Multiple sequence alignment - TraesCS3B01G054200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G054200 chr3B 100.000 3136 0 0 1 3136 27993027 27996162 0.000000e+00 5792.0
1 TraesCS3B01G054200 chr3B 90.973 1717 75 37 767 2429 12182005 12180315 0.000000e+00 2239.0
2 TraesCS3B01G054200 chr3B 95.391 781 27 5 1 773 27999598 27998819 0.000000e+00 1234.0
3 TraesCS3B01G054200 chr3B 86.548 788 72 13 1376 2147 14065530 14064761 0.000000e+00 837.0
4 TraesCS3B01G054200 chr3B 92.015 526 36 6 2614 3136 12180038 12179516 0.000000e+00 734.0
5 TraesCS3B01G054200 chr3B 94.815 405 18 1 1739 2143 12174276 12173875 2.050000e-176 628.0
6 TraesCS3B01G054200 chr3B 82.885 707 103 11 1411 2113 50021212 50021904 1.240000e-173 619.0
7 TraesCS3B01G054200 chr3B 87.557 442 33 9 1 421 12174354 12174794 2.810000e-135 492.0
8 TraesCS3B01G054200 chr3B 85.000 280 23 14 85 346 12287197 12286919 1.850000e-67 267.0
9 TraesCS3B01G054200 chr3B 92.941 170 9 2 401 570 499167637 499167803 8.690000e-61 244.0
10 TraesCS3B01G054200 chr3B 81.646 316 35 14 970 1274 12401300 12400997 1.120000e-59 241.0
11 TraesCS3B01G054200 chr3B 81.646 316 35 14 970 1274 28082524 28082221 1.120000e-59 241.0
12 TraesCS3B01G054200 chr3B 88.830 188 15 5 402 588 123027162 123027344 3.150000e-55 226.0
13 TraesCS3B01G054200 chr3B 79.487 312 27 19 969 1274 14065887 14065607 1.490000e-43 187.0
14 TraesCS3B01G054200 chr3B 78.981 314 29 19 969 1276 28492555 28492273 2.480000e-41 180.0
15 TraesCS3B01G054200 chr3B 83.721 172 23 4 2267 2438 14104653 14104487 1.160000e-34 158.0
16 TraesCS3B01G054200 chr3B 83.051 177 24 5 2263 2438 28540402 28540231 4.190000e-34 156.0
17 TraesCS3B01G054200 chr3B 82.558 172 23 4 2267 2438 14064667 14064503 9.060000e-31 145.0
18 TraesCS3B01G054200 chr3B 82.787 122 16 5 3016 3136 14107121 14107004 1.540000e-18 104.0
19 TraesCS3B01G054200 chr3B 100.000 45 0 0 2569 2613 12180105 12180061 2.000000e-12 84.2
20 TraesCS3B01G054200 chr3B 90.164 61 6 0 2457 2517 14222070 14222010 2.590000e-11 80.5
21 TraesCS3B01G054200 chrUn 93.162 1477 57 23 972 2429 35795027 35796478 0.000000e+00 2128.0
22 TraesCS3B01G054200 chrUn 89.550 1646 85 44 767 2394 35203010 35204586 0.000000e+00 2006.0
23 TraesCS3B01G054200 chrUn 86.438 671 39 15 2513 3136 35796606 35797271 0.000000e+00 688.0
24 TraesCS3B01G054200 chrUn 93.237 414 20 4 2722 3134 35204620 35205026 1.240000e-168 603.0
25 TraesCS3B01G054200 chrUn 92.566 417 26 2 1739 2152 305025109 305025523 7.490000e-166 593.0
26 TraesCS3B01G054200 chrUn 92.010 388 16 8 2047 2429 35209512 35209889 5.960000e-147 531.0
27 TraesCS3B01G054200 chrUn 85.681 426 37 13 1 403 305025013 305024589 8.040000e-116 427.0
28 TraesCS3B01G054200 chrUn 86.232 414 30 18 767 1171 236914312 236913917 1.040000e-114 424.0
29 TraesCS3B01G054200 chrUn 88.938 226 15 6 2204 2429 305025546 305025761 1.430000e-68 270.0
30 TraesCS3B01G054200 chrUn 82.051 312 21 16 104 403 229835932 229836220 1.880000e-57 233.0
31 TraesCS3B01G054200 chr3D 90.044 1577 72 32 888 2438 5681499 5679982 0.000000e+00 1964.0
32 TraesCS3B01G054200 chr3D 83.162 1170 112 33 970 2122 9948485 9947384 0.000000e+00 990.0
33 TraesCS3B01G054200 chr3D 87.786 786 67 9 1376 2145 9881610 9880838 0.000000e+00 893.0
34 TraesCS3B01G054200 chr3D 87.798 336 17 6 2614 2927 5679682 5679349 3.820000e-99 372.0
35 TraesCS3B01G054200 chr3D 81.905 315 25 14 970 1283 9881951 9881668 1.450000e-58 237.0
36 TraesCS3B01G054200 chr3D 89.444 180 14 4 393 571 478643938 478644113 4.070000e-54 222.0
37 TraesCS3B01G054200 chr3D 85.561 187 12 7 2257 2438 5677411 5677235 6.910000e-42 182.0
38 TraesCS3B01G054200 chr3D 81.858 226 23 7 2918 3136 5678923 5678709 1.160000e-39 174.0
39 TraesCS3B01G054200 chr3D 89.423 104 2 4 308 402 5673725 5673828 4.250000e-24 122.0
40 TraesCS3B01G054200 chr3D 90.323 93 7 1 2439 2531 5679897 5679807 1.530000e-23 121.0
41 TraesCS3B01G054200 chr3D 93.151 73 5 0 2497 2569 9946983 9946911 1.190000e-19 108.0
42 TraesCS3B01G054200 chr3D 97.778 45 0 1 2569 2613 5679753 5679710 3.350000e-10 76.8
43 TraesCS3B01G054200 chr3D 100.000 31 0 0 856 886 5681521 5681491 1.210000e-04 58.4
44 TraesCS3B01G054200 chr3A 90.064 1087 69 17 1379 2438 15603988 15605062 0.000000e+00 1373.0
45 TraesCS3B01G054200 chr3A 83.962 636 55 16 2535 3136 15605177 15605799 1.630000e-157 566.0
46 TraesCS3B01G054200 chr3A 89.014 355 22 7 921 1275 15603592 15603929 1.040000e-114 424.0
47 TraesCS3B01G054200 chr3A 88.214 280 20 7 3 269 15608709 15608430 3.900000e-84 322.0
48 TraesCS3B01G054200 chr3A 90.385 104 8 2 614 716 158355381 158355483 5.460000e-28 135.0
49 TraesCS3B01G054200 chr7D 94.118 170 6 3 401 570 114469745 114469910 4.010000e-64 255.0
50 TraesCS3B01G054200 chr6B 91.209 182 13 2 395 576 639991663 639991485 8.690000e-61 244.0
51 TraesCS3B01G054200 chr4B 89.529 191 16 3 402 592 567001872 567001686 4.040000e-59 239.0
52 TraesCS3B01G054200 chr5B 91.429 175 11 3 399 573 187351570 187351740 1.450000e-58 237.0
53 TraesCS3B01G054200 chr2B 91.429 175 12 2 399 573 480250513 480250684 1.450000e-58 237.0
54 TraesCS3B01G054200 chr2B 87.234 188 19 4 384 569 134045727 134045911 3.170000e-50 209.0
55 TraesCS3B01G054200 chr1A 91.429 175 12 2 399 573 253523870 253524041 1.450000e-58 237.0
56 TraesCS3B01G054200 chr1A 85.354 198 20 7 380 575 570788745 570788935 2.470000e-46 196.0
57 TraesCS3B01G054200 chr1A 97.619 84 2 0 628 711 584944966 584945049 9.060000e-31 145.0
58 TraesCS3B01G054200 chr1A 97.619 84 1 1 628 711 584886965 584886883 3.260000e-30 143.0
59 TraesCS3B01G054200 chr7B 90.556 180 13 4 397 576 394202552 394202377 5.230000e-58 235.0
60 TraesCS3B01G054200 chr7B 97.674 86 1 1 627 711 150025371 150025286 2.520000e-31 147.0
61 TraesCS3B01G054200 chr2D 90.449 178 14 2 392 569 629245614 629245788 6.760000e-57 231.0
62 TraesCS3B01G054200 chr2D 89.011 182 16 4 390 569 517195818 517195997 4.070000e-54 222.0
63 TraesCS3B01G054200 chr2D 89.286 168 14 4 391 557 476332269 476332105 1.140000e-49 207.0
64 TraesCS3B01G054200 chr5A 86.842 190 20 5 380 569 136393187 136393003 1.140000e-49 207.0
65 TraesCS3B01G054200 chr7A 85.106 188 25 3 390 577 581999229 581999413 4.130000e-44 189.0
66 TraesCS3B01G054200 chr1D 97.647 85 2 0 627 711 415985006 415984922 2.520000e-31 147.0
67 TraesCS3B01G054200 chr6D 97.647 85 1 1 628 711 461515218 461515302 9.060000e-31 145.0
68 TraesCS3B01G054200 chr6A 97.647 85 1 1 628 711 23593230 23593314 9.060000e-31 145.0
69 TraesCS3B01G054200 chr2A 94.565 92 3 2 622 713 719302354 719302265 1.170000e-29 141.0
70 TraesCS3B01G054200 chr2A 92.754 69 5 0 2501 2569 19661818 19661750 1.990000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G054200 chr3B 27993027 27996162 3135 False 5792.000000 5792 100.000000 1 3136 1 chr3B.!!$F2 3135
1 TraesCS3B01G054200 chr3B 27998819 27999598 779 True 1234.000000 1234 95.391000 1 773 1 chr3B.!!$R5 772
2 TraesCS3B01G054200 chr3B 12179516 12182005 2489 True 1019.066667 2239 94.329333 767 3136 3 chr3B.!!$R9 2369
3 TraesCS3B01G054200 chr3B 50021212 50021904 692 False 619.000000 619 82.885000 1411 2113 1 chr3B.!!$F3 702
4 TraesCS3B01G054200 chr3B 14064503 14065887 1384 True 389.666667 837 82.864333 969 2438 3 chr3B.!!$R10 1469
5 TraesCS3B01G054200 chrUn 35795027 35797271 2244 False 1408.000000 2128 89.800000 972 3136 2 chrUn.!!$F4 2164
6 TraesCS3B01G054200 chrUn 35203010 35205026 2016 False 1304.500000 2006 91.393500 767 3134 2 chrUn.!!$F3 2367
7 TraesCS3B01G054200 chrUn 305025109 305025761 652 False 431.500000 593 90.752000 1739 2429 2 chrUn.!!$F5 690
8 TraesCS3B01G054200 chr3D 9880838 9881951 1113 True 565.000000 893 84.845500 970 2145 2 chr3D.!!$R2 1175
9 TraesCS3B01G054200 chr3D 9946911 9948485 1574 True 549.000000 990 88.156500 970 2569 2 chr3D.!!$R3 1599
10 TraesCS3B01G054200 chr3D 5677235 5681521 4286 True 421.171429 1964 90.480286 856 3136 7 chr3D.!!$R1 2280
11 TraesCS3B01G054200 chr3A 15603592 15605799 2207 False 787.666667 1373 87.680000 921 3136 3 chr3A.!!$F2 2215

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
616 620 0.033366 CCCATGTCTCACACGTCACA 59.967 55.0 0.0 0.0 0.0 3.58 F
730 734 0.179029 ACTGGGTAAAGCTGCGTGTT 60.179 50.0 0.0 0.0 0.0 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1892 1978 0.883833 GGTTGACCCACATCTTGCAG 59.116 55.000 0.00 0.0 0.0 4.41 R
2685 3195 1.486726 CTTGGCCTCCGGAACTTCTAT 59.513 52.381 5.23 0.0 0.0 1.98 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 5.280215 CCCTCCATACTAAATGAGGCCTAAG 60.280 48.000 4.42 0.66 0.00 2.18
219 223 5.163519 ACACATGGCAGAAAAATATAGCACC 60.164 40.000 0.00 0.00 0.00 5.01
229 233 6.712547 AGAAAAATATAGCACCAGGTAGATGC 59.287 38.462 0.00 0.00 39.74 3.91
234 238 2.118679 AGCACCAGGTAGATGCATGTA 58.881 47.619 2.46 0.01 41.97 2.29
235 239 2.505407 AGCACCAGGTAGATGCATGTAA 59.495 45.455 2.46 0.00 41.97 2.41
236 240 2.874701 GCACCAGGTAGATGCATGTAAG 59.125 50.000 2.46 0.00 39.23 2.34
237 241 3.682718 GCACCAGGTAGATGCATGTAAGT 60.683 47.826 2.46 0.00 39.23 2.24
238 242 4.517285 CACCAGGTAGATGCATGTAAGTT 58.483 43.478 2.46 0.00 0.00 2.66
239 243 4.333649 CACCAGGTAGATGCATGTAAGTTG 59.666 45.833 2.46 3.85 0.00 3.16
240 244 4.019321 ACCAGGTAGATGCATGTAAGTTGT 60.019 41.667 2.46 0.00 0.00 3.32
241 245 4.943705 CCAGGTAGATGCATGTAAGTTGTT 59.056 41.667 2.46 0.00 0.00 2.83
242 246 5.163723 CCAGGTAGATGCATGTAAGTTGTTG 60.164 44.000 2.46 0.00 0.00 3.33
243 247 5.643348 CAGGTAGATGCATGTAAGTTGTTGA 59.357 40.000 2.46 0.00 0.00 3.18
244 248 6.149308 CAGGTAGATGCATGTAAGTTGTTGAA 59.851 38.462 2.46 0.00 0.00 2.69
245 249 6.714810 AGGTAGATGCATGTAAGTTGTTGAAA 59.285 34.615 2.46 0.00 0.00 2.69
246 250 7.023575 GGTAGATGCATGTAAGTTGTTGAAAG 58.976 38.462 2.46 0.00 0.00 2.62
247 251 6.882610 AGATGCATGTAAGTTGTTGAAAGA 57.117 33.333 2.46 0.00 0.00 2.52
248 252 7.275888 AGATGCATGTAAGTTGTTGAAAGAA 57.724 32.000 2.46 0.00 0.00 2.52
249 253 7.365741 AGATGCATGTAAGTTGTTGAAAGAAG 58.634 34.615 2.46 0.00 0.00 2.85
250 254 5.280945 TGCATGTAAGTTGTTGAAAGAAGC 58.719 37.500 0.00 0.00 0.00 3.86
251 255 5.067674 TGCATGTAAGTTGTTGAAAGAAGCT 59.932 36.000 0.00 0.00 0.00 3.74
252 256 5.400485 GCATGTAAGTTGTTGAAAGAAGCTG 59.600 40.000 0.00 0.00 0.00 4.24
253 257 6.728200 CATGTAAGTTGTTGAAAGAAGCTGA 58.272 36.000 0.00 0.00 0.00 4.26
254 258 6.942532 TGTAAGTTGTTGAAAGAAGCTGAT 57.057 33.333 0.00 0.00 0.00 2.90
255 259 6.728200 TGTAAGTTGTTGAAAGAAGCTGATG 58.272 36.000 0.00 0.00 0.00 3.07
256 260 4.843220 AGTTGTTGAAAGAAGCTGATGG 57.157 40.909 0.00 0.00 0.00 3.51
257 261 4.210331 AGTTGTTGAAAGAAGCTGATGGT 58.790 39.130 0.00 0.00 0.00 3.55
258 262 5.376625 AGTTGTTGAAAGAAGCTGATGGTA 58.623 37.500 0.00 0.00 0.00 3.25
259 263 5.827797 AGTTGTTGAAAGAAGCTGATGGTAA 59.172 36.000 0.00 0.00 0.00 2.85
260 264 6.491403 AGTTGTTGAAAGAAGCTGATGGTAAT 59.509 34.615 0.00 0.00 0.00 1.89
261 265 6.258230 TGTTGAAAGAAGCTGATGGTAATG 57.742 37.500 0.00 0.00 0.00 1.90
262 266 5.183713 TGTTGAAAGAAGCTGATGGTAATGG 59.816 40.000 0.00 0.00 0.00 3.16
263 267 5.178096 TGAAAGAAGCTGATGGTAATGGA 57.822 39.130 0.00 0.00 0.00 3.41
264 268 5.188434 TGAAAGAAGCTGATGGTAATGGAG 58.812 41.667 0.00 0.00 0.00 3.86
265 269 4.851639 AAGAAGCTGATGGTAATGGAGT 57.148 40.909 0.00 0.00 0.00 3.85
266 270 5.957771 AAGAAGCTGATGGTAATGGAGTA 57.042 39.130 0.00 0.00 0.00 2.59
267 271 5.283457 AGAAGCTGATGGTAATGGAGTAC 57.717 43.478 0.00 0.00 0.00 2.73
268 272 4.716784 AGAAGCTGATGGTAATGGAGTACA 59.283 41.667 0.00 0.00 0.00 2.90
269 273 5.189736 AGAAGCTGATGGTAATGGAGTACAA 59.810 40.000 0.00 0.00 0.00 2.41
270 274 5.028549 AGCTGATGGTAATGGAGTACAAG 57.971 43.478 0.00 0.00 0.00 3.16
271 275 3.561725 GCTGATGGTAATGGAGTACAAGC 59.438 47.826 0.00 0.00 0.00 4.01
272 276 4.769688 CTGATGGTAATGGAGTACAAGCA 58.230 43.478 0.00 0.00 0.00 3.91
273 277 5.371526 CTGATGGTAATGGAGTACAAGCAT 58.628 41.667 0.00 0.00 0.00 3.79
274 278 5.125356 TGATGGTAATGGAGTACAAGCATG 58.875 41.667 0.00 0.00 0.00 4.06
275 279 3.278574 TGGTAATGGAGTACAAGCATGC 58.721 45.455 10.51 10.51 0.00 4.06
276 280 3.054434 TGGTAATGGAGTACAAGCATGCT 60.054 43.478 16.30 16.30 0.00 3.79
277 281 3.947834 GGTAATGGAGTACAAGCATGCTT 59.052 43.478 27.21 27.21 36.60 3.91
291 295 6.726490 AAGCATGCTTGATATTTTCCTCAT 57.274 33.333 31.49 1.47 34.60 2.90
292 296 6.085555 AGCATGCTTGATATTTTCCTCATG 57.914 37.500 16.30 0.00 34.76 3.07
293 297 5.831525 AGCATGCTTGATATTTTCCTCATGA 59.168 36.000 16.30 0.00 33.82 3.07
294 298 6.016192 AGCATGCTTGATATTTTCCTCATGAG 60.016 38.462 16.30 16.24 33.82 2.90
295 299 5.762825 TGCTTGATATTTTCCTCATGAGC 57.237 39.130 17.76 2.51 0.00 4.26
296 300 5.195185 TGCTTGATATTTTCCTCATGAGCA 58.805 37.500 17.76 0.00 34.51 4.26
297 301 5.653330 TGCTTGATATTTTCCTCATGAGCAA 59.347 36.000 17.76 6.01 34.17 3.91
298 302 5.975939 GCTTGATATTTTCCTCATGAGCAAC 59.024 40.000 17.76 0.00 29.62 4.17
299 303 6.405065 GCTTGATATTTTCCTCATGAGCAACA 60.405 38.462 17.76 1.93 29.62 3.33
300 304 7.465353 TTGATATTTTCCTCATGAGCAACAA 57.535 32.000 17.76 6.26 0.00 2.83
301 305 7.465353 TGATATTTTCCTCATGAGCAACAAA 57.535 32.000 17.76 12.08 0.00 2.83
302 306 7.894708 TGATATTTTCCTCATGAGCAACAAAA 58.105 30.769 17.76 16.75 0.00 2.44
303 307 8.533657 TGATATTTTCCTCATGAGCAACAAAAT 58.466 29.630 17.76 21.12 0.00 1.82
304 308 8.712285 ATATTTTCCTCATGAGCAACAAAATG 57.288 30.769 25.04 11.03 0.00 2.32
305 309 3.581024 TCCTCATGAGCAACAAAATGC 57.419 42.857 17.76 0.00 46.78 3.56
316 320 4.965062 GCAACAAAATGCCATCTCATTTG 58.035 39.130 2.93 0.00 43.56 2.32
317 321 4.691685 GCAACAAAATGCCATCTCATTTGA 59.308 37.500 6.58 0.00 43.56 2.69
318 322 5.179742 GCAACAAAATGCCATCTCATTTGAA 59.820 36.000 6.58 0.00 43.56 2.69
319 323 6.128117 GCAACAAAATGCCATCTCATTTGAAT 60.128 34.615 6.58 0.00 43.56 2.57
320 324 7.574217 GCAACAAAATGCCATCTCATTTGAATT 60.574 33.333 6.58 0.00 43.56 2.17
321 325 7.989416 ACAAAATGCCATCTCATTTGAATTT 57.011 28.000 6.58 0.00 43.56 1.82
322 326 8.398878 ACAAAATGCCATCTCATTTGAATTTT 57.601 26.923 6.58 0.00 43.56 1.82
323 327 8.293867 ACAAAATGCCATCTCATTTGAATTTTG 58.706 29.630 16.66 16.66 43.56 2.44
324 328 8.508062 CAAAATGCCATCTCATTTGAATTTTGA 58.492 29.630 14.74 0.00 43.56 2.69
325 329 8.624367 AAATGCCATCTCATTTGAATTTTGAA 57.376 26.923 1.45 0.00 42.96 2.69
326 330 8.624367 AATGCCATCTCATTTGAATTTTGAAA 57.376 26.923 0.00 0.00 33.18 2.69
327 331 7.661127 TGCCATCTCATTTGAATTTTGAAAG 57.339 32.000 0.00 0.00 0.00 2.62
328 332 6.651643 TGCCATCTCATTTGAATTTTGAAAGG 59.348 34.615 0.00 0.00 0.00 3.11
329 333 6.093082 GCCATCTCATTTGAATTTTGAAAGGG 59.907 38.462 0.00 0.00 0.00 3.95
330 334 6.093082 CCATCTCATTTGAATTTTGAAAGGGC 59.907 38.462 0.00 0.00 0.00 5.19
331 335 5.550290 TCTCATTTGAATTTTGAAAGGGCC 58.450 37.500 0.00 0.00 0.00 5.80
332 336 5.307716 TCTCATTTGAATTTTGAAAGGGCCT 59.692 36.000 0.00 0.00 0.00 5.19
333 337 5.307204 TCATTTGAATTTTGAAAGGGCCTG 58.693 37.500 6.92 0.00 0.00 4.85
334 338 5.071519 TCATTTGAATTTTGAAAGGGCCTGA 59.928 36.000 6.92 0.00 0.00 3.86
335 339 4.605640 TTGAATTTTGAAAGGGCCTGAG 57.394 40.909 6.92 0.00 0.00 3.35
336 340 2.899256 TGAATTTTGAAAGGGCCTGAGG 59.101 45.455 6.92 0.00 0.00 3.86
337 341 1.942776 ATTTTGAAAGGGCCTGAGGG 58.057 50.000 6.92 0.00 0.00 4.30
338 342 0.560688 TTTTGAAAGGGCCTGAGGGT 59.439 50.000 6.92 0.00 34.45 4.34
339 343 0.178964 TTTGAAAGGGCCTGAGGGTG 60.179 55.000 6.92 0.00 34.45 4.61
340 344 1.360393 TTGAAAGGGCCTGAGGGTGT 61.360 55.000 6.92 0.00 34.45 4.16
341 345 1.303643 GAAAGGGCCTGAGGGTGTG 60.304 63.158 6.92 0.00 34.45 3.82
342 346 2.771328 GAAAGGGCCTGAGGGTGTGG 62.771 65.000 6.92 0.00 34.45 4.17
345 349 3.721706 GGCCTGAGGGTGTGGGAG 61.722 72.222 0.00 0.00 34.45 4.30
346 350 2.930562 GCCTGAGGGTGTGGGAGT 60.931 66.667 0.00 0.00 34.45 3.85
347 351 1.612442 GCCTGAGGGTGTGGGAGTA 60.612 63.158 0.00 0.00 34.45 2.59
348 352 1.617947 GCCTGAGGGTGTGGGAGTAG 61.618 65.000 0.00 0.00 34.45 2.57
349 353 0.252284 CCTGAGGGTGTGGGAGTAGT 60.252 60.000 0.00 0.00 0.00 2.73
350 354 1.006758 CCTGAGGGTGTGGGAGTAGTA 59.993 57.143 0.00 0.00 0.00 1.82
351 355 2.379972 CTGAGGGTGTGGGAGTAGTAG 58.620 57.143 0.00 0.00 0.00 2.57
352 356 1.714787 TGAGGGTGTGGGAGTAGTAGT 59.285 52.381 0.00 0.00 0.00 2.73
353 357 2.921612 TGAGGGTGTGGGAGTAGTAGTA 59.078 50.000 0.00 0.00 0.00 1.82
354 358 3.334581 TGAGGGTGTGGGAGTAGTAGTAA 59.665 47.826 0.00 0.00 0.00 2.24
355 359 3.952967 GAGGGTGTGGGAGTAGTAGTAAG 59.047 52.174 0.00 0.00 0.00 2.34
356 360 3.595138 AGGGTGTGGGAGTAGTAGTAAGA 59.405 47.826 0.00 0.00 0.00 2.10
357 361 4.232354 AGGGTGTGGGAGTAGTAGTAAGAT 59.768 45.833 0.00 0.00 0.00 2.40
358 362 4.341520 GGGTGTGGGAGTAGTAGTAAGATG 59.658 50.000 0.00 0.00 0.00 2.90
359 363 4.341520 GGTGTGGGAGTAGTAGTAAGATGG 59.658 50.000 0.00 0.00 0.00 3.51
360 364 5.198965 GTGTGGGAGTAGTAGTAAGATGGA 58.801 45.833 0.00 0.00 0.00 3.41
361 365 5.834204 GTGTGGGAGTAGTAGTAAGATGGAT 59.166 44.000 0.00 0.00 0.00 3.41
362 366 5.833667 TGTGGGAGTAGTAGTAAGATGGATG 59.166 44.000 0.00 0.00 0.00 3.51
363 367 4.833380 TGGGAGTAGTAGTAAGATGGATGC 59.167 45.833 0.00 0.00 0.00 3.91
364 368 4.833380 GGGAGTAGTAGTAAGATGGATGCA 59.167 45.833 0.00 0.00 0.00 3.96
365 369 5.304614 GGGAGTAGTAGTAAGATGGATGCAA 59.695 44.000 0.00 0.00 0.00 4.08
366 370 6.014156 GGGAGTAGTAGTAAGATGGATGCAAT 60.014 42.308 0.00 0.00 0.00 3.56
367 371 7.445945 GGAGTAGTAGTAAGATGGATGCAATT 58.554 38.462 0.00 0.00 0.00 2.32
368 372 7.386299 GGAGTAGTAGTAAGATGGATGCAATTG 59.614 40.741 0.00 0.00 0.00 2.32
369 373 6.708054 AGTAGTAGTAAGATGGATGCAATTGC 59.292 38.462 23.69 23.69 42.50 3.56
385 389 6.675515 GCAATTGCACTAGTACAAAAGAAC 57.324 37.500 25.36 0.00 41.59 3.01
386 390 6.205784 GCAATTGCACTAGTACAAAAGAACA 58.794 36.000 25.36 0.00 41.59 3.18
387 391 6.695278 GCAATTGCACTAGTACAAAAGAACAA 59.305 34.615 25.36 0.00 41.59 2.83
388 392 7.382218 GCAATTGCACTAGTACAAAAGAACAAT 59.618 33.333 25.36 1.75 41.59 2.71
389 393 8.905702 CAATTGCACTAGTACAAAAGAACAATC 58.094 33.333 12.46 0.00 0.00 2.67
390 394 7.801716 TTGCACTAGTACAAAAGAACAATCT 57.198 32.000 6.04 0.00 37.57 2.40
391 395 7.189693 TGCACTAGTACAAAAGAACAATCTG 57.810 36.000 0.00 0.00 35.59 2.90
392 396 6.204688 TGCACTAGTACAAAAGAACAATCTGG 59.795 38.462 0.00 0.00 35.59 3.86
393 397 6.603095 CACTAGTACAAAAGAACAATCTGGC 58.397 40.000 0.00 0.00 35.59 4.85
394 398 6.428159 CACTAGTACAAAAGAACAATCTGGCT 59.572 38.462 0.00 0.00 35.59 4.75
395 399 5.948992 AGTACAAAAGAACAATCTGGCTC 57.051 39.130 0.00 0.00 35.59 4.70
396 400 5.376625 AGTACAAAAGAACAATCTGGCTCA 58.623 37.500 0.00 0.00 35.59 4.26
397 401 6.006449 AGTACAAAAGAACAATCTGGCTCAT 58.994 36.000 0.00 0.00 35.59 2.90
398 402 7.168219 AGTACAAAAGAACAATCTGGCTCATA 58.832 34.615 0.00 0.00 35.59 2.15
399 403 6.259550 ACAAAAGAACAATCTGGCTCATAC 57.740 37.500 0.00 0.00 35.59 2.39
400 404 5.769662 ACAAAAGAACAATCTGGCTCATACA 59.230 36.000 0.00 0.00 35.59 2.29
401 405 6.435277 ACAAAAGAACAATCTGGCTCATACAT 59.565 34.615 0.00 0.00 35.59 2.29
402 406 7.611467 ACAAAAGAACAATCTGGCTCATACATA 59.389 33.333 0.00 0.00 35.59 2.29
403 407 7.559590 AAAGAACAATCTGGCTCATACATAC 57.440 36.000 0.00 0.00 35.59 2.39
404 408 6.491714 AGAACAATCTGGCTCATACATACT 57.508 37.500 0.00 0.00 33.59 2.12
405 409 6.520272 AGAACAATCTGGCTCATACATACTC 58.480 40.000 0.00 0.00 33.59 2.59
406 410 5.220710 ACAATCTGGCTCATACATACTCC 57.779 43.478 0.00 0.00 0.00 3.85
407 411 4.040952 ACAATCTGGCTCATACATACTCCC 59.959 45.833 0.00 0.00 0.00 4.30
408 412 3.619900 TCTGGCTCATACATACTCCCT 57.380 47.619 0.00 0.00 0.00 4.20
409 413 3.501349 TCTGGCTCATACATACTCCCTC 58.499 50.000 0.00 0.00 0.00 4.30
410 414 2.564947 CTGGCTCATACATACTCCCTCC 59.435 54.545 0.00 0.00 0.00 4.30
411 415 1.546476 GGCTCATACATACTCCCTCCG 59.454 57.143 0.00 0.00 0.00 4.63
412 416 2.240279 GCTCATACATACTCCCTCCGT 58.760 52.381 0.00 0.00 0.00 4.69
413 417 2.628657 GCTCATACATACTCCCTCCGTT 59.371 50.000 0.00 0.00 0.00 4.44
414 418 3.305471 GCTCATACATACTCCCTCCGTTC 60.305 52.174 0.00 0.00 0.00 3.95
415 419 3.228453 TCATACATACTCCCTCCGTTCC 58.772 50.000 0.00 0.00 0.00 3.62
416 420 2.077687 TACATACTCCCTCCGTTCCC 57.922 55.000 0.00 0.00 0.00 3.97
417 421 0.042131 ACATACTCCCTCCGTTCCCA 59.958 55.000 0.00 0.00 0.00 4.37
418 422 1.200519 CATACTCCCTCCGTTCCCAA 58.799 55.000 0.00 0.00 0.00 4.12
419 423 1.557832 CATACTCCCTCCGTTCCCAAA 59.442 52.381 0.00 0.00 0.00 3.28
420 424 1.961133 TACTCCCTCCGTTCCCAAAT 58.039 50.000 0.00 0.00 0.00 2.32
421 425 0.328258 ACTCCCTCCGTTCCCAAATG 59.672 55.000 0.00 0.00 0.00 2.32
422 426 0.328258 CTCCCTCCGTTCCCAAATGT 59.672 55.000 0.00 0.00 0.00 2.71
423 427 1.557832 CTCCCTCCGTTCCCAAATGTA 59.442 52.381 0.00 0.00 0.00 2.29
424 428 1.986631 TCCCTCCGTTCCCAAATGTAA 59.013 47.619 0.00 0.00 0.00 2.41
425 429 2.026636 TCCCTCCGTTCCCAAATGTAAG 60.027 50.000 0.00 0.00 0.00 2.34
426 430 2.290705 CCCTCCGTTCCCAAATGTAAGT 60.291 50.000 0.00 0.00 0.00 2.24
427 431 3.007635 CCTCCGTTCCCAAATGTAAGTC 58.992 50.000 0.00 0.00 0.00 3.01
428 432 3.307480 CCTCCGTTCCCAAATGTAAGTCT 60.307 47.826 0.00 0.00 0.00 3.24
429 433 4.324267 CTCCGTTCCCAAATGTAAGTCTT 58.676 43.478 0.00 0.00 0.00 3.01
430 434 4.721132 TCCGTTCCCAAATGTAAGTCTTT 58.279 39.130 0.00 0.00 0.00 2.52
431 435 5.134661 TCCGTTCCCAAATGTAAGTCTTTT 58.865 37.500 0.00 0.00 0.00 2.27
432 436 5.595133 TCCGTTCCCAAATGTAAGTCTTTTT 59.405 36.000 0.00 0.00 0.00 1.94
433 437 6.771749 TCCGTTCCCAAATGTAAGTCTTTTTA 59.228 34.615 0.00 0.00 0.00 1.52
434 438 7.040961 TCCGTTCCCAAATGTAAGTCTTTTTAG 60.041 37.037 0.00 0.00 0.00 1.85
435 439 7.040961 CCGTTCCCAAATGTAAGTCTTTTTAGA 60.041 37.037 0.00 0.00 0.00 2.10
436 440 8.015658 CGTTCCCAAATGTAAGTCTTTTTAGAG 58.984 37.037 0.00 0.00 0.00 2.43
437 441 9.063615 GTTCCCAAATGTAAGTCTTTTTAGAGA 57.936 33.333 0.00 0.00 0.00 3.10
438 442 9.807921 TTCCCAAATGTAAGTCTTTTTAGAGAT 57.192 29.630 0.00 0.00 0.00 2.75
439 443 9.807921 TCCCAAATGTAAGTCTTTTTAGAGATT 57.192 29.630 0.00 0.00 0.00 2.40
525 529 7.615582 ACATCTGTATGTTGTAGTCCATTTG 57.384 36.000 0.00 0.00 44.07 2.32
526 530 7.394016 ACATCTGTATGTTGTAGTCCATTTGA 58.606 34.615 0.00 0.00 44.07 2.69
527 531 7.882791 ACATCTGTATGTTGTAGTCCATTTGAA 59.117 33.333 0.00 0.00 44.07 2.69
528 532 8.729756 CATCTGTATGTTGTAGTCCATTTGAAA 58.270 33.333 0.00 0.00 0.00 2.69
529 533 8.684386 TCTGTATGTTGTAGTCCATTTGAAAA 57.316 30.769 0.00 0.00 0.00 2.29
530 534 9.295825 TCTGTATGTTGTAGTCCATTTGAAAAT 57.704 29.630 0.00 0.00 0.00 1.82
531 535 9.345517 CTGTATGTTGTAGTCCATTTGAAAATG 57.654 33.333 8.51 8.51 44.12 2.32
532 536 8.855110 TGTATGTTGTAGTCCATTTGAAAATGT 58.145 29.630 13.28 0.23 43.24 2.71
533 537 9.341899 GTATGTTGTAGTCCATTTGAAAATGTC 57.658 33.333 13.28 7.30 43.24 3.06
534 538 7.581213 TGTTGTAGTCCATTTGAAAATGTCT 57.419 32.000 13.28 12.64 43.24 3.41
535 539 8.684386 TGTTGTAGTCCATTTGAAAATGTCTA 57.316 30.769 13.28 11.89 43.24 2.59
536 540 9.126151 TGTTGTAGTCCATTTGAAAATGTCTAA 57.874 29.630 13.28 3.58 43.24 2.10
537 541 9.959749 GTTGTAGTCCATTTGAAAATGTCTAAA 57.040 29.630 13.28 8.59 43.24 1.85
542 546 9.750125 AGTCCATTTGAAAATGTCTAAAAAGAC 57.250 29.630 13.28 10.49 43.24 3.01
543 547 9.750125 GTCCATTTGAAAATGTCTAAAAAGACT 57.250 29.630 13.28 0.00 43.24 3.24
564 568 8.485578 AGACTTATATTTAGGAACTCAGAGGG 57.514 38.462 1.53 0.00 41.75 4.30
565 569 8.290277 AGACTTATATTTAGGAACTCAGAGGGA 58.710 37.037 1.53 0.00 41.75 4.20
603 607 6.382869 GATTCGATCAATCTTTTCCCATGT 57.617 37.500 9.36 0.00 38.36 3.21
604 608 5.818136 TTCGATCAATCTTTTCCCATGTC 57.182 39.130 0.00 0.00 0.00 3.06
605 609 5.102953 TCGATCAATCTTTTCCCATGTCT 57.897 39.130 0.00 0.00 0.00 3.41
606 610 5.118990 TCGATCAATCTTTTCCCATGTCTC 58.881 41.667 0.00 0.00 0.00 3.36
607 611 4.877823 CGATCAATCTTTTCCCATGTCTCA 59.122 41.667 0.00 0.00 0.00 3.27
608 612 5.220739 CGATCAATCTTTTCCCATGTCTCAC 60.221 44.000 0.00 0.00 0.00 3.51
609 613 4.984295 TCAATCTTTTCCCATGTCTCACA 58.016 39.130 0.00 0.00 0.00 3.58
610 614 4.761739 TCAATCTTTTCCCATGTCTCACAC 59.238 41.667 0.00 0.00 0.00 3.82
611 615 2.766313 TCTTTTCCCATGTCTCACACG 58.234 47.619 0.00 0.00 0.00 4.49
612 616 2.104111 TCTTTTCCCATGTCTCACACGT 59.896 45.455 0.00 0.00 0.00 4.49
613 617 2.163818 TTTCCCATGTCTCACACGTC 57.836 50.000 0.00 0.00 0.00 4.34
614 618 1.044611 TTCCCATGTCTCACACGTCA 58.955 50.000 0.00 0.00 0.00 4.35
615 619 0.317160 TCCCATGTCTCACACGTCAC 59.683 55.000 0.00 0.00 0.00 3.67
616 620 0.033366 CCCATGTCTCACACGTCACA 59.967 55.000 0.00 0.00 0.00 3.58
617 621 1.139989 CCATGTCTCACACGTCACAC 58.860 55.000 0.00 0.00 0.00 3.82
618 622 1.537990 CCATGTCTCACACGTCACACA 60.538 52.381 0.00 0.00 0.00 3.72
619 623 1.788886 CATGTCTCACACGTCACACAG 59.211 52.381 0.00 0.00 0.00 3.66
620 624 1.099689 TGTCTCACACGTCACACAGA 58.900 50.000 0.00 0.00 0.00 3.41
621 625 1.202256 TGTCTCACACGTCACACAGAC 60.202 52.381 0.00 0.00 44.02 3.51
670 674 8.107399 TCAATCTATTCATCTTCAATCATGGC 57.893 34.615 0.00 0.00 0.00 4.40
671 675 7.722285 TCAATCTATTCATCTTCAATCATGGCA 59.278 33.333 0.00 0.00 0.00 4.92
672 676 7.689446 ATCTATTCATCTTCAATCATGGCAG 57.311 36.000 0.00 0.00 0.00 4.85
673 677 6.598503 TCTATTCATCTTCAATCATGGCAGT 58.401 36.000 0.00 0.00 0.00 4.40
674 678 7.738847 TCTATTCATCTTCAATCATGGCAGTA 58.261 34.615 0.00 0.00 0.00 2.74
675 679 6.630444 ATTCATCTTCAATCATGGCAGTAC 57.370 37.500 0.00 0.00 0.00 2.73
676 680 5.101648 TCATCTTCAATCATGGCAGTACA 57.898 39.130 0.00 0.00 0.00 2.90
677 681 5.499313 TCATCTTCAATCATGGCAGTACAA 58.501 37.500 0.00 0.00 0.00 2.41
678 682 5.355071 TCATCTTCAATCATGGCAGTACAAC 59.645 40.000 0.00 0.00 0.00 3.32
679 683 3.684305 TCTTCAATCATGGCAGTACAACG 59.316 43.478 0.00 0.00 0.00 4.10
680 684 3.326836 TCAATCATGGCAGTACAACGA 57.673 42.857 0.00 0.00 0.00 3.85
681 685 3.669536 TCAATCATGGCAGTACAACGAA 58.330 40.909 0.00 0.00 0.00 3.85
682 686 3.435327 TCAATCATGGCAGTACAACGAAC 59.565 43.478 0.00 0.00 0.00 3.95
683 687 2.535012 TCATGGCAGTACAACGAACA 57.465 45.000 0.00 0.00 0.00 3.18
684 688 3.052455 TCATGGCAGTACAACGAACAT 57.948 42.857 0.00 0.00 0.00 2.71
685 689 3.000041 TCATGGCAGTACAACGAACATC 59.000 45.455 0.00 0.00 0.00 3.06
686 690 2.535012 TGGCAGTACAACGAACATCA 57.465 45.000 0.00 0.00 0.00 3.07
687 691 2.412870 TGGCAGTACAACGAACATCAG 58.587 47.619 0.00 0.00 0.00 2.90
688 692 2.036604 TGGCAGTACAACGAACATCAGA 59.963 45.455 0.00 0.00 0.00 3.27
689 693 3.064207 GGCAGTACAACGAACATCAGAA 58.936 45.455 0.00 0.00 0.00 3.02
690 694 3.496884 GGCAGTACAACGAACATCAGAAA 59.503 43.478 0.00 0.00 0.00 2.52
691 695 4.154195 GGCAGTACAACGAACATCAGAAAT 59.846 41.667 0.00 0.00 0.00 2.17
692 696 5.350365 GGCAGTACAACGAACATCAGAAATA 59.650 40.000 0.00 0.00 0.00 1.40
693 697 6.128391 GGCAGTACAACGAACATCAGAAATAA 60.128 38.462 0.00 0.00 0.00 1.40
694 698 7.295201 GCAGTACAACGAACATCAGAAATAAA 58.705 34.615 0.00 0.00 0.00 1.40
695 699 7.801315 GCAGTACAACGAACATCAGAAATAAAA 59.199 33.333 0.00 0.00 0.00 1.52
696 700 9.658475 CAGTACAACGAACATCAGAAATAAAAA 57.342 29.630 0.00 0.00 0.00 1.94
724 728 2.636830 CAGATCCACTGGGTAAAGCTG 58.363 52.381 0.00 0.00 42.39 4.24
725 729 1.065126 AGATCCACTGGGTAAAGCTGC 60.065 52.381 0.00 0.00 34.93 5.25
726 730 0.392998 ATCCACTGGGTAAAGCTGCG 60.393 55.000 0.00 0.00 34.93 5.18
727 731 1.302511 CCACTGGGTAAAGCTGCGT 60.303 57.895 0.00 0.00 0.00 5.24
728 732 1.577328 CCACTGGGTAAAGCTGCGTG 61.577 60.000 0.00 0.00 0.00 5.34
729 733 0.884704 CACTGGGTAAAGCTGCGTGT 60.885 55.000 0.00 0.00 0.00 4.49
730 734 0.179029 ACTGGGTAAAGCTGCGTGTT 60.179 50.000 0.00 0.00 0.00 3.32
731 735 1.071071 ACTGGGTAAAGCTGCGTGTTA 59.929 47.619 0.00 0.00 0.00 2.41
732 736 1.732259 CTGGGTAAAGCTGCGTGTTAG 59.268 52.381 0.00 0.00 0.00 2.34
733 737 1.071071 TGGGTAAAGCTGCGTGTTAGT 59.929 47.619 0.00 0.00 0.00 2.24
734 738 2.299582 TGGGTAAAGCTGCGTGTTAGTA 59.700 45.455 0.00 0.00 0.00 1.82
735 739 2.669924 GGGTAAAGCTGCGTGTTAGTAC 59.330 50.000 0.00 0.00 0.00 2.73
736 740 3.582780 GGTAAAGCTGCGTGTTAGTACT 58.417 45.455 0.00 0.00 0.00 2.73
737 741 3.367025 GGTAAAGCTGCGTGTTAGTACTG 59.633 47.826 5.39 0.00 0.00 2.74
738 742 1.429463 AAGCTGCGTGTTAGTACTGC 58.571 50.000 5.39 0.00 0.00 4.40
739 743 0.603569 AGCTGCGTGTTAGTACTGCT 59.396 50.000 5.39 0.00 0.00 4.24
740 744 1.000955 AGCTGCGTGTTAGTACTGCTT 59.999 47.619 5.39 0.00 0.00 3.91
741 745 1.798813 GCTGCGTGTTAGTACTGCTTT 59.201 47.619 5.39 0.00 0.00 3.51
742 746 2.411547 GCTGCGTGTTAGTACTGCTTTG 60.412 50.000 5.39 0.00 0.00 2.77
743 747 3.057019 CTGCGTGTTAGTACTGCTTTGA 58.943 45.455 5.39 0.00 0.00 2.69
744 748 3.659786 TGCGTGTTAGTACTGCTTTGAT 58.340 40.909 5.39 0.00 0.00 2.57
745 749 3.431912 TGCGTGTTAGTACTGCTTTGATG 59.568 43.478 5.39 0.00 0.00 3.07
746 750 3.181520 GCGTGTTAGTACTGCTTTGATGG 60.182 47.826 5.39 0.00 0.00 3.51
747 751 4.242475 CGTGTTAGTACTGCTTTGATGGA 58.758 43.478 5.39 0.00 0.00 3.41
748 752 4.870426 CGTGTTAGTACTGCTTTGATGGAT 59.130 41.667 5.39 0.00 0.00 3.41
749 753 5.220472 CGTGTTAGTACTGCTTTGATGGATG 60.220 44.000 5.39 0.00 0.00 3.51
750 754 5.874810 GTGTTAGTACTGCTTTGATGGATGA 59.125 40.000 5.39 0.00 0.00 2.92
751 755 6.371548 GTGTTAGTACTGCTTTGATGGATGAA 59.628 38.462 5.39 0.00 0.00 2.57
752 756 6.595326 TGTTAGTACTGCTTTGATGGATGAAG 59.405 38.462 5.39 0.00 0.00 3.02
753 757 3.944015 AGTACTGCTTTGATGGATGAAGC 59.056 43.478 0.00 0.00 44.51 3.86
757 761 3.694535 GCTTTGATGGATGAAGCAGAG 57.305 47.619 2.72 0.00 43.89 3.35
758 762 3.015327 GCTTTGATGGATGAAGCAGAGT 58.985 45.455 2.72 0.00 43.89 3.24
759 763 3.065095 GCTTTGATGGATGAAGCAGAGTC 59.935 47.826 2.72 0.00 43.89 3.36
760 764 2.996249 TGATGGATGAAGCAGAGTCC 57.004 50.000 0.00 0.00 0.00 3.85
761 765 2.190538 TGATGGATGAAGCAGAGTCCA 58.809 47.619 3.82 3.82 44.22 4.02
762 766 2.169978 TGATGGATGAAGCAGAGTCCAG 59.830 50.000 6.96 0.00 43.42 3.86
763 767 1.942776 TGGATGAAGCAGAGTCCAGA 58.057 50.000 0.00 0.00 35.91 3.86
764 768 1.829849 TGGATGAAGCAGAGTCCAGAG 59.170 52.381 0.00 0.00 35.91 3.35
765 769 1.138661 GGATGAAGCAGAGTCCAGAGG 59.861 57.143 0.00 0.00 0.00 3.69
783 787 6.038985 CCAGAGGAGTAATGTGCATATATCG 58.961 44.000 0.00 0.00 0.00 2.92
827 831 6.814043 TCATGAAGAGCTAGTACTACTACGA 58.186 40.000 0.00 0.00 0.00 3.43
828 832 6.700960 TCATGAAGAGCTAGTACTACTACGAC 59.299 42.308 0.00 0.00 0.00 4.34
829 833 5.039984 TGAAGAGCTAGTACTACTACGACG 58.960 45.833 0.00 0.00 0.00 5.12
834 838 6.474102 AGAGCTAGTACTACTACGACGTTAAC 59.526 42.308 5.50 0.00 0.00 2.01
843 847 2.344872 GACGTTAACGCAGGGGGT 59.655 61.111 27.07 6.32 44.43 4.95
845 849 1.571215 GACGTTAACGCAGGGGGTTG 61.571 60.000 27.07 0.00 44.43 3.77
846 850 1.598685 CGTTAACGCAGGGGGTTGT 60.599 57.895 16.05 0.00 39.02 3.32
847 851 1.847890 CGTTAACGCAGGGGGTTGTG 61.848 60.000 16.05 0.00 39.02 3.33
848 852 0.820482 GTTAACGCAGGGGGTTGTGT 60.820 55.000 8.68 0.00 43.19 3.72
849 853 0.820074 TTAACGCAGGGGGTTGTGTG 60.820 55.000 8.68 0.00 40.67 3.82
870 900 5.186198 GTGGGACAGAAGCATTTATAGTGT 58.814 41.667 0.00 0.00 41.80 3.55
875 905 7.652507 GGGACAGAAGCATTTATAGTGTAGTAC 59.347 40.741 0.00 0.00 0.00 2.73
877 907 9.804758 GACAGAAGCATTTATAGTGTAGTACTT 57.195 33.333 0.00 0.00 40.89 2.24
878 908 9.587772 ACAGAAGCATTTATAGTGTAGTACTTG 57.412 33.333 0.00 0.00 40.89 3.16
879 909 9.035607 CAGAAGCATTTATAGTGTAGTACTTGG 57.964 37.037 0.00 0.00 40.89 3.61
880 910 8.978472 AGAAGCATTTATAGTGTAGTACTTGGA 58.022 33.333 0.00 0.00 40.89 3.53
881 911 9.595823 GAAGCATTTATAGTGTAGTACTTGGAA 57.404 33.333 0.00 0.00 40.89 3.53
882 912 8.943909 AGCATTTATAGTGTAGTACTTGGAAC 57.056 34.615 0.00 0.00 40.89 3.62
883 913 8.537016 AGCATTTATAGTGTAGTACTTGGAACA 58.463 33.333 0.00 0.00 40.89 3.18
884 914 8.818057 GCATTTATAGTGTAGTACTTGGAACAG 58.182 37.037 0.00 0.00 42.39 3.16
885 915 9.871238 CATTTATAGTGTAGTACTTGGAACAGT 57.129 33.333 0.00 4.86 42.39 3.55
886 916 9.871238 ATTTATAGTGTAGTACTTGGAACAGTG 57.129 33.333 12.26 0.00 42.39 3.66
933 963 1.981256 TGTTCTTGGACCTTTGCTCC 58.019 50.000 0.00 0.00 0.00 4.70
945 981 1.756538 CTTTGCTCCTCTCCTCTCTCC 59.243 57.143 0.00 0.00 0.00 3.71
1328 1411 1.474330 GGCCGGTGAAAGATCCATTT 58.526 50.000 1.90 0.00 0.00 2.32
1329 1412 1.405463 GGCCGGTGAAAGATCCATTTC 59.595 52.381 1.90 1.45 39.22 2.17
1330 1413 1.405463 GCCGGTGAAAGATCCATTTCC 59.595 52.381 1.90 1.43 38.21 3.13
1331 1414 1.670811 CCGGTGAAAGATCCATTTCCG 59.329 52.381 0.00 13.93 38.21 4.30
1333 1416 2.369394 GGTGAAAGATCCATTTCCGCT 58.631 47.619 5.30 0.00 38.21 5.52
1334 1417 2.356069 GGTGAAAGATCCATTTCCGCTC 59.644 50.000 5.30 0.00 38.21 5.03
1335 1418 3.274288 GTGAAAGATCCATTTCCGCTCT 58.726 45.455 5.30 0.00 38.21 4.09
1336 1419 3.691609 GTGAAAGATCCATTTCCGCTCTT 59.308 43.478 5.30 0.00 38.21 2.85
1337 1420 4.156739 GTGAAAGATCCATTTCCGCTCTTT 59.843 41.667 5.30 0.00 38.21 2.52
1338 1421 4.396166 TGAAAGATCCATTTCCGCTCTTTC 59.604 41.667 13.64 13.64 46.09 2.62
1339 1422 2.924421 AGATCCATTTCCGCTCTTTCC 58.076 47.619 0.00 0.00 0.00 3.13
1340 1423 2.507471 AGATCCATTTCCGCTCTTTCCT 59.493 45.455 0.00 0.00 0.00 3.36
1341 1424 2.879103 TCCATTTCCGCTCTTTCCTT 57.121 45.000 0.00 0.00 0.00 3.36
1508 1594 3.665675 CTTCTTCGACCCCTGCCCG 62.666 68.421 0.00 0.00 0.00 6.13
1534 1620 4.129737 CGCCGTCGTGTCCTCCAT 62.130 66.667 0.00 0.00 0.00 3.41
1802 1888 2.010286 CGACGACAACCGCGTGTTA 61.010 57.895 4.92 0.00 42.77 2.41
2201 2541 7.160049 GGAGTTCCAGCTTAAACTAAGTACTT 58.840 38.462 13.68 13.68 35.90 2.24
2256 2605 5.544176 TCATCTTTGATGGTAGTCCTATCCC 59.456 44.000 7.58 0.00 34.23 3.85
2288 2640 7.781548 AGTCAACTTTAATGTCGTTGTAGTT 57.218 32.000 0.00 0.00 39.14 2.24
2289 2641 7.627340 AGTCAACTTTAATGTCGTTGTAGTTG 58.373 34.615 18.54 18.54 40.33 3.16
2290 2642 7.279313 AGTCAACTTTAATGTCGTTGTAGTTGT 59.721 33.333 21.18 9.95 40.13 3.32
2291 2643 8.542132 GTCAACTTTAATGTCGTTGTAGTTGTA 58.458 33.333 21.18 12.56 40.13 2.41
2292 2644 8.757789 TCAACTTTAATGTCGTTGTAGTTGTAG 58.242 33.333 21.18 7.73 40.13 2.74
2293 2645 7.647907 ACTTTAATGTCGTTGTAGTTGTAGG 57.352 36.000 0.00 0.00 0.00 3.18
2294 2646 6.146673 ACTTTAATGTCGTTGTAGTTGTAGGC 59.853 38.462 0.00 0.00 0.00 3.93
2305 2661 8.333186 CGTTGTAGTTGTAGGCTATTTAAATCC 58.667 37.037 3.39 0.72 0.00 3.01
2369 2730 5.556915 TCTTCTTCCGGTGTTATGTCATTT 58.443 37.500 0.00 0.00 0.00 2.32
2373 2734 5.943416 TCTTCCGGTGTTATGTCATTTCAAT 59.057 36.000 0.00 0.00 0.00 2.57
2419 2780 6.061022 TGTTGCAATTTACTCCCTATCTCA 57.939 37.500 0.59 0.00 0.00 3.27
2452 2901 3.217626 AGAGCTCCCTTGTGTCAAAAAG 58.782 45.455 10.93 0.00 0.00 2.27
2462 2911 5.278660 CCTTGTGTCAAAAAGATCTCCCAAG 60.279 44.000 0.00 0.00 0.00 3.61
2545 2997 6.000219 CAGCATATAACCCTGCAGTAATTCT 59.000 40.000 13.81 0.00 40.88 2.40
2655 3161 2.722094 TGCTTTGAACTGGAACACTGT 58.278 42.857 0.00 0.00 0.00 3.55
2685 3195 1.768275 TCTCTGGTTGCAGGACTTTGA 59.232 47.619 0.00 0.00 0.00 2.69
2717 3227 3.099141 GGAGGCCAAGGATTTGATTTGA 58.901 45.455 5.01 0.00 36.36 2.69
2783 3314 5.885230 TTCTTACAGGATTGAGCACATTG 57.115 39.130 0.00 0.00 0.00 2.82
2797 3328 3.656559 GCACATTGCAAGGATCAAAAGT 58.343 40.909 19.41 0.00 44.26 2.66
2798 3329 3.676646 GCACATTGCAAGGATCAAAAGTC 59.323 43.478 19.41 0.00 44.26 3.01
2799 3330 4.560108 GCACATTGCAAGGATCAAAAGTCT 60.560 41.667 19.41 0.00 44.26 3.24
2939 3905 5.535029 TCCTAAGGCCCAAACTTATCTCTA 58.465 41.667 0.00 0.00 30.69 2.43
2963 3929 4.499183 ACACTGCTCAGACTGCTAATAAC 58.501 43.478 3.60 0.00 0.00 1.89
2968 3934 4.393062 TGCTCAGACTGCTAATAACAAAGC 59.607 41.667 0.00 0.00 39.25 3.51
2999 3969 1.149133 AGGGATGGAGTTTGCCCCTT 61.149 55.000 0.00 0.00 44.60 3.95
3011 3981 1.229496 GCCCCTTCCCCCACAAAAT 60.229 57.895 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
118 122 8.843885 ACTCGAACTTTTAAAAAGGTAGCTAT 57.156 30.769 0.00 0.00 0.00 2.97
168 172 5.531634 AGAAATTGAAATGCGTGTGTCAAT 58.468 33.333 6.84 6.84 41.34 2.57
178 182 6.035327 GCCATGTGTTCTAGAAATTGAAATGC 59.965 38.462 6.78 0.51 0.00 3.56
219 223 5.643348 TCAACAACTTACATGCATCTACCTG 59.357 40.000 0.00 0.00 0.00 4.00
229 233 6.728200 TCAGCTTCTTTCAACAACTTACATG 58.272 36.000 0.00 0.00 0.00 3.21
234 238 4.646492 ACCATCAGCTTCTTTCAACAACTT 59.354 37.500 0.00 0.00 0.00 2.66
235 239 4.210331 ACCATCAGCTTCTTTCAACAACT 58.790 39.130 0.00 0.00 0.00 3.16
236 240 4.574599 ACCATCAGCTTCTTTCAACAAC 57.425 40.909 0.00 0.00 0.00 3.32
237 241 6.294675 CCATTACCATCAGCTTCTTTCAACAA 60.295 38.462 0.00 0.00 0.00 2.83
238 242 5.183713 CCATTACCATCAGCTTCTTTCAACA 59.816 40.000 0.00 0.00 0.00 3.33
239 243 5.415701 TCCATTACCATCAGCTTCTTTCAAC 59.584 40.000 0.00 0.00 0.00 3.18
240 244 5.569355 TCCATTACCATCAGCTTCTTTCAA 58.431 37.500 0.00 0.00 0.00 2.69
241 245 5.178096 TCCATTACCATCAGCTTCTTTCA 57.822 39.130 0.00 0.00 0.00 2.69
242 246 5.189180 ACTCCATTACCATCAGCTTCTTTC 58.811 41.667 0.00 0.00 0.00 2.62
243 247 5.184892 ACTCCATTACCATCAGCTTCTTT 57.815 39.130 0.00 0.00 0.00 2.52
244 248 4.851639 ACTCCATTACCATCAGCTTCTT 57.148 40.909 0.00 0.00 0.00 2.52
245 249 4.716784 TGTACTCCATTACCATCAGCTTCT 59.283 41.667 0.00 0.00 0.00 2.85
246 250 5.023533 TGTACTCCATTACCATCAGCTTC 57.976 43.478 0.00 0.00 0.00 3.86
247 251 5.431765 CTTGTACTCCATTACCATCAGCTT 58.568 41.667 0.00 0.00 0.00 3.74
248 252 4.684485 GCTTGTACTCCATTACCATCAGCT 60.684 45.833 0.00 0.00 0.00 4.24
249 253 3.561725 GCTTGTACTCCATTACCATCAGC 59.438 47.826 0.00 0.00 0.00 4.26
250 254 4.769688 TGCTTGTACTCCATTACCATCAG 58.230 43.478 0.00 0.00 0.00 2.90
251 255 4.835284 TGCTTGTACTCCATTACCATCA 57.165 40.909 0.00 0.00 0.00 3.07
252 256 4.023707 GCATGCTTGTACTCCATTACCATC 60.024 45.833 11.37 0.00 0.00 3.51
253 257 3.885297 GCATGCTTGTACTCCATTACCAT 59.115 43.478 11.37 0.00 0.00 3.55
254 258 3.054434 AGCATGCTTGTACTCCATTACCA 60.054 43.478 16.30 0.00 0.00 3.25
255 259 3.545703 AGCATGCTTGTACTCCATTACC 58.454 45.455 16.30 0.00 0.00 2.85
256 260 4.913376 CAAGCATGCTTGTACTCCATTAC 58.087 43.478 40.10 0.15 45.91 1.89
268 272 6.322969 TCATGAGGAAAATATCAAGCATGCTT 59.677 34.615 27.21 27.21 34.78 3.91
269 273 5.831525 TCATGAGGAAAATATCAAGCATGCT 59.168 36.000 16.30 16.30 34.78 3.79
270 274 6.080648 TCATGAGGAAAATATCAAGCATGC 57.919 37.500 10.51 10.51 34.78 4.06
271 275 6.150318 GCTCATGAGGAAAATATCAAGCATG 58.850 40.000 23.89 0.00 35.47 4.06
272 276 5.831525 TGCTCATGAGGAAAATATCAAGCAT 59.168 36.000 23.89 0.00 35.45 3.79
273 277 5.195185 TGCTCATGAGGAAAATATCAAGCA 58.805 37.500 23.89 8.93 37.10 3.91
274 278 5.762825 TGCTCATGAGGAAAATATCAAGC 57.237 39.130 23.89 6.33 32.41 4.01
275 279 7.092137 TGTTGCTCATGAGGAAAATATCAAG 57.908 36.000 28.53 0.00 40.42 3.02
276 280 7.465353 TTGTTGCTCATGAGGAAAATATCAA 57.535 32.000 28.53 23.23 40.42 2.57
277 281 7.465353 TTTGTTGCTCATGAGGAAAATATCA 57.535 32.000 28.53 19.34 40.42 2.15
278 282 8.814235 CATTTTGTTGCTCATGAGGAAAATATC 58.186 33.333 28.53 17.17 40.42 1.63
279 283 7.279313 GCATTTTGTTGCTCATGAGGAAAATAT 59.721 33.333 28.53 19.97 40.42 1.28
280 284 6.591062 GCATTTTGTTGCTCATGAGGAAAATA 59.409 34.615 28.53 17.22 40.42 1.40
281 285 5.410439 GCATTTTGTTGCTCATGAGGAAAAT 59.590 36.000 28.53 21.31 40.42 1.82
282 286 4.751098 GCATTTTGTTGCTCATGAGGAAAA 59.249 37.500 28.53 22.15 40.42 2.29
283 287 4.309099 GCATTTTGTTGCTCATGAGGAAA 58.691 39.130 28.53 15.30 40.42 3.13
284 288 3.306225 GGCATTTTGTTGCTCATGAGGAA 60.306 43.478 24.06 24.06 42.38 3.36
285 289 2.231964 GGCATTTTGTTGCTCATGAGGA 59.768 45.455 23.89 19.17 42.38 3.71
286 290 2.028839 TGGCATTTTGTTGCTCATGAGG 60.029 45.455 23.89 6.34 42.38 3.86
287 291 3.306917 TGGCATTTTGTTGCTCATGAG 57.693 42.857 18.84 18.84 42.38 2.90
288 292 3.512329 AGATGGCATTTTGTTGCTCATGA 59.488 39.130 0.00 0.00 42.38 3.07
289 293 3.857052 AGATGGCATTTTGTTGCTCATG 58.143 40.909 0.00 0.00 42.38 3.07
290 294 3.512329 TGAGATGGCATTTTGTTGCTCAT 59.488 39.130 0.00 0.00 42.38 2.90
291 295 2.892215 TGAGATGGCATTTTGTTGCTCA 59.108 40.909 0.00 5.04 42.38 4.26
292 296 3.581024 TGAGATGGCATTTTGTTGCTC 57.419 42.857 0.00 2.18 42.38 4.26
293 297 4.546829 AATGAGATGGCATTTTGTTGCT 57.453 36.364 0.00 0.00 42.38 3.91
294 298 4.691685 TCAAATGAGATGGCATTTTGTTGC 59.308 37.500 17.36 0.00 43.83 4.17
295 299 6.788684 TTCAAATGAGATGGCATTTTGTTG 57.211 33.333 17.36 11.63 43.83 3.33
296 300 7.989416 AATTCAAATGAGATGGCATTTTGTT 57.011 28.000 17.36 7.11 43.83 2.83
297 301 7.989416 AAATTCAAATGAGATGGCATTTTGT 57.011 28.000 17.36 2.38 43.83 2.83
298 302 8.508062 TCAAAATTCAAATGAGATGGCATTTTG 58.492 29.630 13.61 13.61 43.83 2.44
299 303 8.624367 TCAAAATTCAAATGAGATGGCATTTT 57.376 26.923 0.00 0.00 43.83 1.82
300 304 8.624367 TTCAAAATTCAAATGAGATGGCATTT 57.376 26.923 0.00 0.00 46.35 2.32
301 305 8.624367 TTTCAAAATTCAAATGAGATGGCATT 57.376 26.923 0.00 0.00 40.04 3.56
302 306 7.335924 CCTTTCAAAATTCAAATGAGATGGCAT 59.664 33.333 0.00 0.00 0.00 4.40
303 307 6.651643 CCTTTCAAAATTCAAATGAGATGGCA 59.348 34.615 0.00 0.00 0.00 4.92
304 308 6.093082 CCCTTTCAAAATTCAAATGAGATGGC 59.907 38.462 0.00 0.00 0.00 4.40
305 309 6.093082 GCCCTTTCAAAATTCAAATGAGATGG 59.907 38.462 0.00 0.00 0.00 3.51
306 310 6.093082 GGCCCTTTCAAAATTCAAATGAGATG 59.907 38.462 0.00 0.00 0.00 2.90
307 311 6.013119 AGGCCCTTTCAAAATTCAAATGAGAT 60.013 34.615 0.00 0.00 0.00 2.75
308 312 5.307716 AGGCCCTTTCAAAATTCAAATGAGA 59.692 36.000 0.00 0.00 0.00 3.27
309 313 5.410439 CAGGCCCTTTCAAAATTCAAATGAG 59.590 40.000 0.00 0.00 0.00 2.90
310 314 5.071519 TCAGGCCCTTTCAAAATTCAAATGA 59.928 36.000 0.00 0.00 0.00 2.57
311 315 5.307204 TCAGGCCCTTTCAAAATTCAAATG 58.693 37.500 0.00 0.00 0.00 2.32
312 316 5.513614 CCTCAGGCCCTTTCAAAATTCAAAT 60.514 40.000 0.00 0.00 0.00 2.32
313 317 4.202346 CCTCAGGCCCTTTCAAAATTCAAA 60.202 41.667 0.00 0.00 0.00 2.69
314 318 3.324556 CCTCAGGCCCTTTCAAAATTCAA 59.675 43.478 0.00 0.00 0.00 2.69
315 319 2.899256 CCTCAGGCCCTTTCAAAATTCA 59.101 45.455 0.00 0.00 0.00 2.57
316 320 2.234661 CCCTCAGGCCCTTTCAAAATTC 59.765 50.000 0.00 0.00 0.00 2.17
317 321 2.259917 CCCTCAGGCCCTTTCAAAATT 58.740 47.619 0.00 0.00 0.00 1.82
318 322 1.149923 ACCCTCAGGCCCTTTCAAAAT 59.850 47.619 0.00 0.00 36.11 1.82
319 323 0.560688 ACCCTCAGGCCCTTTCAAAA 59.439 50.000 0.00 0.00 36.11 2.44
320 324 0.178964 CACCCTCAGGCCCTTTCAAA 60.179 55.000 0.00 0.00 36.11 2.69
321 325 1.360393 ACACCCTCAGGCCCTTTCAA 61.360 55.000 0.00 0.00 36.11 2.69
322 326 1.774217 ACACCCTCAGGCCCTTTCA 60.774 57.895 0.00 0.00 36.11 2.69
323 327 1.303643 CACACCCTCAGGCCCTTTC 60.304 63.158 0.00 0.00 36.11 2.62
324 328 2.845345 CCACACCCTCAGGCCCTTT 61.845 63.158 0.00 0.00 36.11 3.11
325 329 3.260100 CCACACCCTCAGGCCCTT 61.260 66.667 0.00 0.00 36.11 3.95
328 332 3.721706 CTCCCACACCCTCAGGCC 61.722 72.222 0.00 0.00 36.11 5.19
329 333 1.612442 TACTCCCACACCCTCAGGC 60.612 63.158 0.00 0.00 36.11 4.85
330 334 0.252284 ACTACTCCCACACCCTCAGG 60.252 60.000 0.00 0.00 40.04 3.86
331 335 2.291670 ACTACTACTCCCACACCCTCAG 60.292 54.545 0.00 0.00 0.00 3.35
332 336 1.714787 ACTACTACTCCCACACCCTCA 59.285 52.381 0.00 0.00 0.00 3.86
333 337 2.528673 ACTACTACTCCCACACCCTC 57.471 55.000 0.00 0.00 0.00 4.30
334 338 3.595138 TCTTACTACTACTCCCACACCCT 59.405 47.826 0.00 0.00 0.00 4.34
335 339 3.973425 TCTTACTACTACTCCCACACCC 58.027 50.000 0.00 0.00 0.00 4.61
336 340 4.341520 CCATCTTACTACTACTCCCACACC 59.658 50.000 0.00 0.00 0.00 4.16
337 341 5.198965 TCCATCTTACTACTACTCCCACAC 58.801 45.833 0.00 0.00 0.00 3.82
338 342 5.461516 TCCATCTTACTACTACTCCCACA 57.538 43.478 0.00 0.00 0.00 4.17
339 343 5.279056 GCATCCATCTTACTACTACTCCCAC 60.279 48.000 0.00 0.00 0.00 4.61
340 344 4.833380 GCATCCATCTTACTACTACTCCCA 59.167 45.833 0.00 0.00 0.00 4.37
341 345 4.833380 TGCATCCATCTTACTACTACTCCC 59.167 45.833 0.00 0.00 0.00 4.30
342 346 6.406692 TTGCATCCATCTTACTACTACTCC 57.593 41.667 0.00 0.00 0.00 3.85
343 347 7.095439 GCAATTGCATCCATCTTACTACTACTC 60.095 40.741 25.36 0.00 41.59 2.59
344 348 6.708054 GCAATTGCATCCATCTTACTACTACT 59.292 38.462 25.36 0.00 41.59 2.57
345 349 6.892691 GCAATTGCATCCATCTTACTACTAC 58.107 40.000 25.36 0.00 41.59 2.73
362 366 6.205784 TGTTCTTTTGTACTAGTGCAATTGC 58.794 36.000 24.35 23.69 42.50 3.56
363 367 8.801715 ATTGTTCTTTTGTACTAGTGCAATTG 57.198 30.769 24.35 19.15 35.24 2.32
364 368 8.850156 AGATTGTTCTTTTGTACTAGTGCAATT 58.150 29.630 24.35 1.17 35.24 2.32
365 369 8.292448 CAGATTGTTCTTTTGTACTAGTGCAAT 58.708 33.333 24.35 9.20 35.24 3.56
366 370 7.255104 CCAGATTGTTCTTTTGTACTAGTGCAA 60.255 37.037 20.78 20.78 33.46 4.08
367 371 6.204688 CCAGATTGTTCTTTTGTACTAGTGCA 59.795 38.462 9.84 9.84 0.00 4.57
368 372 6.603095 CCAGATTGTTCTTTTGTACTAGTGC 58.397 40.000 5.39 4.49 0.00 4.40
369 373 6.428159 AGCCAGATTGTTCTTTTGTACTAGTG 59.572 38.462 5.39 0.00 0.00 2.74
370 374 6.534634 AGCCAGATTGTTCTTTTGTACTAGT 58.465 36.000 0.00 0.00 0.00 2.57
371 375 6.650807 TGAGCCAGATTGTTCTTTTGTACTAG 59.349 38.462 0.00 0.00 0.00 2.57
372 376 6.530120 TGAGCCAGATTGTTCTTTTGTACTA 58.470 36.000 0.00 0.00 0.00 1.82
373 377 5.376625 TGAGCCAGATTGTTCTTTTGTACT 58.623 37.500 0.00 0.00 0.00 2.73
374 378 5.689383 TGAGCCAGATTGTTCTTTTGTAC 57.311 39.130 0.00 0.00 0.00 2.90
375 379 6.939730 TGTATGAGCCAGATTGTTCTTTTGTA 59.060 34.615 0.00 0.00 0.00 2.41
376 380 5.769662 TGTATGAGCCAGATTGTTCTTTTGT 59.230 36.000 0.00 0.00 0.00 2.83
377 381 6.258230 TGTATGAGCCAGATTGTTCTTTTG 57.742 37.500 0.00 0.00 0.00 2.44
378 382 7.831193 AGTATGTATGAGCCAGATTGTTCTTTT 59.169 33.333 0.00 0.00 0.00 2.27
379 383 7.341805 AGTATGTATGAGCCAGATTGTTCTTT 58.658 34.615 0.00 0.00 0.00 2.52
380 384 6.893583 AGTATGTATGAGCCAGATTGTTCTT 58.106 36.000 0.00 0.00 0.00 2.52
381 385 6.463614 GGAGTATGTATGAGCCAGATTGTTCT 60.464 42.308 0.00 0.00 0.00 3.01
382 386 5.698545 GGAGTATGTATGAGCCAGATTGTTC 59.301 44.000 0.00 0.00 0.00 3.18
383 387 5.455326 GGGAGTATGTATGAGCCAGATTGTT 60.455 44.000 0.00 0.00 0.00 2.83
384 388 4.040952 GGGAGTATGTATGAGCCAGATTGT 59.959 45.833 0.00 0.00 0.00 2.71
385 389 4.285517 AGGGAGTATGTATGAGCCAGATTG 59.714 45.833 0.00 0.00 0.00 2.67
386 390 4.497516 AGGGAGTATGTATGAGCCAGATT 58.502 43.478 0.00 0.00 0.00 2.40
387 391 4.093011 GAGGGAGTATGTATGAGCCAGAT 58.907 47.826 0.00 0.00 0.00 2.90
388 392 3.501349 GAGGGAGTATGTATGAGCCAGA 58.499 50.000 0.00 0.00 0.00 3.86
389 393 2.564947 GGAGGGAGTATGTATGAGCCAG 59.435 54.545 0.00 0.00 0.00 4.85
390 394 2.609747 GGAGGGAGTATGTATGAGCCA 58.390 52.381 0.00 0.00 0.00 4.75
391 395 1.546476 CGGAGGGAGTATGTATGAGCC 59.454 57.143 0.00 0.00 0.00 4.70
392 396 2.240279 ACGGAGGGAGTATGTATGAGC 58.760 52.381 0.00 0.00 0.00 4.26
393 397 3.256136 GGAACGGAGGGAGTATGTATGAG 59.744 52.174 0.00 0.00 0.00 2.90
394 398 3.228453 GGAACGGAGGGAGTATGTATGA 58.772 50.000 0.00 0.00 0.00 2.15
395 399 2.299297 GGGAACGGAGGGAGTATGTATG 59.701 54.545 0.00 0.00 0.00 2.39
396 400 2.090943 TGGGAACGGAGGGAGTATGTAT 60.091 50.000 0.00 0.00 0.00 2.29
397 401 1.288633 TGGGAACGGAGGGAGTATGTA 59.711 52.381 0.00 0.00 0.00 2.29
398 402 0.042131 TGGGAACGGAGGGAGTATGT 59.958 55.000 0.00 0.00 0.00 2.29
399 403 1.200519 TTGGGAACGGAGGGAGTATG 58.799 55.000 0.00 0.00 0.00 2.39
400 404 1.961133 TTTGGGAACGGAGGGAGTAT 58.039 50.000 0.00 0.00 0.00 2.12
401 405 1.557832 CATTTGGGAACGGAGGGAGTA 59.442 52.381 0.00 0.00 0.00 2.59
402 406 0.328258 CATTTGGGAACGGAGGGAGT 59.672 55.000 0.00 0.00 0.00 3.85
403 407 0.328258 ACATTTGGGAACGGAGGGAG 59.672 55.000 0.00 0.00 0.00 4.30
404 408 1.659022 TACATTTGGGAACGGAGGGA 58.341 50.000 0.00 0.00 0.00 4.20
405 409 2.290705 ACTTACATTTGGGAACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
406 410 3.007635 GACTTACATTTGGGAACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
407 411 3.939066 AGACTTACATTTGGGAACGGAG 58.061 45.455 0.00 0.00 0.00 4.63
408 412 4.360951 AAGACTTACATTTGGGAACGGA 57.639 40.909 0.00 0.00 0.00 4.69
409 413 5.447624 AAAAGACTTACATTTGGGAACGG 57.552 39.130 0.00 0.00 0.00 4.44
410 414 7.867752 TCTAAAAAGACTTACATTTGGGAACG 58.132 34.615 0.00 0.00 0.00 3.95
411 415 9.063615 TCTCTAAAAAGACTTACATTTGGGAAC 57.936 33.333 0.00 0.00 0.00 3.62
412 416 9.807921 ATCTCTAAAAAGACTTACATTTGGGAA 57.192 29.630 0.00 0.00 0.00 3.97
413 417 9.807921 AATCTCTAAAAAGACTTACATTTGGGA 57.192 29.630 0.00 0.00 0.00 4.37
499 503 9.330063 CAAATGGACTACAACATACAGATGTAT 57.670 33.333 0.00 0.00 45.93 2.29
500 504 8.536175 TCAAATGGACTACAACATACAGATGTA 58.464 33.333 0.00 0.00 45.93 2.29
502 506 7.848223 TCAAATGGACTACAACATACAGATG 57.152 36.000 0.00 0.00 39.16 2.90
503 507 8.862325 TTTCAAATGGACTACAACATACAGAT 57.138 30.769 0.00 0.00 0.00 2.90
504 508 8.684386 TTTTCAAATGGACTACAACATACAGA 57.316 30.769 0.00 0.00 0.00 3.41
505 509 9.345517 CATTTTCAAATGGACTACAACATACAG 57.654 33.333 4.57 0.00 41.54 2.74
538 542 8.929487 CCCTCTGAGTTCCTAAATATAAGTCTT 58.071 37.037 3.66 0.00 0.00 3.01
539 543 8.290277 TCCCTCTGAGTTCCTAAATATAAGTCT 58.710 37.037 3.66 0.00 0.00 3.24
540 544 8.480133 TCCCTCTGAGTTCCTAAATATAAGTC 57.520 38.462 3.66 0.00 0.00 3.01
541 545 8.485578 CTCCCTCTGAGTTCCTAAATATAAGT 57.514 38.462 3.66 0.00 36.27 2.24
580 584 6.261826 AGACATGGGAAAAGATTGATCGAATC 59.738 38.462 0.00 8.84 40.92 2.52
581 585 6.125029 AGACATGGGAAAAGATTGATCGAAT 58.875 36.000 0.00 0.00 0.00 3.34
582 586 5.500234 AGACATGGGAAAAGATTGATCGAA 58.500 37.500 0.00 0.00 0.00 3.71
583 587 5.102953 AGACATGGGAAAAGATTGATCGA 57.897 39.130 0.00 0.00 0.00 3.59
584 588 4.877823 TGAGACATGGGAAAAGATTGATCG 59.122 41.667 0.00 0.00 0.00 3.69
585 589 5.649395 TGTGAGACATGGGAAAAGATTGATC 59.351 40.000 0.00 0.00 0.00 2.92
586 590 5.416952 GTGTGAGACATGGGAAAAGATTGAT 59.583 40.000 0.00 0.00 0.00 2.57
587 591 4.761739 GTGTGAGACATGGGAAAAGATTGA 59.238 41.667 0.00 0.00 0.00 2.57
588 592 4.378770 CGTGTGAGACATGGGAAAAGATTG 60.379 45.833 0.00 0.00 31.65 2.67
589 593 3.753272 CGTGTGAGACATGGGAAAAGATT 59.247 43.478 0.00 0.00 31.65 2.40
590 594 3.244561 ACGTGTGAGACATGGGAAAAGAT 60.245 43.478 0.00 0.00 39.36 2.40
591 595 2.104111 ACGTGTGAGACATGGGAAAAGA 59.896 45.455 0.00 0.00 39.36 2.52
592 596 2.480419 GACGTGTGAGACATGGGAAAAG 59.520 50.000 0.00 0.00 39.36 2.27
593 597 2.158885 TGACGTGTGAGACATGGGAAAA 60.159 45.455 0.00 0.00 39.36 2.29
594 598 1.414550 TGACGTGTGAGACATGGGAAA 59.585 47.619 0.00 0.00 39.36 3.13
595 599 1.044611 TGACGTGTGAGACATGGGAA 58.955 50.000 0.00 0.00 39.36 3.97
596 600 0.317160 GTGACGTGTGAGACATGGGA 59.683 55.000 0.00 0.00 39.36 4.37
597 601 0.033366 TGTGACGTGTGAGACATGGG 59.967 55.000 0.00 0.00 39.36 4.00
598 602 1.139989 GTGTGACGTGTGAGACATGG 58.860 55.000 0.00 0.00 39.36 3.66
599 603 1.788886 CTGTGTGACGTGTGAGACATG 59.211 52.381 0.00 0.00 40.80 3.21
600 604 1.681264 TCTGTGTGACGTGTGAGACAT 59.319 47.619 0.00 0.00 0.00 3.06
601 605 1.099689 TCTGTGTGACGTGTGAGACA 58.900 50.000 0.00 0.00 0.00 3.41
602 606 1.478137 GTCTGTGTGACGTGTGAGAC 58.522 55.000 0.00 0.00 35.81 3.36
603 607 3.938653 GTCTGTGTGACGTGTGAGA 57.061 52.632 0.00 0.00 35.81 3.27
644 648 8.573885 GCCATGATTGAAGATGAATAGATTGAA 58.426 33.333 0.00 0.00 0.00 2.69
645 649 7.722285 TGCCATGATTGAAGATGAATAGATTGA 59.278 33.333 0.00 0.00 0.00 2.57
646 650 7.882179 TGCCATGATTGAAGATGAATAGATTG 58.118 34.615 0.00 0.00 0.00 2.67
647 651 7.724506 ACTGCCATGATTGAAGATGAATAGATT 59.275 33.333 0.00 0.00 0.00 2.40
648 652 7.232188 ACTGCCATGATTGAAGATGAATAGAT 58.768 34.615 0.00 0.00 0.00 1.98
649 653 6.598503 ACTGCCATGATTGAAGATGAATAGA 58.401 36.000 0.00 0.00 0.00 1.98
650 654 6.879276 ACTGCCATGATTGAAGATGAATAG 57.121 37.500 0.00 0.00 0.00 1.73
651 655 7.281841 TGTACTGCCATGATTGAAGATGAATA 58.718 34.615 0.00 0.00 0.00 1.75
652 656 6.124340 TGTACTGCCATGATTGAAGATGAAT 58.876 36.000 0.00 0.00 0.00 2.57
653 657 5.499313 TGTACTGCCATGATTGAAGATGAA 58.501 37.500 0.00 0.00 0.00 2.57
654 658 5.101648 TGTACTGCCATGATTGAAGATGA 57.898 39.130 0.00 0.00 0.00 2.92
655 659 5.575957 GTTGTACTGCCATGATTGAAGATG 58.424 41.667 0.00 0.00 0.00 2.90
656 660 4.333649 CGTTGTACTGCCATGATTGAAGAT 59.666 41.667 0.00 0.00 0.00 2.40
657 661 3.684305 CGTTGTACTGCCATGATTGAAGA 59.316 43.478 0.00 0.00 0.00 2.87
658 662 3.684305 TCGTTGTACTGCCATGATTGAAG 59.316 43.478 0.00 0.00 0.00 3.02
659 663 3.669536 TCGTTGTACTGCCATGATTGAA 58.330 40.909 0.00 0.00 0.00 2.69
660 664 3.326836 TCGTTGTACTGCCATGATTGA 57.673 42.857 0.00 0.00 0.00 2.57
661 665 3.188254 TGTTCGTTGTACTGCCATGATTG 59.812 43.478 0.00 0.00 0.00 2.67
662 666 3.407698 TGTTCGTTGTACTGCCATGATT 58.592 40.909 0.00 0.00 0.00 2.57
663 667 3.052455 TGTTCGTTGTACTGCCATGAT 57.948 42.857 0.00 0.00 0.00 2.45
664 668 2.535012 TGTTCGTTGTACTGCCATGA 57.465 45.000 0.00 0.00 0.00 3.07
665 669 2.741517 TGATGTTCGTTGTACTGCCATG 59.258 45.455 0.00 0.00 0.00 3.66
666 670 3.002791 CTGATGTTCGTTGTACTGCCAT 58.997 45.455 0.00 0.00 0.00 4.40
667 671 2.036604 TCTGATGTTCGTTGTACTGCCA 59.963 45.455 0.00 0.00 0.00 4.92
668 672 2.683968 TCTGATGTTCGTTGTACTGCC 58.316 47.619 0.00 0.00 0.00 4.85
669 673 4.725556 TTTCTGATGTTCGTTGTACTGC 57.274 40.909 0.00 0.00 0.00 4.40
670 674 9.658475 TTTTTATTTCTGATGTTCGTTGTACTG 57.342 29.630 0.00 0.00 0.00 2.74
704 708 2.636830 CAGCTTTACCCAGTGGATCTG 58.363 52.381 11.95 4.51 43.27 2.90
705 709 1.065126 GCAGCTTTACCCAGTGGATCT 60.065 52.381 11.95 0.00 34.81 2.75
706 710 1.383523 GCAGCTTTACCCAGTGGATC 58.616 55.000 11.95 0.00 34.81 3.36
707 711 0.392998 CGCAGCTTTACCCAGTGGAT 60.393 55.000 11.95 0.00 34.81 3.41
708 712 1.003839 CGCAGCTTTACCCAGTGGA 60.004 57.895 11.95 0.00 34.81 4.02
709 713 1.302511 ACGCAGCTTTACCCAGTGG 60.303 57.895 0.63 0.63 37.80 4.00
710 714 0.884704 ACACGCAGCTTTACCCAGTG 60.885 55.000 0.00 0.00 0.00 3.66
711 715 0.179029 AACACGCAGCTTTACCCAGT 60.179 50.000 0.00 0.00 0.00 4.00
712 716 1.732259 CTAACACGCAGCTTTACCCAG 59.268 52.381 0.00 0.00 0.00 4.45
713 717 1.071071 ACTAACACGCAGCTTTACCCA 59.929 47.619 0.00 0.00 0.00 4.51
714 718 1.804601 ACTAACACGCAGCTTTACCC 58.195 50.000 0.00 0.00 0.00 3.69
715 719 3.367025 CAGTACTAACACGCAGCTTTACC 59.633 47.826 0.00 0.00 0.00 2.85
716 720 3.181533 GCAGTACTAACACGCAGCTTTAC 60.182 47.826 0.00 0.00 0.00 2.01
717 721 2.991190 GCAGTACTAACACGCAGCTTTA 59.009 45.455 0.00 0.00 0.00 1.85
718 722 1.798813 GCAGTACTAACACGCAGCTTT 59.201 47.619 0.00 0.00 0.00 3.51
719 723 1.000955 AGCAGTACTAACACGCAGCTT 59.999 47.619 0.00 0.00 0.00 3.74
720 724 0.603569 AGCAGTACTAACACGCAGCT 59.396 50.000 0.00 0.00 0.00 4.24
721 725 1.429463 AAGCAGTACTAACACGCAGC 58.571 50.000 0.00 0.00 0.00 5.25
722 726 3.057019 TCAAAGCAGTACTAACACGCAG 58.943 45.455 0.00 0.00 0.00 5.18
723 727 3.100658 TCAAAGCAGTACTAACACGCA 57.899 42.857 0.00 0.00 0.00 5.24
724 728 3.181520 CCATCAAAGCAGTACTAACACGC 60.182 47.826 0.00 0.00 0.00 5.34
725 729 4.242475 TCCATCAAAGCAGTACTAACACG 58.758 43.478 0.00 0.00 0.00 4.49
726 730 5.874810 TCATCCATCAAAGCAGTACTAACAC 59.125 40.000 0.00 0.00 0.00 3.32
727 731 6.048732 TCATCCATCAAAGCAGTACTAACA 57.951 37.500 0.00 0.00 0.00 2.41
728 732 6.457528 GCTTCATCCATCAAAGCAGTACTAAC 60.458 42.308 0.00 0.00 43.77 2.34
729 733 5.586243 GCTTCATCCATCAAAGCAGTACTAA 59.414 40.000 0.00 0.00 43.77 2.24
730 734 5.118990 GCTTCATCCATCAAAGCAGTACTA 58.881 41.667 0.00 0.00 43.77 1.82
731 735 3.944015 GCTTCATCCATCAAAGCAGTACT 59.056 43.478 0.00 0.00 43.77 2.73
732 736 4.284378 GCTTCATCCATCAAAGCAGTAC 57.716 45.455 1.68 0.00 43.77 2.73
737 741 3.015327 ACTCTGCTTCATCCATCAAAGC 58.985 45.455 0.00 0.00 44.41 3.51
738 742 3.626670 GGACTCTGCTTCATCCATCAAAG 59.373 47.826 0.00 0.00 0.00 2.77
739 743 3.009363 TGGACTCTGCTTCATCCATCAAA 59.991 43.478 0.00 0.00 36.30 2.69
740 744 2.573009 TGGACTCTGCTTCATCCATCAA 59.427 45.455 0.00 0.00 36.30 2.57
741 745 2.169978 CTGGACTCTGCTTCATCCATCA 59.830 50.000 0.00 0.00 40.43 3.07
742 746 2.433604 TCTGGACTCTGCTTCATCCATC 59.566 50.000 0.00 0.00 40.43 3.51
743 747 2.435069 CTCTGGACTCTGCTTCATCCAT 59.565 50.000 0.00 0.00 40.43 3.41
744 748 1.829849 CTCTGGACTCTGCTTCATCCA 59.170 52.381 0.00 0.00 38.94 3.41
745 749 1.138661 CCTCTGGACTCTGCTTCATCC 59.861 57.143 0.00 0.00 0.00 3.51
746 750 2.101249 CTCCTCTGGACTCTGCTTCATC 59.899 54.545 0.00 0.00 0.00 2.92
747 751 2.109774 CTCCTCTGGACTCTGCTTCAT 58.890 52.381 0.00 0.00 0.00 2.57
748 752 1.203112 ACTCCTCTGGACTCTGCTTCA 60.203 52.381 0.00 0.00 0.00 3.02
749 753 1.555967 ACTCCTCTGGACTCTGCTTC 58.444 55.000 0.00 0.00 0.00 3.86
750 754 2.909504 TACTCCTCTGGACTCTGCTT 57.090 50.000 0.00 0.00 0.00 3.91
751 755 2.909504 TTACTCCTCTGGACTCTGCT 57.090 50.000 0.00 0.00 0.00 4.24
752 756 2.763448 ACATTACTCCTCTGGACTCTGC 59.237 50.000 0.00 0.00 0.00 4.26
753 757 3.430098 GCACATTACTCCTCTGGACTCTG 60.430 52.174 0.00 0.00 0.00 3.35
754 758 2.763448 GCACATTACTCCTCTGGACTCT 59.237 50.000 0.00 0.00 0.00 3.24
755 759 2.497675 TGCACATTACTCCTCTGGACTC 59.502 50.000 0.00 0.00 0.00 3.36
756 760 2.540383 TGCACATTACTCCTCTGGACT 58.460 47.619 0.00 0.00 0.00 3.85
757 761 3.550437 ATGCACATTACTCCTCTGGAC 57.450 47.619 0.00 0.00 0.00 4.02
758 762 6.127619 CGATATATGCACATTACTCCTCTGGA 60.128 42.308 0.00 0.00 0.00 3.86
759 763 6.038985 CGATATATGCACATTACTCCTCTGG 58.961 44.000 0.00 0.00 0.00 3.86
760 764 6.856895 TCGATATATGCACATTACTCCTCTG 58.143 40.000 0.00 0.00 0.00 3.35
761 765 7.316640 GTTCGATATATGCACATTACTCCTCT 58.683 38.462 0.00 0.00 0.00 3.69
762 766 6.531948 GGTTCGATATATGCACATTACTCCTC 59.468 42.308 0.00 0.00 0.00 3.71
763 767 6.014584 TGGTTCGATATATGCACATTACTCCT 60.015 38.462 0.00 0.00 0.00 3.69
764 768 6.163476 TGGTTCGATATATGCACATTACTCC 58.837 40.000 0.00 0.00 0.00 3.85
765 769 7.834068 ATGGTTCGATATATGCACATTACTC 57.166 36.000 0.00 0.00 0.00 2.59
783 787 5.054390 TGATAAACGAGCCAAAATGGTTC 57.946 39.130 3.41 3.41 43.33 3.62
827 831 1.598685 CAACCCCCTGCGTTAACGT 60.599 57.895 27.28 4.55 42.22 3.99
828 832 1.598685 ACAACCCCCTGCGTTAACG 60.599 57.895 23.40 23.40 43.27 3.18
829 833 0.820482 ACACAACCCCCTGCGTTAAC 60.820 55.000 0.00 0.00 0.00 2.01
843 847 2.363306 AATGCTTCTGTCCCACACAA 57.637 45.000 0.00 0.00 33.31 3.33
845 849 5.065218 CACTATAAATGCTTCTGTCCCACAC 59.935 44.000 0.00 0.00 0.00 3.82
846 850 5.185454 CACTATAAATGCTTCTGTCCCACA 58.815 41.667 0.00 0.00 0.00 4.17
847 851 5.186198 ACACTATAAATGCTTCTGTCCCAC 58.814 41.667 0.00 0.00 0.00 4.61
848 852 5.435686 ACACTATAAATGCTTCTGTCCCA 57.564 39.130 0.00 0.00 0.00 4.37
849 853 6.583562 ACTACACTATAAATGCTTCTGTCCC 58.416 40.000 0.00 0.00 0.00 4.46
870 900 4.406326 TGTTCCACACTGTTCCAAGTACTA 59.594 41.667 0.00 0.00 0.00 1.82
875 905 2.643551 ACTGTTCCACACTGTTCCAAG 58.356 47.619 0.00 0.00 33.96 3.61
877 907 2.484770 GCTACTGTTCCACACTGTTCCA 60.485 50.000 0.00 0.00 38.45 3.53
878 908 2.143925 GCTACTGTTCCACACTGTTCC 58.856 52.381 0.00 0.00 38.45 3.62
879 909 2.802816 CAGCTACTGTTCCACACTGTTC 59.197 50.000 0.00 0.00 38.45 3.18
880 910 2.838736 CAGCTACTGTTCCACACTGTT 58.161 47.619 0.00 0.00 38.45 3.16
881 911 1.541233 GCAGCTACTGTTCCACACTGT 60.541 52.381 0.00 0.00 40.47 3.55
882 912 1.151668 GCAGCTACTGTTCCACACTG 58.848 55.000 0.00 0.00 33.43 3.66
883 913 0.035458 GGCAGCTACTGTTCCACACT 59.965 55.000 0.00 0.00 33.43 3.55
884 914 0.035458 AGGCAGCTACTGTTCCACAC 59.965 55.000 0.00 0.00 33.43 3.82
885 915 0.321671 GAGGCAGCTACTGTTCCACA 59.678 55.000 0.00 0.00 33.43 4.17
886 916 0.737715 CGAGGCAGCTACTGTTCCAC 60.738 60.000 0.00 0.00 33.43 4.02
933 963 0.106217 GTGGGAGGGAGAGAGGAGAG 60.106 65.000 0.00 0.00 0.00 3.20
945 981 0.325671 TTCTAGCAGGAGGTGGGAGG 60.326 60.000 0.00 0.00 0.00 4.30
1283 1366 3.374402 ACCGAGAGCGAGTGTGGG 61.374 66.667 0.00 0.00 40.82 4.61
1328 1411 1.697432 TGAGGAAAAGGAAAGAGCGGA 59.303 47.619 0.00 0.00 0.00 5.54
1329 1412 2.185004 TGAGGAAAAGGAAAGAGCGG 57.815 50.000 0.00 0.00 0.00 5.52
1330 1413 3.403038 TCTTGAGGAAAAGGAAAGAGCG 58.597 45.455 0.00 0.00 0.00 5.03
1331 1414 5.066593 TCTTCTTGAGGAAAAGGAAAGAGC 58.933 41.667 0.00 0.00 33.07 4.09
1333 1416 6.488006 CACATCTTCTTGAGGAAAAGGAAAGA 59.512 38.462 0.00 0.00 33.07 2.52
1334 1417 6.675987 CACATCTTCTTGAGGAAAAGGAAAG 58.324 40.000 0.00 0.00 33.07 2.62
1335 1418 5.010012 GCACATCTTCTTGAGGAAAAGGAAA 59.990 40.000 0.00 0.00 33.07 3.13
1336 1419 4.520492 GCACATCTTCTTGAGGAAAAGGAA 59.480 41.667 0.00 0.00 33.07 3.36
1337 1420 4.074970 GCACATCTTCTTGAGGAAAAGGA 58.925 43.478 0.00 0.00 33.07 3.36
1338 1421 4.077822 AGCACATCTTCTTGAGGAAAAGG 58.922 43.478 0.00 0.00 33.07 3.11
1339 1422 4.758674 TCAGCACATCTTCTTGAGGAAAAG 59.241 41.667 0.00 0.00 33.07 2.27
1340 1423 4.717877 TCAGCACATCTTCTTGAGGAAAA 58.282 39.130 0.00 0.00 33.07 2.29
1341 1424 4.356405 TCAGCACATCTTCTTGAGGAAA 57.644 40.909 0.00 0.00 33.07 3.13
1534 1620 4.631740 TGGGGCACTCGGTCCTGA 62.632 66.667 0.00 0.00 42.62 3.86
1892 1978 0.883833 GGTTGACCCACATCTTGCAG 59.116 55.000 0.00 0.00 0.00 4.41
2201 2541 6.007076 TCTGCTAATAAACATCACCCAAACA 58.993 36.000 0.00 0.00 0.00 2.83
2256 2605 7.088905 ACGACATTAAAGTTGACTACTAGGTG 58.911 38.462 5.10 0.00 35.54 4.00
2288 2640 6.681729 ATCCTCGGATTTAAATAGCCTACA 57.318 37.500 0.00 0.00 0.00 2.74
2291 2643 9.892130 CTTAATATCCTCGGATTTAAATAGCCT 57.108 33.333 3.41 0.00 36.17 4.58
2292 2644 8.613482 GCTTAATATCCTCGGATTTAAATAGCC 58.387 37.037 3.41 0.00 36.17 3.93
2293 2645 9.384764 AGCTTAATATCCTCGGATTTAAATAGC 57.615 33.333 3.41 2.00 36.17 2.97
2369 2730 5.453648 GCAAATGAAATGCTTGCAAATTGA 58.546 33.333 0.00 0.00 43.89 2.57
2419 2780 3.785364 AGGGAGCTCTACTCTTGACTTT 58.215 45.455 14.64 0.00 45.48 2.66
2452 2901 7.450014 TCATACATAGAGAAGACTTGGGAGATC 59.550 40.741 0.00 0.00 0.00 2.75
2545 2997 4.771577 AGACTCTGAGAGAAGCTTCATCAA 59.228 41.667 27.57 17.70 33.32 2.57
2671 3181 5.106515 GGAACTTCTATCAAAGTCCTGCAAC 60.107 44.000 0.00 0.00 38.52 4.17
2685 3195 1.486726 CTTGGCCTCCGGAACTTCTAT 59.513 52.381 5.23 0.00 0.00 1.98
2717 3227 5.352569 CGAAGAAATCAGCAAAGTAGGATGT 59.647 40.000 0.00 0.00 0.00 3.06
2783 3314 4.400567 AGCCATAAGACTTTTGATCCTTGC 59.599 41.667 7.17 1.76 0.00 4.01
2787 3318 7.807977 TTATGAGCCATAAGACTTTTGATCC 57.192 36.000 7.17 0.00 32.27 3.36
2791 3322 7.646922 GCAAGATTATGAGCCATAAGACTTTTG 59.353 37.037 17.05 0.00 39.28 2.44
2797 3328 7.966812 TCTTAGCAAGATTATGAGCCATAAGA 58.033 34.615 11.59 0.00 39.28 2.10
2798 3329 8.613060 TTCTTAGCAAGATTATGAGCCATAAG 57.387 34.615 11.59 0.00 39.28 1.73
2799 3330 8.978874 TTTCTTAGCAAGATTATGAGCCATAA 57.021 30.769 9.23 9.23 40.04 1.90
2939 3905 6.127338 TGTTATTAGCAGTCTGAGCAGTGTAT 60.127 38.462 3.32 0.00 0.00 2.29
2968 3934 1.089920 CCATCCCTCAAAGCTCAACG 58.910 55.000 0.00 0.00 0.00 4.10
2999 3969 6.147437 AGTCACTATTTATTTTGTGGGGGA 57.853 37.500 0.00 0.00 0.00 4.81


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.