Multiple sequence alignment - TraesCS3B01G059300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G059300 chr3B 100.000 3591 0 0 1 3591 31057376 31060966 0.000000e+00 6632.0
1 TraesCS3B01G059300 chr3B 90.213 1645 110 29 1046 2651 31068241 31066609 0.000000e+00 2098.0
2 TraesCS3B01G059300 chr3B 78.868 530 66 21 446 940 31068895 31068377 2.080000e-82 316.0
3 TraesCS3B01G059300 chr3B 86.111 216 27 2 3228 3440 42693252 42693467 2.790000e-56 230.0
4 TraesCS3B01G059300 chr3B 92.063 63 5 0 446 508 691345607 691345545 4.940000e-14 89.8
5 TraesCS3B01G059300 chr3A 87.236 2319 173 66 434 2651 26827957 26830253 0.000000e+00 2529.0
6 TraesCS3B01G059300 chr3A 88.856 1714 133 24 964 2651 26872496 26870815 0.000000e+00 2054.0
7 TraesCS3B01G059300 chr3A 88.889 441 45 3 1 439 26827459 26827897 1.130000e-149 540.0
8 TraesCS3B01G059300 chr3A 92.857 56 4 0 2254 2309 95891687 95891742 8.260000e-12 82.4
9 TraesCS3B01G059300 chr3A 80.645 93 16 2 446 536 562880963 562881055 1.790000e-08 71.3
10 TraesCS3B01G059300 chr3D 88.258 2095 164 42 439 2472 19286604 19288677 0.000000e+00 2431.0
11 TraesCS3B01G059300 chr3D 89.201 1639 114 25 1037 2651 19302388 19300789 0.000000e+00 1988.0
12 TraesCS3B01G059300 chr3D 87.570 716 43 22 2454 3138 19290059 19290759 0.000000e+00 787.0
13 TraesCS3B01G059300 chr3D 90.930 441 35 4 1 440 19285532 19285968 3.990000e-164 588.0
14 TraesCS3B01G059300 chr2A 89.189 481 48 3 1337 1814 28200529 28200050 6.640000e-167 597.0
15 TraesCS3B01G059300 chr2A 86.408 309 36 5 3140 3443 618939 618632 2.070000e-87 333.0
16 TraesCS3B01G059300 chr7D 90.508 295 24 4 3150 3440 498258481 498258187 1.560000e-103 387.0
17 TraesCS3B01G059300 chr7D 86.957 92 11 1 449 539 69939514 69939423 6.340000e-18 102.0
18 TraesCS3B01G059300 chr1A 88.704 301 32 2 3140 3439 518771909 518772208 2.040000e-97 366.0
19 TraesCS3B01G059300 chr2D 91.534 189 14 1 1485 1671 613336810 613336622 3.560000e-65 259.0
20 TraesCS3B01G059300 chr6D 84.586 266 34 6 3147 3407 470930309 470930572 1.280000e-64 257.0
21 TraesCS3B01G059300 chr4A 82.333 300 47 4 3140 3438 507537198 507537492 4.600000e-64 255.0
22 TraesCS3B01G059300 chr4A 86.022 93 9 3 456 544 551130739 551130831 2.950000e-16 97.1
23 TraesCS3B01G059300 chr1D 88.360 189 20 1 1485 1671 419028818 419029006 3.610000e-55 226.0
24 TraesCS3B01G059300 chr7B 88.360 189 17 4 1485 1671 635886512 635886697 4.670000e-54 222.0
25 TraesCS3B01G059300 chr2B 77.622 286 55 8 3157 3437 789580218 789579937 7.980000e-37 165.0
26 TraesCS3B01G059300 chr2B 77.273 286 55 9 3157 3437 789600096 789599816 3.710000e-35 159.0
27 TraesCS3B01G059300 chr2B 76.923 286 57 8 3157 3437 789583217 789582936 1.730000e-33 154.0
28 TraesCS3B01G059300 chrUn 80.357 168 28 2 233 400 267451164 267451326 4.870000e-24 122.0
29 TraesCS3B01G059300 chrUn 80.357 168 28 2 233 400 339807917 339807755 4.870000e-24 122.0
30 TraesCS3B01G059300 chrUn 80.357 168 28 2 233 400 340254532 340254694 4.870000e-24 122.0
31 TraesCS3B01G059300 chr5B 80.357 168 28 2 233 400 392086063 392086225 4.870000e-24 122.0
32 TraesCS3B01G059300 chr5B 80.357 168 28 2 233 400 392126100 392126262 4.870000e-24 122.0
33 TraesCS3B01G059300 chr4D 87.879 99 10 1 434 532 342716928 342717024 8.150000e-22 115.0
34 TraesCS3B01G059300 chr7A 86.364 66 9 0 449 514 76513727 76513662 4.970000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G059300 chr3B 31057376 31060966 3590 False 6632.000000 6632 100.000000 1 3591 1 chr3B.!!$F1 3590
1 TraesCS3B01G059300 chr3B 31066609 31068895 2286 True 1207.000000 2098 84.540500 446 2651 2 chr3B.!!$R2 2205
2 TraesCS3B01G059300 chr3A 26870815 26872496 1681 True 2054.000000 2054 88.856000 964 2651 1 chr3A.!!$R1 1687
3 TraesCS3B01G059300 chr3A 26827459 26830253 2794 False 1534.500000 2529 88.062500 1 2651 2 chr3A.!!$F3 2650
4 TraesCS3B01G059300 chr3D 19300789 19302388 1599 True 1988.000000 1988 89.201000 1037 2651 1 chr3D.!!$R1 1614
5 TraesCS3B01G059300 chr3D 19285532 19290759 5227 False 1268.666667 2431 88.919333 1 3138 3 chr3D.!!$F1 3137

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
798 1501 0.181114 AGCAATATCGAGCTTGGGCA 59.819 50.0 0.0 0.0 38.01 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2678 4945 0.035458 AGGCAGCGAGCTTACAAAGT 59.965 50.0 0.0 0.0 44.79 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 5.079689 TGTTTGAGCGACAGGTAATATGA 57.920 39.130 0.00 0.00 0.00 2.15
198 201 1.384222 CGCCTTAATTGCCCCACCTC 61.384 60.000 0.00 0.00 0.00 3.85
204 207 4.105697 CCTTAATTGCCCCACCTCCTATTA 59.894 45.833 0.00 0.00 0.00 0.98
206 209 3.595190 ATTGCCCCACCTCCTATTAAC 57.405 47.619 0.00 0.00 0.00 2.01
218 222 9.627123 CCACCTCCTATTAACTTATCATTTTCA 57.373 33.333 0.00 0.00 0.00 2.69
247 251 6.318648 TGATAAAGCCAATAAGTGCTTACCAG 59.681 38.462 0.00 0.00 46.58 4.00
536 1205 4.897025 ACAGATACGTAGAACACTAGCC 57.103 45.455 0.08 0.00 0.00 3.93
554 1229 2.043227 GCCACTATAAGACCTGGAGCT 58.957 52.381 0.00 0.00 0.00 4.09
610 1285 2.233271 CAGAGCCCAAAGTTGACATGT 58.767 47.619 0.00 0.00 0.00 3.21
616 1291 3.068024 GCCCAAAGTTGACATGTCTTTCA 59.932 43.478 25.55 4.05 30.41 2.69
629 1304 5.821470 ACATGTCTTTCAGGCAGATTAGATG 59.179 40.000 0.00 0.00 30.91 2.90
667 1347 5.698741 ATGTGATTGTGGGATGAAGACTA 57.301 39.130 0.00 0.00 0.00 2.59
675 1355 5.982356 TGTGGGATGAAGACTAAAGAGATG 58.018 41.667 0.00 0.00 0.00 2.90
708 1396 0.942962 GCATATGCTGTGCTGGACTC 59.057 55.000 20.64 0.00 39.45 3.36
719 1407 0.761187 GCTGGACTCCTGGATATGCA 59.239 55.000 0.00 0.00 0.00 3.96
720 1408 1.542108 GCTGGACTCCTGGATATGCAC 60.542 57.143 0.00 0.00 0.00 4.57
729 1417 2.158564 CCTGGATATGCACCAATCACCT 60.159 50.000 0.00 0.00 36.95 4.00
796 1499 3.111853 TGTAGCAATATCGAGCTTGGG 57.888 47.619 1.94 0.00 42.05 4.12
798 1501 0.181114 AGCAATATCGAGCTTGGGCA 59.819 50.000 0.00 0.00 38.01 5.36
815 1518 1.724582 GCACTTTGACCTGCGGTGTT 61.725 55.000 4.94 0.00 35.25 3.32
897 1602 9.949174 GCAAGTTAATTACTACTACTAGTCCTC 57.051 37.037 0.00 0.00 35.54 3.71
907 1616 3.758088 CTAGTCCTCGCGCGCATGT 62.758 63.158 32.61 10.85 0.00 3.21
918 1627 0.852777 CGCGCATGTTAATACGCTCT 59.147 50.000 8.75 0.00 44.75 4.09
930 1639 8.193250 TGTTAATACGCTCTAGTTTTGGAATC 57.807 34.615 0.00 0.00 0.00 2.52
961 1693 5.904362 TCGTGATAAGATCGATCCATCAT 57.096 39.130 28.95 16.53 33.81 2.45
980 1743 7.403231 TCCATCATCCCTTCTATAAATACCTCC 59.597 40.741 0.00 0.00 0.00 4.30
1005 1779 3.947834 CCAGATACATCTTCCCCACAAAC 59.052 47.826 0.00 0.00 34.22 2.93
1007 1781 3.591527 AGATACATCTTCCCCACAAACCA 59.408 43.478 0.00 0.00 31.97 3.67
1026 1800 1.064952 CAAACAAGAACACACCGACCC 59.935 52.381 0.00 0.00 0.00 4.46
1035 1809 0.955428 CACACCGACCCACCATTGAG 60.955 60.000 0.00 0.00 0.00 3.02
1039 1813 0.324943 CCGACCCACCATTGAGAAGT 59.675 55.000 0.00 0.00 0.00 3.01
1073 1868 2.179427 TGAGAAATCGGAGGCAAGAGA 58.821 47.619 0.00 0.00 0.00 3.10
1076 1875 4.405680 TGAGAAATCGGAGGCAAGAGATAA 59.594 41.667 0.00 0.00 0.00 1.75
1144 1943 2.101185 CGCGTGCTCATCGTCTCT 59.899 61.111 0.00 0.00 0.00 3.10
1180 1979 4.259690 CGAAAGAACAAGTTCGTCGACTTT 60.260 41.667 24.72 12.88 45.80 2.66
1205 2004 5.860716 GTCGGTAAGTATTTCGTCTTGACTT 59.139 40.000 0.00 0.00 34.78 3.01
1210 2018 4.324267 AGTATTTCGTCTTGACTTTGGGG 58.676 43.478 0.00 0.00 0.00 4.96
1227 2036 4.616671 TGGGGAAATAATGGTGGATTCA 57.383 40.909 0.00 0.00 0.00 2.57
1644 2477 1.025113 TCTACCAGGACGTCGAGCAG 61.025 60.000 9.92 3.15 0.00 4.24
1689 2525 1.743772 GCCGTCTGCCACATGAACTAT 60.744 52.381 0.00 0.00 0.00 2.12
1899 2735 3.880846 GACCCCGACGCGTACGAT 61.881 66.667 25.30 5.69 43.93 3.73
2004 2840 3.918253 CTGCGCCAAGGCCTACCAA 62.918 63.158 5.16 0.00 39.06 3.67
2041 2877 2.594303 CGGCACACCAGGCAAAGA 60.594 61.111 0.00 0.00 34.57 2.52
2249 3091 1.343465 GGAGTTCCTGGAGTCGAACAA 59.657 52.381 10.72 0.00 40.69 2.83
2508 4755 2.223456 CGAGTGATCTACCTGTGCTCTG 60.223 54.545 0.00 0.00 0.00 3.35
2612 4876 4.323417 ACCGTGATGTTGATGTTACACAT 58.677 39.130 0.00 0.00 42.43 3.21
2615 4879 5.106752 CCGTGATGTTGATGTTACACATTCA 60.107 40.000 0.00 0.00 39.27 2.57
2629 4896 8.952278 TGTTACACATTCAAGAAGTGTTAGTTT 58.048 29.630 17.00 2.28 43.40 2.66
2655 4922 4.056092 TGTTTGTGTGTCCATACGTACA 57.944 40.909 0.00 0.00 0.00 2.90
2657 4924 5.057819 TGTTTGTGTGTCCATACGTACAAT 58.942 37.500 0.00 0.00 35.40 2.71
2659 4926 6.145858 TGTTTGTGTGTCCATACGTACAATAC 59.854 38.462 0.00 0.00 35.40 1.89
2660 4927 5.388408 TGTGTGTCCATACGTACAATACA 57.612 39.130 0.00 0.65 0.00 2.29
2662 4929 6.399743 TGTGTGTCCATACGTACAATACAAT 58.600 36.000 0.00 0.00 0.00 2.71
2663 4930 6.311690 TGTGTGTCCATACGTACAATACAATG 59.688 38.462 0.00 0.00 0.00 2.82
2664 4931 5.292345 TGTGTCCATACGTACAATACAATGC 59.708 40.000 0.00 0.00 0.00 3.56
2665 4932 5.292345 GTGTCCATACGTACAATACAATGCA 59.708 40.000 0.00 0.00 0.00 3.96
2666 4933 6.018262 GTGTCCATACGTACAATACAATGCAT 60.018 38.462 0.00 0.00 0.00 3.96
2667 4934 6.540551 TGTCCATACGTACAATACAATGCATT 59.459 34.615 5.99 5.99 0.00 3.56
2668 4935 7.066404 TGTCCATACGTACAATACAATGCATTT 59.934 33.333 9.83 4.36 0.00 2.32
2670 4937 8.462811 TCCATACGTACAATACAATGCATTTTT 58.537 29.630 9.83 2.14 0.00 1.94
2695 4962 1.148310 TGACTTTGTAAGCTCGCTGC 58.852 50.000 0.00 0.00 43.29 5.25
2700 4967 0.874390 TTGTAAGCTCGCTGCCTTTG 59.126 50.000 0.00 0.00 44.23 2.77
2703 4970 0.611200 TAAGCTCGCTGCCTTTGGTA 59.389 50.000 0.00 0.00 44.23 3.25
2715 4982 3.702548 TGCCTTTGGTAAGCTCTATCGTA 59.297 43.478 0.00 0.00 0.00 3.43
2730 4997 6.296365 TCTATCGTAACCTCGTAATCACAG 57.704 41.667 0.00 0.00 0.00 3.66
2737 5004 4.189639 ACCTCGTAATCACAGGAAAGAC 57.810 45.455 0.00 0.00 31.31 3.01
2748 5015 2.223971 ACAGGAAAGACGAAGCGAGAAA 60.224 45.455 0.00 0.00 0.00 2.52
2749 5016 2.155924 CAGGAAAGACGAAGCGAGAAAC 59.844 50.000 0.00 0.00 0.00 2.78
2750 5017 2.036089 AGGAAAGACGAAGCGAGAAACT 59.964 45.455 0.00 0.00 0.00 2.66
2856 5123 8.792633 TCAAATTAACCAGTACAAATGGAAGAG 58.207 33.333 6.63 0.00 40.51 2.85
2925 5193 4.782019 TTTGGCATCCAGTAACATTCAC 57.218 40.909 0.00 0.00 33.81 3.18
2958 5227 4.050553 CAACATTTTTGTCATGCTCCGTT 58.949 39.130 0.00 0.00 0.00 4.44
2961 5230 4.037923 ACATTTTTGTCATGCTCCGTTCTT 59.962 37.500 0.00 0.00 0.00 2.52
2968 5240 1.732259 CATGCTCCGTTCTTACACCAC 59.268 52.381 0.00 0.00 0.00 4.16
2999 5271 8.647143 ACATTCAGTTGGATAAAACAAAACTG 57.353 30.769 7.38 7.38 45.77 3.16
3000 5272 7.224557 ACATTCAGTTGGATAAAACAAAACTGC 59.775 33.333 8.59 0.00 44.65 4.40
3004 5276 3.582164 TGGATAAAACAAAACTGCCCCT 58.418 40.909 0.00 0.00 0.00 4.79
3005 5277 3.576550 TGGATAAAACAAAACTGCCCCTC 59.423 43.478 0.00 0.00 0.00 4.30
3050 5323 4.158025 CCAGAAAAGGAGTAGTAGCGAAGA 59.842 45.833 0.00 0.00 0.00 2.87
3051 5324 5.336744 CAGAAAAGGAGTAGTAGCGAAGAG 58.663 45.833 0.00 0.00 0.00 2.85
3052 5325 5.011586 AGAAAAGGAGTAGTAGCGAAGAGT 58.988 41.667 0.00 0.00 0.00 3.24
3054 5327 6.658391 AGAAAAGGAGTAGTAGCGAAGAGTTA 59.342 38.462 0.00 0.00 0.00 2.24
3055 5328 7.339976 AGAAAAGGAGTAGTAGCGAAGAGTTAT 59.660 37.037 0.00 0.00 0.00 1.89
3056 5329 6.380095 AAGGAGTAGTAGCGAAGAGTTATG 57.620 41.667 0.00 0.00 0.00 1.90
3066 5339 3.198068 CGAAGAGTTATGGGTCACATGG 58.802 50.000 0.00 0.00 40.82 3.66
3083 5356 2.203480 GGAAGTGCCCAAGCCACA 60.203 61.111 0.00 0.00 38.69 4.17
3116 5389 1.451747 ACGGACGGTCTAGGAGCTC 60.452 63.158 4.71 4.71 0.00 4.09
3122 5395 1.342076 ACGGTCTAGGAGCTCCATTCA 60.342 52.381 33.90 14.92 38.89 2.57
3132 5405 1.145738 AGCTCCATTCAAGGTGGTTGT 59.854 47.619 0.00 0.00 37.96 3.32
3138 5411 3.243501 CCATTCAAGGTGGTTGTCAACTG 60.244 47.826 15.17 5.71 43.89 3.16
3139 5412 2.799126 TCAAGGTGGTTGTCAACTGT 57.201 45.000 15.17 0.00 43.89 3.55
3140 5413 2.639065 TCAAGGTGGTTGTCAACTGTC 58.361 47.619 15.17 6.29 43.89 3.51
3141 5414 2.026729 TCAAGGTGGTTGTCAACTGTCA 60.027 45.455 15.17 2.61 43.89 3.58
3142 5415 2.951642 CAAGGTGGTTGTCAACTGTCAT 59.048 45.455 15.17 1.97 43.89 3.06
3143 5416 3.297134 AGGTGGTTGTCAACTGTCATT 57.703 42.857 15.17 0.00 42.85 2.57
3144 5417 4.431416 AGGTGGTTGTCAACTGTCATTA 57.569 40.909 15.17 0.00 42.85 1.90
3145 5418 4.985538 AGGTGGTTGTCAACTGTCATTAT 58.014 39.130 15.17 0.00 42.85 1.28
3146 5419 4.761739 AGGTGGTTGTCAACTGTCATTATG 59.238 41.667 15.17 0.00 42.85 1.90
3147 5420 4.082787 GGTGGTTGTCAACTGTCATTATGG 60.083 45.833 15.17 0.00 0.00 2.74
3148 5421 4.518970 GTGGTTGTCAACTGTCATTATGGT 59.481 41.667 15.17 0.00 0.00 3.55
3149 5422 4.518590 TGGTTGTCAACTGTCATTATGGTG 59.481 41.667 15.17 0.00 0.00 4.17
3150 5423 4.518970 GGTTGTCAACTGTCATTATGGTGT 59.481 41.667 15.17 0.00 0.00 4.16
3151 5424 5.009610 GGTTGTCAACTGTCATTATGGTGTT 59.990 40.000 15.17 0.00 0.00 3.32
3152 5425 5.687770 TGTCAACTGTCATTATGGTGTTG 57.312 39.130 14.45 14.45 36.93 3.33
3153 5426 4.023279 TGTCAACTGTCATTATGGTGTTGC 60.023 41.667 15.22 12.38 35.96 4.17
3154 5427 4.216257 GTCAACTGTCATTATGGTGTTGCT 59.784 41.667 15.22 0.00 35.96 3.91
3155 5428 5.411361 GTCAACTGTCATTATGGTGTTGCTA 59.589 40.000 15.22 3.78 35.96 3.49
3156 5429 6.094048 GTCAACTGTCATTATGGTGTTGCTAT 59.906 38.462 15.22 0.00 35.96 2.97
3157 5430 6.658816 TCAACTGTCATTATGGTGTTGCTATT 59.341 34.615 15.22 0.00 35.96 1.73
3158 5431 6.441093 ACTGTCATTATGGTGTTGCTATTG 57.559 37.500 0.00 0.00 0.00 1.90
3159 5432 6.179756 ACTGTCATTATGGTGTTGCTATTGA 58.820 36.000 0.00 0.00 0.00 2.57
3160 5433 6.658816 ACTGTCATTATGGTGTTGCTATTGAA 59.341 34.615 0.00 0.00 0.00 2.69
3161 5434 7.087409 TGTCATTATGGTGTTGCTATTGAAG 57.913 36.000 0.00 0.00 0.00 3.02
3162 5435 6.883756 TGTCATTATGGTGTTGCTATTGAAGA 59.116 34.615 0.00 0.00 0.00 2.87
3163 5436 7.392953 TGTCATTATGGTGTTGCTATTGAAGAA 59.607 33.333 0.00 0.00 0.00 2.52
3164 5437 8.408601 GTCATTATGGTGTTGCTATTGAAGAAT 58.591 33.333 0.00 0.00 0.00 2.40
3165 5438 8.623903 TCATTATGGTGTTGCTATTGAAGAATC 58.376 33.333 0.00 0.00 0.00 2.52
3166 5439 8.627403 CATTATGGTGTTGCTATTGAAGAATCT 58.373 33.333 0.00 0.00 0.00 2.40
3167 5440 6.690194 ATGGTGTTGCTATTGAAGAATCTC 57.310 37.500 0.00 0.00 0.00 2.75
3168 5441 5.559770 TGGTGTTGCTATTGAAGAATCTCA 58.440 37.500 0.00 0.00 0.00 3.27
3169 5442 5.412594 TGGTGTTGCTATTGAAGAATCTCAC 59.587 40.000 0.00 0.00 0.00 3.51
3170 5443 5.645497 GGTGTTGCTATTGAAGAATCTCACT 59.355 40.000 0.00 0.00 0.00 3.41
3171 5444 6.150140 GGTGTTGCTATTGAAGAATCTCACTT 59.850 38.462 0.00 0.00 0.00 3.16
3172 5445 7.308830 GGTGTTGCTATTGAAGAATCTCACTTT 60.309 37.037 0.00 0.00 0.00 2.66
3173 5446 7.748241 GTGTTGCTATTGAAGAATCTCACTTTC 59.252 37.037 0.00 0.00 0.00 2.62
3174 5447 7.445096 TGTTGCTATTGAAGAATCTCACTTTCA 59.555 33.333 0.00 0.00 0.00 2.69
3175 5448 8.457261 GTTGCTATTGAAGAATCTCACTTTCAT 58.543 33.333 0.00 0.00 0.00 2.57
3176 5449 8.571461 TGCTATTGAAGAATCTCACTTTCATT 57.429 30.769 0.00 0.00 0.00 2.57
3177 5450 9.671279 TGCTATTGAAGAATCTCACTTTCATTA 57.329 29.630 0.00 0.00 0.00 1.90
3181 5454 8.868522 TTGAAGAATCTCACTTTCATTATGGT 57.131 30.769 0.00 0.00 0.00 3.55
3182 5455 8.272545 TGAAGAATCTCACTTTCATTATGGTG 57.727 34.615 0.00 0.00 0.00 4.17
3183 5456 7.884877 TGAAGAATCTCACTTTCATTATGGTGT 59.115 33.333 0.00 0.00 0.00 4.16
3184 5457 7.856145 AGAATCTCACTTTCATTATGGTGTC 57.144 36.000 0.00 0.00 0.00 3.67
3185 5458 7.397221 AGAATCTCACTTTCATTATGGTGTCA 58.603 34.615 0.00 0.00 0.00 3.58
3186 5459 8.051535 AGAATCTCACTTTCATTATGGTGTCAT 58.948 33.333 0.00 0.00 37.40 3.06
3187 5460 6.990341 TCTCACTTTCATTATGGTGTCATG 57.010 37.500 0.00 0.00 34.96 3.07
3188 5461 6.710278 TCTCACTTTCATTATGGTGTCATGA 58.290 36.000 0.00 0.00 34.96 3.07
3189 5462 6.820152 TCTCACTTTCATTATGGTGTCATGAG 59.180 38.462 0.00 0.00 34.96 2.90
3190 5463 6.710278 TCACTTTCATTATGGTGTCATGAGA 58.290 36.000 0.00 0.00 34.96 3.27
3191 5464 7.341030 TCACTTTCATTATGGTGTCATGAGAT 58.659 34.615 0.00 0.00 34.96 2.75
3192 5465 7.281549 TCACTTTCATTATGGTGTCATGAGATG 59.718 37.037 0.00 0.00 34.96 2.90
3193 5466 6.544931 ACTTTCATTATGGTGTCATGAGATGG 59.455 38.462 0.00 0.00 34.96 3.51
3194 5467 5.635278 TCATTATGGTGTCATGAGATGGT 57.365 39.130 0.00 0.00 34.96 3.55
3195 5468 6.005066 TCATTATGGTGTCATGAGATGGTT 57.995 37.500 0.00 0.00 34.96 3.67
3196 5469 5.824097 TCATTATGGTGTCATGAGATGGTTG 59.176 40.000 0.00 0.00 34.96 3.77
3197 5470 2.495155 TGGTGTCATGAGATGGTTGG 57.505 50.000 0.00 0.00 0.00 3.77
3198 5471 1.704628 TGGTGTCATGAGATGGTTGGT 59.295 47.619 0.00 0.00 0.00 3.67
3199 5472 2.086869 GGTGTCATGAGATGGTTGGTG 58.913 52.381 0.00 0.00 0.00 4.17
3200 5473 1.470098 GTGTCATGAGATGGTTGGTGC 59.530 52.381 0.00 0.00 0.00 5.01
3201 5474 0.729116 GTCATGAGATGGTTGGTGCG 59.271 55.000 0.00 0.00 0.00 5.34
3202 5475 0.392863 TCATGAGATGGTTGGTGCGG 60.393 55.000 0.00 0.00 0.00 5.69
3203 5476 0.392863 CATGAGATGGTTGGTGCGGA 60.393 55.000 0.00 0.00 0.00 5.54
3204 5477 0.548031 ATGAGATGGTTGGTGCGGAT 59.452 50.000 0.00 0.00 0.00 4.18
3205 5478 0.392863 TGAGATGGTTGGTGCGGATG 60.393 55.000 0.00 0.00 0.00 3.51
3206 5479 1.718757 GAGATGGTTGGTGCGGATGC 61.719 60.000 0.00 0.00 43.20 3.91
3216 5489 2.642700 GCGGATGCGGTTGTTGTT 59.357 55.556 9.20 0.00 0.00 2.83
3217 5490 1.870383 GCGGATGCGGTTGTTGTTA 59.130 52.632 9.20 0.00 0.00 2.41
3218 5491 0.450184 GCGGATGCGGTTGTTGTTAT 59.550 50.000 9.20 0.00 0.00 1.89
3219 5492 1.666700 GCGGATGCGGTTGTTGTTATA 59.333 47.619 9.20 0.00 0.00 0.98
3220 5493 2.289547 GCGGATGCGGTTGTTGTTATAT 59.710 45.455 9.20 0.00 0.00 0.86
3221 5494 3.242936 GCGGATGCGGTTGTTGTTATATT 60.243 43.478 9.20 0.00 0.00 1.28
3222 5495 4.732355 GCGGATGCGGTTGTTGTTATATTT 60.732 41.667 9.20 0.00 0.00 1.40
3223 5496 5.336744 CGGATGCGGTTGTTGTTATATTTT 58.663 37.500 0.00 0.00 0.00 1.82
3224 5497 5.229052 CGGATGCGGTTGTTGTTATATTTTG 59.771 40.000 0.00 0.00 0.00 2.44
3225 5498 6.096695 GGATGCGGTTGTTGTTATATTTTGT 58.903 36.000 0.00 0.00 0.00 2.83
3226 5499 6.252655 GGATGCGGTTGTTGTTATATTTTGTC 59.747 38.462 0.00 0.00 0.00 3.18
3227 5500 5.147865 TGCGGTTGTTGTTATATTTTGTCG 58.852 37.500 0.00 0.00 0.00 4.35
3228 5501 5.049612 TGCGGTTGTTGTTATATTTTGTCGA 60.050 36.000 0.00 0.00 0.00 4.20
3229 5502 6.025280 GCGGTTGTTGTTATATTTTGTCGAT 58.975 36.000 0.00 0.00 0.00 3.59
3230 5503 6.193959 GCGGTTGTTGTTATATTTTGTCGATC 59.806 38.462 0.00 0.00 0.00 3.69
3231 5504 6.406896 CGGTTGTTGTTATATTTTGTCGATCG 59.593 38.462 9.36 9.36 0.00 3.69
3232 5505 6.193959 GGTTGTTGTTATATTTTGTCGATCGC 59.806 38.462 11.09 6.41 0.00 4.58
3233 5506 6.410243 TGTTGTTATATTTTGTCGATCGCA 57.590 33.333 11.09 9.23 0.00 5.10
3234 5507 6.474364 TGTTGTTATATTTTGTCGATCGCAG 58.526 36.000 11.09 0.00 0.00 5.18
3235 5508 6.311690 TGTTGTTATATTTTGTCGATCGCAGA 59.688 34.615 11.09 4.47 45.75 4.26
3236 5509 7.011016 TGTTGTTATATTTTGTCGATCGCAGAT 59.989 33.333 11.09 11.56 45.12 2.90
3237 5510 7.477144 TGTTATATTTTGTCGATCGCAGATT 57.523 32.000 11.09 6.49 45.12 2.40
3238 5511 7.915508 TGTTATATTTTGTCGATCGCAGATTT 58.084 30.769 11.09 7.80 45.12 2.17
3239 5512 7.850492 TGTTATATTTTGTCGATCGCAGATTTG 59.150 33.333 11.09 0.00 45.12 2.32
3240 5513 4.685169 ATTTTGTCGATCGCAGATTTGT 57.315 36.364 11.09 0.00 45.12 2.83
3241 5514 4.481930 TTTTGTCGATCGCAGATTTGTT 57.518 36.364 11.09 0.00 45.12 2.83
3242 5515 4.481930 TTTGTCGATCGCAGATTTGTTT 57.518 36.364 11.09 0.00 45.12 2.83
3243 5516 3.454042 TGTCGATCGCAGATTTGTTTG 57.546 42.857 11.09 0.00 45.12 2.93
3244 5517 3.063485 TGTCGATCGCAGATTTGTTTGA 58.937 40.909 11.09 0.00 45.12 2.69
3245 5518 3.684305 TGTCGATCGCAGATTTGTTTGAT 59.316 39.130 11.09 0.00 45.12 2.57
3246 5519 4.154015 TGTCGATCGCAGATTTGTTTGATT 59.846 37.500 11.09 0.00 45.12 2.57
3247 5520 5.088739 GTCGATCGCAGATTTGTTTGATTT 58.911 37.500 11.09 0.00 45.12 2.17
3248 5521 5.002840 GTCGATCGCAGATTTGTTTGATTTG 59.997 40.000 11.09 0.00 45.12 2.32
3249 5522 5.088068 CGATCGCAGATTTGTTTGATTTGA 58.912 37.500 0.26 0.00 45.12 2.69
3250 5523 5.740569 CGATCGCAGATTTGTTTGATTTGAT 59.259 36.000 0.26 0.00 45.12 2.57
3251 5524 6.252015 CGATCGCAGATTTGTTTGATTTGATT 59.748 34.615 0.26 0.00 45.12 2.57
3252 5525 7.201376 CGATCGCAGATTTGTTTGATTTGATTT 60.201 33.333 0.26 0.00 45.12 2.17
3253 5526 7.712264 TCGCAGATTTGTTTGATTTGATTTT 57.288 28.000 0.00 0.00 0.00 1.82
3254 5527 8.140677 TCGCAGATTTGTTTGATTTGATTTTT 57.859 26.923 0.00 0.00 0.00 1.94
3275 5548 4.957759 TTTTTCCTCGTTTAGGCATAGC 57.042 40.909 0.00 0.00 46.10 2.97
3276 5549 3.906720 TTTCCTCGTTTAGGCATAGCT 57.093 42.857 0.00 0.00 46.10 3.32
3277 5550 3.906720 TTCCTCGTTTAGGCATAGCTT 57.093 42.857 0.00 0.00 46.10 3.74
3278 5551 3.906720 TCCTCGTTTAGGCATAGCTTT 57.093 42.857 0.00 0.00 46.10 3.51
3279 5552 3.531538 TCCTCGTTTAGGCATAGCTTTG 58.468 45.455 0.00 0.00 46.10 2.77
3280 5553 2.614057 CCTCGTTTAGGCATAGCTTTGG 59.386 50.000 6.29 0.00 38.97 3.28
3281 5554 3.270877 CTCGTTTAGGCATAGCTTTGGT 58.729 45.455 6.29 0.00 0.00 3.67
3282 5555 3.267483 TCGTTTAGGCATAGCTTTGGTC 58.733 45.455 6.29 0.00 0.00 4.02
3283 5556 3.055385 TCGTTTAGGCATAGCTTTGGTCT 60.055 43.478 6.29 0.00 0.00 3.85
3284 5557 3.689649 CGTTTAGGCATAGCTTTGGTCTT 59.310 43.478 6.29 0.00 0.00 3.01
3285 5558 4.873827 CGTTTAGGCATAGCTTTGGTCTTA 59.126 41.667 6.29 0.00 0.00 2.10
3286 5559 5.527582 CGTTTAGGCATAGCTTTGGTCTTAT 59.472 40.000 6.29 0.00 0.00 1.73
3287 5560 6.704493 CGTTTAGGCATAGCTTTGGTCTTATA 59.296 38.462 6.29 0.00 0.00 0.98
3288 5561 7.387948 CGTTTAGGCATAGCTTTGGTCTTATAT 59.612 37.037 6.29 0.00 0.00 0.86
3289 5562 8.507249 GTTTAGGCATAGCTTTGGTCTTATATG 58.493 37.037 6.29 0.00 0.00 1.78
3290 5563 6.439636 AGGCATAGCTTTGGTCTTATATGA 57.560 37.500 6.29 0.00 0.00 2.15
3291 5564 7.025520 AGGCATAGCTTTGGTCTTATATGAT 57.974 36.000 6.29 0.00 0.00 2.45
3292 5565 7.465116 AGGCATAGCTTTGGTCTTATATGATT 58.535 34.615 6.29 0.00 0.00 2.57
3293 5566 8.605947 AGGCATAGCTTTGGTCTTATATGATTA 58.394 33.333 6.29 0.00 0.00 1.75
3294 5567 9.401058 GGCATAGCTTTGGTCTTATATGATTAT 57.599 33.333 6.29 0.00 0.00 1.28
3304 5577 9.177608 TGGTCTTATATGATTATGCTATTTGCC 57.822 33.333 0.00 0.00 42.00 4.52
3305 5578 9.177608 GGTCTTATATGATTATGCTATTTGCCA 57.822 33.333 0.00 0.00 42.00 4.92
3307 5580 8.896744 TCTTATATGATTATGCTATTTGCCAGC 58.103 33.333 0.00 0.00 42.00 4.85
3312 5585 3.362040 TGCTATTTGCCAGCAGGTT 57.638 47.368 0.00 0.00 43.90 3.50
3313 5586 1.631405 TGCTATTTGCCAGCAGGTTT 58.369 45.000 0.00 0.00 43.90 3.27
3314 5587 1.969923 TGCTATTTGCCAGCAGGTTTT 59.030 42.857 0.00 0.00 43.90 2.43
3315 5588 2.368221 TGCTATTTGCCAGCAGGTTTTT 59.632 40.909 0.00 0.00 43.90 1.94
3316 5589 2.995939 GCTATTTGCCAGCAGGTTTTTC 59.004 45.455 0.00 0.00 38.93 2.29
3317 5590 3.306294 GCTATTTGCCAGCAGGTTTTTCT 60.306 43.478 0.00 0.00 38.93 2.52
3318 5591 2.600470 TTTGCCAGCAGGTTTTTCTG 57.400 45.000 0.00 0.00 37.19 3.02
3319 5592 1.484038 TTGCCAGCAGGTTTTTCTGT 58.516 45.000 0.00 0.00 37.12 3.41
3320 5593 2.356665 TGCCAGCAGGTTTTTCTGTA 57.643 45.000 0.00 0.00 37.12 2.74
3321 5594 2.875296 TGCCAGCAGGTTTTTCTGTAT 58.125 42.857 0.00 0.00 37.12 2.29
3322 5595 2.557924 TGCCAGCAGGTTTTTCTGTATG 59.442 45.455 0.00 0.00 37.12 2.39
3323 5596 2.558359 GCCAGCAGGTTTTTCTGTATGT 59.442 45.455 0.00 0.00 37.12 2.29
3324 5597 3.612479 GCCAGCAGGTTTTTCTGTATGTG 60.612 47.826 0.00 0.00 37.12 3.21
3325 5598 3.569701 CCAGCAGGTTTTTCTGTATGTGT 59.430 43.478 0.00 0.00 37.12 3.72
3326 5599 4.037923 CCAGCAGGTTTTTCTGTATGTGTT 59.962 41.667 0.00 0.00 37.12 3.32
3327 5600 4.977963 CAGCAGGTTTTTCTGTATGTGTTG 59.022 41.667 0.00 0.00 37.12 3.33
3328 5601 4.037923 AGCAGGTTTTTCTGTATGTGTTGG 59.962 41.667 0.00 0.00 37.12 3.77
3329 5602 4.202111 GCAGGTTTTTCTGTATGTGTTGGT 60.202 41.667 0.00 0.00 37.12 3.67
3330 5603 5.280945 CAGGTTTTTCTGTATGTGTTGGTG 58.719 41.667 0.00 0.00 0.00 4.17
3331 5604 4.953579 AGGTTTTTCTGTATGTGTTGGTGT 59.046 37.500 0.00 0.00 0.00 4.16
3332 5605 5.420739 AGGTTTTTCTGTATGTGTTGGTGTT 59.579 36.000 0.00 0.00 0.00 3.32
3333 5606 5.518487 GGTTTTTCTGTATGTGTTGGTGTTG 59.482 40.000 0.00 0.00 0.00 3.33
3334 5607 6.326375 GTTTTTCTGTATGTGTTGGTGTTGA 58.674 36.000 0.00 0.00 0.00 3.18
3335 5608 6.707440 TTTTCTGTATGTGTTGGTGTTGAT 57.293 33.333 0.00 0.00 0.00 2.57
3336 5609 6.707440 TTTCTGTATGTGTTGGTGTTGATT 57.293 33.333 0.00 0.00 0.00 2.57
3337 5610 5.687770 TCTGTATGTGTTGGTGTTGATTG 57.312 39.130 0.00 0.00 0.00 2.67
3338 5611 5.129634 TCTGTATGTGTTGGTGTTGATTGT 58.870 37.500 0.00 0.00 0.00 2.71
3339 5612 5.008514 TCTGTATGTGTTGGTGTTGATTGTG 59.991 40.000 0.00 0.00 0.00 3.33
3340 5613 4.642437 TGTATGTGTTGGTGTTGATTGTGT 59.358 37.500 0.00 0.00 0.00 3.72
3341 5614 3.500558 TGTGTTGGTGTTGATTGTGTG 57.499 42.857 0.00 0.00 0.00 3.82
3342 5615 2.192624 GTGTTGGTGTTGATTGTGTGC 58.807 47.619 0.00 0.00 0.00 4.57
3343 5616 1.821136 TGTTGGTGTTGATTGTGTGCA 59.179 42.857 0.00 0.00 0.00 4.57
3344 5617 2.429971 TGTTGGTGTTGATTGTGTGCAT 59.570 40.909 0.00 0.00 0.00 3.96
3345 5618 3.052036 GTTGGTGTTGATTGTGTGCATC 58.948 45.455 0.00 0.00 0.00 3.91
3346 5619 2.585330 TGGTGTTGATTGTGTGCATCT 58.415 42.857 0.00 0.00 0.00 2.90
3347 5620 2.957680 TGGTGTTGATTGTGTGCATCTT 59.042 40.909 0.00 0.00 0.00 2.40
3348 5621 4.140536 TGGTGTTGATTGTGTGCATCTTA 58.859 39.130 0.00 0.00 0.00 2.10
3349 5622 4.582240 TGGTGTTGATTGTGTGCATCTTAA 59.418 37.500 0.00 0.00 0.00 1.85
3350 5623 4.917415 GGTGTTGATTGTGTGCATCTTAAC 59.083 41.667 0.00 0.00 0.00 2.01
3351 5624 5.278463 GGTGTTGATTGTGTGCATCTTAACT 60.278 40.000 0.00 0.00 0.00 2.24
3352 5625 5.626543 GTGTTGATTGTGTGCATCTTAACTG 59.373 40.000 0.00 0.00 0.00 3.16
3353 5626 5.299028 TGTTGATTGTGTGCATCTTAACTGT 59.701 36.000 0.00 0.00 0.00 3.55
3354 5627 5.361135 TGATTGTGTGCATCTTAACTGTG 57.639 39.130 0.00 0.00 0.00 3.66
3355 5628 4.821260 TGATTGTGTGCATCTTAACTGTGT 59.179 37.500 0.00 0.00 0.00 3.72
3356 5629 5.994668 TGATTGTGTGCATCTTAACTGTGTA 59.005 36.000 0.00 0.00 0.00 2.90
3357 5630 5.922739 TTGTGTGCATCTTAACTGTGTAG 57.077 39.130 0.00 0.00 0.00 2.74
3358 5631 5.208463 TGTGTGCATCTTAACTGTGTAGA 57.792 39.130 0.00 0.00 0.00 2.59
3359 5632 5.230182 TGTGTGCATCTTAACTGTGTAGAG 58.770 41.667 0.00 0.00 0.00 2.43
3360 5633 4.627467 GTGTGCATCTTAACTGTGTAGAGG 59.373 45.833 0.00 1.22 0.00 3.69
3361 5634 3.619038 GTGCATCTTAACTGTGTAGAGGC 59.381 47.826 17.02 17.02 43.73 4.70
3362 5635 3.198872 GCATCTTAACTGTGTAGAGGCC 58.801 50.000 14.41 0.00 39.16 5.19
3363 5636 3.448686 CATCTTAACTGTGTAGAGGCCG 58.551 50.000 0.00 0.00 0.00 6.13
3364 5637 1.822990 TCTTAACTGTGTAGAGGCCGG 59.177 52.381 0.00 0.00 0.00 6.13
3365 5638 0.899720 TTAACTGTGTAGAGGCCGGG 59.100 55.000 2.18 0.00 0.00 5.73
3366 5639 0.251922 TAACTGTGTAGAGGCCGGGT 60.252 55.000 2.18 0.00 0.00 5.28
3367 5640 1.827399 AACTGTGTAGAGGCCGGGTG 61.827 60.000 2.18 0.00 0.00 4.61
3368 5641 2.203728 TGTGTAGAGGCCGGGTGT 60.204 61.111 2.18 0.00 0.00 4.16
3369 5642 2.264794 GTGTAGAGGCCGGGTGTG 59.735 66.667 2.18 0.00 0.00 3.82
3370 5643 2.203728 TGTAGAGGCCGGGTGTGT 60.204 61.111 2.18 0.00 0.00 3.72
3371 5644 2.264794 GTAGAGGCCGGGTGTGTG 59.735 66.667 2.18 0.00 0.00 3.82
3372 5645 3.702048 TAGAGGCCGGGTGTGTGC 61.702 66.667 2.18 0.00 0.00 4.57
3374 5647 4.643387 GAGGCCGGGTGTGTGCTT 62.643 66.667 2.18 0.00 0.00 3.91
3375 5648 3.246112 AGGCCGGGTGTGTGCTTA 61.246 61.111 2.18 0.00 0.00 3.09
3376 5649 2.746277 GGCCGGGTGTGTGCTTAG 60.746 66.667 2.18 0.00 0.00 2.18
3377 5650 2.032071 GCCGGGTGTGTGCTTAGT 59.968 61.111 2.18 0.00 0.00 2.24
3378 5651 2.325082 GCCGGGTGTGTGCTTAGTG 61.325 63.158 2.18 0.00 0.00 2.74
3379 5652 1.070786 CCGGGTGTGTGCTTAGTGT 59.929 57.895 0.00 0.00 0.00 3.55
3380 5653 1.227999 CCGGGTGTGTGCTTAGTGTG 61.228 60.000 0.00 0.00 0.00 3.82
3381 5654 0.531974 CGGGTGTGTGCTTAGTGTGT 60.532 55.000 0.00 0.00 0.00 3.72
3382 5655 1.675552 GGGTGTGTGCTTAGTGTGTT 58.324 50.000 0.00 0.00 0.00 3.32
3383 5656 2.021457 GGGTGTGTGCTTAGTGTGTTT 58.979 47.619 0.00 0.00 0.00 2.83
3384 5657 2.223479 GGGTGTGTGCTTAGTGTGTTTG 60.223 50.000 0.00 0.00 0.00 2.93
3385 5658 2.422127 GGTGTGTGCTTAGTGTGTTTGT 59.578 45.455 0.00 0.00 0.00 2.83
3386 5659 3.623960 GGTGTGTGCTTAGTGTGTTTGTA 59.376 43.478 0.00 0.00 0.00 2.41
3387 5660 4.274950 GGTGTGTGCTTAGTGTGTTTGTAT 59.725 41.667 0.00 0.00 0.00 2.29
3388 5661 5.440685 GTGTGTGCTTAGTGTGTTTGTATC 58.559 41.667 0.00 0.00 0.00 2.24
3389 5662 5.236478 GTGTGTGCTTAGTGTGTTTGTATCT 59.764 40.000 0.00 0.00 0.00 1.98
3390 5663 6.422701 GTGTGTGCTTAGTGTGTTTGTATCTA 59.577 38.462 0.00 0.00 0.00 1.98
3391 5664 6.422701 TGTGTGCTTAGTGTGTTTGTATCTAC 59.577 38.462 0.00 0.00 0.00 2.59
3392 5665 6.645415 GTGTGCTTAGTGTGTTTGTATCTACT 59.355 38.462 0.00 0.00 0.00 2.57
3393 5666 7.170998 GTGTGCTTAGTGTGTTTGTATCTACTT 59.829 37.037 0.00 0.00 0.00 2.24
3394 5667 7.170828 TGTGCTTAGTGTGTTTGTATCTACTTG 59.829 37.037 0.00 0.00 0.00 3.16
3395 5668 7.384115 GTGCTTAGTGTGTTTGTATCTACTTGA 59.616 37.037 0.00 0.00 0.00 3.02
3396 5669 7.929245 TGCTTAGTGTGTTTGTATCTACTTGAA 59.071 33.333 0.00 0.00 0.00 2.69
3397 5670 8.436200 GCTTAGTGTGTTTGTATCTACTTGAAG 58.564 37.037 0.00 0.00 0.00 3.02
3398 5671 6.787085 AGTGTGTTTGTATCTACTTGAAGC 57.213 37.500 0.00 0.00 0.00 3.86
3399 5672 6.525629 AGTGTGTTTGTATCTACTTGAAGCT 58.474 36.000 0.00 0.00 0.00 3.74
3400 5673 6.992715 AGTGTGTTTGTATCTACTTGAAGCTT 59.007 34.615 0.00 0.00 0.00 3.74
3401 5674 7.171678 AGTGTGTTTGTATCTACTTGAAGCTTC 59.828 37.037 19.89 19.89 0.00 3.86
3402 5675 6.989759 TGTGTTTGTATCTACTTGAAGCTTCA 59.010 34.615 25.16 25.16 34.92 3.02
3403 5676 7.661437 TGTGTTTGTATCTACTTGAAGCTTCAT 59.339 33.333 28.89 17.87 37.00 2.57
3404 5677 8.507249 GTGTTTGTATCTACTTGAAGCTTCATT 58.493 33.333 28.89 20.49 37.00 2.57
3405 5678 9.066892 TGTTTGTATCTACTTGAAGCTTCATTT 57.933 29.630 28.89 20.15 37.00 2.32
3406 5679 9.899226 GTTTGTATCTACTTGAAGCTTCATTTT 57.101 29.630 28.89 17.82 37.00 1.82
3408 5681 8.846943 TGTATCTACTTGAAGCTTCATTTTCA 57.153 30.769 28.89 13.35 37.00 2.69
3409 5682 8.939929 TGTATCTACTTGAAGCTTCATTTTCAG 58.060 33.333 28.89 23.34 37.00 3.02
3410 5683 7.992754 ATCTACTTGAAGCTTCATTTTCAGT 57.007 32.000 28.89 27.12 37.00 3.41
3411 5684 7.426929 TCTACTTGAAGCTTCATTTTCAGTC 57.573 36.000 28.89 0.00 37.00 3.51
3412 5685 6.992123 TCTACTTGAAGCTTCATTTTCAGTCA 59.008 34.615 28.89 15.36 37.00 3.41
3413 5686 6.455360 ACTTGAAGCTTCATTTTCAGTCAA 57.545 33.333 28.89 9.73 37.00 3.18
3414 5687 7.047460 ACTTGAAGCTTCATTTTCAGTCAAT 57.953 32.000 28.89 5.22 37.00 2.57
3415 5688 8.169977 ACTTGAAGCTTCATTTTCAGTCAATA 57.830 30.769 28.89 9.02 37.00 1.90
3416 5689 8.632679 ACTTGAAGCTTCATTTTCAGTCAATAA 58.367 29.630 28.89 8.59 37.00 1.40
3417 5690 9.467258 CTTGAAGCTTCATTTTCAGTCAATAAA 57.533 29.630 28.89 7.95 37.00 1.40
3418 5691 9.814899 TTGAAGCTTCATTTTCAGTCAATAAAA 57.185 25.926 28.89 5.73 37.00 1.52
3419 5692 9.985730 TGAAGCTTCATTTTCAGTCAATAAAAT 57.014 25.926 25.16 0.00 36.08 1.82
3421 5694 8.992835 AGCTTCATTTTCAGTCAATAAAATCC 57.007 30.769 0.00 0.00 34.01 3.01
3422 5695 8.587608 AGCTTCATTTTCAGTCAATAAAATCCA 58.412 29.630 0.00 0.00 34.01 3.41
3423 5696 9.374838 GCTTCATTTTCAGTCAATAAAATCCAT 57.625 29.630 0.00 0.00 34.01 3.41
3431 5704 9.859427 TTCAGTCAATAAAATCCATCATTTGTC 57.141 29.630 0.00 0.00 34.69 3.18
3432 5705 9.022884 TCAGTCAATAAAATCCATCATTTGTCA 57.977 29.630 0.00 0.00 34.69 3.58
3433 5706 9.642327 CAGTCAATAAAATCCATCATTTGTCAA 57.358 29.630 0.00 0.00 34.69 3.18
3460 5733 8.966069 AAAAGAACTAACTTTAGCAGAGAACT 57.034 30.769 0.00 0.00 38.86 3.01
3461 5734 7.954788 AAGAACTAACTTTAGCAGAGAACTG 57.045 36.000 0.00 0.00 45.91 3.16
3462 5735 7.041712 AAAGAACTAACTTTAGCAGAGAACTGC 60.042 37.037 13.33 13.33 46.95 4.40
3471 5744 1.719600 CAGAGAACTGCTAGTGCCAC 58.280 55.000 0.00 0.00 37.33 5.01
3472 5745 0.610687 AGAGAACTGCTAGTGCCACC 59.389 55.000 0.00 0.00 38.71 4.61
3473 5746 0.391793 GAGAACTGCTAGTGCCACCC 60.392 60.000 0.00 0.00 38.71 4.61
3474 5747 0.838122 AGAACTGCTAGTGCCACCCT 60.838 55.000 0.00 0.00 38.71 4.34
3475 5748 0.674895 GAACTGCTAGTGCCACCCTG 60.675 60.000 0.00 0.00 38.71 4.45
3476 5749 1.127567 AACTGCTAGTGCCACCCTGA 61.128 55.000 0.00 0.00 38.71 3.86
3477 5750 0.911525 ACTGCTAGTGCCACCCTGAT 60.912 55.000 0.00 0.00 38.71 2.90
3478 5751 0.463295 CTGCTAGTGCCACCCTGATG 60.463 60.000 0.00 0.00 38.71 3.07
3479 5752 1.200760 TGCTAGTGCCACCCTGATGT 61.201 55.000 0.00 0.00 38.71 3.06
3480 5753 0.745845 GCTAGTGCCACCCTGATGTG 60.746 60.000 0.00 0.00 35.98 3.21
3481 5754 0.745845 CTAGTGCCACCCTGATGTGC 60.746 60.000 0.00 0.00 34.85 4.57
3482 5755 1.487850 TAGTGCCACCCTGATGTGCA 61.488 55.000 0.00 0.00 34.85 4.57
3483 5756 2.034532 TGCCACCCTGATGTGCAG 59.965 61.111 0.00 0.00 44.49 4.41
3484 5757 3.446570 GCCACCCTGATGTGCAGC 61.447 66.667 0.00 0.00 43.50 5.25
3485 5758 2.034532 CCACCCTGATGTGCAGCA 59.965 61.111 0.00 0.00 43.50 4.41
3486 5759 2.044555 CCACCCTGATGTGCAGCAG 61.045 63.158 10.16 10.16 43.50 4.24
3487 5760 1.002990 CACCCTGATGTGCAGCAGA 60.003 57.895 17.70 0.00 46.99 4.26
3488 5761 0.607217 CACCCTGATGTGCAGCAGAA 60.607 55.000 17.70 0.00 46.99 3.02
3489 5762 0.607489 ACCCTGATGTGCAGCAGAAC 60.607 55.000 17.70 0.00 46.99 3.01
3490 5763 1.310933 CCCTGATGTGCAGCAGAACC 61.311 60.000 17.70 0.00 46.99 3.62
3491 5764 1.642037 CCTGATGTGCAGCAGAACCG 61.642 60.000 17.70 0.00 46.99 4.44
3492 5765 1.642037 CTGATGTGCAGCAGAACCGG 61.642 60.000 11.54 0.00 46.99 5.28
3493 5766 3.044059 GATGTGCAGCAGAACCGGC 62.044 63.158 0.00 0.00 0.00 6.13
3512 5785 3.568686 CGGCGATCGGACCAAAAA 58.431 55.556 18.30 0.00 34.75 1.94
3530 5803 1.675552 AAAACCAGAACCAGTGACCG 58.324 50.000 0.00 0.00 0.00 4.79
3531 5804 0.818040 AAACCAGAACCAGTGACCGC 60.818 55.000 0.00 0.00 0.00 5.68
3532 5805 2.738521 CCAGAACCAGTGACCGCG 60.739 66.667 0.00 0.00 0.00 6.46
3533 5806 2.738521 CAGAACCAGTGACCGCGG 60.739 66.667 26.86 26.86 0.00 6.46
3534 5807 4.681978 AGAACCAGTGACCGCGGC 62.682 66.667 28.58 19.01 0.00 6.53
3545 5818 2.782615 CCGCGGCGGTTCTTTAAG 59.217 61.111 32.14 4.07 42.73 1.85
3546 5819 2.097728 CGCGGCGGTTCTTTAAGC 59.902 61.111 15.84 0.00 0.00 3.09
3547 5820 2.483745 GCGGCGGTTCTTTAAGCC 59.516 61.111 9.78 0.00 45.67 4.35
3548 5821 2.038837 GCGGCGGTTCTTTAAGCCT 61.039 57.895 9.78 0.00 46.85 4.58
3549 5822 1.583495 GCGGCGGTTCTTTAAGCCTT 61.583 55.000 9.78 0.00 46.85 4.35
3550 5823 0.168128 CGGCGGTTCTTTAAGCCTTG 59.832 55.000 0.00 0.00 46.85 3.61
3551 5824 0.109272 GGCGGTTCTTTAAGCCTTGC 60.109 55.000 0.00 0.00 45.67 4.01
3552 5825 0.596082 GCGGTTCTTTAAGCCTTGCA 59.404 50.000 0.00 0.00 0.00 4.08
3553 5826 1.401539 GCGGTTCTTTAAGCCTTGCAG 60.402 52.381 0.00 0.00 0.00 4.41
3554 5827 2.151202 CGGTTCTTTAAGCCTTGCAGA 58.849 47.619 0.00 0.00 0.00 4.26
3555 5828 2.095718 CGGTTCTTTAAGCCTTGCAGAC 60.096 50.000 0.00 0.00 0.00 3.51
3556 5829 2.229062 GGTTCTTTAAGCCTTGCAGACC 59.771 50.000 0.00 0.00 0.00 3.85
3557 5830 3.149981 GTTCTTTAAGCCTTGCAGACCT 58.850 45.455 0.00 0.00 0.00 3.85
3558 5831 3.508845 TCTTTAAGCCTTGCAGACCTT 57.491 42.857 0.00 0.00 0.00 3.50
3559 5832 3.832527 TCTTTAAGCCTTGCAGACCTTT 58.167 40.909 0.00 0.00 0.00 3.11
3560 5833 3.821033 TCTTTAAGCCTTGCAGACCTTTC 59.179 43.478 0.00 0.00 0.00 2.62
3561 5834 1.808411 TAAGCCTTGCAGACCTTTCG 58.192 50.000 0.00 0.00 0.00 3.46
3562 5835 0.108585 AAGCCTTGCAGACCTTTCGA 59.891 50.000 0.00 0.00 0.00 3.71
3563 5836 0.321122 AGCCTTGCAGACCTTTCGAG 60.321 55.000 0.00 0.00 0.00 4.04
3564 5837 1.916697 GCCTTGCAGACCTTTCGAGC 61.917 60.000 0.00 0.00 0.00 5.03
3565 5838 0.603707 CCTTGCAGACCTTTCGAGCA 60.604 55.000 0.00 0.00 36.33 4.26
3566 5839 1.229428 CTTGCAGACCTTTCGAGCAA 58.771 50.000 5.95 5.95 41.98 3.91
3567 5840 1.808945 CTTGCAGACCTTTCGAGCAAT 59.191 47.619 6.47 0.00 42.71 3.56
3568 5841 1.442769 TGCAGACCTTTCGAGCAATC 58.557 50.000 0.00 0.00 35.55 2.67
3569 5842 0.729690 GCAGACCTTTCGAGCAATCC 59.270 55.000 0.00 0.00 0.00 3.01
3570 5843 1.945819 GCAGACCTTTCGAGCAATCCA 60.946 52.381 0.00 0.00 0.00 3.41
3571 5844 2.636830 CAGACCTTTCGAGCAATCCAT 58.363 47.619 0.00 0.00 0.00 3.41
3572 5845 2.611292 CAGACCTTTCGAGCAATCCATC 59.389 50.000 0.00 0.00 0.00 3.51
3573 5846 1.943340 GACCTTTCGAGCAATCCATCC 59.057 52.381 0.00 0.00 0.00 3.51
3574 5847 0.940126 CCTTTCGAGCAATCCATCCG 59.060 55.000 0.00 0.00 0.00 4.18
3575 5848 0.940126 CTTTCGAGCAATCCATCCGG 59.060 55.000 0.00 0.00 0.00 5.14
3585 5858 3.543884 TCCATCCGGAAAAAGTCGG 57.456 52.632 9.01 0.47 46.89 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 6.370593 TGTCGCTCAAACAGATGTTATTTTC 58.629 36.000 0.00 0.00 37.25 2.29
23 24 5.079689 TCATATTACCTGTCGCTCAAACA 57.920 39.130 0.00 0.00 0.00 2.83
74 76 5.105432 ACCTAAGGTTGAACGAAGGATACTC 60.105 44.000 13.84 0.00 38.74 2.59
171 174 2.289133 GGGCAATTAAGGCGGTTTTCAA 60.289 45.455 0.00 0.00 34.40 2.69
172 175 1.273886 GGGCAATTAAGGCGGTTTTCA 59.726 47.619 0.00 0.00 34.40 2.69
206 209 9.859427 TGGCTTTATCAAAGTGAAAATGATAAG 57.141 29.630 7.31 4.67 43.23 1.73
218 222 6.840780 AGCACTTATTGGCTTTATCAAAGT 57.159 33.333 1.02 0.00 40.64 2.66
272 276 9.474313 AATAAATTTCTGCCTGTGATTTACCTA 57.526 29.630 0.00 0.00 0.00 3.08
313 317 9.388506 CCTGCCCTTATTAATATGATTCTGTAG 57.611 37.037 9.38 0.00 0.00 2.74
332 336 0.106015 GGCCATGATTTACCTGCCCT 60.106 55.000 0.00 0.00 0.00 5.19
375 379 2.522836 TTTCCAATGCGTTGCAACAT 57.477 40.000 28.01 13.13 43.62 2.71
414 418 4.634199 ACAATGGCTTTGTCTCCAAAATG 58.366 39.130 12.50 0.00 45.55 2.32
427 431 5.789643 TTTTCTAGCAGAAACAATGGCTT 57.210 34.783 9.83 0.00 43.25 4.35
536 1205 3.574826 GGGTAGCTCCAGGTCTTATAGTG 59.425 52.174 0.00 0.00 38.11 2.74
554 1229 3.876341 ACTTTGAGTTTGTGTTCGGGTA 58.124 40.909 0.00 0.00 0.00 3.69
610 1285 8.027524 AGTATTCATCTAATCTGCCTGAAAGA 57.972 34.615 0.00 0.00 34.07 2.52
667 1347 3.902881 ACGGATTGCTCTCATCTCTTT 57.097 42.857 0.00 0.00 0.00 2.52
675 1355 2.670414 GCATATGCTACGGATTGCTCTC 59.330 50.000 20.64 0.00 38.21 3.20
708 1396 2.158564 AGGTGATTGGTGCATATCCAGG 60.159 50.000 0.00 0.00 36.28 4.45
719 1407 3.614092 CTTGTCAGCATAGGTGATTGGT 58.386 45.455 2.01 0.00 42.05 3.67
720 1408 2.357009 GCTTGTCAGCATAGGTGATTGG 59.643 50.000 2.01 0.00 46.49 3.16
755 1445 6.352016 ACATGCACCCAAACATAAACATTA 57.648 33.333 0.00 0.00 0.00 1.90
760 1463 4.448537 GCTACATGCACCCAAACATAAA 57.551 40.909 0.00 0.00 42.31 1.40
851 1556 0.593263 GCCGACGTCATTACCTACGG 60.593 60.000 17.16 9.26 43.25 4.02
897 1602 4.078758 CGTATTAACATGCGCGCG 57.921 55.556 28.44 28.44 31.40 6.86
907 1616 8.780846 TTGATTCCAAAACTAGAGCGTATTAA 57.219 30.769 0.00 0.00 0.00 1.40
918 1627 8.572185 TCACGAAATCATTTGATTCCAAAACTA 58.428 29.630 6.27 0.00 44.49 2.24
930 1639 7.954248 GGATCGATCTTATCACGAAATCATTTG 59.046 37.037 23.96 0.00 39.38 2.32
961 1693 6.639938 TGGATGGAGGTATTTATAGAAGGGA 58.360 40.000 0.00 0.00 0.00 4.20
980 1743 3.392285 TGTGGGGAAGATGTATCTGGATG 59.608 47.826 0.00 0.00 37.19 3.51
1005 1779 1.064952 GGTCGGTGTGTTCTTGTTTGG 59.935 52.381 0.00 0.00 0.00 3.28
1007 1781 1.340211 TGGGTCGGTGTGTTCTTGTTT 60.340 47.619 0.00 0.00 0.00 2.83
1039 1813 5.874810 CCGATTTCTCAACCAGAAGTGATTA 59.125 40.000 0.00 0.00 42.37 1.75
1059 1854 3.257127 GCTAGTTATCTCTTGCCTCCGAT 59.743 47.826 0.00 0.00 31.97 4.18
1073 1868 3.835395 GGAGACATGGCTAGGCTAGTTAT 59.165 47.826 21.92 13.66 0.00 1.89
1076 1875 1.710816 GGAGACATGGCTAGGCTAGT 58.289 55.000 21.92 15.09 0.00 2.57
1159 1958 4.390909 ACAAAGTCGACGAACTTGTTCTTT 59.609 37.500 16.19 9.75 39.40 2.52
1180 1979 5.048504 AGTCAAGACGAAATACTTACCGACA 60.049 40.000 0.00 0.00 36.20 4.35
1191 1990 3.502123 TCCCCAAAGTCAAGACGAAAT 57.498 42.857 0.00 0.00 36.20 2.17
1192 1991 3.284793 TTCCCCAAAGTCAAGACGAAA 57.715 42.857 0.00 0.00 36.20 3.46
1205 2004 4.952845 TGAATCCACCATTATTTCCCCAA 58.047 39.130 0.00 0.00 0.00 4.12
1210 2018 8.010733 TCTTCCAATGAATCCACCATTATTTC 57.989 34.615 0.00 0.00 33.35 2.17
1227 2036 4.020928 TGCAAATGTCAGCATTCTTCCAAT 60.021 37.500 0.00 0.00 43.89 3.16
1269 2099 2.166907 CCAGGTCCAGATGGTACTCT 57.833 55.000 0.00 0.00 36.34 3.24
1512 2345 1.107114 GCTCGATGGAGTCCTTCTCA 58.893 55.000 19.79 8.03 44.40 3.27
1684 2520 1.134907 CCCGTCGTAGTTGGCATAGTT 60.135 52.381 0.00 0.00 0.00 2.24
1857 2693 3.382832 CCTTCGACCAGCCCGTCT 61.383 66.667 0.00 0.00 0.00 4.18
2024 2860 1.973281 ATCTTTGCCTGGTGTGCCG 60.973 57.895 0.00 0.00 37.67 5.69
2029 2865 3.291611 GGCCATCTTTGCCTGGTG 58.708 61.111 0.00 0.00 45.70 4.17
2109 2951 1.136147 GATCACCTTGCGCTGCTTG 59.864 57.895 9.73 0.67 0.00 4.01
2172 3014 2.554365 GATGCTGCGCGTCAGTGTTC 62.554 60.000 24.37 16.96 43.32 3.18
2508 4755 1.606737 GCCAGGTTCACAGAGACAGAC 60.607 57.143 0.00 0.00 0.00 3.51
2615 4879 9.620660 CACAAACAAAGTAAACTAACACTTCTT 57.379 29.630 0.00 0.00 33.92 2.52
2629 4896 5.117584 ACGTATGGACACACAAACAAAGTA 58.882 37.500 0.00 0.00 0.00 2.24
2667 4934 6.198687 CGAGCTTACAAAGTCATGACAAAAA 58.801 36.000 27.02 12.41 0.00 1.94
2668 4935 5.747565 CGAGCTTACAAAGTCATGACAAAA 58.252 37.500 27.02 12.09 0.00 2.44
2670 4937 3.186409 GCGAGCTTACAAAGTCATGACAA 59.814 43.478 27.02 11.48 0.00 3.18
2671 4938 2.736721 GCGAGCTTACAAAGTCATGACA 59.263 45.455 27.02 3.53 0.00 3.58
2672 4939 2.996621 AGCGAGCTTACAAAGTCATGAC 59.003 45.455 18.47 18.47 0.00 3.06
2673 4940 2.995939 CAGCGAGCTTACAAAGTCATGA 59.004 45.455 0.00 0.00 0.00 3.07
2674 4941 2.475187 GCAGCGAGCTTACAAAGTCATG 60.475 50.000 0.00 0.00 41.15 3.07
2675 4942 1.734465 GCAGCGAGCTTACAAAGTCAT 59.266 47.619 0.00 0.00 41.15 3.06
2676 4943 1.148310 GCAGCGAGCTTACAAAGTCA 58.852 50.000 0.00 0.00 41.15 3.41
2677 4944 0.444260 GGCAGCGAGCTTACAAAGTC 59.556 55.000 0.00 0.00 44.79 3.01
2678 4945 0.035458 AGGCAGCGAGCTTACAAAGT 59.965 50.000 0.00 0.00 44.79 2.66
2680 4947 1.266718 CAAAGGCAGCGAGCTTACAAA 59.733 47.619 0.00 0.00 44.79 2.83
2681 4948 0.874390 CAAAGGCAGCGAGCTTACAA 59.126 50.000 0.00 0.00 44.79 2.41
2682 4949 0.955428 CCAAAGGCAGCGAGCTTACA 60.955 55.000 0.00 0.00 44.79 2.41
2683 4950 0.955919 ACCAAAGGCAGCGAGCTTAC 60.956 55.000 0.00 0.00 44.79 2.34
2684 4951 0.611200 TACCAAAGGCAGCGAGCTTA 59.389 50.000 0.00 0.00 44.79 3.09
2685 4952 0.250727 TTACCAAAGGCAGCGAGCTT 60.251 50.000 0.00 0.00 44.79 3.74
2686 4953 0.674895 CTTACCAAAGGCAGCGAGCT 60.675 55.000 4.24 0.00 44.79 4.09
2695 4962 5.048507 GGTTACGATAGAGCTTACCAAAGG 58.951 45.833 0.00 0.00 41.38 3.11
2700 4967 3.563390 ACGAGGTTACGATAGAGCTTACC 59.437 47.826 0.00 0.00 41.38 2.85
2703 4970 5.530171 TGATTACGAGGTTACGATAGAGCTT 59.470 40.000 0.00 0.00 41.38 3.74
2715 4982 4.566987 GTCTTTCCTGTGATTACGAGGTT 58.433 43.478 0.00 0.00 0.00 3.50
2730 4997 2.405172 AGTTTCTCGCTTCGTCTTTCC 58.595 47.619 0.00 0.00 0.00 3.13
2737 5004 5.867166 ACTTAGTAGTAGTTTCTCGCTTCG 58.133 41.667 0.00 0.00 31.21 3.79
2856 5123 4.764679 TGAACACATGTGCTTGTTATCC 57.235 40.909 25.68 6.95 36.06 2.59
2912 5180 5.766150 TTTGTCCAAGTGAATGTTACTGG 57.234 39.130 0.00 0.00 0.00 4.00
2958 5227 5.221641 ACTGAATGTTGCTAGTGGTGTAAGA 60.222 40.000 0.00 0.00 0.00 2.10
2961 5230 4.617253 ACTGAATGTTGCTAGTGGTGTA 57.383 40.909 0.00 0.00 0.00 2.90
2997 5269 0.745845 CTCCAACAATCGAGGGGCAG 60.746 60.000 0.00 0.00 0.00 4.85
2998 5270 1.198094 TCTCCAACAATCGAGGGGCA 61.198 55.000 0.00 0.00 0.00 5.36
2999 5271 0.744771 GTCTCCAACAATCGAGGGGC 60.745 60.000 0.00 0.00 0.00 5.80
3000 5272 0.905357 AGTCTCCAACAATCGAGGGG 59.095 55.000 0.00 0.00 0.00 4.79
3004 5276 5.758296 GGCATATAAAGTCTCCAACAATCGA 59.242 40.000 0.00 0.00 0.00 3.59
3005 5277 5.527214 TGGCATATAAAGTCTCCAACAATCG 59.473 40.000 0.00 0.00 0.00 3.34
3050 5323 2.919602 ACTTCCCATGTGACCCATAACT 59.080 45.455 0.00 0.00 30.71 2.24
3051 5324 3.016736 CACTTCCCATGTGACCCATAAC 58.983 50.000 0.00 0.00 37.60 1.89
3052 5325 2.620367 GCACTTCCCATGTGACCCATAA 60.620 50.000 0.00 0.00 37.60 1.90
3054 5327 0.323725 GCACTTCCCATGTGACCCAT 60.324 55.000 0.00 0.00 37.60 4.00
3055 5328 1.074775 GCACTTCCCATGTGACCCA 59.925 57.895 0.00 0.00 37.60 4.51
3056 5329 1.678970 GGCACTTCCCATGTGACCC 60.679 63.158 0.00 0.00 37.47 4.46
3116 5389 2.958355 AGTTGACAACCACCTTGAATGG 59.042 45.455 14.72 0.00 43.43 3.16
3122 5395 2.799126 TGACAGTTGACAACCACCTT 57.201 45.000 14.72 0.00 0.00 3.50
3132 5405 4.397420 AGCAACACCATAATGACAGTTGA 58.603 39.130 0.00 0.00 38.80 3.18
3138 5411 7.320443 TCTTCAATAGCAACACCATAATGAC 57.680 36.000 0.00 0.00 0.00 3.06
3139 5412 7.936496 TTCTTCAATAGCAACACCATAATGA 57.064 32.000 0.00 0.00 0.00 2.57
3140 5413 8.627403 AGATTCTTCAATAGCAACACCATAATG 58.373 33.333 0.00 0.00 0.00 1.90
3141 5414 8.757982 AGATTCTTCAATAGCAACACCATAAT 57.242 30.769 0.00 0.00 0.00 1.28
3142 5415 7.828717 TGAGATTCTTCAATAGCAACACCATAA 59.171 33.333 0.00 0.00 0.00 1.90
3143 5416 7.280876 GTGAGATTCTTCAATAGCAACACCATA 59.719 37.037 0.00 0.00 0.00 2.74
3144 5417 6.094603 GTGAGATTCTTCAATAGCAACACCAT 59.905 38.462 0.00 0.00 0.00 3.55
3145 5418 5.412594 GTGAGATTCTTCAATAGCAACACCA 59.587 40.000 0.00 0.00 0.00 4.17
3146 5419 5.645497 AGTGAGATTCTTCAATAGCAACACC 59.355 40.000 0.00 0.00 0.00 4.16
3147 5420 6.734104 AGTGAGATTCTTCAATAGCAACAC 57.266 37.500 0.00 0.00 0.00 3.32
3148 5421 7.445096 TGAAAGTGAGATTCTTCAATAGCAACA 59.555 33.333 0.00 0.00 0.00 3.33
3149 5422 7.810658 TGAAAGTGAGATTCTTCAATAGCAAC 58.189 34.615 0.00 0.00 0.00 4.17
3150 5423 7.984422 TGAAAGTGAGATTCTTCAATAGCAA 57.016 32.000 0.00 0.00 0.00 3.91
3151 5424 8.571461 AATGAAAGTGAGATTCTTCAATAGCA 57.429 30.769 0.00 0.00 0.00 3.49
3155 5428 9.471702 ACCATAATGAAAGTGAGATTCTTCAAT 57.528 29.630 0.00 0.00 0.00 2.57
3156 5429 8.733458 CACCATAATGAAAGTGAGATTCTTCAA 58.267 33.333 0.00 0.00 31.79 2.69
3157 5430 7.884877 ACACCATAATGAAAGTGAGATTCTTCA 59.115 33.333 0.00 0.00 34.33 3.02
3158 5431 8.273780 ACACCATAATGAAAGTGAGATTCTTC 57.726 34.615 0.00 0.00 34.33 2.87
3159 5432 7.884877 TGACACCATAATGAAAGTGAGATTCTT 59.115 33.333 0.00 0.00 34.33 2.52
3160 5433 7.397221 TGACACCATAATGAAAGTGAGATTCT 58.603 34.615 0.00 0.00 34.33 2.40
3161 5434 7.615582 TGACACCATAATGAAAGTGAGATTC 57.384 36.000 0.00 0.00 34.33 2.52
3162 5435 7.830697 TCATGACACCATAATGAAAGTGAGATT 59.169 33.333 0.00 0.00 34.33 2.40
3163 5436 7.341030 TCATGACACCATAATGAAAGTGAGAT 58.659 34.615 0.00 0.00 34.33 2.75
3164 5437 6.710278 TCATGACACCATAATGAAAGTGAGA 58.290 36.000 0.00 0.00 34.33 3.27
3165 5438 6.820152 TCTCATGACACCATAATGAAAGTGAG 59.180 38.462 0.00 0.00 34.33 3.51
3166 5439 6.710278 TCTCATGACACCATAATGAAAGTGA 58.290 36.000 0.00 0.00 34.33 3.41
3167 5440 6.990341 TCTCATGACACCATAATGAAAGTG 57.010 37.500 0.00 0.00 36.30 3.16
3168 5441 6.544931 CCATCTCATGACACCATAATGAAAGT 59.455 38.462 0.00 0.00 30.28 2.66
3169 5442 6.544931 ACCATCTCATGACACCATAATGAAAG 59.455 38.462 0.00 0.00 30.28 2.62
3170 5443 6.425735 ACCATCTCATGACACCATAATGAAA 58.574 36.000 0.00 0.00 30.28 2.69
3171 5444 6.005066 ACCATCTCATGACACCATAATGAA 57.995 37.500 0.00 0.00 30.28 2.57
3172 5445 5.635278 ACCATCTCATGACACCATAATGA 57.365 39.130 0.00 0.00 0.00 2.57
3173 5446 5.009310 CCAACCATCTCATGACACCATAATG 59.991 44.000 0.00 0.00 0.00 1.90
3174 5447 5.135383 CCAACCATCTCATGACACCATAAT 58.865 41.667 0.00 0.00 0.00 1.28
3175 5448 4.018506 ACCAACCATCTCATGACACCATAA 60.019 41.667 0.00 0.00 0.00 1.90
3176 5449 3.523157 ACCAACCATCTCATGACACCATA 59.477 43.478 0.00 0.00 0.00 2.74
3177 5450 2.309755 ACCAACCATCTCATGACACCAT 59.690 45.455 0.00 0.00 0.00 3.55
3178 5451 1.704628 ACCAACCATCTCATGACACCA 59.295 47.619 0.00 0.00 0.00 4.17
3179 5452 2.086869 CACCAACCATCTCATGACACC 58.913 52.381 0.00 0.00 0.00 4.16
3180 5453 1.470098 GCACCAACCATCTCATGACAC 59.530 52.381 0.00 0.00 0.00 3.67
3181 5454 1.825090 GCACCAACCATCTCATGACA 58.175 50.000 0.00 0.00 0.00 3.58
3182 5455 0.729116 CGCACCAACCATCTCATGAC 59.271 55.000 0.00 0.00 0.00 3.06
3183 5456 0.392863 CCGCACCAACCATCTCATGA 60.393 55.000 0.00 0.00 0.00 3.07
3184 5457 0.392863 TCCGCACCAACCATCTCATG 60.393 55.000 0.00 0.00 0.00 3.07
3185 5458 0.548031 ATCCGCACCAACCATCTCAT 59.452 50.000 0.00 0.00 0.00 2.90
3186 5459 0.392863 CATCCGCACCAACCATCTCA 60.393 55.000 0.00 0.00 0.00 3.27
3187 5460 1.718757 GCATCCGCACCAACCATCTC 61.719 60.000 0.00 0.00 38.36 2.75
3188 5461 1.750399 GCATCCGCACCAACCATCT 60.750 57.895 0.00 0.00 38.36 2.90
3189 5462 2.800736 GCATCCGCACCAACCATC 59.199 61.111 0.00 0.00 38.36 3.51
3190 5463 3.133464 CGCATCCGCACCAACCAT 61.133 61.111 0.00 0.00 38.40 3.55
3193 5466 3.361977 AACCGCATCCGCACCAAC 61.362 61.111 0.00 0.00 38.40 3.77
3194 5467 3.361158 CAACCGCATCCGCACCAA 61.361 61.111 0.00 0.00 38.40 3.67
3195 5468 4.634703 ACAACCGCATCCGCACCA 62.635 61.111 0.00 0.00 38.40 4.17
3196 5469 3.361977 AACAACCGCATCCGCACC 61.362 61.111 0.00 0.00 38.40 5.01
3197 5470 2.126888 CAACAACCGCATCCGCAC 60.127 61.111 0.00 0.00 38.40 5.34
3198 5471 0.885150 TAACAACAACCGCATCCGCA 60.885 50.000 0.00 0.00 38.40 5.69
3199 5472 0.450184 ATAACAACAACCGCATCCGC 59.550 50.000 0.00 0.00 0.00 5.54
3200 5473 4.545823 AATATAACAACAACCGCATCCG 57.454 40.909 0.00 0.00 0.00 4.18
3201 5474 6.096695 ACAAAATATAACAACAACCGCATCC 58.903 36.000 0.00 0.00 0.00 3.51
3202 5475 6.021782 CGACAAAATATAACAACAACCGCATC 60.022 38.462 0.00 0.00 0.00 3.91
3203 5476 5.797934 CGACAAAATATAACAACAACCGCAT 59.202 36.000 0.00 0.00 0.00 4.73
3204 5477 5.049612 TCGACAAAATATAACAACAACCGCA 60.050 36.000 0.00 0.00 0.00 5.69
3205 5478 5.383958 TCGACAAAATATAACAACAACCGC 58.616 37.500 0.00 0.00 0.00 5.68
3206 5479 6.406896 CGATCGACAAAATATAACAACAACCG 59.593 38.462 10.26 0.00 0.00 4.44
3207 5480 6.193959 GCGATCGACAAAATATAACAACAACC 59.806 38.462 21.57 0.00 0.00 3.77
3208 5481 6.739100 TGCGATCGACAAAATATAACAACAAC 59.261 34.615 21.57 0.00 0.00 3.32
3209 5482 6.832804 TGCGATCGACAAAATATAACAACAA 58.167 32.000 21.57 0.00 0.00 2.83
3210 5483 6.311690 TCTGCGATCGACAAAATATAACAACA 59.688 34.615 21.57 0.00 0.00 3.33
3211 5484 6.701937 TCTGCGATCGACAAAATATAACAAC 58.298 36.000 21.57 0.00 0.00 3.32
3212 5485 6.895607 TCTGCGATCGACAAAATATAACAA 57.104 33.333 21.57 0.00 0.00 2.83
3213 5486 7.477144 AATCTGCGATCGACAAAATATAACA 57.523 32.000 21.57 1.17 0.00 2.41
3214 5487 7.850982 ACAAATCTGCGATCGACAAAATATAAC 59.149 33.333 21.57 0.00 0.00 1.89
3215 5488 7.915508 ACAAATCTGCGATCGACAAAATATAA 58.084 30.769 21.57 0.00 0.00 0.98
3216 5489 7.477144 ACAAATCTGCGATCGACAAAATATA 57.523 32.000 21.57 0.00 0.00 0.86
3217 5490 6.363577 ACAAATCTGCGATCGACAAAATAT 57.636 33.333 21.57 5.20 0.00 1.28
3218 5491 5.794687 ACAAATCTGCGATCGACAAAATA 57.205 34.783 21.57 3.16 0.00 1.40
3219 5492 4.685169 ACAAATCTGCGATCGACAAAAT 57.315 36.364 21.57 9.69 0.00 1.82
3220 5493 4.481930 AACAAATCTGCGATCGACAAAA 57.518 36.364 21.57 7.86 0.00 2.44
3221 5494 4.024472 TCAAACAAATCTGCGATCGACAAA 60.024 37.500 21.57 3.45 0.00 2.83
3222 5495 3.496507 TCAAACAAATCTGCGATCGACAA 59.503 39.130 21.57 2.39 0.00 3.18
3223 5496 3.063485 TCAAACAAATCTGCGATCGACA 58.937 40.909 21.57 15.18 0.00 4.35
3224 5497 3.722555 TCAAACAAATCTGCGATCGAC 57.277 42.857 21.57 10.98 0.00 4.20
3225 5498 4.944962 AATCAAACAAATCTGCGATCGA 57.055 36.364 21.57 3.01 0.00 3.59
3226 5499 5.088068 TCAAATCAAACAAATCTGCGATCG 58.912 37.500 11.69 11.69 0.00 3.69
3227 5500 7.515957 AATCAAATCAAACAAATCTGCGATC 57.484 32.000 0.00 0.00 0.00 3.69
3228 5501 7.894376 AAATCAAATCAAACAAATCTGCGAT 57.106 28.000 0.00 0.00 0.00 4.58
3229 5502 7.712264 AAAATCAAATCAAACAAATCTGCGA 57.288 28.000 0.00 0.00 0.00 5.10
3260 5533 3.270877 ACCAAAGCTATGCCTAAACGAG 58.729 45.455 0.00 0.00 0.00 4.18
3261 5534 3.055385 AGACCAAAGCTATGCCTAAACGA 60.055 43.478 0.00 0.00 0.00 3.85
3262 5535 3.270877 AGACCAAAGCTATGCCTAAACG 58.729 45.455 0.00 0.00 0.00 3.60
3263 5536 6.944234 ATAAGACCAAAGCTATGCCTAAAC 57.056 37.500 0.00 0.00 0.00 2.01
3264 5537 8.436778 TCATATAAGACCAAAGCTATGCCTAAA 58.563 33.333 0.00 0.00 0.00 1.85
3265 5538 7.973402 TCATATAAGACCAAAGCTATGCCTAA 58.027 34.615 0.00 0.00 0.00 2.69
3266 5539 7.553504 TCATATAAGACCAAAGCTATGCCTA 57.446 36.000 0.00 0.00 0.00 3.93
3267 5540 6.439636 TCATATAAGACCAAAGCTATGCCT 57.560 37.500 0.00 0.00 0.00 4.75
3268 5541 7.693969 AATCATATAAGACCAAAGCTATGCC 57.306 36.000 0.00 0.00 0.00 4.40
3282 5555 8.680001 TGCTGGCAAATAGCATAATCATATAAG 58.320 33.333 0.00 0.00 45.52 1.73
3283 5556 8.578448 TGCTGGCAAATAGCATAATCATATAA 57.422 30.769 0.00 0.00 45.52 0.98
3295 5568 2.749280 AAAACCTGCTGGCAAATAGC 57.251 45.000 9.95 0.00 44.65 2.97
3296 5569 4.240096 CAGAAAAACCTGCTGGCAAATAG 58.760 43.478 9.95 0.00 36.63 1.73
3297 5570 3.640967 ACAGAAAAACCTGCTGGCAAATA 59.359 39.130 9.95 0.00 37.68 1.40
3298 5571 2.435437 ACAGAAAAACCTGCTGGCAAAT 59.565 40.909 9.95 0.00 37.68 2.32
3299 5572 1.830477 ACAGAAAAACCTGCTGGCAAA 59.170 42.857 9.95 0.00 37.68 3.68
3300 5573 1.484038 ACAGAAAAACCTGCTGGCAA 58.516 45.000 9.95 0.00 37.68 4.52
3301 5574 2.356665 TACAGAAAAACCTGCTGGCA 57.643 45.000 9.95 0.00 37.68 4.92
3302 5575 2.558359 ACATACAGAAAAACCTGCTGGC 59.442 45.455 9.95 0.00 37.68 4.85
3303 5576 3.569701 ACACATACAGAAAAACCTGCTGG 59.430 43.478 8.29 8.29 37.68 4.85
3304 5577 4.836125 ACACATACAGAAAAACCTGCTG 57.164 40.909 0.00 0.00 37.68 4.41
3305 5578 4.037923 CCAACACATACAGAAAAACCTGCT 59.962 41.667 0.00 0.00 37.68 4.24
3306 5579 4.202111 ACCAACACATACAGAAAAACCTGC 60.202 41.667 0.00 0.00 37.68 4.85
3307 5580 5.163561 ACACCAACACATACAGAAAAACCTG 60.164 40.000 0.00 0.00 39.93 4.00
3308 5581 4.953579 ACACCAACACATACAGAAAAACCT 59.046 37.500 0.00 0.00 0.00 3.50
3309 5582 5.257082 ACACCAACACATACAGAAAAACC 57.743 39.130 0.00 0.00 0.00 3.27
3310 5583 6.326375 TCAACACCAACACATACAGAAAAAC 58.674 36.000 0.00 0.00 0.00 2.43
3311 5584 6.516739 TCAACACCAACACATACAGAAAAA 57.483 33.333 0.00 0.00 0.00 1.94
3312 5585 6.707440 ATCAACACCAACACATACAGAAAA 57.293 33.333 0.00 0.00 0.00 2.29
3313 5586 6.096141 ACAATCAACACCAACACATACAGAAA 59.904 34.615 0.00 0.00 0.00 2.52
3314 5587 5.592282 ACAATCAACACCAACACATACAGAA 59.408 36.000 0.00 0.00 0.00 3.02
3315 5588 5.008514 CACAATCAACACCAACACATACAGA 59.991 40.000 0.00 0.00 0.00 3.41
3316 5589 5.214417 CACAATCAACACCAACACATACAG 58.786 41.667 0.00 0.00 0.00 2.74
3317 5590 4.642437 ACACAATCAACACCAACACATACA 59.358 37.500 0.00 0.00 0.00 2.29
3318 5591 4.975502 CACACAATCAACACCAACACATAC 59.024 41.667 0.00 0.00 0.00 2.39
3319 5592 4.498850 GCACACAATCAACACCAACACATA 60.499 41.667 0.00 0.00 0.00 2.29
3320 5593 3.737663 GCACACAATCAACACCAACACAT 60.738 43.478 0.00 0.00 0.00 3.21
3321 5594 2.416566 GCACACAATCAACACCAACACA 60.417 45.455 0.00 0.00 0.00 3.72
3322 5595 2.192624 GCACACAATCAACACCAACAC 58.807 47.619 0.00 0.00 0.00 3.32
3323 5596 1.821136 TGCACACAATCAACACCAACA 59.179 42.857 0.00 0.00 0.00 3.33
3324 5597 2.575694 TGCACACAATCAACACCAAC 57.424 45.000 0.00 0.00 0.00 3.77
3325 5598 2.957680 AGATGCACACAATCAACACCAA 59.042 40.909 0.00 0.00 0.00 3.67
3326 5599 2.585330 AGATGCACACAATCAACACCA 58.415 42.857 0.00 0.00 0.00 4.17
3327 5600 3.648339 AAGATGCACACAATCAACACC 57.352 42.857 0.00 0.00 0.00 4.16
3328 5601 5.626543 CAGTTAAGATGCACACAATCAACAC 59.373 40.000 0.00 0.00 0.00 3.32
3329 5602 5.299028 ACAGTTAAGATGCACACAATCAACA 59.701 36.000 0.00 0.00 0.00 3.33
3330 5603 5.626543 CACAGTTAAGATGCACACAATCAAC 59.373 40.000 0.00 0.00 0.00 3.18
3331 5604 5.299028 ACACAGTTAAGATGCACACAATCAA 59.701 36.000 0.00 0.00 0.00 2.57
3332 5605 4.821260 ACACAGTTAAGATGCACACAATCA 59.179 37.500 0.00 0.00 0.00 2.57
3333 5606 5.362556 ACACAGTTAAGATGCACACAATC 57.637 39.130 0.00 0.00 0.00 2.67
3334 5607 6.230472 TCTACACAGTTAAGATGCACACAAT 58.770 36.000 0.00 0.00 0.00 2.71
3335 5608 5.606505 TCTACACAGTTAAGATGCACACAA 58.393 37.500 0.00 0.00 0.00 3.33
3336 5609 5.208463 TCTACACAGTTAAGATGCACACA 57.792 39.130 0.00 0.00 0.00 3.72
3337 5610 4.627467 CCTCTACACAGTTAAGATGCACAC 59.373 45.833 0.00 0.00 0.00 3.82
3338 5611 4.820897 CCTCTACACAGTTAAGATGCACA 58.179 43.478 0.00 0.00 0.00 4.57
3339 5612 3.619038 GCCTCTACACAGTTAAGATGCAC 59.381 47.826 0.00 0.00 32.95 4.57
3340 5613 3.369471 GGCCTCTACACAGTTAAGATGCA 60.369 47.826 0.00 0.00 33.95 3.96
3341 5614 3.198872 GGCCTCTACACAGTTAAGATGC 58.801 50.000 0.00 2.20 32.22 3.91
3342 5615 3.448686 CGGCCTCTACACAGTTAAGATG 58.551 50.000 0.00 0.00 0.00 2.90
3343 5616 2.431057 CCGGCCTCTACACAGTTAAGAT 59.569 50.000 0.00 0.00 0.00 2.40
3344 5617 1.822990 CCGGCCTCTACACAGTTAAGA 59.177 52.381 0.00 0.00 0.00 2.10
3345 5618 1.134788 CCCGGCCTCTACACAGTTAAG 60.135 57.143 0.00 0.00 0.00 1.85
3346 5619 0.899720 CCCGGCCTCTACACAGTTAA 59.100 55.000 0.00 0.00 0.00 2.01
3347 5620 0.251922 ACCCGGCCTCTACACAGTTA 60.252 55.000 0.00 0.00 0.00 2.24
3348 5621 1.535687 ACCCGGCCTCTACACAGTT 60.536 57.895 0.00 0.00 0.00 3.16
3349 5622 2.119832 ACCCGGCCTCTACACAGT 59.880 61.111 0.00 0.00 0.00 3.55
3350 5623 2.283529 ACACCCGGCCTCTACACAG 61.284 63.158 0.00 0.00 0.00 3.66
3351 5624 2.203728 ACACCCGGCCTCTACACA 60.204 61.111 0.00 0.00 0.00 3.72
3352 5625 2.264794 CACACCCGGCCTCTACAC 59.735 66.667 0.00 0.00 0.00 2.90
3353 5626 2.203728 ACACACCCGGCCTCTACA 60.204 61.111 0.00 0.00 0.00 2.74
3354 5627 2.264794 CACACACCCGGCCTCTAC 59.735 66.667 0.00 0.00 0.00 2.59
3355 5628 3.702048 GCACACACCCGGCCTCTA 61.702 66.667 0.00 0.00 0.00 2.43
3357 5630 3.248446 TAAGCACACACCCGGCCTC 62.248 63.158 0.00 0.00 0.00 4.70
3358 5631 3.246112 TAAGCACACACCCGGCCT 61.246 61.111 0.00 0.00 0.00 5.19
3359 5632 2.746277 CTAAGCACACACCCGGCC 60.746 66.667 0.00 0.00 0.00 6.13
3360 5633 2.032071 ACTAAGCACACACCCGGC 59.968 61.111 0.00 0.00 0.00 6.13
3361 5634 1.070786 ACACTAAGCACACACCCGG 59.929 57.895 0.00 0.00 0.00 5.73
3362 5635 0.531974 ACACACTAAGCACACACCCG 60.532 55.000 0.00 0.00 0.00 5.28
3363 5636 1.675552 AACACACTAAGCACACACCC 58.324 50.000 0.00 0.00 0.00 4.61
3364 5637 2.422127 ACAAACACACTAAGCACACACC 59.578 45.455 0.00 0.00 0.00 4.16
3365 5638 3.757745 ACAAACACACTAAGCACACAC 57.242 42.857 0.00 0.00 0.00 3.82
3366 5639 5.364778 AGATACAAACACACTAAGCACACA 58.635 37.500 0.00 0.00 0.00 3.72
3367 5640 5.924475 AGATACAAACACACTAAGCACAC 57.076 39.130 0.00 0.00 0.00 3.82
3368 5641 6.755206 AGTAGATACAAACACACTAAGCACA 58.245 36.000 0.00 0.00 0.00 4.57
3369 5642 7.384115 TCAAGTAGATACAAACACACTAAGCAC 59.616 37.037 0.00 0.00 0.00 4.40
3370 5643 7.438564 TCAAGTAGATACAAACACACTAAGCA 58.561 34.615 0.00 0.00 0.00 3.91
3371 5644 7.884816 TCAAGTAGATACAAACACACTAAGC 57.115 36.000 0.00 0.00 0.00 3.09
3372 5645 8.436200 GCTTCAAGTAGATACAAACACACTAAG 58.564 37.037 0.00 0.00 0.00 2.18
3373 5646 8.148351 AGCTTCAAGTAGATACAAACACACTAA 58.852 33.333 0.00 0.00 0.00 2.24
3374 5647 7.667557 AGCTTCAAGTAGATACAAACACACTA 58.332 34.615 0.00 0.00 0.00 2.74
3375 5648 6.525629 AGCTTCAAGTAGATACAAACACACT 58.474 36.000 0.00 0.00 0.00 3.55
3376 5649 6.787085 AGCTTCAAGTAGATACAAACACAC 57.213 37.500 0.00 0.00 0.00 3.82
3377 5650 6.989759 TGAAGCTTCAAGTAGATACAAACACA 59.010 34.615 26.61 0.00 33.55 3.72
3378 5651 7.421530 TGAAGCTTCAAGTAGATACAAACAC 57.578 36.000 26.61 0.00 33.55 3.32
3379 5652 8.621532 AATGAAGCTTCAAGTAGATACAAACA 57.378 30.769 31.55 4.53 41.13 2.83
3380 5653 9.899226 AAAATGAAGCTTCAAGTAGATACAAAC 57.101 29.630 31.55 0.00 41.13 2.93
3382 5655 9.283768 TGAAAATGAAGCTTCAAGTAGATACAA 57.716 29.630 31.55 5.20 41.13 2.41
3383 5656 8.846943 TGAAAATGAAGCTTCAAGTAGATACA 57.153 30.769 31.55 19.01 41.13 2.29
3384 5657 8.940952 ACTGAAAATGAAGCTTCAAGTAGATAC 58.059 33.333 31.55 17.05 41.13 2.24
3385 5658 9.155975 GACTGAAAATGAAGCTTCAAGTAGATA 57.844 33.333 31.55 14.25 41.13 1.98
3386 5659 7.663081 TGACTGAAAATGAAGCTTCAAGTAGAT 59.337 33.333 31.55 12.57 41.13 1.98
3387 5660 6.992123 TGACTGAAAATGAAGCTTCAAGTAGA 59.008 34.615 31.55 16.42 41.13 2.59
3388 5661 7.194607 TGACTGAAAATGAAGCTTCAAGTAG 57.805 36.000 31.55 24.03 41.13 2.57
3389 5662 7.566760 TTGACTGAAAATGAAGCTTCAAGTA 57.433 32.000 31.55 13.57 41.13 2.24
3390 5663 6.455360 TTGACTGAAAATGAAGCTTCAAGT 57.545 33.333 31.55 27.35 41.13 3.16
3391 5664 9.467258 TTTATTGACTGAAAATGAAGCTTCAAG 57.533 29.630 31.55 24.56 41.13 3.02
3392 5665 9.814899 TTTTATTGACTGAAAATGAAGCTTCAA 57.185 25.926 31.55 14.81 41.13 2.69
3393 5666 9.985730 ATTTTATTGACTGAAAATGAAGCTTCA 57.014 25.926 30.23 30.23 42.14 3.02
3395 5668 9.428097 GGATTTTATTGACTGAAAATGAAGCTT 57.572 29.630 0.00 0.00 35.82 3.74
3396 5669 8.587608 TGGATTTTATTGACTGAAAATGAAGCT 58.412 29.630 0.00 0.00 35.82 3.74
3397 5670 8.761575 TGGATTTTATTGACTGAAAATGAAGC 57.238 30.769 0.00 0.00 35.82 3.86
3405 5678 9.859427 GACAAATGATGGATTTTATTGACTGAA 57.141 29.630 0.00 0.00 31.41 3.02
3406 5679 9.022884 TGACAAATGATGGATTTTATTGACTGA 57.977 29.630 0.00 0.00 31.41 3.41
3407 5680 9.642327 TTGACAAATGATGGATTTTATTGACTG 57.358 29.630 0.00 0.00 31.41 3.51
3434 5707 9.397280 AGTTCTCTGCTAAAGTTAGTTCTTTTT 57.603 29.630 0.32 0.00 38.40 1.94
3435 5708 8.831550 CAGTTCTCTGCTAAAGTTAGTTCTTTT 58.168 33.333 0.32 0.00 35.88 2.27
3436 5709 8.371770 CAGTTCTCTGCTAAAGTTAGTTCTTT 57.628 34.615 0.32 0.00 36.95 2.52
3437 5710 7.954788 CAGTTCTCTGCTAAAGTTAGTTCTT 57.045 36.000 0.32 0.00 34.79 2.52
3452 5725 1.674221 GGTGGCACTAGCAGTTCTCTG 60.674 57.143 18.45 0.00 44.61 3.35
3453 5726 0.610687 GGTGGCACTAGCAGTTCTCT 59.389 55.000 18.45 0.00 44.61 3.10
3454 5727 0.391793 GGGTGGCACTAGCAGTTCTC 60.392 60.000 18.45 0.00 44.61 2.87
3455 5728 0.838122 AGGGTGGCACTAGCAGTTCT 60.838 55.000 18.45 0.31 44.61 3.01
3456 5729 0.674895 CAGGGTGGCACTAGCAGTTC 60.675 60.000 18.45 0.00 44.61 3.01
3457 5730 1.127567 TCAGGGTGGCACTAGCAGTT 61.128 55.000 18.45 0.00 44.61 3.16
3458 5731 0.911525 ATCAGGGTGGCACTAGCAGT 60.912 55.000 18.45 0.00 44.61 4.40
3459 5732 0.463295 CATCAGGGTGGCACTAGCAG 60.463 60.000 18.45 3.85 44.61 4.24
3460 5733 1.200760 ACATCAGGGTGGCACTAGCA 61.201 55.000 18.45 0.00 44.61 3.49
3461 5734 0.745845 CACATCAGGGTGGCACTAGC 60.746 60.000 18.45 0.11 41.10 3.42
3462 5735 0.745845 GCACATCAGGGTGGCACTAG 60.746 60.000 18.45 7.82 39.19 2.57
3463 5736 1.299648 GCACATCAGGGTGGCACTA 59.700 57.895 18.45 1.26 39.19 2.74
3464 5737 2.034687 GCACATCAGGGTGGCACT 59.965 61.111 18.45 0.00 39.19 4.40
3465 5738 2.282391 TGCACATCAGGGTGGCAC 60.282 61.111 9.70 9.70 39.19 5.01
3466 5739 2.034532 CTGCACATCAGGGTGGCA 59.965 61.111 0.00 0.00 39.15 4.92
3467 5740 3.446570 GCTGCACATCAGGGTGGC 61.447 66.667 0.00 0.00 43.06 5.01
3468 5741 2.034532 TGCTGCACATCAGGGTGG 59.965 61.111 0.00 0.00 43.06 4.61
3469 5742 0.607217 TTCTGCTGCACATCAGGGTG 60.607 55.000 0.00 0.00 43.06 4.61
3470 5743 0.607489 GTTCTGCTGCACATCAGGGT 60.607 55.000 0.00 0.00 43.06 4.34
3471 5744 1.310933 GGTTCTGCTGCACATCAGGG 61.311 60.000 0.00 0.00 43.06 4.45
3472 5745 1.642037 CGGTTCTGCTGCACATCAGG 61.642 60.000 0.00 0.00 43.06 3.86
3473 5746 1.642037 CCGGTTCTGCTGCACATCAG 61.642 60.000 0.00 0.00 45.62 2.90
3474 5747 1.672030 CCGGTTCTGCTGCACATCA 60.672 57.895 0.00 0.00 0.00 3.07
3475 5748 3.044059 GCCGGTTCTGCTGCACATC 62.044 63.158 1.90 0.00 0.00 3.06
3476 5749 3.058160 GCCGGTTCTGCTGCACAT 61.058 61.111 1.90 0.00 0.00 3.21
3495 5768 3.568686 TTTTTGGTCCGATCGCCG 58.431 55.556 10.32 0.00 38.18 6.46
3510 5783 2.021457 CGGTCACTGGTTCTGGTTTTT 58.979 47.619 0.00 0.00 0.00 1.94
3511 5784 1.675552 CGGTCACTGGTTCTGGTTTT 58.324 50.000 0.00 0.00 0.00 2.43
3512 5785 0.818040 GCGGTCACTGGTTCTGGTTT 60.818 55.000 0.00 0.00 0.00 3.27
3513 5786 1.227853 GCGGTCACTGGTTCTGGTT 60.228 57.895 0.00 0.00 0.00 3.67
3514 5787 2.426023 GCGGTCACTGGTTCTGGT 59.574 61.111 0.00 0.00 0.00 4.00
3515 5788 2.738521 CGCGGTCACTGGTTCTGG 60.739 66.667 0.00 0.00 0.00 3.86
3516 5789 2.738521 CCGCGGTCACTGGTTCTG 60.739 66.667 19.50 0.00 0.00 3.02
3517 5790 4.681978 GCCGCGGTCACTGGTTCT 62.682 66.667 28.70 0.00 0.00 3.01
3529 5802 2.097728 GCTTAAAGAACCGCCGCG 59.902 61.111 5.59 5.59 0.00 6.46
3530 5803 1.583495 AAGGCTTAAAGAACCGCCGC 61.583 55.000 0.00 0.00 46.85 6.53
3531 5804 0.168128 CAAGGCTTAAAGAACCGCCG 59.832 55.000 0.00 0.00 46.85 6.46
3532 5805 0.109272 GCAAGGCTTAAAGAACCGCC 60.109 55.000 0.00 0.00 42.79 6.13
3533 5806 0.596082 TGCAAGGCTTAAAGAACCGC 59.404 50.000 0.00 0.00 0.00 5.68
3534 5807 2.095718 GTCTGCAAGGCTTAAAGAACCG 60.096 50.000 11.42 0.00 34.11 4.44
3535 5808 2.229062 GGTCTGCAAGGCTTAAAGAACC 59.771 50.000 13.00 11.84 39.67 3.62
3536 5809 3.149981 AGGTCTGCAAGGCTTAAAGAAC 58.850 45.455 15.23 15.23 39.67 3.01
3537 5810 3.508845 AGGTCTGCAAGGCTTAAAGAA 57.491 42.857 11.42 0.00 39.67 2.52
3538 5811 3.508845 AAGGTCTGCAAGGCTTAAAGA 57.491 42.857 0.00 3.00 39.67 2.52
3539 5812 3.365364 CGAAAGGTCTGCAAGGCTTAAAG 60.365 47.826 0.00 0.26 39.67 1.85
3540 5813 2.552315 CGAAAGGTCTGCAAGGCTTAAA 59.448 45.455 0.00 0.00 39.67 1.52
3541 5814 2.151202 CGAAAGGTCTGCAAGGCTTAA 58.849 47.619 0.00 0.00 39.67 1.85
3542 5815 1.346395 TCGAAAGGTCTGCAAGGCTTA 59.654 47.619 0.00 0.00 39.67 3.09
3543 5816 0.108585 TCGAAAGGTCTGCAAGGCTT 59.891 50.000 0.00 0.00 39.67 4.35
3544 5817 0.321122 CTCGAAAGGTCTGCAAGGCT 60.321 55.000 0.00 0.00 39.67 4.58
3545 5818 1.916697 GCTCGAAAGGTCTGCAAGGC 61.917 60.000 0.00 0.00 38.34 4.35
3546 5819 0.603707 TGCTCGAAAGGTCTGCAAGG 60.604 55.000 0.00 0.00 31.11 3.61
3547 5820 1.229428 TTGCTCGAAAGGTCTGCAAG 58.771 50.000 2.25 0.00 36.57 4.01
3548 5821 1.806542 GATTGCTCGAAAGGTCTGCAA 59.193 47.619 8.21 8.21 41.61 4.08
3549 5822 1.442769 GATTGCTCGAAAGGTCTGCA 58.557 50.000 0.00 0.00 31.82 4.41
3550 5823 0.729690 GGATTGCTCGAAAGGTCTGC 59.270 55.000 0.00 0.00 0.00 4.26
3551 5824 2.099141 TGGATTGCTCGAAAGGTCTG 57.901 50.000 0.00 0.00 0.00 3.51
3552 5825 2.420687 GGATGGATTGCTCGAAAGGTCT 60.421 50.000 0.00 0.00 0.00 3.85
3553 5826 1.943340 GGATGGATTGCTCGAAAGGTC 59.057 52.381 0.00 0.00 0.00 3.85
3554 5827 1.743772 CGGATGGATTGCTCGAAAGGT 60.744 52.381 0.00 0.00 0.00 3.50
3555 5828 0.940126 CGGATGGATTGCTCGAAAGG 59.060 55.000 0.00 0.00 0.00 3.11
3556 5829 0.940126 CCGGATGGATTGCTCGAAAG 59.060 55.000 0.00 0.00 37.49 2.62
3557 5830 0.539518 TCCGGATGGATTGCTCGAAA 59.460 50.000 0.00 0.00 40.17 3.46
3558 5831 0.539518 TTCCGGATGGATTGCTCGAA 59.460 50.000 4.15 0.00 45.91 3.71
3559 5832 0.539518 TTTCCGGATGGATTGCTCGA 59.460 50.000 4.15 0.00 45.91 4.04
3560 5833 1.378531 TTTTCCGGATGGATTGCTCG 58.621 50.000 4.15 0.00 45.91 5.03
3561 5834 2.755103 ACTTTTTCCGGATGGATTGCTC 59.245 45.455 4.15 0.00 45.91 4.26
3562 5835 2.755103 GACTTTTTCCGGATGGATTGCT 59.245 45.455 4.15 0.00 45.91 3.91
3563 5836 2.477863 CGACTTTTTCCGGATGGATTGC 60.478 50.000 4.15 0.00 45.91 3.56
3564 5837 3.405170 CGACTTTTTCCGGATGGATTG 57.595 47.619 4.15 0.00 45.91 2.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.