCAGAGAAAATGCAAACACTCG 57.527 40.909 0.00 0.00 0.00 4.18
2390 7927 3.876914 TCAGAGAAAATGCAAACACTCGT 59.123 39.130 0.00 0.00 0.00 4.18
2391 7928 3.970610 CAGAGAAAATGCAAACACTCGTG 59.029 43.478 0.00 0.00 0.00 4.35
2393 7930 3.952535 AGAAAATGCAAACACTCGTGTC 58.047 40.909 2.81 0.00 44.13 3.67
2394 7931 3.627577 AGAAAATGCAAACACTCGTGTCT 59.372 39.130 2.81 0.00 44.13 3.41
2395 7932 4.814234 AGAAAATGCAAACACTCGTGTCTA 59.186 37.500 2.81 0.00 44.13 2.59
2396 7933 5.295787 AGAAAATGCAAACACTCGTGTCTAA 59.704 36.000 2.81 0.00 44.13 2.10
2397 7934 4.732285 AATGCAAACACTCGTGTCTAAG 57.268 40.909 2.81 0.00 44.13 2.18
2398 7935 3.173668 TGCAAACACTCGTGTCTAAGT 57.826 42.857 2.81 0.00 44.13 2.24
2399 7936 3.120792 TGCAAACACTCGTGTCTAAGTC 58.879 45.455 2.81 0.00 44.13 3.01
2400 7937 2.475487 GCAAACACTCGTGTCTAAGTCC 59.525 50.000 2.81 0.00 44.13 3.85
2401 7938 3.713288 CAAACACTCGTGTCTAAGTCCA 58.287 45.455 2.81 0.00 44.13 4.02
2402 7939 4.116961 CAAACACTCGTGTCTAAGTCCAA 58.883 43.478 2.81 0.00 44.13 3.53
2416 7953 2.050144 AGTCCAAGCCTTGAACTCTGA 58.950 47.619 5.89 0.00 0.00 3.27
2422 7959 0.034670 GCCTTGAACTCTGATGGGCT 60.035 55.000 0.00 0.00 35.73 5.19
2425 7962 2.630158 CTTGAACTCTGATGGGCTGAG 58.370 52.381 0.00 0.00 45.19 3.35
2432 7969 2.702478 CTCTGATGGGCTGAGAATACCA 59.298 50.000 0.00 0.00 43.14 3.25
2433 7970 3.321039 TCTGATGGGCTGAGAATACCAT 58.679 45.455 0.00 0.00 45.87 3.55
2434 7971 3.718434 TCTGATGGGCTGAGAATACCATT 59.282 43.478 0.00 0.00 43.40 3.16
2435 7972 4.907269 TCTGATGGGCTGAGAATACCATTA 59.093 41.667 0.00 0.00 43.40 1.90
2438 7975 6.240894 TGATGGGCTGAGAATACCATTATTC 58.759 40.000 0.00 0.00 43.40 1.75
2452 7989 6.192970 ACCATTATTCTCCTAACCATCCAG 57.807 41.667 0.00 0.00 0.00 3.86
2455 7992 3.567478 ATTCTCCTAACCATCCAGCAC 57.433 47.619 0.00 0.00 0.00 4.40
2461 7998 3.585289 TCCTAACCATCCAGCACAAGTTA 59.415 43.478 0.00 0.00 0.00 2.24
2499 10104 3.741344 GGCTGCTAATATGTACGTCCAAG 59.259 47.826 0.00 0.00 0.00 3.61
2501 10106 3.377439 TGCTAATATGTACGTCCAAGCG 58.623 45.455 0.00 0.00 37.94 4.68
2511 10117 3.611674 TCCAAGCGACGGTGCTCA 61.612 61.111 0.00 0.00 46.60 4.26
2519 10125 4.814900 ACGGTGCTCATCGTCATC 57.185 55.556 1.90 0.00 46.40 2.92
2534 10140 3.054166 CGTCATCTTAAACGTGGACACA 58.946 45.455 3.12 0.00 34.30 3.72
2536 10142 4.151689 CGTCATCTTAAACGTGGACACATT 59.848 41.667 3.12 0.14 34.30 2.71
2558 10164 1.812571 GTGTTCCGCCAGTTTGATCAT 59.187 47.619 0.00 0.00 0.00 2.45
2565 10171 4.635765 TCCGCCAGTTTGATCATTTTCTAG 59.364 41.667 0.00 0.00 0.00 2.43
2567 10173 4.676546 GCCAGTTTGATCATTTTCTAGGC 58.323 43.478 0.00 0.78 0.00 3.93
2569 10175 4.201950 CCAGTTTGATCATTTTCTAGGCCG 60.202 45.833 0.00 0.00 0.00 6.13
2571 10177 5.584649 CAGTTTGATCATTTTCTAGGCCGTA 59.415 40.000 0.00 0.00 0.00 4.02
2572 10178 6.093495 CAGTTTGATCATTTTCTAGGCCGTAA 59.907 38.462 0.00 0.00 0.00 3.18
2573 10179 6.657541 AGTTTGATCATTTTCTAGGCCGTAAA 59.342 34.615 0.00 0.00 0.00 2.01
2574 10180 7.175990 AGTTTGATCATTTTCTAGGCCGTAAAA 59.824 33.333 13.10 13.10 0.00 1.52
2575 10181 7.455641 TTGATCATTTTCTAGGCCGTAAAAA 57.544 32.000 14.25 13.39 0.00 1.94
2622 10234 4.758822 TCCCGAGGAAATTATATCTCCCA 58.241 43.478 0.00 0.00 0.00 4.37
2623 10235 4.530946 TCCCGAGGAAATTATATCTCCCAC 59.469 45.833 0.00 0.00 0.00 4.61
2624 10236 4.286032 CCCGAGGAAATTATATCTCCCACA 59.714 45.833 0.00 0.00 0.00 4.17
2625 10237 5.238583 CCGAGGAAATTATATCTCCCACAC 58.761 45.833 0.00 0.00 0.00 3.82
2626 10238 5.221641 CCGAGGAAATTATATCTCCCACACA 60.222 44.000 0.00 0.00 0.00 3.72
2627 10239 6.288294 CGAGGAAATTATATCTCCCACACAA 58.712 40.000 0.00 0.00 0.00 3.33
2629 10241 7.041780 CGAGGAAATTATATCTCCCACACAAAG 60.042 40.741 0.00 0.00 0.00 2.77
2630 10242 7.872138 AGGAAATTATATCTCCCACACAAAGA 58.128 34.615 0.00 0.00 0.00 2.52
2632 10244 8.966868 GGAAATTATATCTCCCACACAAAGAAA 58.033 33.333 0.00 0.00 0.00 2.52
2672 10284 5.523438 ACTATGTCTAGCTAGTTTGGCTC 57.477 43.478 20.10 4.83 40.74 4.70
2675 10287 7.007723 ACTATGTCTAGCTAGTTTGGCTCTAT 58.992 38.462 20.10 5.87 40.74 1.98
2678 10290 5.894393 TGTCTAGCTAGTTTGGCTCTATTCT 59.106 40.000 20.10 0.00 40.74 2.40
2679 10291 6.183360 TGTCTAGCTAGTTTGGCTCTATTCTG 60.183 42.308 20.10 0.00 40.74 3.02
2680 10292 5.894393 TCTAGCTAGTTTGGCTCTATTCTGT 59.106 40.000 20.10 0.00 40.74 3.41
2681 10293 7.013464 GTCTAGCTAGTTTGGCTCTATTCTGTA 59.987 40.741 20.10 0.00 40.74 2.74
2682 10294 6.155475 AGCTAGTTTGGCTCTATTCTGTAG 57.845 41.667 0.00 0.00 34.70 2.74
2683 10295 5.069781 AGCTAGTTTGGCTCTATTCTGTAGG 59.930 44.000 0.00 0.00 34.70 3.18
2684 10296 4.762289 AGTTTGGCTCTATTCTGTAGGG 57.238 45.455 0.00 0.00 0.00 3.53
2685 10297 4.362677 AGTTTGGCTCTATTCTGTAGGGA 58.637 43.478 0.00 0.00 0.00 4.20
2686 10298 4.783227 AGTTTGGCTCTATTCTGTAGGGAA 59.217 41.667 0.00 0.00 0.00 3.97
2687 10299 5.104735 AGTTTGGCTCTATTCTGTAGGGAAG 60.105 44.000 0.00 0.00 0.00 3.46
2688 10300 4.265856 TGGCTCTATTCTGTAGGGAAGA 57.734 45.455 0.00 0.00 0.00 2.87
2708 10320 0.541392 TGCAGCGGATTAGTGGACAT 59.459 50.000 0.00 0.00 0.00 3.06
2736 10351 4.530857 GTCCCGACCCATGCTCCG 62.531 72.222 0.00 0.00 0.00 4.63
2738 10353 4.838152 CCCGACCCATGCTCCGTG 62.838 72.222 0.00 0.00 0.00 4.94
2741 10356 1.884464 CGACCCATGCTCCGTGATG 60.884 63.158 0.00 0.00 0.00 3.07
2756 10371 6.403636 GCTCCGTGATGAACAGTAAAATCAAT 60.404 38.462 0.00 0.00 31.20 2.57
2809 10424 3.685139 TTTTGGGTGCAAACTTTGACA 57.315 38.095 5.65 0.75 0.00 3.58
2810 10425 3.685139 TTTGGGTGCAAACTTTGACAA 57.315 38.095 5.65 2.37 0.00 3.18
2811 10426 3.685139 TTGGGTGCAAACTTTGACAAA 57.315 38.095 5.65 0.00 0.00 2.83
2812 10427 3.902881 TGGGTGCAAACTTTGACAAAT 57.097 38.095 5.65 0.00 0.00 2.32
2813 10428 3.529533 TGGGTGCAAACTTTGACAAATG 58.470 40.909 5.65 0.00 0.00 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 3.442273 GGACGGGCATATTCTTTGAACAA 59.558 43.478 0.00 0.00 0.00 2.83
58 59 9.360093 CTATTCATGATAGAAATAGGAACGGAC 57.640 37.037 0.00 0.00 40.20 4.79
65 66 7.323420 TGCGGACTATTCATGATAGAAATAGG 58.677 38.462 13.42 1.23 40.20 2.57
75 76 5.012046 ACCTTATGATGCGGACTATTCATGA 59.988 40.000 0.00 0.00 31.59 3.07
83 84 2.039418 TGCTACCTTATGATGCGGACT 58.961 47.619 0.00 0.00 0.00 3.85
86 87 5.643348 TCAAATATGCTACCTTATGATGCGG 59.357 40.000 0.00 0.00 0.00 5.69
110 111 7.443879 ACCAAGACTGTTTTTGTTTCAATGTTT 59.556 29.630 5.61 0.00 0.00 2.83
114 115 6.696411 TGACCAAGACTGTTTTTGTTTCAAT 58.304 32.000 5.61 0.00 0.00 2.57
166 167 2.316108 CCTTTGCAAGGTTGTTACCCT 58.684 47.619 7.87 0.00 46.28 4.34
200 201 1.822990 CCTAAGGTTGTAGTCTGCCGA 59.177 52.381 0.00 0.00 0.00 5.54
211 212 4.559153 CCAAATTCAGTTGCCTAAGGTTG 58.441 43.478 0.00 0.00 0.00 3.77
284 285 5.441709 TTTGGGTCGACTCCATTAAAAAC 57.558 39.130 21.56 0.00 33.82 2.43
294 2729 0.395312 TGGGACTTTTGGGTCGACTC 59.605 55.000 16.46 12.99 37.12 3.36
325 2795 8.668510 AATGAAACTCACGATAAGAATATGCT 57.331 30.769 0.00 0.00 0.00 3.79
334 2804 5.344933 CACGAGTGAATGAAACTCACGATAA 59.655 40.000 0.00 0.00 39.18 1.75
335 2805 4.857037 CACGAGTGAATGAAACTCACGATA 59.143 41.667 0.00 0.00 39.18 2.92
355 2825 4.392921 ACCACATTCTTCTATCTCCACG 57.607 45.455 0.00 0.00 0.00 4.94
372 2842 4.816392 ACCAAAGTGACTTTTTGAACCAC 58.184 39.130 8.03 0.00 37.65 4.16
396 2866 2.723322 TAAGGCCACTAGAGCTCGTA 57.277 50.000 5.01 0.48 0.00 3.43
436 2907 0.753262 CCCTCAACTATCCCCTGTCG 59.247 60.000 0.00 0.00 0.00 4.35
485 2956 4.957296 TCGACTGAGCCTTAAAAAGTCTT 58.043 39.130 0.00 0.00 36.05 3.01
606 3077 4.820894 AGATAGTGTAGAAAACGCCCTT 57.179 40.909 0.00 0.00 39.57 3.95
643 3131 9.343994 ACTCCTTCTGTCCCATAATATGATAAT 57.656 33.333 1.10 0.00 0.00 1.28
648 3136 7.911651 ACATACTCCTTCTGTCCCATAATATG 58.088 38.462 0.00 0.00 0.00 1.78
649 3137 7.734865 TGACATACTCCTTCTGTCCCATAATAT 59.265 37.037 0.00 0.00 38.79 1.28
650 3138 7.015292 GTGACATACTCCTTCTGTCCCATAATA 59.985 40.741 0.00 0.00 38.79 0.98
706 3194 1.824230 ACTCAAACTGCCAGCACAAAA 59.176 42.857 0.00 0.00 0.00 2.44
710 3198 0.595825 GCAACTCAAACTGCCAGCAC 60.596 55.000 0.00 0.00 32.18 4.40
795 3283 7.229506 AGTTTTTGCTAGCAGTTTCTTCTGTAT 59.770 33.333 18.45 0.00 37.70 2.29
797 3285 5.358160 AGTTTTTGCTAGCAGTTTCTTCTGT 59.642 36.000 18.45 0.00 37.70 3.41
811 3299 3.492756 GGCATTTGCGAAAGTTTTTGCTA 59.507 39.130 15.69 7.44 45.65 3.49
873 3361 5.838955 TGAAAGTCACTCTAGGGGATTCTA 58.161 41.667 0.00 0.00 0.00 2.10
945 3433 4.160329 ACTCTAGCGGATTCCATATTCCA 58.840 43.478 3.09 0.00 31.99 3.53
1000 3488 1.628846 AGTAGGTTTGGCGAAGTCCAT 59.371 47.619 7.30 0.00 34.07 3.41
1010 3498 2.811431 TGATTCGCAACAGTAGGTTTGG 59.189 45.455 0.00 0.00 37.72 3.28
1015 3503 7.254455 CCTTAACTTATGATTCGCAACAGTAGG 60.254 40.741 0.00 0.00 0.00 3.18
1049 3537 5.728637 AGATGTCAACCAGGGAAATTTTC 57.271 39.130 0.24 0.24 0.00 2.29
1062 3550 6.004574 ACTTTAGGAAAGGGAAGATGTCAAC 58.995 40.000 4.13 0.00 42.82 3.18
1084 6568 1.366319 AGGGCACATCTCAGGAAACT 58.634 50.000 0.00 0.00 46.44 2.66
1328 6865 2.527951 ATCTGCAGGAAGACGGCCAC 62.528 60.000 15.13 0.00 39.74 5.01
1338 6875 2.265739 GCCACACGATCTGCAGGA 59.734 61.111 15.13 0.57 0.00 3.86
1340 6877 2.104859 CAGGCCACACGATCTGCAG 61.105 63.158 7.63 7.63 0.00 4.41
1350 6887 3.635191 TGATGACGGCAGGCCACA 61.635 61.111 5.01 10.07 35.37 4.17
1361 6898 3.043586 CGTATAGACAAGCCGTGATGAC 58.956 50.000 0.00 0.00 0.00 3.06
1369 6906 0.318784 CGAGGCCGTATAGACAAGCC 60.319 60.000 9.91 9.91 42.49 4.35
1385 6922 1.173444 AGCCCCTGTAGCGATACGAG 61.173 60.000 6.32 5.01 34.64 4.18
1387 6924 1.007271 CAGCCCCTGTAGCGATACG 60.007 63.158 6.32 1.23 34.64 3.06
1394 6931 1.077429 GAAAGCCCAGCCCCTGTAG 60.077 63.158 0.00 0.00 0.00 2.74
1459 6996 0.525029 GCGACCAGTAGAAGCCGTAC 60.525 60.000 0.00 0.00 0.00 3.67
1461 6998 1.977544 AGCGACCAGTAGAAGCCGT 60.978 57.895 0.00 0.00 0.00 5.68
1489 7026 0.872021 GCTCCGCGTAGAACCTGATG 60.872 60.000 1.57 0.00 0.00 3.07
1528 7065 2.357034 TTGTCGGCGACTGCTTCC 60.357 61.111 36.17 12.75 42.25 3.46
1530 7067 3.044305 GCTTGTCGGCGACTGCTT 61.044 61.111 36.17 0.00 42.25 3.91
1546 7083 1.403972 CGCTTCCTACGTTGACGAGC 61.404 60.000 10.87 7.25 43.02 5.03
1549 7086 2.442188 GCCGCTTCCTACGTTGACG 61.442 63.158 0.00 1.41 46.33 4.35
1577 7114 3.011818 GGATCACAATGACACTGATGCA 58.988 45.455 0.00 0.00 34.03 3.96
1584 7121 1.086696 CACGGGGATCACAATGACAC 58.913 55.000 0.00 0.00 0.00 3.67
1591 7128 4.408821 GCCAGCACGGGGATCACA 62.409 66.667 0.00 0.00 34.06 3.58
1652 7189 2.513753 GACAATGATCACACCCACCAA 58.486 47.619 0.00 0.00 0.00 3.67
1654 7191 1.086696 CGACAATGATCACACCCACC 58.913 55.000 0.00 0.00 0.00 4.61
1655 7192 1.086696 CCGACAATGATCACACCCAC 58.913 55.000 0.00 0.00 0.00 4.61
1657 7194 1.376609 GGCCGACAATGATCACACCC 61.377 60.000 0.00 0.00 0.00 4.61
1660 7197 0.460109 CGAGGCCGACAATGATCACA 60.460 55.000 0.00 0.00 38.22 3.58
1661 7198 1.766143 GCGAGGCCGACAATGATCAC 61.766 60.000 0.00 0.00 38.22 3.06
1663 7200 2.247437 GGCGAGGCCGACAATGATC 61.247 63.158 0.00 0.00 44.91 2.92
1708 7245 2.910479 TCGCCATCTCCGCCGTAT 60.910 61.111 0.00 0.00 0.00 3.06
1712 7249 2.892425 CAAGTCGCCATCTCCGCC 60.892 66.667 0.00 0.00 0.00 6.13
1713 7250 2.125512 ACAAGTCGCCATCTCCGC 60.126 61.111 0.00 0.00 0.00 5.54
1728 7265 0.107508 CGTAGTAGACCCCTCCGACA 60.108 60.000 0.00 0.00 0.00 4.35
1737 7274 1.141234 GGTGGCAGCGTAGTAGACC 59.859 63.158 0.00 0.00 0.00 3.85
1739 7276 1.945354 GCTGGTGGCAGCGTAGTAGA 61.945 60.000 12.58 0.00 41.35 2.59
1785 7322 0.907704 TAGGCGTGGTGGAACAGGAT 60.908 55.000 0.00 0.00 41.80 3.24
1787 7324 1.375523 GTAGGCGTGGTGGAACAGG 60.376 63.158 0.00 0.00 41.80 4.00
1793 7330 1.340248 CTATACAGGTAGGCGTGGTGG 59.660 57.143 0.00 0.00 35.03 4.61
1808 7345 6.253727 CGGCCGAAATGAGTGAATATCTATAC 59.746 42.308 24.07 0.00 0.00 1.47
1810 7347 5.171476 CGGCCGAAATGAGTGAATATCTAT 58.829 41.667 24.07 0.00 0.00 1.98
1820 7357 4.957296 AGAAATATACGGCCGAAATGAGT 58.043 39.130 35.90 10.28 0.00 3.41
1821 7358 4.389077 GGAGAAATATACGGCCGAAATGAG 59.611 45.833 35.90 0.00 0.00 2.90
1826 7363 3.228453 AGAGGAGAAATATACGGCCGAA 58.772 45.455 35.90 17.45 0.00 4.30
1827 7364 2.872732 AGAGGAGAAATATACGGCCGA 58.127 47.619 35.90 16.57 0.00 5.54
1830 7367 6.091718 AGAGAAAGAGGAGAAATATACGGC 57.908 41.667 0.00 0.00 0.00 5.68
1831 7368 8.821894 CAAAAGAGAAAGAGGAGAAATATACGG 58.178 37.037 0.00 0.00 0.00 4.02
1832 7369 9.587772 TCAAAAGAGAAAGAGGAGAAATATACG 57.412 33.333 0.00 0.00 0.00 3.06
1837 7374 9.359653 TCAAATCAAAAGAGAAAGAGGAGAAAT 57.640 29.630 0.00 0.00 0.00 2.17
1838 7375 8.752005 TCAAATCAAAAGAGAAAGAGGAGAAA 57.248 30.769 0.00 0.00 0.00 2.52
1839 7376 8.930846 ATCAAATCAAAAGAGAAAGAGGAGAA 57.069 30.769 0.00 0.00 0.00 2.87
1840 7377 8.159447 TGATCAAATCAAAAGAGAAAGAGGAGA 58.841 33.333 0.00 0.00 36.11 3.71
1841 7378 8.332996 TGATCAAATCAAAAGAGAAAGAGGAG 57.667 34.615 0.00 0.00 36.11 3.69
1842 7379 8.159447 TCTGATCAAATCAAAAGAGAAAGAGGA 58.841 33.333 0.00 0.00 39.11 3.71
1843 7380 8.235905 GTCTGATCAAATCAAAAGAGAAAGAGG 58.764 37.037 0.00 0.00 39.11 3.69
1844 7381 8.235905 GGTCTGATCAAATCAAAAGAGAAAGAG 58.764 37.037 0.00 0.00 39.11 2.85
1845 7382 7.720957 TGGTCTGATCAAATCAAAAGAGAAAGA 59.279 33.333 0.00 0.00 39.11 2.52
1846 7383 7.806960 GTGGTCTGATCAAATCAAAAGAGAAAG 59.193 37.037 0.00 0.00 39.11 2.62
1847 7384 7.255590 GGTGGTCTGATCAAATCAAAAGAGAAA 60.256 37.037 0.00 0.00 39.11 2.52
1848 7385 6.207417 GGTGGTCTGATCAAATCAAAAGAGAA 59.793 38.462 0.00 0.00 39.11 2.87
1849 7386 5.707298 GGTGGTCTGATCAAATCAAAAGAGA 59.293 40.000 0.00 0.00 39.11 3.10
1850 7387 5.709164 AGGTGGTCTGATCAAATCAAAAGAG 59.291 40.000 0.00 0.00 39.11 2.85
1851 7388 5.474532 CAGGTGGTCTGATCAAATCAAAAGA 59.525 40.000 0.00 0.00 46.18 2.52
1852 7389 5.706916 CAGGTGGTCTGATCAAATCAAAAG 58.293 41.667 0.00 0.00 46.18 2.27
1853 7390 4.022068 GCAGGTGGTCTGATCAAATCAAAA 60.022 41.667 0.00 0.00 46.18 2.44
1870 7407 6.922957 ACAAATAAACACTTTGTATGCAGGTG 59.077 34.615 14.02 14.02 43.18 4.00
1901 7438 7.449086 TCCCGACAAATAAACACTTAATTTCCT 59.551 33.333 0.00 0.00 0.00 3.36
1907 7444 7.330900 TGTTTCCCGACAAATAAACACTTAA 57.669 32.000 0.00 0.00 37.02 1.85
1908 7445 6.939132 TGTTTCCCGACAAATAAACACTTA 57.061 33.333 0.00 0.00 37.02 2.24
1923 7460 1.269413 ACGTCTGTACTGTGTTTCCCG 60.269 52.381 0.00 0.00 0.00 5.14
1927 7464 5.413499 AGTGTTTACGTCTGTACTGTGTTT 58.587 37.500 0.00 0.00 0.00 2.83
1936 7473 6.916440 TGTATGTATGAGTGTTTACGTCTGT 58.084 36.000 0.00 0.00 0.00 3.41
1959 7496 9.730705 ATTGATAGGGATGAGTGTACATATTTG 57.269 33.333 0.00 0.00 0.00 2.32
1960 7497 9.730705 CATTGATAGGGATGAGTGTACATATTT 57.269 33.333 0.00 0.00 0.00 1.40
1961 7498 7.826252 GCATTGATAGGGATGAGTGTACATATT 59.174 37.037 0.00 0.00 0.00 1.28
1962 7499 7.038088 TGCATTGATAGGGATGAGTGTACATAT 60.038 37.037 0.00 0.00 0.00 1.78
1963 7500 6.269769 TGCATTGATAGGGATGAGTGTACATA 59.730 38.462 0.00 0.00 0.00 2.29
1964 7501 5.072193 TGCATTGATAGGGATGAGTGTACAT 59.928 40.000 0.00 0.00 0.00 2.29
1965 7502 4.408596 TGCATTGATAGGGATGAGTGTACA 59.591 41.667 0.00 0.00 0.00 2.90
1966 7503 4.752101 GTGCATTGATAGGGATGAGTGTAC 59.248 45.833 0.00 0.00 0.00 2.90
1976 7513 0.378257 GCGTGTGTGCATTGATAGGG 59.622 55.000 0.00 0.00 34.15 3.53
1977 7514 1.085893 TGCGTGTGTGCATTGATAGG 58.914 50.000 0.00 0.00 40.62 2.57
2003 7540 2.026262 TCTTGGAAGTGTTCATAGGGGC 60.026 50.000 0.00 0.00 0.00 5.80
2006 7543 5.047021 TCAGTCTCTTGGAAGTGTTCATAGG 60.047 44.000 0.00 0.00 0.00 2.57
2007 7544 6.030548 TCAGTCTCTTGGAAGTGTTCATAG 57.969 41.667 0.00 0.00 0.00 2.23
2008 7545 5.047021 CCTCAGTCTCTTGGAAGTGTTCATA 60.047 44.000 0.00 0.00 0.00 2.15
2009 7546 4.262808 CCTCAGTCTCTTGGAAGTGTTCAT 60.263 45.833 0.00 0.00 0.00 2.57
2011 7548 3.556004 CCCTCAGTCTCTTGGAAGTGTTC 60.556 52.174 0.00 0.00 0.00 3.18
2012 7549 2.370189 CCCTCAGTCTCTTGGAAGTGTT 59.630 50.000 0.00 0.00 0.00 3.32
2013 7550 1.974236 CCCTCAGTCTCTTGGAAGTGT 59.026 52.381 0.00 0.00 0.00 3.55
2014 7551 1.277557 CCCCTCAGTCTCTTGGAAGTG 59.722 57.143 0.00 0.00 0.00 3.16
2021 7558 2.183679 GATGTGTCCCCTCAGTCTCTT 58.816 52.381 0.00 0.00 0.00 2.85
2031 7568 5.233083 TGATCTCAATATGATGTGTCCCC 57.767 43.478 0.00 0.00 0.00 4.81
2032 7569 7.572523 TTTTGATCTCAATATGATGTGTCCC 57.427 36.000 0.00 0.00 35.55 4.46
2033 7570 9.459640 CATTTTTGATCTCAATATGATGTGTCC 57.540 33.333 0.00 0.00 35.55 4.02
2035 7572 8.692710 AGCATTTTTGATCTCAATATGATGTGT 58.307 29.630 14.67 1.54 35.55 3.72
2045 7582 7.487484 TGTGTGTTTAGCATTTTTGATCTCAA 58.513 30.769 0.00 0.00 0.00 3.02
2049 7586 5.119125 GCCTGTGTGTTTAGCATTTTTGATC 59.881 40.000 0.00 0.00 0.00 2.92
2052 7589 3.494251 GGCCTGTGTGTTTAGCATTTTTG 59.506 43.478 0.00 0.00 0.00 2.44
2053 7590 3.494223 GGGCCTGTGTGTTTAGCATTTTT 60.494 43.478 0.84 0.00 0.00 1.94
2054 7591 2.037121 GGGCCTGTGTGTTTAGCATTTT 59.963 45.455 0.84 0.00 0.00 1.82
2055 7592 1.618343 GGGCCTGTGTGTTTAGCATTT 59.382 47.619 0.84 0.00 0.00 2.32
2056 7593 1.256812 GGGCCTGTGTGTTTAGCATT 58.743 50.000 0.84 0.00 0.00 3.56
2057 7594 0.611896 GGGGCCTGTGTGTTTAGCAT 60.612 55.000 0.84 0.00 0.00 3.79
2058 7595 1.228429 GGGGCCTGTGTGTTTAGCA 60.228 57.895 0.84 0.00 0.00 3.49
2059 7596 0.611896 ATGGGGCCTGTGTGTTTAGC 60.612 55.000 0.84 0.00 0.00 3.09
2060 7597 1.923356 AATGGGGCCTGTGTGTTTAG 58.077 50.000 0.84 0.00 0.00 1.85
2061 7598 2.797786 GTAATGGGGCCTGTGTGTTTA 58.202 47.619 0.84 0.00 0.00 2.01
2062 7599 1.627864 GTAATGGGGCCTGTGTGTTT 58.372 50.000 0.84 0.00 0.00 2.83
2063 7600 0.608035 CGTAATGGGGCCTGTGTGTT 60.608 55.000 0.84 0.00 0.00 3.32
2064 7601 1.002624 CGTAATGGGGCCTGTGTGT 60.003 57.895 0.84 0.00 0.00 3.72
2065 7602 1.748879 CCGTAATGGGGCCTGTGTG 60.749 63.158 0.84 0.00 0.00 3.82
2066 7603 2.674754 CCGTAATGGGGCCTGTGT 59.325 61.111 0.84 0.00 0.00 3.72
2075 7612 4.145365 TGTATGGAAAGTCCCGTAATGG 57.855 45.455 0.00 0.00 35.03 3.16
2076 7613 6.542370 AGAATTGTATGGAAAGTCCCGTAATG 59.458 38.462 0.00 0.00 35.03 1.90
2077 7614 6.659824 AGAATTGTATGGAAAGTCCCGTAAT 58.340 36.000 0.00 0.00 35.03 1.89
2078 7615 6.057321 AGAATTGTATGGAAAGTCCCGTAA 57.943 37.500 0.00 0.00 35.03 3.18
2079 7616 5.424252 AGAGAATTGTATGGAAAGTCCCGTA 59.576 40.000 0.00 0.00 35.03 4.02
2080 7617 4.225267 AGAGAATTGTATGGAAAGTCCCGT 59.775 41.667 0.00 0.00 35.03 5.28
2081 7618 4.770795 AGAGAATTGTATGGAAAGTCCCG 58.229 43.478 0.00 0.00 35.03 5.14
2082 7619 5.126779 GGAGAGAATTGTATGGAAAGTCCC 58.873 45.833 0.00 0.00 35.03 4.46
2083 7620 4.811557 CGGAGAGAATTGTATGGAAAGTCC 59.188 45.833 0.00 0.00 36.96 3.85
2084 7621 4.271291 GCGGAGAGAATTGTATGGAAAGTC 59.729 45.833 0.00 0.00 0.00 3.01
2085 7622 4.192317 GCGGAGAGAATTGTATGGAAAGT 58.808 43.478 0.00 0.00 0.00 2.66
2086 7623 3.561725 GGCGGAGAGAATTGTATGGAAAG 59.438 47.826 0.00 0.00 0.00 2.62
2087 7624 3.541632 GGCGGAGAGAATTGTATGGAAA 58.458 45.455 0.00 0.00 0.00 3.13
2088 7625 2.158813 GGGCGGAGAGAATTGTATGGAA 60.159 50.000 0.00 0.00 0.00 3.53
2089 7626 1.416401 GGGCGGAGAGAATTGTATGGA 59.584 52.381 0.00 0.00 0.00 3.41
2090 7627 1.417890 AGGGCGGAGAGAATTGTATGG 59.582 52.381 0.00 0.00 0.00 2.74
2091 7628 2.548920 GGAGGGCGGAGAGAATTGTATG 60.549 54.545 0.00 0.00 0.00 2.39
2092 7629 1.694696 GGAGGGCGGAGAGAATTGTAT 59.305 52.381 0.00 0.00 0.00 2.29
2093 7630 1.120530 GGAGGGCGGAGAGAATTGTA 58.879 55.000 0.00 0.00 0.00 2.41
2094 7631 0.618968 AGGAGGGCGGAGAGAATTGT 60.619 55.000 0.00 0.00 0.00 2.71
2095 7632 0.543749 AAGGAGGGCGGAGAGAATTG 59.456 55.000 0.00 0.00 0.00 2.32
2096 7633 2.176247 TAAGGAGGGCGGAGAGAATT 57.824 50.000 0.00 0.00 0.00 2.17
2097 7634 2.407340 ATAAGGAGGGCGGAGAGAAT 57.593 50.000 0.00 0.00 0.00 2.40
2098 7635 2.176247 AATAAGGAGGGCGGAGAGAA 57.824 50.000 0.00 0.00 0.00 2.87
2099 7636 2.176247 AAATAAGGAGGGCGGAGAGA 57.824 50.000 0.00 0.00 0.00 3.10
2100 7637 2.170607 TGAAAATAAGGAGGGCGGAGAG 59.829 50.000 0.00 0.00 0.00 3.20
2101 7638 2.093128 GTGAAAATAAGGAGGGCGGAGA 60.093 50.000 0.00 0.00 0.00 3.71
2102 7639 2.289565 GTGAAAATAAGGAGGGCGGAG 58.710 52.381 0.00 0.00 0.00 4.63
2103 7640 1.064979 GGTGAAAATAAGGAGGGCGGA 60.065 52.381 0.00 0.00 0.00 5.54
2104 7641 1.389555 GGTGAAAATAAGGAGGGCGG 58.610 55.000 0.00 0.00 0.00 6.13
2105 7642 1.014352 CGGTGAAAATAAGGAGGGCG 58.986 55.000 0.00 0.00 0.00 6.13
2106 7643 1.389555 CCGGTGAAAATAAGGAGGGC 58.610 55.000 0.00 0.00 0.00 5.19
2107 7644 1.409661 CCCCGGTGAAAATAAGGAGGG 60.410 57.143 0.00 0.00 37.42 4.30
2108 7645 2.022238 GCCCCGGTGAAAATAAGGAGG 61.022 57.143 0.00 0.00 0.00 4.30
2109 7646 1.389555 GCCCCGGTGAAAATAAGGAG 58.610 55.000 0.00 0.00 0.00 3.69
2110 7647 0.393267 CGCCCCGGTGAAAATAAGGA 60.393 55.000 0.00 0.00 0.00 3.36
2111 7648 1.381165 CCGCCCCGGTGAAAATAAGG 61.381 60.000 0.00 0.00 42.73 2.69
2112 7649 1.381165 CCCGCCCCGGTGAAAATAAG 61.381 60.000 0.00 0.00 46.80 1.73
2113 7650 1.378778 CCCGCCCCGGTGAAAATAA 60.379 57.895 0.00 0.00 46.80 1.40
2114 7651 2.272797 CCCGCCCCGGTGAAAATA 59.727 61.111 0.00 0.00 46.80 1.40
2115 7652 3.653078 TCCCGCCCCGGTGAAAAT 61.653 61.111 0.00 0.00 46.80 1.82
2116 7653 4.646877 GTCCCGCCCCGGTGAAAA 62.647 66.667 0.00 0.00 46.80 2.29
2130 7667 2.367107 GGGGGAGGAAGGGAGTCC 60.367 72.222 0.00 0.00 38.03 3.85
2131 7668 0.342313 TAAGGGGGAGGAAGGGAGTC 59.658 60.000 0.00 0.00 0.00 3.36
2132 7669 0.804255 TTAAGGGGGAGGAAGGGAGT 59.196 55.000 0.00 0.00 0.00 3.85
2133 7670 2.058705 GATTAAGGGGGAGGAAGGGAG 58.941 57.143 0.00 0.00 0.00 4.30
2134 7671 1.346151 GGATTAAGGGGGAGGAAGGGA 60.346 57.143 0.00 0.00 0.00 4.20
2135 7672 1.149986 GGATTAAGGGGGAGGAAGGG 58.850 60.000 0.00 0.00 0.00 3.95
2136 7673 1.907240 TGGATTAAGGGGGAGGAAGG 58.093 55.000 0.00 0.00 0.00 3.46
2137 7674 5.663158 TTATTGGATTAAGGGGGAGGAAG 57.337 43.478 0.00 0.00 0.00 3.46
2138 7675 6.622003 ATTTATTGGATTAAGGGGGAGGAA 57.378 37.500 0.00 0.00 0.00 3.36
2139 7676 7.355212 AGTTATTTATTGGATTAAGGGGGAGGA 59.645 37.037 0.00 0.00 0.00 3.71
2140 7677 7.451566 CAGTTATTTATTGGATTAAGGGGGAGG 59.548 40.741 0.00 0.00 0.00 4.30
2141 7678 8.004801 ACAGTTATTTATTGGATTAAGGGGGAG 58.995 37.037 0.00 0.00 0.00 4.30
2142 7679 7.889178 ACAGTTATTTATTGGATTAAGGGGGA 58.111 34.615 0.00 0.00 0.00 4.81
2143 7680 7.782644 TGACAGTTATTTATTGGATTAAGGGGG 59.217 37.037 0.00 0.00 0.00 5.40
2144 7681 8.760980 TGACAGTTATTTATTGGATTAAGGGG 57.239 34.615 0.00 0.00 0.00 4.79
2151 7688 9.685276 TCTTGACATGACAGTTATTTATTGGAT 57.315 29.630 0.00 0.00 0.00 3.41
2152 7689 9.685276 ATCTTGACATGACAGTTATTTATTGGA 57.315 29.630 0.00 0.00 0.00 3.53
2157 7694 9.109393 GGCTAATCTTGACATGACAGTTATTTA 57.891 33.333 0.00 0.00 0.00 1.40
2158 7695 7.831193 AGGCTAATCTTGACATGACAGTTATTT 59.169 33.333 0.00 0.00 0.00 1.40
2159 7696 7.281774 CAGGCTAATCTTGACATGACAGTTATT 59.718 37.037 0.00 3.64 0.00 1.40
2160 7697 6.765036 CAGGCTAATCTTGACATGACAGTTAT 59.235 38.462 0.00 0.00 0.00 1.89
2161 7698 6.108687 CAGGCTAATCTTGACATGACAGTTA 58.891 40.000 0.00 0.22 0.00 2.24
2162 7699 4.940046 CAGGCTAATCTTGACATGACAGTT 59.060 41.667 0.00 0.00 0.00 3.16
2163 7700 4.019860 ACAGGCTAATCTTGACATGACAGT 60.020 41.667 0.00 0.00 0.00 3.55
2164 7701 4.511527 ACAGGCTAATCTTGACATGACAG 58.488 43.478 0.00 0.00 0.00 3.51
2165 7702 4.558226 ACAGGCTAATCTTGACATGACA 57.442 40.909 0.00 0.00 0.00 3.58
2166 7703 6.017605 CCATTACAGGCTAATCTTGACATGAC 60.018 42.308 0.00 0.00 0.00 3.06
2167 7704 6.057533 CCATTACAGGCTAATCTTGACATGA 58.942 40.000 0.00 0.00 0.00 3.07
2168 7705 5.824624 ACCATTACAGGCTAATCTTGACATG 59.175 40.000 0.00 0.00 0.00 3.21
2169 7706 6.006275 ACCATTACAGGCTAATCTTGACAT 57.994 37.500 0.00 0.00 0.00 3.06
2170 7707 5.428253 GACCATTACAGGCTAATCTTGACA 58.572 41.667 0.00 0.00 0.00 3.58
2171 7708 4.816925 GGACCATTACAGGCTAATCTTGAC 59.183 45.833 0.00 0.00 0.00 3.18
2172 7709 4.721776 AGGACCATTACAGGCTAATCTTGA 59.278 41.667 0.00 0.00 0.00 3.02
2173 7710 4.818546 CAGGACCATTACAGGCTAATCTTG 59.181 45.833 0.00 0.00 0.00 3.02
2174 7711 4.475016 ACAGGACCATTACAGGCTAATCTT 59.525 41.667 0.00 0.00 0.00 2.40
2175 7712 4.040755 ACAGGACCATTACAGGCTAATCT 58.959 43.478 0.00 0.00 0.00 2.40
2176 7713 4.423625 ACAGGACCATTACAGGCTAATC 57.576 45.455 0.00 0.00 0.00 1.75
2177 7714 5.968676 TTACAGGACCATTACAGGCTAAT 57.031 39.130 0.00 0.00 0.00 1.73
2178 7715 5.163237 GGATTACAGGACCATTACAGGCTAA 60.163 44.000 0.00 0.00 0.00 3.09
2179 7716 4.347000 GGATTACAGGACCATTACAGGCTA 59.653 45.833 0.00 0.00 0.00 3.93
2180 7717 3.136626 GGATTACAGGACCATTACAGGCT 59.863 47.826 0.00 0.00 0.00 4.58
2181 7718 3.136626 AGGATTACAGGACCATTACAGGC 59.863 47.826 0.00 0.00 0.00 4.85
2182 7719 5.368989 GAAGGATTACAGGACCATTACAGG 58.631 45.833 0.00 0.00 0.00 4.00
2183 7720 5.050490 CGAAGGATTACAGGACCATTACAG 58.950 45.833 0.00 0.00 0.00 2.74
2184 7721 4.468510 ACGAAGGATTACAGGACCATTACA 59.531 41.667 0.00 0.00 0.00 2.41
2185 7722 5.019785 ACGAAGGATTACAGGACCATTAC 57.980 43.478 0.00 0.00 0.00 1.89
2186 7723 5.188163 TCAACGAAGGATTACAGGACCATTA 59.812 40.000 0.00 0.00 0.00 1.90
2187 7724 4.019681 TCAACGAAGGATTACAGGACCATT 60.020 41.667 0.00 0.00 0.00 3.16
2188 7725 3.517901 TCAACGAAGGATTACAGGACCAT 59.482 43.478 0.00 0.00 0.00 3.55
2189 7726 2.901192 TCAACGAAGGATTACAGGACCA 59.099 45.455 0.00 0.00 0.00 4.02
2190 7727 3.604875 TCAACGAAGGATTACAGGACC 57.395 47.619 0.00 0.00 0.00 4.46
2191 7728 4.504858 ACATCAACGAAGGATTACAGGAC 58.495 43.478 0.00 0.00 0.00 3.85
2192 7729 4.819105 ACATCAACGAAGGATTACAGGA 57.181 40.909 0.00 0.00 0.00 3.86
2193 7730 4.508124 GCTACATCAACGAAGGATTACAGG 59.492 45.833 0.00 0.00 0.00 4.00
2194 7731 5.109210 TGCTACATCAACGAAGGATTACAG 58.891 41.667 0.00 0.00 0.00 2.74
2195 7732 5.079689 TGCTACATCAACGAAGGATTACA 57.920 39.130 0.00 0.00 0.00 2.41
2196 7733 6.422223 CAATGCTACATCAACGAAGGATTAC 58.578 40.000 0.00 0.00 30.12 1.89
2197 7734 5.007626 GCAATGCTACATCAACGAAGGATTA 59.992 40.000 0.00 0.00 30.12 1.75
2198 7735 4.201950 GCAATGCTACATCAACGAAGGATT 60.202 41.667 0.00 0.00 31.15 3.01
2199 7736 3.313526 GCAATGCTACATCAACGAAGGAT 59.686 43.478 0.00 0.00 0.00 3.24
2200 7737 2.677836 GCAATGCTACATCAACGAAGGA 59.322 45.455 0.00 0.00 0.00 3.36
2201 7738 2.223340 GGCAATGCTACATCAACGAAGG 60.223 50.000 4.82 0.00 0.00 3.46
2202 7739 2.537529 CGGCAATGCTACATCAACGAAG 60.538 50.000 4.82 0.00 0.00 3.79
2203 7740 1.396648 CGGCAATGCTACATCAACGAA 59.603 47.619 4.82 0.00 0.00 3.85
2204 7741 1.006086 CGGCAATGCTACATCAACGA 58.994 50.000 4.82 0.00 0.00 3.85
2205 7742 0.726827 ACGGCAATGCTACATCAACG 59.273 50.000 4.82 0.00 0.00 4.10
2206 7743 3.303990 CCATACGGCAATGCTACATCAAC 60.304 47.826 4.82 0.00 0.00 3.18
2207 7744 2.877786 CCATACGGCAATGCTACATCAA 59.122 45.455 4.82 0.00 0.00 2.57
2208 7745 2.103941 TCCATACGGCAATGCTACATCA 59.896 45.455 4.82 0.00 0.00 3.07
2209 7746 2.738846 CTCCATACGGCAATGCTACATC 59.261 50.000 4.82 0.00 0.00 3.06
2210 7747 2.368548 TCTCCATACGGCAATGCTACAT 59.631 45.455 4.82 0.00 0.00 2.29
2211 7748 1.760029 TCTCCATACGGCAATGCTACA 59.240 47.619 4.82 0.00 0.00 2.74
2212 7749 2.526304 TCTCCATACGGCAATGCTAC 57.474 50.000 4.82 0.00 0.00 3.58
2213 7750 3.070878 TCAATCTCCATACGGCAATGCTA 59.929 43.478 4.82 0.00 0.00 3.49
2214 7751 2.158769 TCAATCTCCATACGGCAATGCT 60.159 45.455 4.82 0.00 0.00 3.79
2215 7752 2.031682 GTCAATCTCCATACGGCAATGC 60.032 50.000 0.00 0.00 0.00 3.56
2216 7753 2.221749 CGTCAATCTCCATACGGCAATG 59.778 50.000 0.00 0.00 0.00 2.82
2217 7754 2.102420 TCGTCAATCTCCATACGGCAAT 59.898 45.455 0.00 0.00 36.08 3.56
2218 7755 1.478916 TCGTCAATCTCCATACGGCAA 59.521 47.619 0.00 0.00 36.08 4.52
2219 7756 1.107945 TCGTCAATCTCCATACGGCA 58.892 50.000 0.00 0.00 36.08 5.69
2220 7757 2.128035 CTTCGTCAATCTCCATACGGC 58.872 52.381 0.00 0.00 36.08 5.68
2221 7758 3.372954 GACTTCGTCAATCTCCATACGG 58.627 50.000 0.00 0.00 36.08 4.02
2222 7759 3.036633 CGACTTCGTCAATCTCCATACG 58.963 50.000 0.00 0.00 36.71 3.06
2223 7760 2.789893 GCGACTTCGTCAATCTCCATAC 59.210 50.000 0.00 0.00 42.22 2.39
2224 7761 2.223735 GGCGACTTCGTCAATCTCCATA 60.224 50.000 0.00 0.00 44.43 2.74
2225 7762 1.471676 GGCGACTTCGTCAATCTCCAT 60.472 52.381 0.00 0.00 44.43 3.41
2226 7763 0.108804 GGCGACTTCGTCAATCTCCA 60.109 55.000 0.00 0.00 44.43 3.86
2227 7764 2.666989 GGCGACTTCGTCAATCTCC 58.333 57.895 0.00 0.00 44.43 3.71
2249 7786 5.277490 CGTTCCCATCGACTATAAAGACGTA 60.277 44.000 0.00 0.00 40.91 3.57
2251 7788 3.973135 CGTTCCCATCGACTATAAAGACG 59.027 47.826 0.00 0.00 41.36 4.18
2258 7795 1.602851 CGAGACGTTCCCATCGACTAT 59.397 52.381 0.00 0.00 37.35 2.12
2273 7810 0.037326 TGCATTCAGTGGGACGAGAC 60.037 55.000 0.00 0.00 0.00 3.36
2274 7811 0.037326 GTGCATTCAGTGGGACGAGA 60.037 55.000 0.00 0.00 0.00 4.04
2278 7815 0.729116 CGATGTGCATTCAGTGGGAC 59.271 55.000 0.00 0.00 0.00 4.46
2289 7826 0.246360 AGACGTTCCATCGATGTGCA 59.754 50.000 23.27 4.83 34.70 4.57
2338 7875 2.300152 CAGGCCTTCTAGACTTGACACA 59.700 50.000 0.00 0.00 0.00 3.72
2346 7883 7.865706 TGAATTTATTTCAGGCCTTCTAGAC 57.134 36.000 0.00 0.00 39.44 2.59
2361 7898 9.768662 AGTGTTTGCATTTTCTCTGAATTTATT 57.231 25.926 0.00 0.00 0.00 1.40
2362 7899 9.415544 GAGTGTTTGCATTTTCTCTGAATTTAT 57.584 29.630 0.00 0.00 0.00 1.40
2363 7900 7.591057 CGAGTGTTTGCATTTTCTCTGAATTTA 59.409 33.333 0.00 0.00 0.00 1.40
2364 7901 6.418819 CGAGTGTTTGCATTTTCTCTGAATTT 59.581 34.615 0.00 0.00 0.00 1.82
2365 7902 5.916883 CGAGTGTTTGCATTTTCTCTGAATT 59.083 36.000 0.00 0.00 0.00 2.17
2366 7903 5.009010 ACGAGTGTTTGCATTTTCTCTGAAT 59.991 36.000 0.00 0.00 0.00 2.57
2367 7904 4.335315 ACGAGTGTTTGCATTTTCTCTGAA 59.665 37.500 0.00 0.00 0.00 3.02
2368 7905 3.876914 ACGAGTGTTTGCATTTTCTCTGA 59.123 39.130 0.00 0.00 0.00 3.27
2369 7906 3.970610 CACGAGTGTTTGCATTTTCTCTG 59.029 43.478 0.00 0.00 0.00 3.35
2370 7907 3.627577 ACACGAGTGTTTGCATTTTCTCT 59.372 39.130 2.62 0.00 41.83 3.10
2371 7908 3.952535 ACACGAGTGTTTGCATTTTCTC 58.047 40.909 2.62 0.00 41.83 2.87
2372 7909 3.627577 AGACACGAGTGTTTGCATTTTCT 59.372 39.130 10.42 0.00 45.05 2.52
2373 7910 3.952535 AGACACGAGTGTTTGCATTTTC 58.047 40.909 10.42 0.00 45.05 2.29
2374 7911 5.065988 ACTTAGACACGAGTGTTTGCATTTT 59.934 36.000 10.42 0.00 45.05 1.82
2375 7912 4.574828 ACTTAGACACGAGTGTTTGCATTT 59.425 37.500 10.42 0.00 45.05 2.32
2376 7913 4.127171 ACTTAGACACGAGTGTTTGCATT 58.873 39.130 10.42 0.00 45.05 3.56
2377 7914 3.728845 ACTTAGACACGAGTGTTTGCAT 58.271 40.909 10.42 0.00 45.05 3.96
2378 7915 3.120792 GACTTAGACACGAGTGTTTGCA 58.879 45.455 10.42 0.00 45.05 4.08
2379 7916 2.475487 GGACTTAGACACGAGTGTTTGC 59.525 50.000 10.42 0.00 45.05 3.68
2380 7917 3.713288 TGGACTTAGACACGAGTGTTTG 58.287 45.455 10.42 4.32 45.05 2.93
2381 7918 4.369182 CTTGGACTTAGACACGAGTGTTT 58.631 43.478 10.42 7.45 45.05 2.83
2382 7919 3.799232 GCTTGGACTTAGACACGAGTGTT 60.799 47.826 10.42 3.78 45.05 3.32
2384 7921 2.329379 GCTTGGACTTAGACACGAGTG 58.671 52.381 1.13 1.13 0.00 3.51
2385 7922 1.272769 GGCTTGGACTTAGACACGAGT 59.727 52.381 0.00 0.00 0.00 4.18
2386 7923 1.546476 AGGCTTGGACTTAGACACGAG 59.454 52.381 0.00 0.00 0.00 4.18
2387 7924 1.629043 AGGCTTGGACTTAGACACGA 58.371 50.000 0.00 0.00 0.00 4.35
2388 7925 2.069273 CAAGGCTTGGACTTAGACACG 58.931 52.381 19.55 0.00 0.00 4.49
2389 7926 3.402628 TCAAGGCTTGGACTTAGACAC 57.597 47.619 25.92 0.00 0.00 3.67
2390 7927 3.740115 GTTCAAGGCTTGGACTTAGACA 58.260 45.455 27.73 3.50 36.20 3.41
2397 7934 2.550830 TCAGAGTTCAAGGCTTGGAC 57.449 50.000 27.77 27.77 39.55 4.02
2398 7935 2.290514 CCATCAGAGTTCAAGGCTTGGA 60.291 50.000 25.92 16.40 0.00 3.53
2399 7936 2.089980 CCATCAGAGTTCAAGGCTTGG 58.910 52.381 25.92 9.74 0.00 3.61
2400 7937 2.089980 CCCATCAGAGTTCAAGGCTTG 58.910 52.381 21.17 21.17 0.00 4.01
2401 7938 1.615384 GCCCATCAGAGTTCAAGGCTT 60.615 52.381 0.00 0.00 36.00 4.35
2402 7939 0.034670 GCCCATCAGAGTTCAAGGCT 60.035 55.000 0.00 0.00 36.00 4.58
2425 7962 8.383175 TGGATGGTTAGGAGAATAATGGTATTC 58.617 37.037 0.00 0.00 44.14 1.75
2432 7969 5.132648 TGTGCTGGATGGTTAGGAGAATAAT 59.867 40.000 0.00 0.00 0.00 1.28
2433 7970 4.473196 TGTGCTGGATGGTTAGGAGAATAA 59.527 41.667 0.00 0.00 0.00 1.40
2434 7971 4.037222 TGTGCTGGATGGTTAGGAGAATA 58.963 43.478 0.00 0.00 0.00 1.75
2435 7972 2.846206 TGTGCTGGATGGTTAGGAGAAT 59.154 45.455 0.00 0.00 0.00 2.40
2438 7975 2.026822 ACTTGTGCTGGATGGTTAGGAG 60.027 50.000 0.00 0.00 0.00 3.69
2440 7977 2.496899 ACTTGTGCTGGATGGTTAGG 57.503 50.000 0.00 0.00 0.00 2.69
2444 7981 3.412386 GAACTAACTTGTGCTGGATGGT 58.588 45.455 0.00 0.00 0.00 3.55
2452 7989 0.948678 TTGGCGGAACTAACTTGTGC 59.051 50.000 0.00 0.00 0.00 4.57
2455 7992 4.142687 CCTGTTATTGGCGGAACTAACTTG 60.143 45.833 0.00 0.00 0.00 3.16
2461 7998 2.868253 GCCTGTTATTGGCGGAACT 58.132 52.632 0.00 0.00 41.03 3.01
2504 10109 3.000322 CGTTTAAGATGACGATGAGCACC 60.000 47.826 0.00 0.00 41.53 5.01
2507 10112 3.000322 CCACGTTTAAGATGACGATGAGC 60.000 47.826 4.52 0.00 41.53 4.26
2508 10113 4.265556 GTCCACGTTTAAGATGACGATGAG 59.734 45.833 4.52 0.00 41.53 2.90
2511 10117 3.924686 GTGTCCACGTTTAAGATGACGAT 59.075 43.478 4.52 0.00 41.53 3.73
2534 10140 3.134574 TCAAACTGGCGGAACACTAAT 57.865 42.857 0.00 0.00 0.00 1.73
2536 10142 2.037902 TGATCAAACTGGCGGAACACTA 59.962 45.455 0.00 0.00 0.00 2.74
2543 10149 3.855689 AGAAAATGATCAAACTGGCGG 57.144 42.857 0.00 0.00 0.00 6.13
2544 10150 4.731773 GCCTAGAAAATGATCAAACTGGCG 60.732 45.833 0.00 0.00 0.00 5.69
2573 10179 5.754890 GGAACAATCACAGCAAGACATTTTT 59.245 36.000 0.00 0.00 0.00 1.94
2574 10180 5.163426 TGGAACAATCACAGCAAGACATTTT 60.163 36.000 0.00 0.00 31.92 1.82
2575 10181 4.341806 TGGAACAATCACAGCAAGACATTT 59.658 37.500 0.00 0.00 31.92 2.32
2576 10182 3.890756 TGGAACAATCACAGCAAGACATT 59.109 39.130 0.00 0.00 31.92 2.71
2578 10184 2.618241 GTGGAACAATCACAGCAAGACA 59.382 45.455 0.00 0.00 44.16 3.41
2579 10185 2.880890 AGTGGAACAATCACAGCAAGAC 59.119 45.455 0.00 0.00 44.16 3.01
2580 10186 3.213206 AGTGGAACAATCACAGCAAGA 57.787 42.857 0.00 0.00 44.16 3.02
2639 10251 9.292195 ACTAGCTAGACATAGTTTCTTATCTCC 57.708 37.037 27.45 0.00 0.00 3.71
2646 10258 6.155393 AGCCAAACTAGCTAGACATAGTTTCT 59.845 38.462 27.45 9.74 44.82 2.52
2649 10261 5.659079 AGAGCCAAACTAGCTAGACATAGTT 59.341 40.000 27.45 9.65 42.56 2.24
2655 10267 6.183360 ACAGAATAGAGCCAAACTAGCTAGAC 60.183 42.308 27.45 10.41 41.75 2.59
2667 10279 4.265856 TCTTCCCTACAGAATAGAGCCA 57.734 45.455 0.00 0.00 0.00 4.75
2672 10284 4.314121 GCTGCATCTTCCCTACAGAATAG 58.686 47.826 0.00 0.00 0.00 1.73
2675 10287 1.134699 CGCTGCATCTTCCCTACAGAA 60.135 52.381 0.00 0.00 0.00 3.02
2678 10290 0.975556 TCCGCTGCATCTTCCCTACA 60.976 55.000 0.00 0.00 0.00 2.74
2679 10291 0.394565 ATCCGCTGCATCTTCCCTAC 59.605 55.000 0.00 0.00 0.00 3.18
2680 10292 1.131638 AATCCGCTGCATCTTCCCTA 58.868 50.000 0.00 0.00 0.00 3.53
2681 10293 1.071385 CTAATCCGCTGCATCTTCCCT 59.929 52.381 0.00 0.00 0.00 4.20
2682 10294 1.202698 ACTAATCCGCTGCATCTTCCC 60.203 52.381 0.00 0.00 0.00 3.97
2683 10295 1.869767 CACTAATCCGCTGCATCTTCC 59.130 52.381 0.00 0.00 0.00 3.46
2684 10296 1.869767 CCACTAATCCGCTGCATCTTC 59.130 52.381 0.00 0.00 0.00 2.87
2685 10297 1.486310 TCCACTAATCCGCTGCATCTT 59.514 47.619 0.00 0.00 0.00 2.40
2686 10298 1.123077 TCCACTAATCCGCTGCATCT 58.877 50.000 0.00 0.00 0.00 2.90
2687 10299 1.221414 GTCCACTAATCCGCTGCATC 58.779 55.000 0.00 0.00 0.00 3.91
2688 10300 0.541392 TGTCCACTAATCCGCTGCAT 59.459 50.000 0.00 0.00 0.00 3.96
2708 10320 2.242965 TGGGTCGGGACAAGATACTCTA 59.757 50.000 0.75 0.00 0.00 2.43
2718 10330 3.399181 GGAGCATGGGTCGGGACA 61.399 66.667 0.75 0.00 0.00 4.02
2719 10331 4.530857 CGGAGCATGGGTCGGGAC 62.531 72.222 0.00 0.00 0.00 4.46
2726 10338 0.392863 TGTTCATCACGGAGCATGGG 60.393 55.000 0.00 0.00 0.00 4.00
2728 10340 1.730501 ACTGTTCATCACGGAGCATG 58.269 50.000 0.00 0.00 35.45 4.06
2788 10403 4.008074 TGTCAAAGTTTGCACCCAAAAA 57.992 36.364 10.90 0.00 42.19 1.94
2789 10404 3.685139 TGTCAAAGTTTGCACCCAAAA 57.315 38.095 10.90 0.00 42.19 2.44
2790 10405 3.685139 TTGTCAAAGTTTGCACCCAAA 57.315 38.095 10.90 0.00 38.56 3.28
2791 10406 3.685139 TTTGTCAAAGTTTGCACCCAA 57.315 38.095 10.90 7.93 0.00 4.12
2792 10407 3.529533 CATTTGTCAAAGTTTGCACCCA 58.470 40.909 10.90 2.42 0.00 4.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.