Multiple sequence alignment - TraesCS3B01G053800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G053800 chr3B 100.000 5222 0 0 1 5222 27515725 27520946 0.000000e+00 9644.0
1 TraesCS3B01G053800 chr3B 91.128 1285 101 9 3269 4546 24943724 24945002 0.000000e+00 1729.0
2 TraesCS3B01G053800 chr3B 83.810 1328 138 32 1038 2341 24941555 24942829 0.000000e+00 1190.0
3 TraesCS3B01G053800 chr3B 80.179 782 82 36 2459 3212 24942982 24943718 7.750000e-143 518.0
4 TraesCS3B01G053800 chr3B 83.832 167 24 3 635 800 24941205 24941369 7.000000e-34 156.0
5 TraesCS3B01G053800 chr3B 92.708 96 6 1 818 913 24941430 24941524 2.540000e-28 137.0
6 TraesCS3B01G053800 chr3B 85.915 71 9 1 451 520 771798706 771798776 2.020000e-09 75.0
7 TraesCS3B01G053800 chr3D 91.442 2676 159 36 2119 4756 17515707 17513064 0.000000e+00 3609.0
8 TraesCS3B01G053800 chr3D 89.080 2097 200 23 2459 4546 17376007 17378083 0.000000e+00 2577.0
9 TraesCS3B01G053800 chr3D 88.109 1581 137 32 518 2073 17517266 17515712 0.000000e+00 1831.0
10 TraesCS3B01G053800 chr3D 82.659 1805 240 42 2451 4220 17643997 17642231 0.000000e+00 1531.0
11 TraesCS3B01G053800 chr3D 86.185 1426 152 25 2818 4220 11354285 11355688 0.000000e+00 1500.0
12 TraesCS3B01G053800 chr3D 82.892 1397 150 33 979 2341 17374360 17375701 0.000000e+00 1173.0
13 TraesCS3B01G053800 chr3D 81.222 1358 164 45 818 2127 17645542 17644228 0.000000e+00 1011.0
14 TraesCS3B01G053800 chr3D 90.253 277 11 5 180 452 17517528 17517264 1.080000e-91 348.0
15 TraesCS3B01G053800 chr3D 95.714 70 3 0 1 70 17521542 17521473 4.270000e-21 113.0
16 TraesCS3B01G053800 chr3D 79.221 154 23 5 635 786 17645750 17645604 1.200000e-16 99.0
17 TraesCS3B01G053800 chr3D 87.209 86 7 3 90 175 17517654 17517573 1.550000e-15 95.3
18 TraesCS3B01G053800 chr3D 93.548 62 4 0 4779 4840 17513065 17513004 5.570000e-15 93.5
19 TraesCS3B01G053800 chr3D 93.333 60 4 0 90 149 17519140 17519081 7.200000e-14 89.8
20 TraesCS3B01G053800 chr3D 85.542 83 7 4 451 530 567708629 567708549 1.210000e-11 82.4
21 TraesCS3B01G053800 chr3A 90.281 2418 180 23 2450 4837 19372987 19375379 0.000000e+00 3112.0
22 TraesCS3B01G053800 chr3A 88.087 2107 213 31 2450 4536 19473168 19471080 0.000000e+00 2466.0
23 TraesCS3B01G053800 chr3A 90.529 1626 108 26 727 2337 19371051 19372645 0.000000e+00 2108.0
24 TraesCS3B01G053800 chr3A 85.593 1527 176 25 2708 4220 25933997 25932501 0.000000e+00 1561.0
25 TraesCS3B01G053800 chr3A 89.588 970 99 2 3252 4220 19306923 19307891 0.000000e+00 1230.0
26 TraesCS3B01G053800 chr3A 82.143 1568 151 49 818 2340 19474949 19473466 0.000000e+00 1225.0
27 TraesCS3B01G053800 chr3A 83.805 1025 120 32 880 1877 25936347 25935342 0.000000e+00 931.0
28 TraesCS3B01G053800 chr3A 81.070 972 132 28 818 1767 19304173 19305114 0.000000e+00 728.0
29 TraesCS3B01G053800 chr3A 85.569 686 85 13 1059 1739 26396075 26396751 0.000000e+00 706.0
30 TraesCS3B01G053800 chr3A 79.217 741 111 29 2454 3175 19306097 19306813 4.730000e-130 475.0
31 TraesCS3B01G053800 chr3A 83.274 281 20 8 181 445 19370184 19370453 3.140000e-57 233.0
32 TraesCS3B01G053800 chr3A 87.500 120 12 2 635 752 19475169 19475051 9.120000e-28 135.0
33 TraesCS3B01G053800 chr3A 91.250 80 7 0 70 149 19370043 19370122 5.530000e-20 110.0
34 TraesCS3B01G053800 chr3A 90.741 54 5 0 716 769 25937018 25936965 7.250000e-09 73.1
35 TraesCS3B01G053800 chrUn 86.105 1353 159 20 2876 4220 354553156 354551825 0.000000e+00 1430.0
36 TraesCS3B01G053800 chrUn 82.386 1073 131 32 833 1877 37955651 37956693 0.000000e+00 881.0
37 TraesCS3B01G053800 chrUn 91.816 391 13 5 4835 5222 175470899 175471273 1.290000e-145 527.0
38 TraesCS3B01G053800 chr1A 93.651 378 18 3 4838 5213 97857077 97857450 1.270000e-155 560.0
39 TraesCS3B01G053800 chr5A 89.844 384 33 3 4838 5218 13437363 13437743 6.080000e-134 488.0
40 TraesCS3B01G053800 chr5A 89.767 215 15 5 5010 5218 706332388 706332601 8.620000e-68 268.0
41 TraesCS3B01G053800 chr4D 78.618 463 83 12 945 1395 479409538 479409080 5.110000e-75 292.0
42 TraesCS3B01G053800 chr4D 91.304 115 7 2 2338 2451 29833134 29833246 2.520000e-33 154.0
43 TraesCS3B01G053800 chr4D 90.517 116 9 1 2338 2453 34661577 34661690 9.060000e-33 152.0
44 TraesCS3B01G053800 chr2A 86.592 179 18 4 4880 5053 535839309 535839486 5.340000e-45 193.0
45 TraesCS3B01G053800 chr2A 84.211 76 8 3 451 525 585135353 585135425 2.610000e-08 71.3
46 TraesCS3B01G053800 chr2D 88.966 145 13 3 4840 4983 638338272 638338130 5.370000e-40 176.0
47 TraesCS3B01G053800 chr2D 90.756 119 9 1 2338 2456 387193745 387193861 1.950000e-34 158.0
48 TraesCS3B01G053800 chr5D 90.678 118 9 1 2341 2458 452678329 452678214 7.000000e-34 156.0
49 TraesCS3B01G053800 chr5D 82.143 84 9 4 450 528 498669755 498669837 3.370000e-07 67.6
50 TraesCS3B01G053800 chr6D 91.892 111 6 2 2341 2451 431160775 431160668 9.060000e-33 152.0
51 TraesCS3B01G053800 chr6D 86.486 74 5 3 451 520 13600226 13600154 5.610000e-10 76.8
52 TraesCS3B01G053800 chr7D 91.071 112 8 1 2341 2452 454079355 454079246 3.260000e-32 150.0
53 TraesCS3B01G053800 chr7D 84.337 83 7 3 451 527 184573356 184573438 5.610000e-10 76.8
54 TraesCS3B01G053800 chr2B 91.071 112 8 1 2341 2452 740563518 740563409 3.260000e-32 150.0
55 TraesCS3B01G053800 chr7A 88.372 129 8 5 2324 2451 187107812 187107690 1.170000e-31 148.0
56 TraesCS3B01G053800 chr7B 85.714 70 8 2 451 520 20032946 20033013 7.250000e-09 73.1
57 TraesCS3B01G053800 chr4A 85.135 74 7 2 451 520 621127581 621127654 7.250000e-09 73.1
58 TraesCS3B01G053800 chr1D 84.146 82 6 6 451 530 48193813 48193889 7.250000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G053800 chr3B 27515725 27520946 5221 False 9644.000000 9644 100.000000 1 5222 1 chr3B.!!$F1 5221
1 TraesCS3B01G053800 chr3B 24941205 24945002 3797 False 746.000000 1729 86.331400 635 4546 5 chr3B.!!$F3 3911
2 TraesCS3B01G053800 chr3D 17374360 17378083 3723 False 1875.000000 2577 85.986000 979 4546 2 chr3D.!!$F2 3567
3 TraesCS3B01G053800 chr3D 11354285 11355688 1403 False 1500.000000 1500 86.185000 2818 4220 1 chr3D.!!$F1 1402
4 TraesCS3B01G053800 chr3D 17513004 17521542 8538 True 882.800000 3609 91.372571 1 4840 7 chr3D.!!$R2 4839
5 TraesCS3B01G053800 chr3D 17642231 17645750 3519 True 880.333333 1531 81.034000 635 4220 3 chr3D.!!$R3 3585
6 TraesCS3B01G053800 chr3A 19370043 19375379 5336 False 1390.750000 3112 88.833500 70 4837 4 chr3A.!!$F3 4767
7 TraesCS3B01G053800 chr3A 19471080 19475169 4089 True 1275.333333 2466 85.910000 635 4536 3 chr3A.!!$R1 3901
8 TraesCS3B01G053800 chr3A 25932501 25937018 4517 True 855.033333 1561 86.713000 716 4220 3 chr3A.!!$R2 3504
9 TraesCS3B01G053800 chr3A 19304173 19307891 3718 False 811.000000 1230 83.291667 818 4220 3 chr3A.!!$F2 3402
10 TraesCS3B01G053800 chr3A 26396075 26396751 676 False 706.000000 706 85.569000 1059 1739 1 chr3A.!!$F1 680
11 TraesCS3B01G053800 chrUn 354551825 354553156 1331 True 1430.000000 1430 86.105000 2876 4220 1 chrUn.!!$R1 1344
12 TraesCS3B01G053800 chrUn 37955651 37956693 1042 False 881.000000 881 82.386000 833 1877 1 chrUn.!!$F1 1044

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
918 5663 0.041312 CGTTCTGTCCCGTTGCTTTG 60.041 55.000 0.0 0.0 0.00 2.77 F
919 5664 0.317854 GTTCTGTCCCGTTGCTTTGC 60.318 55.000 0.0 0.0 0.00 3.68 F
920 5665 0.465460 TTCTGTCCCGTTGCTTTGCT 60.465 50.000 0.0 0.0 0.00 3.91 F
1491 6289 1.204146 ACGGCACCCATCTTGACTAT 58.796 50.000 0.0 0.0 0.00 2.12 F
2017 6966 1.341209 GTGCTTCCTTGGTTTCTTGGG 59.659 52.381 0.0 0.0 0.00 4.12 F
3568 9441 0.106708 AGAAACGGCTGAAGCACTGA 59.893 50.000 0.0 0.0 44.36 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2223 7378 0.623723 AAATACAGACCGGGGCACAT 59.376 50.000 6.32 0.00 0.00 3.21 R
2314 7568 2.781681 ATCCACTGAAACTAACCCCG 57.218 50.000 0.00 0.00 0.00 5.73 R
2511 8232 4.392138 CGAACTCCCTTTTATGACTGGTTC 59.608 45.833 0.00 0.00 0.00 3.62 R
3408 9281 1.153647 CCGAGACGTGCAGCCATAA 60.154 57.895 0.00 0.00 0.00 1.90 R
3673 9546 0.472471 GTGACCTCCAGTGGGAACAA 59.528 55.000 9.92 0.00 44.38 2.83 R
4990 10903 0.034337 TTCCTTTCGGTCCGACCAAG 59.966 55.000 15.07 15.57 38.47 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 4.035558 TGCTGTTAGTCTCTGTTTTGCAAG 59.964 41.667 0.00 0.00 0.00 4.01
55 56 3.142174 GTTTTGCAAGGCAGAGTACTCT 58.858 45.455 20.00 20.00 40.61 3.24
67 68 2.490115 AGAGTACTCTCGCCTCTGTTTG 59.510 50.000 20.00 0.00 44.65 2.93
83 84 2.039418 GTTTGCTCCTTTTTGGACCCT 58.961 47.619 0.00 0.00 40.56 4.34
96 2410 1.764134 TGGACCCTGTAACTTCGTGTT 59.236 47.619 0.00 2.66 42.31 3.32
99 2413 3.992427 GGACCCTGTAACTTCGTGTTAAG 59.008 47.826 5.62 0.00 42.12 1.85
102 2416 4.812626 ACCCTGTAACTTCGTGTTAAGTTG 59.187 41.667 11.25 0.00 46.49 3.16
138 2452 2.306847 ACATGACACCTGGTTTTCACC 58.693 47.619 9.54 0.00 44.56 4.02
256 4092 2.851195 ACAAAGAGTACAAGTGGGCAG 58.149 47.619 0.00 0.00 0.00 4.85
276 4112 6.427242 GGGCAGAGTTTTATATTAGTAGCACC 59.573 42.308 0.00 0.00 0.00 5.01
282 4118 4.877378 TTATATTAGTAGCACCGGGTGG 57.123 45.455 27.41 10.40 42.84 4.61
283 4119 1.416243 TATTAGTAGCACCGGGTGGG 58.584 55.000 27.41 4.64 40.75 4.61
309 4165 6.100279 TGCTCATGAATTGGTAGTCCTAGAAT 59.900 38.462 0.00 0.00 34.23 2.40
321 4177 2.029200 GTCCTAGAATTAGCGTAGGGCC 60.029 54.545 0.00 0.00 45.17 5.80
381 4241 4.523168 AGCCTAGCTTGGTACTAGTAGT 57.477 45.455 15.85 8.14 33.89 2.73
382 4242 4.463070 AGCCTAGCTTGGTACTAGTAGTC 58.537 47.826 15.85 0.00 33.89 2.59
447 4307 1.617850 TGGTGCCATTTGGTGTCAATC 59.382 47.619 0.00 0.00 37.57 2.67
449 4309 0.887247 TGCCATTTGGTGTCAATCGG 59.113 50.000 0.00 0.00 37.57 4.18
450 4310 0.887933 GCCATTTGGTGTCAATCGGT 59.112 50.000 0.00 0.00 37.57 4.69
451 4311 2.088423 GCCATTTGGTGTCAATCGGTA 58.912 47.619 0.00 0.00 37.57 4.02
454 4314 4.509616 CCATTTGGTGTCAATCGGTACTA 58.490 43.478 0.00 0.00 32.28 1.82
456 4316 4.877378 TTTGGTGTCAATCGGTACTACT 57.123 40.909 0.00 0.00 32.28 2.57
457 4317 4.445452 TTGGTGTCAATCGGTACTACTC 57.555 45.455 0.00 0.00 0.00 2.59
458 4318 2.756760 TGGTGTCAATCGGTACTACTCC 59.243 50.000 0.00 0.00 0.00 3.85
462 4322 2.622470 GTCAATCGGTACTACTCCCTCC 59.378 54.545 0.00 0.00 0.00 4.30
463 4323 1.607628 CAATCGGTACTACTCCCTCCG 59.392 57.143 0.00 0.00 42.12 4.63
464 4324 0.842635 ATCGGTACTACTCCCTCCGT 59.157 55.000 0.00 0.00 41.58 4.69
465 4325 0.179000 TCGGTACTACTCCCTCCGTC 59.821 60.000 0.00 0.00 41.58 4.79
469 4329 1.133544 GTACTACTCCCTCCGTCCCAT 60.134 57.143 0.00 0.00 0.00 4.00
470 4330 1.229131 ACTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
471 4331 1.572415 ACTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
473 4333 3.400322 ACTACTCCCTCCGTCCCATAATA 59.600 47.826 0.00 0.00 0.00 0.98
474 4334 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
476 4336 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
477 4337 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
478 4338 5.019657 TCCCTCCGTCCCATAATATAAGT 57.980 43.478 0.00 0.00 0.00 2.24
481 4341 4.174009 CTCCGTCCCATAATATAAGTGCG 58.826 47.826 0.00 0.00 0.00 5.34
482 4342 3.575256 TCCGTCCCATAATATAAGTGCGT 59.425 43.478 0.00 0.00 0.00 5.24
483 4343 4.039488 TCCGTCCCATAATATAAGTGCGTT 59.961 41.667 0.00 0.00 0.00 4.84
485 4345 4.748102 CGTCCCATAATATAAGTGCGTTGT 59.252 41.667 0.00 0.00 0.00 3.32
486 4346 5.235616 CGTCCCATAATATAAGTGCGTTGTT 59.764 40.000 0.00 0.00 0.00 2.83
487 4347 6.427150 GTCCCATAATATAAGTGCGTTGTTG 58.573 40.000 0.00 0.00 0.00 3.33
488 4348 6.259167 GTCCCATAATATAAGTGCGTTGTTGA 59.741 38.462 0.00 0.00 0.00 3.18
489 4349 6.824196 TCCCATAATATAAGTGCGTTGTTGAA 59.176 34.615 0.00 0.00 0.00 2.69
490 4350 7.011950 TCCCATAATATAAGTGCGTTGTTGAAG 59.988 37.037 0.00 0.00 0.00 3.02
491 4351 7.201696 CCCATAATATAAGTGCGTTGTTGAAGT 60.202 37.037 0.00 0.00 0.00 3.01
492 4352 7.639850 CCATAATATAAGTGCGTTGTTGAAGTG 59.360 37.037 0.00 0.00 0.00 3.16
493 4353 2.748461 TAAGTGCGTTGTTGAAGTGC 57.252 45.000 0.00 0.00 0.00 4.40
497 4357 1.064060 GTGCGTTGTTGAAGTGCTCTT 59.936 47.619 0.00 0.00 36.51 2.85
498 4358 2.286833 GTGCGTTGTTGAAGTGCTCTTA 59.713 45.455 0.04 0.00 33.64 2.10
499 4359 3.058914 GTGCGTTGTTGAAGTGCTCTTAT 60.059 43.478 0.04 0.00 33.64 1.73
500 4360 4.151689 GTGCGTTGTTGAAGTGCTCTTATA 59.848 41.667 0.04 0.00 33.64 0.98
501 4361 4.935205 TGCGTTGTTGAAGTGCTCTTATAT 59.065 37.500 0.04 0.00 33.64 0.86
502 4362 5.063438 TGCGTTGTTGAAGTGCTCTTATATC 59.937 40.000 0.04 0.00 33.64 1.63
503 4363 5.063438 GCGTTGTTGAAGTGCTCTTATATCA 59.937 40.000 0.04 0.00 33.64 2.15
504 4364 6.470160 CGTTGTTGAAGTGCTCTTATATCAC 58.530 40.000 0.04 0.00 33.64 3.06
505 4365 6.470160 GTTGTTGAAGTGCTCTTATATCACG 58.530 40.000 0.04 0.00 35.97 4.35
507 4367 4.322080 TGAAGTGCTCTTATATCACGGG 57.678 45.455 0.04 0.00 35.97 5.28
509 4369 4.202121 TGAAGTGCTCTTATATCACGGGAC 60.202 45.833 0.04 0.00 35.97 4.46
510 4370 3.296854 AGTGCTCTTATATCACGGGACA 58.703 45.455 0.00 0.00 35.97 4.02
513 4373 3.570125 TGCTCTTATATCACGGGACAGAG 59.430 47.826 9.60 9.60 0.00 3.35
515 4375 3.497332 TCTTATATCACGGGACAGAGGG 58.503 50.000 0.00 0.00 0.00 4.30
516 4376 3.139584 TCTTATATCACGGGACAGAGGGA 59.860 47.826 0.00 0.00 0.00 4.20
569 4429 2.816087 ACACTCGTATTGTCGTAGGTGT 59.184 45.455 0.00 0.00 36.42 4.16
627 4487 5.114081 GGTTTACTAGTCCGTGCATACATT 58.886 41.667 0.00 0.00 0.00 2.71
666 4722 9.697250 TCGTGAAATTAATCATTTTGTATCGAC 57.303 29.630 0.00 0.00 35.02 4.20
695 4751 4.018050 AGGAACCAAACAATCTAGCCTCAT 60.018 41.667 0.00 0.00 0.00 2.90
701 4889 5.180117 CCAAACAATCTAGCCTCATATTCCG 59.820 44.000 0.00 0.00 0.00 4.30
703 4891 3.580458 ACAATCTAGCCTCATATTCCGCT 59.420 43.478 0.00 0.00 35.34 5.52
722 4910 1.243342 TTCTGCCGGACCATGCAAAG 61.243 55.000 5.05 0.00 36.98 2.77
916 5661 1.597027 CCGTTCTGTCCCGTTGCTT 60.597 57.895 0.00 0.00 0.00 3.91
917 5662 1.164041 CCGTTCTGTCCCGTTGCTTT 61.164 55.000 0.00 0.00 0.00 3.51
918 5663 0.041312 CGTTCTGTCCCGTTGCTTTG 60.041 55.000 0.00 0.00 0.00 2.77
919 5664 0.317854 GTTCTGTCCCGTTGCTTTGC 60.318 55.000 0.00 0.00 0.00 3.68
920 5665 0.465460 TTCTGTCCCGTTGCTTTGCT 60.465 50.000 0.00 0.00 0.00 3.91
936 5683 4.154375 GCTTTGCTCCTCCTTGTTAACTAC 59.846 45.833 7.22 0.00 0.00 2.73
937 5684 5.552178 CTTTGCTCCTCCTTGTTAACTACT 58.448 41.667 7.22 0.00 0.00 2.57
938 5685 6.675413 TTTGCTCCTCCTTGTTAACTACTA 57.325 37.500 7.22 0.00 0.00 1.82
1033 5792 1.394151 CCCCTCCTCCTCCTTCTGT 59.606 63.158 0.00 0.00 0.00 3.41
1035 5794 1.662686 CCCTCCTCCTCCTTCTGTTT 58.337 55.000 0.00 0.00 0.00 2.83
1044 5806 4.746466 TCCTCCTTCTGTTTCTCTCTTCT 58.254 43.478 0.00 0.00 0.00 2.85
1146 5911 2.283529 GGAGGAGAACGGCCAGACA 61.284 63.158 2.24 0.00 0.00 3.41
1367 6144 3.930336 TCGTCATCAGCAAGAAGAACAT 58.070 40.909 0.00 0.00 0.00 2.71
1491 6289 1.204146 ACGGCACCCATCTTGACTAT 58.796 50.000 0.00 0.00 0.00 2.12
1742 6543 6.018180 GGTGAGTTGACGAAAATTAACTGACT 60.018 38.462 0.00 0.00 37.40 3.41
1809 6625 2.496899 AATCCGTTGCTGACATTCCT 57.503 45.000 0.00 0.00 0.00 3.36
1826 6651 4.900635 TTCCTCTCAAAACTTCAAGTGC 57.099 40.909 0.00 0.00 0.00 4.40
1843 6668 3.353557 AGTGCTAGTGACCGATTCAGTA 58.646 45.455 0.00 0.00 38.88 2.74
1890 6795 6.206243 GGTAGCAATTTGATACTGCATCTGAT 59.794 38.462 20.60 0.00 39.08 2.90
1951 6863 2.362397 TCGCTGTTGCTAGGAGGATTAG 59.638 50.000 0.00 0.00 36.97 1.73
1956 6868 5.596845 CTGTTGCTAGGAGGATTAGAGAAC 58.403 45.833 0.00 0.00 0.00 3.01
1957 6869 5.023452 TGTTGCTAGGAGGATTAGAGAACA 58.977 41.667 0.00 0.00 0.00 3.18
1959 6871 3.961408 TGCTAGGAGGATTAGAGAACACC 59.039 47.826 0.00 0.00 0.00 4.16
2003 6952 5.065218 TGTTCTTTCAACTCTTGAGTGCTTC 59.935 40.000 3.87 0.00 41.38 3.86
2017 6966 1.341209 GTGCTTCCTTGGTTTCTTGGG 59.659 52.381 0.00 0.00 0.00 4.12
2021 6970 1.451449 TCCTTGGTTTCTTGGGGCTA 58.549 50.000 0.00 0.00 0.00 3.93
2022 6971 2.000048 TCCTTGGTTTCTTGGGGCTAT 59.000 47.619 0.00 0.00 0.00 2.97
2024 6973 3.594232 TCCTTGGTTTCTTGGGGCTATTA 59.406 43.478 0.00 0.00 0.00 0.98
2026 6975 4.569865 CCTTGGTTTCTTGGGGCTATTACT 60.570 45.833 0.00 0.00 0.00 2.24
2113 7254 6.470235 CGATTCCTAGTCAAAATGCATTTGTC 59.530 38.462 24.74 16.76 46.89 3.18
2196 7338 6.442541 TTTGTTCCAAGTAGACTATTCCCA 57.557 37.500 0.00 0.00 0.00 4.37
2223 7378 4.270084 CGCCGATCAATGCTCTTACTTTTA 59.730 41.667 0.00 0.00 0.00 1.52
2231 7386 3.352648 TGCTCTTACTTTTATGTGCCCC 58.647 45.455 0.00 0.00 0.00 5.80
2394 7711 4.997395 TGTAGACTCACTCATTTTGCTTCC 59.003 41.667 0.00 0.00 0.00 3.46
2411 7728 3.812053 GCTTCCTATGTAGTCAGCATTGG 59.188 47.826 0.00 0.00 39.46 3.16
2511 8232 5.649782 ACTGTTGCTGGATTTTCCTAATG 57.350 39.130 0.00 0.00 37.46 1.90
2521 8242 6.493166 TGGATTTTCCTAATGAACCAGTCAT 58.507 36.000 0.00 0.00 42.41 3.06
2620 8355 7.896811 TCTCATTTGTCAAGTGACTACTACAT 58.103 34.615 12.43 0.00 44.99 2.29
2764 8545 2.684881 CCATCCATTCCTTCGGTTCTTG 59.315 50.000 0.00 0.00 0.00 3.02
2785 8567 5.860941 TGTTTCCTTGCTCCAAATTGTAA 57.139 34.783 0.00 0.00 0.00 2.41
2867 8675 4.163458 TGCTTCATGTTGCTAATGTGTG 57.837 40.909 12.28 0.00 0.00 3.82
2956 8786 6.183360 GCTTTATACCAACGAAAGAAGAGCAT 60.183 38.462 0.00 0.00 32.94 3.79
2983 8813 4.716943 GCTGTAGCTTCAAATGAGTTCAC 58.283 43.478 0.00 0.00 38.21 3.18
3158 8988 1.833860 AAACACATGTTTGCCGAACG 58.166 45.000 9.16 0.00 45.55 3.95
3219 9080 4.322650 GGAGCTCTGTTCTCAAGTCTCAAT 60.323 45.833 14.64 0.00 32.38 2.57
3261 9134 9.209175 AGTTATCAACTTAGACAATGACAACTC 57.791 33.333 0.00 0.00 35.29 3.01
3291 9164 8.881743 CATTTTTGTCATTCAGGAAAACTCAAA 58.118 29.630 0.00 0.00 0.00 2.69
3312 9185 3.982516 AGATGGGAGAGTAGTTGCAGTA 58.017 45.455 0.00 0.00 0.00 2.74
3321 9194 3.064931 AGTAGTTGCAGTAAAACGCCTC 58.935 45.455 0.00 0.00 32.65 4.70
3324 9197 3.939066 AGTTGCAGTAAAACGCCTCTAT 58.061 40.909 0.00 0.00 32.65 1.98
3369 9242 2.166664 GCAGTTCCTGAACGAGGTAGAT 59.833 50.000 4.49 0.00 45.50 1.98
3408 9281 2.965147 CCACCAAAACCTTGTCATCCTT 59.035 45.455 0.00 0.00 0.00 3.36
3432 9305 1.508545 CTGCACGTCTCGGATGAGT 59.491 57.895 0.00 0.00 43.09 3.41
3442 9315 2.014857 CTCGGATGAGTCGTGACCTTA 58.985 52.381 0.00 0.00 37.46 2.69
3500 9373 1.123928 GACCATCTTCACGGATCCCT 58.876 55.000 6.06 0.00 0.00 4.20
3507 9380 1.832719 TTCACGGATCCCTTTCGGCA 61.833 55.000 6.06 0.00 0.00 5.69
3508 9381 1.376683 CACGGATCCCTTTCGGCAA 60.377 57.895 6.06 0.00 0.00 4.52
3535 9408 1.270414 CCTCACATGGCCTCTGAGGT 61.270 60.000 24.96 2.39 44.28 3.85
3568 9441 0.106708 AGAAACGGCTGAAGCACTGA 59.893 50.000 0.00 0.00 44.36 3.41
3673 9546 2.203153 ACTTTGGGTTGTCGCGCT 60.203 55.556 5.56 0.00 0.00 5.92
3684 9557 2.664851 TCGCGCTTGTTCCCACTG 60.665 61.111 5.56 0.00 0.00 3.66
3702 9575 0.909610 TGGAGGTCACCCATGTCTCC 60.910 60.000 0.00 0.00 42.44 3.71
3786 9659 3.305403 CCGACAAGAGTGATGTGTACAGT 60.305 47.826 0.00 0.00 0.00 3.55
3864 9737 1.701847 AGCCACAGTGAGATCAACCTT 59.298 47.619 0.62 0.00 0.00 3.50
3903 9776 4.583871 ACAGGATTCAGAACCATGAAGTC 58.416 43.478 0.00 0.00 42.20 3.01
3919 9792 4.196193 TGAAGTCGTTCAGTTGGTTGATT 58.804 39.130 0.00 0.00 37.79 2.57
4044 9917 2.044793 TCAAGGAGGTGGTGGAGATT 57.955 50.000 0.00 0.00 0.00 2.40
4136 10012 1.386533 CACTTGCTCATGGATGACCC 58.613 55.000 0.00 0.00 34.81 4.46
4188 10064 6.506538 AGATTCCATAGCCAGTCAACTAAT 57.493 37.500 0.00 0.00 0.00 1.73
4189 10065 7.618019 AGATTCCATAGCCAGTCAACTAATA 57.382 36.000 0.00 0.00 0.00 0.98
4229 10105 1.668419 AGCGGGTTATGATGTGCTTC 58.332 50.000 0.00 0.00 0.00 3.86
4255 10131 7.012327 CGTATTGATTCTGAAGAAATAAGGCCA 59.988 37.037 5.01 0.00 37.61 5.36
4260 10140 4.108570 TCTGAAGAAATAAGGCCACCCTA 58.891 43.478 5.01 0.00 41.90 3.53
4263 10143 4.476846 TGAAGAAATAAGGCCACCCTATCA 59.523 41.667 5.01 0.00 41.90 2.15
4276 10156 4.444876 CCACCCTATCAATCGGATGAGTTT 60.445 45.833 0.00 0.00 36.72 2.66
4314 10194 3.877559 TGCTAATGAGGTGGTTCATCTG 58.122 45.455 0.00 0.00 36.81 2.90
4317 10200 3.356529 AATGAGGTGGTTCATCTGACC 57.643 47.619 0.00 0.00 36.81 4.02
4342 10225 1.283029 AGTACAGGCTCATGGTTGCAT 59.717 47.619 0.00 0.00 0.00 3.96
4399 10282 6.973460 AATGGTAGGTGTATGTACTAGGAC 57.027 41.667 0.00 0.00 0.00 3.85
4400 10283 5.455392 TGGTAGGTGTATGTACTAGGACA 57.545 43.478 11.02 11.02 0.00 4.02
4414 10297 8.331931 TGTACTAGGACAAAATTCCAGGATAT 57.668 34.615 4.94 0.00 38.25 1.63
4415 10298 9.442062 TGTACTAGGACAAAATTCCAGGATATA 57.558 33.333 4.94 0.00 38.25 0.86
4431 10314 8.683615 TCCAGGATATAAGCACTGTAATATACG 58.316 37.037 0.00 0.00 0.00 3.06
4432 10315 8.683615 CCAGGATATAAGCACTGTAATATACGA 58.316 37.037 0.00 0.00 0.00 3.43
4441 10324 8.942338 AGCACTGTAATATACGAAAAGATTGA 57.058 30.769 0.00 0.00 0.00 2.57
4442 10325 9.378551 AGCACTGTAATATACGAAAAGATTGAA 57.621 29.630 0.00 0.00 0.00 2.69
4570 10462 5.768164 TGAGATACTTACGGCAGATACATCA 59.232 40.000 0.00 0.00 0.00 3.07
4576 10468 3.103447 ACGGCAGATACATCATGTGAG 57.897 47.619 0.00 0.00 29.21 3.51
4602 10494 0.307760 GGTCTGTTTGGCAGTTGTCG 59.692 55.000 0.00 0.00 45.23 4.35
4608 10500 5.121768 GTCTGTTTGGCAGTTGTCGTATATT 59.878 40.000 0.00 0.00 45.23 1.28
4609 10501 5.121611 TCTGTTTGGCAGTTGTCGTATATTG 59.878 40.000 0.00 0.00 45.23 1.90
4610 10502 4.998033 TGTTTGGCAGTTGTCGTATATTGA 59.002 37.500 0.00 0.00 0.00 2.57
4611 10503 5.470437 TGTTTGGCAGTTGTCGTATATTGAA 59.530 36.000 0.00 0.00 0.00 2.69
4614 10506 6.751514 TGGCAGTTGTCGTATATTGAAATT 57.248 33.333 0.00 0.00 0.00 1.82
4616 10508 7.247728 TGGCAGTTGTCGTATATTGAAATTTC 58.752 34.615 11.41 11.41 0.00 2.17
4617 10509 7.120579 TGGCAGTTGTCGTATATTGAAATTTCT 59.879 33.333 18.64 2.61 0.00 2.52
4618 10510 7.968405 GGCAGTTGTCGTATATTGAAATTTCTT 59.032 33.333 18.64 9.15 0.00 2.52
4619 10511 9.341899 GCAGTTGTCGTATATTGAAATTTCTTT 57.658 29.630 18.64 8.82 0.00 2.52
4663 10576 6.155827 CCAATGTATTGTACCACCAGTTTTG 58.844 40.000 4.12 0.00 36.06 2.44
4679 10592 1.723608 TTTGCTTGGTGTCAGCACGG 61.724 55.000 3.71 2.20 46.13 4.94
4694 10607 1.130561 GCACGGCAGGTACATTTTCTC 59.869 52.381 0.00 0.00 0.00 2.87
4697 10610 2.835764 ACGGCAGGTACATTTTCTCCTA 59.164 45.455 0.00 0.00 0.00 2.94
4715 10628 7.141758 TCTCCTAAAATCTGCATAAGGACAT 57.858 36.000 0.00 0.00 0.00 3.06
4721 10634 7.814264 AAAATCTGCATAAGGACATAAGAGG 57.186 36.000 0.00 0.00 0.00 3.69
4724 10637 4.039730 TCTGCATAAGGACATAAGAGGCTC 59.960 45.833 6.34 6.34 0.00 4.70
4726 10639 5.147767 TGCATAAGGACATAAGAGGCTCTA 58.852 41.667 19.07 6.79 0.00 2.43
4748 10661 3.015145 GGGACCAAGGCCCAGCTA 61.015 66.667 0.00 0.00 45.31 3.32
4793 10706 1.130955 CACGGTTGCTGCAAAATGTC 58.869 50.000 17.80 3.94 0.00 3.06
4837 10750 2.435693 GGCTATCACTCACCCGCCT 61.436 63.158 0.00 0.00 34.80 5.52
4840 10753 0.387202 CTATCACTCACCCGCCTCAG 59.613 60.000 0.00 0.00 0.00 3.35
4841 10754 1.043116 TATCACTCACCCGCCTCAGG 61.043 60.000 0.00 0.00 0.00 3.86
4842 10755 4.767255 CACTCACCCGCCTCAGGC 62.767 72.222 5.22 5.22 46.75 4.85
4851 10764 2.496817 GCCTCAGGCTGGACGTAG 59.503 66.667 15.73 3.79 46.69 3.51
4852 10765 2.496817 CCTCAGGCTGGACGTAGC 59.503 66.667 15.73 1.51 42.94 3.58
4853 10766 2.103143 CTCAGGCTGGACGTAGCG 59.897 66.667 15.73 0.00 44.60 4.26
4854 10767 2.360726 TCAGGCTGGACGTAGCGA 60.361 61.111 15.73 0.00 44.60 4.93
4855 10768 2.103143 CAGGCTGGACGTAGCGAG 59.897 66.667 6.61 0.00 44.60 5.03
4856 10769 3.827898 AGGCTGGACGTAGCGAGC 61.828 66.667 4.32 3.69 44.60 5.03
4859 10772 4.554363 CTGGACGTAGCGAGCGGG 62.554 72.222 0.00 0.00 0.00 6.13
4865 10778 2.744709 GTAGCGAGCGGGCCAAAA 60.745 61.111 4.39 0.00 0.00 2.44
4866 10779 2.032834 TAGCGAGCGGGCCAAAAA 59.967 55.556 4.39 0.00 0.00 1.94
4867 10780 2.038269 TAGCGAGCGGGCCAAAAAG 61.038 57.895 4.39 0.00 0.00 2.27
4876 10789 3.670377 GCCAAAAAGCCCGCTCGT 61.670 61.111 0.00 0.00 0.00 4.18
4877 10790 2.255252 CCAAAAAGCCCGCTCGTG 59.745 61.111 0.00 0.00 0.00 4.35
4878 10791 2.255252 CAAAAAGCCCGCTCGTGG 59.745 61.111 0.00 0.00 0.00 4.94
4879 10792 2.112297 AAAAAGCCCGCTCGTGGA 59.888 55.556 0.00 0.00 0.00 4.02
4880 10793 2.258726 AAAAAGCCCGCTCGTGGAC 61.259 57.895 0.00 0.00 0.00 4.02
4881 10794 4.699522 AAAGCCCGCTCGTGGACC 62.700 66.667 0.00 0.00 0.00 4.46
4903 10816 2.478746 CGCACCGGACCGAAATTG 59.521 61.111 17.49 7.88 0.00 2.32
4904 10817 2.874751 GCACCGGACCGAAATTGG 59.125 61.111 17.49 0.00 0.00 3.16
4905 10818 1.673009 GCACCGGACCGAAATTGGA 60.673 57.895 17.49 0.00 0.00 3.53
4906 10819 1.644786 GCACCGGACCGAAATTGGAG 61.645 60.000 17.49 0.00 0.00 3.86
4907 10820 1.024579 CACCGGACCGAAATTGGAGG 61.025 60.000 17.49 0.00 0.00 4.30
4908 10821 2.112815 CCGGACCGAAATTGGAGGC 61.113 63.158 17.49 0.00 0.00 4.70
4909 10822 2.112815 CGGACCGAAATTGGAGGCC 61.113 63.158 8.64 0.00 0.00 5.19
4910 10823 1.753078 GGACCGAAATTGGAGGCCC 60.753 63.158 0.00 0.00 0.00 5.80
4911 10824 2.045340 ACCGAAATTGGAGGCCCG 60.045 61.111 0.00 0.00 34.29 6.13
4912 10825 2.270850 CCGAAATTGGAGGCCCGA 59.729 61.111 0.00 0.00 34.29 5.14
4913 10826 2.112815 CCGAAATTGGAGGCCCGAC 61.113 63.158 0.00 0.00 34.29 4.79
4914 10827 1.376683 CGAAATTGGAGGCCCGACA 60.377 57.895 0.00 0.00 34.29 4.35
4915 10828 1.369091 CGAAATTGGAGGCCCGACAG 61.369 60.000 0.00 0.00 34.29 3.51
4916 10829 0.035439 GAAATTGGAGGCCCGACAGA 60.035 55.000 0.00 0.00 34.29 3.41
4917 10830 0.404040 AAATTGGAGGCCCGACAGAA 59.596 50.000 0.00 0.00 34.29 3.02
4918 10831 0.404040 AATTGGAGGCCCGACAGAAA 59.596 50.000 0.00 0.00 34.29 2.52
4919 10832 0.404040 ATTGGAGGCCCGACAGAAAA 59.596 50.000 0.00 0.00 34.29 2.29
4920 10833 0.404040 TTGGAGGCCCGACAGAAAAT 59.596 50.000 0.00 0.00 34.29 1.82
4921 10834 1.281419 TGGAGGCCCGACAGAAAATA 58.719 50.000 0.00 0.00 34.29 1.40
4922 10835 1.631388 TGGAGGCCCGACAGAAAATAA 59.369 47.619 0.00 0.00 34.29 1.40
4923 10836 2.014857 GGAGGCCCGACAGAAAATAAC 58.985 52.381 0.00 0.00 0.00 1.89
4924 10837 2.617021 GGAGGCCCGACAGAAAATAACA 60.617 50.000 0.00 0.00 0.00 2.41
4925 10838 2.678336 GAGGCCCGACAGAAAATAACAG 59.322 50.000 0.00 0.00 0.00 3.16
4926 10839 2.039879 AGGCCCGACAGAAAATAACAGT 59.960 45.455 0.00 0.00 0.00 3.55
4927 10840 2.418976 GGCCCGACAGAAAATAACAGTC 59.581 50.000 0.00 0.00 0.00 3.51
4931 10844 4.563524 CGACAGAAAATAACAGTCGGTC 57.436 45.455 0.00 0.00 45.81 4.79
4932 10845 3.367025 CGACAGAAAATAACAGTCGGTCC 59.633 47.826 0.00 0.00 45.81 4.46
4933 10846 3.323243 ACAGAAAATAACAGTCGGTCCG 58.677 45.455 4.39 4.39 0.00 4.79
4934 10847 2.671396 CAGAAAATAACAGTCGGTCCGG 59.329 50.000 12.29 0.00 0.00 5.14
4935 10848 2.301009 AGAAAATAACAGTCGGTCCGGT 59.699 45.455 12.29 0.00 0.00 5.28
4936 10849 2.375173 AAATAACAGTCGGTCCGGTC 57.625 50.000 12.29 5.36 0.00 4.79
4937 10850 1.553706 AATAACAGTCGGTCCGGTCT 58.446 50.000 12.29 7.73 0.00 3.85
4938 10851 0.815734 ATAACAGTCGGTCCGGTCTG 59.184 55.000 24.84 24.84 36.23 3.51
4939 10852 0.538057 TAACAGTCGGTCCGGTCTGT 60.538 55.000 25.79 25.79 41.01 3.41
4940 10853 0.538057 AACAGTCGGTCCGGTCTGTA 60.538 55.000 28.95 4.10 39.59 2.74
4941 10854 0.538057 ACAGTCGGTCCGGTCTGTAA 60.538 55.000 28.22 2.40 39.13 2.41
4942 10855 0.599558 CAGTCGGTCCGGTCTGTAAA 59.400 55.000 21.02 0.00 0.00 2.01
4943 10856 1.000060 CAGTCGGTCCGGTCTGTAAAA 60.000 52.381 21.02 0.00 0.00 1.52
4944 10857 1.688197 AGTCGGTCCGGTCTGTAAAAA 59.312 47.619 12.29 0.00 0.00 1.94
4945 10858 2.064014 GTCGGTCCGGTCTGTAAAAAG 58.936 52.381 12.29 0.00 0.00 2.27
4946 10859 1.962807 TCGGTCCGGTCTGTAAAAAGA 59.037 47.619 12.29 0.00 0.00 2.52
4947 10860 2.029649 TCGGTCCGGTCTGTAAAAAGAG 60.030 50.000 12.29 0.00 0.00 2.85
4948 10861 2.696506 GGTCCGGTCTGTAAAAAGAGG 58.303 52.381 0.00 0.00 0.00 3.69
4949 10862 2.074576 GTCCGGTCTGTAAAAAGAGGC 58.925 52.381 0.00 0.00 0.00 4.70
4950 10863 1.002773 TCCGGTCTGTAAAAAGAGGCC 59.997 52.381 0.00 0.00 0.00 5.19
4951 10864 1.450025 CGGTCTGTAAAAAGAGGCCC 58.550 55.000 0.00 0.00 29.30 5.80
4952 10865 1.450025 GGTCTGTAAAAAGAGGCCCG 58.550 55.000 0.00 0.00 0.00 6.13
4953 10866 1.002773 GGTCTGTAAAAAGAGGCCCGA 59.997 52.381 0.00 0.00 0.00 5.14
4954 10867 2.551504 GGTCTGTAAAAAGAGGCCCGAA 60.552 50.000 0.00 0.00 0.00 4.30
4955 10868 3.143728 GTCTGTAAAAAGAGGCCCGAAA 58.856 45.455 0.00 0.00 0.00 3.46
4956 10869 3.188667 GTCTGTAAAAAGAGGCCCGAAAG 59.811 47.826 0.00 0.00 0.00 2.62
4957 10870 3.071892 TCTGTAAAAAGAGGCCCGAAAGA 59.928 43.478 0.00 0.00 0.00 2.52
4958 10871 3.408634 TGTAAAAAGAGGCCCGAAAGAG 58.591 45.455 0.00 0.00 0.00 2.85
4959 10872 1.911057 AAAAAGAGGCCCGAAAGAGG 58.089 50.000 0.00 0.00 0.00 3.69
4960 10873 0.771755 AAAAGAGGCCCGAAAGAGGT 59.228 50.000 0.00 0.00 0.00 3.85
4961 10874 0.325272 AAAGAGGCCCGAAAGAGGTC 59.675 55.000 0.00 0.00 0.00 3.85
4962 10875 1.554583 AAGAGGCCCGAAAGAGGTCC 61.555 60.000 0.00 0.00 0.00 4.46
4963 10876 3.372554 GAGGCCCGAAAGAGGTCCG 62.373 68.421 0.00 0.00 0.00 4.79
4964 10877 4.468689 GGCCCGAAAGAGGTCCGG 62.469 72.222 0.00 0.00 42.64 5.14
4965 10878 3.703127 GCCCGAAAGAGGTCCGGT 61.703 66.667 0.00 0.00 41.53 5.28
4966 10879 2.577593 CCCGAAAGAGGTCCGGTC 59.422 66.667 0.00 0.00 41.53 4.79
4967 10880 2.577593 CCGAAAGAGGTCCGGTCC 59.422 66.667 10.05 10.05 38.55 4.46
4968 10881 2.181021 CGAAAGAGGTCCGGTCCG 59.819 66.667 12.29 3.60 0.00 4.79
4978 10891 2.428622 CCGGTCCGGTCCTGTTTT 59.571 61.111 23.02 0.00 42.73 2.43
4979 10892 1.964373 CCGGTCCGGTCCTGTTTTG 60.964 63.158 23.02 0.00 42.73 2.44
4980 10893 1.964373 CGGTCCGGTCCTGTTTTGG 60.964 63.158 15.98 0.00 0.00 3.28
4981 10894 2.265904 GGTCCGGTCCTGTTTTGGC 61.266 63.158 10.82 0.00 0.00 4.52
4982 10895 2.114411 TCCGGTCCTGTTTTGGCC 59.886 61.111 0.00 0.00 0.00 5.36
4983 10896 2.989253 CCGGTCCTGTTTTGGCCC 60.989 66.667 0.00 0.00 0.00 5.80
4984 10897 3.361977 CGGTCCTGTTTTGGCCCG 61.362 66.667 0.00 0.00 0.00 6.13
4985 10898 2.989253 GGTCCTGTTTTGGCCCGG 60.989 66.667 0.00 0.00 0.00 5.73
4986 10899 2.203437 GTCCTGTTTTGGCCCGGT 60.203 61.111 0.00 0.00 0.00 5.28
4987 10900 2.114411 TCCTGTTTTGGCCCGGTC 59.886 61.111 0.00 0.00 0.00 4.79
4988 10901 2.989253 CCTGTTTTGGCCCGGTCC 60.989 66.667 0.00 0.00 0.00 4.46
4989 10902 3.361977 CTGTTTTGGCCCGGTCCG 61.362 66.667 3.60 3.60 0.00 4.79
4992 10905 4.589675 TTTTGGCCCGGTCCGCTT 62.590 61.111 5.50 0.00 0.00 4.68
5005 10918 2.356553 CGCTTGGTCGGACCGAAA 60.357 61.111 20.26 9.61 42.58 3.46
5006 10919 2.380410 CGCTTGGTCGGACCGAAAG 61.380 63.158 20.26 19.88 42.58 2.62
5043 10956 9.914131 TTCATTATCTGAATAATAGTGACGAGG 57.086 33.333 0.00 0.00 38.97 4.63
5044 10957 8.029522 TCATTATCTGAATAATAGTGACGAGGC 58.970 37.037 0.00 0.00 36.18 4.70
5045 10958 4.585955 TCTGAATAATAGTGACGAGGCC 57.414 45.455 0.00 0.00 0.00 5.19
5046 10959 3.321111 TCTGAATAATAGTGACGAGGCCC 59.679 47.826 0.00 0.00 0.00 5.80
5047 10960 3.035363 TGAATAATAGTGACGAGGCCCA 58.965 45.455 0.00 0.00 0.00 5.36
5048 10961 3.069586 TGAATAATAGTGACGAGGCCCAG 59.930 47.826 0.00 0.00 0.00 4.45
5049 10962 0.750850 TAATAGTGACGAGGCCCAGC 59.249 55.000 0.00 0.00 0.00 4.85
5059 10972 3.219198 GGCCCAGCCCATTTAGCG 61.219 66.667 0.00 0.00 44.06 4.26
5060 10973 3.904479 GCCCAGCCCATTTAGCGC 61.904 66.667 0.00 0.00 34.64 5.92
5061 10974 2.124151 CCCAGCCCATTTAGCGCT 60.124 61.111 17.26 17.26 34.64 5.92
5062 10975 2.189499 CCCAGCCCATTTAGCGCTC 61.189 63.158 16.34 0.00 34.64 5.03
5063 10976 2.189499 CCAGCCCATTTAGCGCTCC 61.189 63.158 16.34 0.00 34.64 4.70
5064 10977 1.153086 CAGCCCATTTAGCGCTCCT 60.153 57.895 16.34 0.00 34.64 3.69
5065 10978 1.153086 AGCCCATTTAGCGCTCCTG 60.153 57.895 16.34 10.17 34.64 3.86
5066 10979 2.189499 GCCCATTTAGCGCTCCTGG 61.189 63.158 16.34 19.04 0.00 4.45
5067 10980 1.224592 CCCATTTAGCGCTCCTGGT 59.775 57.895 16.34 0.00 0.00 4.00
5068 10981 0.468226 CCCATTTAGCGCTCCTGGTA 59.532 55.000 16.34 0.00 0.00 3.25
5069 10982 1.072331 CCCATTTAGCGCTCCTGGTAT 59.928 52.381 16.34 0.00 0.00 2.73
5070 10983 2.146342 CCATTTAGCGCTCCTGGTATG 58.854 52.381 16.34 9.55 0.00 2.39
5071 10984 2.224281 CCATTTAGCGCTCCTGGTATGA 60.224 50.000 16.34 0.00 0.00 2.15
5072 10985 2.596904 TTTAGCGCTCCTGGTATGAC 57.403 50.000 16.34 0.00 0.00 3.06
5073 10986 0.750850 TTAGCGCTCCTGGTATGACC 59.249 55.000 16.34 0.00 39.22 4.02
5074 10987 0.106167 TAGCGCTCCTGGTATGACCT 60.106 55.000 16.34 0.00 39.58 3.85
5075 10988 0.106167 AGCGCTCCTGGTATGACCTA 60.106 55.000 2.64 0.00 39.58 3.08
5076 10989 0.750850 GCGCTCCTGGTATGACCTAA 59.249 55.000 0.00 0.00 39.58 2.69
5077 10990 1.344763 GCGCTCCTGGTATGACCTAAT 59.655 52.381 0.00 0.00 39.58 1.73
5078 10991 2.610727 GCGCTCCTGGTATGACCTAATC 60.611 54.545 0.00 0.00 39.58 1.75
5079 10992 2.028930 CGCTCCTGGTATGACCTAATCC 60.029 54.545 0.00 0.00 39.58 3.01
5080 10993 2.972713 GCTCCTGGTATGACCTAATCCA 59.027 50.000 0.00 0.00 39.58 3.41
5081 10994 3.584848 GCTCCTGGTATGACCTAATCCAT 59.415 47.826 0.00 0.00 39.58 3.41
5082 10995 4.323104 GCTCCTGGTATGACCTAATCCATC 60.323 50.000 0.00 0.00 39.58 3.51
5083 10996 4.168101 TCCTGGTATGACCTAATCCATCC 58.832 47.826 0.00 0.00 39.58 3.51
5084 10997 3.264450 CCTGGTATGACCTAATCCATCCC 59.736 52.174 0.00 0.00 39.58 3.85
5085 10998 3.909995 CTGGTATGACCTAATCCATCCCA 59.090 47.826 0.00 0.00 39.58 4.37
5086 10999 3.909995 TGGTATGACCTAATCCATCCCAG 59.090 47.826 0.00 0.00 39.58 4.45
5087 11000 3.264450 GGTATGACCTAATCCATCCCAGG 59.736 52.174 0.00 0.00 34.73 4.45
5088 11001 1.140312 TGACCTAATCCATCCCAGGC 58.860 55.000 0.00 0.00 0.00 4.85
5089 11002 1.140312 GACCTAATCCATCCCAGGCA 58.860 55.000 0.00 0.00 0.00 4.75
5090 11003 0.846693 ACCTAATCCATCCCAGGCAC 59.153 55.000 0.00 0.00 0.00 5.01
5091 11004 0.250467 CCTAATCCATCCCAGGCACG 60.250 60.000 0.00 0.00 0.00 5.34
5092 11005 0.886490 CTAATCCATCCCAGGCACGC 60.886 60.000 0.00 0.00 0.00 5.34
5093 11006 1.631071 TAATCCATCCCAGGCACGCA 61.631 55.000 0.00 0.00 0.00 5.24
5094 11007 3.704231 ATCCATCCCAGGCACGCAC 62.704 63.158 0.00 0.00 0.00 5.34
5095 11008 4.720902 CCATCCCAGGCACGCACA 62.721 66.667 0.00 0.00 0.00 4.57
5096 11009 2.438975 CATCCCAGGCACGCACAT 60.439 61.111 0.00 0.00 0.00 3.21
5097 11010 2.124570 ATCCCAGGCACGCACATC 60.125 61.111 0.00 0.00 0.00 3.06
5098 11011 2.673200 ATCCCAGGCACGCACATCT 61.673 57.895 0.00 0.00 0.00 2.90
5099 11012 2.599645 ATCCCAGGCACGCACATCTC 62.600 60.000 0.00 0.00 0.00 2.75
5100 11013 2.046988 CCAGGCACGCACATCTCA 60.047 61.111 0.00 0.00 0.00 3.27
5101 11014 2.393768 CCAGGCACGCACATCTCAC 61.394 63.158 0.00 0.00 0.00 3.51
5102 11015 1.375140 CAGGCACGCACATCTCACT 60.375 57.895 0.00 0.00 0.00 3.41
5103 11016 1.079543 AGGCACGCACATCTCACTC 60.080 57.895 0.00 0.00 0.00 3.51
5104 11017 2.103042 GGCACGCACATCTCACTCC 61.103 63.158 0.00 0.00 0.00 3.85
5105 11018 1.374631 GCACGCACATCTCACTCCA 60.375 57.895 0.00 0.00 0.00 3.86
5106 11019 0.950555 GCACGCACATCTCACTCCAA 60.951 55.000 0.00 0.00 0.00 3.53
5107 11020 0.792640 CACGCACATCTCACTCCAAC 59.207 55.000 0.00 0.00 0.00 3.77
5108 11021 0.667487 ACGCACATCTCACTCCAACG 60.667 55.000 0.00 0.00 0.00 4.10
5109 11022 1.790387 GCACATCTCACTCCAACGC 59.210 57.895 0.00 0.00 0.00 4.84
5110 11023 0.671781 GCACATCTCACTCCAACGCT 60.672 55.000 0.00 0.00 0.00 5.07
5111 11024 1.354040 CACATCTCACTCCAACGCTC 58.646 55.000 0.00 0.00 0.00 5.03
5112 11025 0.969149 ACATCTCACTCCAACGCTCA 59.031 50.000 0.00 0.00 0.00 4.26
5113 11026 1.337260 ACATCTCACTCCAACGCTCAC 60.337 52.381 0.00 0.00 0.00 3.51
5114 11027 0.969149 ATCTCACTCCAACGCTCACA 59.031 50.000 0.00 0.00 0.00 3.58
5115 11028 0.969149 TCTCACTCCAACGCTCACAT 59.031 50.000 0.00 0.00 0.00 3.21
5116 11029 1.073964 CTCACTCCAACGCTCACATG 58.926 55.000 0.00 0.00 0.00 3.21
5117 11030 0.678950 TCACTCCAACGCTCACATGA 59.321 50.000 0.00 0.00 0.00 3.07
5118 11031 1.276138 TCACTCCAACGCTCACATGAT 59.724 47.619 0.00 0.00 0.00 2.45
5119 11032 1.395954 CACTCCAACGCTCACATGATG 59.604 52.381 0.00 0.00 0.00 3.07
5120 11033 0.376152 CTCCAACGCTCACATGATGC 59.624 55.000 0.00 0.00 0.00 3.91
5124 11037 3.945434 CGCTCACATGATGCGGCC 61.945 66.667 18.38 0.00 45.07 6.13
5125 11038 3.945434 GCTCACATGATGCGGCCG 61.945 66.667 24.05 24.05 0.00 6.13
5126 11039 2.512286 CTCACATGATGCGGCCGT 60.512 61.111 28.70 7.71 0.00 5.68
5127 11040 2.511373 TCACATGATGCGGCCGTC 60.511 61.111 28.70 18.17 0.00 4.79
5128 11041 3.576356 CACATGATGCGGCCGTCC 61.576 66.667 28.70 16.28 0.00 4.79
5129 11042 3.785859 ACATGATGCGGCCGTCCT 61.786 61.111 28.70 11.78 0.00 3.85
5130 11043 2.969238 CATGATGCGGCCGTCCTC 60.969 66.667 28.70 20.26 0.00 3.71
5131 11044 4.241555 ATGATGCGGCCGTCCTCC 62.242 66.667 28.70 10.19 0.00 4.30
5133 11046 4.593864 GATGCGGCCGTCCTCCTC 62.594 72.222 28.70 8.52 0.00 3.71
5139 11052 4.083862 GCCGTCCTCCTCCACCAC 62.084 72.222 0.00 0.00 0.00 4.16
5140 11053 3.760035 CCGTCCTCCTCCACCACG 61.760 72.222 0.00 0.00 0.00 4.94
5141 11054 4.436998 CGTCCTCCTCCACCACGC 62.437 72.222 0.00 0.00 0.00 5.34
5142 11055 3.311110 GTCCTCCTCCACCACGCA 61.311 66.667 0.00 0.00 0.00 5.24
5143 11056 2.525629 TCCTCCTCCACCACGCAA 60.526 61.111 0.00 0.00 0.00 4.85
5144 11057 2.358737 CCTCCTCCACCACGCAAC 60.359 66.667 0.00 0.00 0.00 4.17
5145 11058 2.425592 CTCCTCCACCACGCAACA 59.574 61.111 0.00 0.00 0.00 3.33
5146 11059 1.669115 CTCCTCCACCACGCAACAG 60.669 63.158 0.00 0.00 0.00 3.16
5147 11060 3.357079 CCTCCACCACGCAACAGC 61.357 66.667 0.00 0.00 0.00 4.40
5148 11061 3.357079 CTCCACCACGCAACAGCC 61.357 66.667 0.00 0.00 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 0.108585 AAAGGAGCAAACAGAGGCGA 59.891 50.000 0.00 0.00 34.54 5.54
83 84 4.034279 GCCACAACTTAACACGAAGTTACA 59.966 41.667 1.47 0.00 45.70 2.41
96 2410 6.622833 GTTTAGGTAAACAGCCACAACTTA 57.377 37.500 7.59 0.00 43.70 2.24
175 3971 6.046593 TGAAAGCGATAAAACATCTACGGAT 58.953 36.000 0.00 0.00 0.00 4.18
176 3972 5.412640 TGAAAGCGATAAAACATCTACGGA 58.587 37.500 0.00 0.00 0.00 4.69
177 3973 5.291128 ACTGAAAGCGATAAAACATCTACGG 59.709 40.000 0.00 0.00 37.60 4.02
178 3974 6.332504 ACTGAAAGCGATAAAACATCTACG 57.667 37.500 0.00 0.00 37.60 3.51
226 4062 7.254455 CCACTTGTACTCTTTGTTTACAGACAG 60.254 40.741 0.00 0.00 0.00 3.51
256 4092 6.423001 CACCCGGTGCTACTAATATAAAACTC 59.577 42.308 4.16 0.00 0.00 3.01
276 4112 0.680921 AATTCATGAGCACCCACCCG 60.681 55.000 0.00 0.00 0.00 5.28
282 4118 2.945668 GGACTACCAATTCATGAGCACC 59.054 50.000 0.00 0.00 35.97 5.01
283 4119 3.878778 AGGACTACCAATTCATGAGCAC 58.121 45.455 0.00 0.00 38.94 4.40
284 4120 4.962362 TCTAGGACTACCAATTCATGAGCA 59.038 41.667 0.00 0.00 38.94 4.26
285 4121 5.537300 TCTAGGACTACCAATTCATGAGC 57.463 43.478 0.00 0.00 38.94 4.26
309 4165 2.438254 TCGTCGGCCCTACGCTAA 60.438 61.111 18.10 1.42 40.12 3.09
321 4177 0.309302 CTAGGCTGATCCAGTCGTCG 59.691 60.000 0.00 0.00 41.46 5.12
375 4235 6.354938 CATCAGTGTGGGTACTAGACTACTA 58.645 44.000 0.00 0.00 42.42 1.82
376 4236 4.923516 TCAGTGTGGGTACTAGACTACT 57.076 45.455 0.00 0.00 42.42 2.57
377 4237 4.338682 CCATCAGTGTGGGTACTAGACTAC 59.661 50.000 0.00 0.00 42.42 2.73
378 4238 4.228895 TCCATCAGTGTGGGTACTAGACTA 59.771 45.833 0.00 0.00 42.42 2.59
379 4239 3.011369 TCCATCAGTGTGGGTACTAGACT 59.989 47.826 0.00 0.00 45.81 3.24
380 4240 3.130693 GTCCATCAGTGTGGGTACTAGAC 59.869 52.174 0.00 0.00 39.80 2.59
381 4241 3.245479 TGTCCATCAGTGTGGGTACTAGA 60.245 47.826 0.00 0.00 39.80 2.43
382 4242 3.096852 TGTCCATCAGTGTGGGTACTAG 58.903 50.000 10.61 0.00 39.80 2.57
449 4309 0.257039 TGGGACGGAGGGAGTAGTAC 59.743 60.000 0.00 0.00 0.00 2.73
450 4310 1.229131 ATGGGACGGAGGGAGTAGTA 58.771 55.000 0.00 0.00 0.00 1.82
451 4311 1.229131 TATGGGACGGAGGGAGTAGT 58.771 55.000 0.00 0.00 0.00 2.73
454 4314 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
456 4316 4.775780 CACTTATATTATGGGACGGAGGGA 59.224 45.833 0.00 0.00 0.00 4.20
457 4317 4.623171 GCACTTATATTATGGGACGGAGGG 60.623 50.000 0.00 0.00 0.00 4.30
458 4318 4.504858 GCACTTATATTATGGGACGGAGG 58.495 47.826 0.00 0.00 0.00 4.30
462 4322 4.748102 ACAACGCACTTATATTATGGGACG 59.252 41.667 0.00 0.00 0.00 4.79
463 4323 6.259167 TCAACAACGCACTTATATTATGGGAC 59.741 38.462 0.00 0.00 0.00 4.46
464 4324 6.350103 TCAACAACGCACTTATATTATGGGA 58.650 36.000 0.00 0.00 0.00 4.37
465 4325 6.612247 TCAACAACGCACTTATATTATGGG 57.388 37.500 0.00 0.00 0.00 4.00
469 4329 6.370442 AGCACTTCAACAACGCACTTATATTA 59.630 34.615 0.00 0.00 0.00 0.98
470 4330 5.181245 AGCACTTCAACAACGCACTTATATT 59.819 36.000 0.00 0.00 0.00 1.28
471 4331 4.695455 AGCACTTCAACAACGCACTTATAT 59.305 37.500 0.00 0.00 0.00 0.86
473 4333 2.878406 AGCACTTCAACAACGCACTTAT 59.122 40.909 0.00 0.00 0.00 1.73
474 4334 2.285083 AGCACTTCAACAACGCACTTA 58.715 42.857 0.00 0.00 0.00 2.24
476 4336 0.657840 GAGCACTTCAACAACGCACT 59.342 50.000 0.00 0.00 0.00 4.40
477 4337 0.657840 AGAGCACTTCAACAACGCAC 59.342 50.000 0.00 0.00 0.00 5.34
478 4338 1.378531 AAGAGCACTTCAACAACGCA 58.621 45.000 0.00 0.00 0.00 5.24
481 4341 6.455646 CCGTGATATAAGAGCACTTCAACAAC 60.456 42.308 0.00 0.00 42.56 3.32
482 4342 5.580691 CCGTGATATAAGAGCACTTCAACAA 59.419 40.000 0.00 0.00 42.56 2.83
483 4343 5.109210 CCGTGATATAAGAGCACTTCAACA 58.891 41.667 0.00 0.00 42.56 3.33
485 4345 4.404394 TCCCGTGATATAAGAGCACTTCAA 59.596 41.667 0.00 0.00 42.56 2.69
486 4346 3.958147 TCCCGTGATATAAGAGCACTTCA 59.042 43.478 0.00 0.00 42.56 3.02
487 4347 4.202121 TGTCCCGTGATATAAGAGCACTTC 60.202 45.833 0.00 0.00 42.56 3.01
488 4348 3.704566 TGTCCCGTGATATAAGAGCACTT 59.295 43.478 1.05 1.05 42.56 3.16
489 4349 3.296854 TGTCCCGTGATATAAGAGCACT 58.703 45.455 0.00 0.00 42.56 4.40
490 4350 3.318275 TCTGTCCCGTGATATAAGAGCAC 59.682 47.826 0.00 0.00 41.25 4.40
491 4351 3.562182 TCTGTCCCGTGATATAAGAGCA 58.438 45.455 0.00 0.00 0.00 4.26
492 4352 3.057174 CCTCTGTCCCGTGATATAAGAGC 60.057 52.174 0.00 0.00 0.00 4.09
493 4353 3.508012 CCCTCTGTCCCGTGATATAAGAG 59.492 52.174 0.00 0.00 0.00 2.85
497 4357 2.445905 ACTCCCTCTGTCCCGTGATATA 59.554 50.000 0.00 0.00 0.00 0.86
498 4358 1.218196 ACTCCCTCTGTCCCGTGATAT 59.782 52.381 0.00 0.00 0.00 1.63
499 4359 0.629596 ACTCCCTCTGTCCCGTGATA 59.370 55.000 0.00 0.00 0.00 2.15
500 4360 0.629596 TACTCCCTCTGTCCCGTGAT 59.370 55.000 0.00 0.00 0.00 3.06
501 4361 0.629596 ATACTCCCTCTGTCCCGTGA 59.370 55.000 0.00 0.00 0.00 4.35
502 4362 2.359981 TATACTCCCTCTGTCCCGTG 57.640 55.000 0.00 0.00 0.00 4.94
503 4363 3.614568 AATATACTCCCTCTGTCCCGT 57.385 47.619 0.00 0.00 0.00 5.28
504 4364 4.957684 AAAATATACTCCCTCTGTCCCG 57.042 45.455 0.00 0.00 0.00 5.14
505 4365 7.133133 TGTAAAAATATACTCCCTCTGTCCC 57.867 40.000 0.00 0.00 0.00 4.46
543 4403 3.198863 ACGACAATACGAGTGTGTCTC 57.801 47.619 15.18 0.00 39.61 3.36
556 4416 4.970662 ACGTATGTACACCTACGACAAT 57.029 40.909 27.22 9.20 41.02 2.71
569 4429 3.061563 GTCAATGCAAGCGAACGTATGTA 59.938 43.478 0.00 0.00 0.00 2.29
666 4722 5.586643 GCTAGATTGTTTGGTTCCTAGGAAG 59.413 44.000 24.91 9.04 34.49 3.46
695 4751 1.143183 GTCCGGCAGAAGCGGAATA 59.857 57.895 0.00 0.00 42.23 1.75
701 4889 3.512516 GCATGGTCCGGCAGAAGC 61.513 66.667 0.00 0.00 41.10 3.86
703 4891 1.228398 TTTGCATGGTCCGGCAGAA 60.228 52.632 0.00 4.29 41.68 3.02
722 4910 0.108851 CTTGCCAACCCGCCATTAAC 60.109 55.000 0.00 0.00 0.00 2.01
916 5661 5.778750 ACTAGTAGTTAACAAGGAGGAGCAA 59.221 40.000 8.61 0.00 0.00 3.91
917 5662 5.331069 ACTAGTAGTTAACAAGGAGGAGCA 58.669 41.667 8.61 0.00 0.00 4.26
918 5663 5.418209 TGACTAGTAGTTAACAAGGAGGAGC 59.582 44.000 8.61 0.00 0.00 4.70
919 5664 7.558444 AGATGACTAGTAGTTAACAAGGAGGAG 59.442 40.741 8.61 0.00 0.00 3.69
920 5665 7.411808 AGATGACTAGTAGTTAACAAGGAGGA 58.588 38.462 8.61 0.00 0.00 3.71
936 5683 1.284408 GAGCGGGCGAGATGACTAG 59.716 63.158 0.00 0.00 0.00 2.57
937 5684 2.194212 GGAGCGGGCGAGATGACTA 61.194 63.158 0.00 0.00 0.00 2.59
938 5685 3.532155 GGAGCGGGCGAGATGACT 61.532 66.667 0.00 0.00 0.00 3.41
1009 5762 2.041265 GAGGAGGAGGGGCTGGAA 59.959 66.667 0.00 0.00 0.00 3.53
1033 5792 3.325135 AGCCGGAGAAAAGAAGAGAGAAA 59.675 43.478 5.05 0.00 0.00 2.52
1035 5794 2.232452 CAGCCGGAGAAAAGAAGAGAGA 59.768 50.000 5.05 0.00 0.00 3.10
1077 5839 1.525535 GCATCTCTTGGGCGAGCAT 60.526 57.895 0.00 0.00 0.00 3.79
1367 6144 1.376812 TCGAGTACGAGCAGCTCCA 60.377 57.895 17.16 1.84 43.81 3.86
1674 6475 0.819582 CGGAGCAATGGCAGGAAAAT 59.180 50.000 0.00 0.00 44.61 1.82
1742 6543 1.079956 GCAAAATCATGGTGGCGCA 60.080 52.632 10.83 0.00 0.00 6.09
1809 6625 5.523916 GTCACTAGCACTTGAAGTTTTGAGA 59.476 40.000 0.00 0.00 0.00 3.27
1826 6651 4.398358 TGGAGTTACTGAATCGGTCACTAG 59.602 45.833 8.85 0.00 28.75 2.57
1843 6668 2.306847 ACGTCAGGCATTTTTGGAGTT 58.693 42.857 0.00 0.00 0.00 3.01
1900 6805 6.861065 ACGCAGAAAATTTACTCTTGAGAA 57.139 33.333 4.49 0.00 0.00 2.87
1951 6863 1.068474 CGTGTCCAATCGGTGTTCTC 58.932 55.000 0.00 0.00 0.00 2.87
1956 6868 2.526304 ATATCCGTGTCCAATCGGTG 57.474 50.000 3.64 0.00 45.88 4.94
1957 6869 2.169769 ACAATATCCGTGTCCAATCGGT 59.830 45.455 3.64 0.00 45.88 4.69
1959 6871 3.621268 ACAACAATATCCGTGTCCAATCG 59.379 43.478 0.00 0.00 0.00 3.34
2003 6952 2.532250 ATAGCCCCAAGAAACCAAGG 57.468 50.000 0.00 0.00 0.00 3.61
2113 7254 6.089920 TGAATAGCGTTGTTGACTAATTCG 57.910 37.500 0.00 0.00 0.00 3.34
2154 7295 2.813908 CCAGGAGCACGTTACCGC 60.814 66.667 0.00 0.00 37.70 5.68
2196 7338 1.959042 AGAGCATTGATCGGCGATTT 58.041 45.000 24.81 9.38 34.54 2.17
2223 7378 0.623723 AAATACAGACCGGGGCACAT 59.376 50.000 6.32 0.00 0.00 3.21
2231 7386 6.489127 TCCACATGTTTTAAATACAGACCG 57.511 37.500 0.00 0.00 0.00 4.79
2314 7568 2.781681 ATCCACTGAAACTAACCCCG 57.218 50.000 0.00 0.00 0.00 5.73
2316 7570 7.179076 TCTAAGTATCCACTGAAACTAACCC 57.821 40.000 0.00 0.00 34.36 4.11
2375 7692 5.645497 ACATAGGAAGCAAAATGAGTGAGTC 59.355 40.000 0.00 0.00 0.00 3.36
2394 7711 6.757237 AGAGATTCCAATGCTGACTACATAG 58.243 40.000 0.00 0.00 0.00 2.23
2511 8232 4.392138 CGAACTCCCTTTTATGACTGGTTC 59.608 45.833 0.00 0.00 0.00 3.62
2521 8242 5.241506 TCTCGTAAAGTCGAACTCCCTTTTA 59.758 40.000 3.64 0.00 39.34 1.52
2620 8355 7.432838 GCGGTTTATGAAGTAACAAACAAGAAA 59.567 33.333 0.00 0.00 33.53 2.52
2764 8545 5.596845 TGTTACAATTTGGAGCAAGGAAAC 58.403 37.500 0.00 0.00 0.00 2.78
2785 8567 5.488919 CACCCCCATATTCTCCATACTATGT 59.511 44.000 0.00 0.00 0.00 2.29
2839 8639 6.707161 ACATTAGCAACATGAAGCAAACAAAT 59.293 30.769 14.61 5.45 0.00 2.32
2867 8675 5.393962 GCTCCAACTGTTCACAACAATATC 58.606 41.667 0.00 0.00 41.61 1.63
3006 8836 4.331168 CAGCTCAAGGTCTTTACTGTATGC 59.669 45.833 0.00 0.00 0.00 3.14
3158 8988 4.147219 ACAAGTTAAGATTGACAAGCGC 57.853 40.909 0.00 0.00 0.00 5.92
3291 9164 2.826488 ACTGCAACTACTCTCCCATCT 58.174 47.619 0.00 0.00 0.00 2.90
3312 9185 7.156673 TGTAGTTGTTCTTATAGAGGCGTTTT 58.843 34.615 0.00 0.00 0.00 2.43
3321 9194 6.205101 ACCCGTCTGTAGTTGTTCTTATAG 57.795 41.667 0.00 0.00 0.00 1.31
3324 9197 4.341806 TCAACCCGTCTGTAGTTGTTCTTA 59.658 41.667 0.00 0.00 41.27 2.10
3369 9242 2.041922 AGCAGGCGGGACAGGATA 60.042 61.111 0.00 0.00 0.00 2.59
3393 9266 4.677182 AGCCATAAAGGATGACAAGGTTT 58.323 39.130 0.00 0.00 41.22 3.27
3408 9281 1.153647 CCGAGACGTGCAGCCATAA 60.154 57.895 0.00 0.00 0.00 1.90
3432 9305 1.933021 ACACCAGGATAAGGTCACGA 58.067 50.000 0.00 0.00 37.23 4.35
3442 9315 2.099263 CGATGAACTCGTACACCAGGAT 59.901 50.000 0.00 0.00 42.56 3.24
3500 9373 3.035727 GGCCTCGTTTTGCCGAAA 58.964 55.556 0.00 0.00 38.00 3.46
3507 9380 2.946947 CCATGTGAGGCCTCGTTTT 58.053 52.632 27.43 9.74 0.00 2.43
3508 9381 4.722193 CCATGTGAGGCCTCGTTT 57.278 55.556 27.43 11.61 0.00 3.60
3535 9408 4.433186 CCGTTTCTATGGCAATGTTCAA 57.567 40.909 0.00 0.00 0.00 2.69
3568 9441 2.423898 CGACCGCATGGAGGTAGGT 61.424 63.158 0.00 0.00 43.01 3.08
3606 9479 4.154015 TCAAGCAATATGTTGGTCGTCTTG 59.846 41.667 7.38 9.55 44.74 3.02
3673 9546 0.472471 GTGACCTCCAGTGGGAACAA 59.528 55.000 9.92 0.00 44.38 2.83
3684 9557 0.909610 TGGAGACATGGGTGACCTCC 60.910 60.000 0.00 0.00 44.99 4.30
3786 9659 1.885388 CACCAGCACGACACCGAAA 60.885 57.895 0.00 0.00 39.50 3.46
3903 9776 2.139917 TCCGAATCAACCAACTGAACG 58.860 47.619 0.00 0.00 0.00 3.95
3919 9792 1.079612 TGTCGTAGTCGAGCTCCGA 60.080 57.895 8.47 8.07 46.96 4.55
3929 9802 3.058160 CGGGGTCGGTGTCGTAGT 61.058 66.667 0.00 0.00 37.69 2.73
4136 10012 1.493311 GAGTCAGGCGAAAACTGCG 59.507 57.895 0.00 0.00 35.94 5.18
4229 10105 7.012327 TGGCCTTATTTCTTCAGAATCAATACG 59.988 37.037 3.32 0.00 33.54 3.06
4255 10131 5.373812 AAAACTCATCCGATTGATAGGGT 57.626 39.130 0.00 0.00 30.56 4.34
4260 10140 9.896645 ATGCTATATAAAACTCATCCGATTGAT 57.103 29.630 0.00 0.00 0.00 2.57
4314 10194 4.130118 CCATGAGCCTGTACTTATTGGTC 58.870 47.826 0.00 0.00 0.00 4.02
4317 10200 4.201950 GCAACCATGAGCCTGTACTTATTG 60.202 45.833 0.00 0.00 0.00 1.90
4342 10225 5.106157 GCCAAGCTTAGAAATGCAGAGTTAA 60.106 40.000 0.00 0.00 0.00 2.01
4358 10241 4.258543 CCATTTGAATCATTGCCAAGCTT 58.741 39.130 0.00 0.00 0.00 3.74
4399 10282 7.338800 ACAGTGCTTATATCCTGGAATTTTG 57.661 36.000 0.00 0.00 0.00 2.44
4400 10283 9.646522 ATTACAGTGCTTATATCCTGGAATTTT 57.353 29.630 0.00 0.00 35.44 1.82
4415 10298 9.378551 TCAATCTTTTCGTATATTACAGTGCTT 57.621 29.630 0.00 0.00 0.00 3.91
4431 10314 6.303259 CGTCAACTTCGGAATTCAATCTTTTC 59.697 38.462 7.93 0.00 0.00 2.29
4432 10315 6.017440 TCGTCAACTTCGGAATTCAATCTTTT 60.017 34.615 7.93 0.00 0.00 2.27
4434 10317 4.994852 TCGTCAACTTCGGAATTCAATCTT 59.005 37.500 7.93 0.00 0.00 2.40
4435 10318 4.566004 TCGTCAACTTCGGAATTCAATCT 58.434 39.130 7.93 0.00 0.00 2.40
4436 10319 4.921470 TCGTCAACTTCGGAATTCAATC 57.079 40.909 7.93 0.00 0.00 2.67
4438 10321 5.294799 TCTTTTCGTCAACTTCGGAATTCAA 59.705 36.000 7.93 0.00 0.00 2.69
4440 10323 5.338614 TCTTTTCGTCAACTTCGGAATTC 57.661 39.130 0.00 0.00 0.00 2.17
4441 10324 5.941948 ATCTTTTCGTCAACTTCGGAATT 57.058 34.783 0.00 0.00 0.00 2.17
4442 10325 5.468746 TCAATCTTTTCGTCAACTTCGGAAT 59.531 36.000 0.00 0.00 0.00 3.01
4443 10326 4.812091 TCAATCTTTTCGTCAACTTCGGAA 59.188 37.500 0.00 0.00 0.00 4.30
4444 10327 4.373527 TCAATCTTTTCGTCAACTTCGGA 58.626 39.130 0.00 0.00 0.00 4.55
4445 10328 4.725556 TCAATCTTTTCGTCAACTTCGG 57.274 40.909 0.00 0.00 0.00 4.30
4446 10329 6.850823 TGAATTCAATCTTTTCGTCAACTTCG 59.149 34.615 5.45 0.00 0.00 3.79
4447 10330 8.070171 TCTGAATTCAATCTTTTCGTCAACTTC 58.930 33.333 9.88 0.00 0.00 3.01
4570 10462 2.645838 ACAGACCAGCAAACTCACAT 57.354 45.000 0.00 0.00 0.00 3.21
4576 10468 0.459489 TGCCAAACAGACCAGCAAAC 59.541 50.000 0.00 0.00 0.00 2.93
4614 10506 6.423604 GCTTGAATTCCAAATTTCGGAAAGAA 59.576 34.615 19.33 7.23 45.42 2.52
4616 10508 5.120674 GGCTTGAATTCCAAATTTCGGAAAG 59.879 40.000 19.33 14.82 45.42 2.62
4617 10509 4.994217 GGCTTGAATTCCAAATTTCGGAAA 59.006 37.500 19.33 5.52 45.42 3.13
4618 10510 4.039730 TGGCTTGAATTCCAAATTTCGGAA 59.960 37.500 18.35 18.35 46.30 4.30
4619 10511 3.576118 TGGCTTGAATTCCAAATTTCGGA 59.424 39.130 2.27 5.55 33.76 4.55
4620 10512 3.924144 TGGCTTGAATTCCAAATTTCGG 58.076 40.909 2.27 0.00 33.76 4.30
4621 10513 5.409214 ACATTGGCTTGAATTCCAAATTTCG 59.591 36.000 2.27 0.00 44.55 3.46
4633 10546 4.461081 GGTGGTACAATACATTGGCTTGAA 59.539 41.667 6.87 0.00 44.16 2.69
4663 10576 4.030452 GCCGTGCTGACACCAAGC 62.030 66.667 0.00 0.00 44.40 4.01
4679 10592 7.475840 CAGATTTTAGGAGAAAATGTACCTGC 58.524 38.462 0.00 0.00 34.42 4.85
4694 10607 8.908786 TCTTATGTCCTTATGCAGATTTTAGG 57.091 34.615 0.00 0.00 0.00 2.69
4697 10610 6.264067 GCCTCTTATGTCCTTATGCAGATTTT 59.736 38.462 0.00 0.00 0.00 1.82
4715 10628 3.052109 TGGTCCCAGATTAGAGCCTCTTA 60.052 47.826 0.00 0.00 0.00 2.10
4721 10634 1.475930 GCCTTGGTCCCAGATTAGAGC 60.476 57.143 0.00 0.00 0.00 4.09
4724 10637 0.183731 GGGCCTTGGTCCCAGATTAG 59.816 60.000 0.84 0.00 43.37 1.73
4726 10639 3.100111 GGGCCTTGGTCCCAGATT 58.900 61.111 0.84 0.00 43.37 2.40
4748 10661 2.094182 ACGACCGACATTCTACAGCATT 60.094 45.455 0.00 0.00 0.00 3.56
4756 10669 1.738099 GCAGCACGACCGACATTCT 60.738 57.895 0.00 0.00 0.00 2.40
4787 10700 3.963428 AAGGTCACTAGAGCGACATTT 57.037 42.857 0.00 0.00 46.62 2.32
4793 10706 2.457366 ACCAAAAGGTCACTAGAGCG 57.543 50.000 0.00 0.00 46.62 5.03
4823 10736 2.362369 CCTGAGGCGGGTGAGTGAT 61.362 63.158 0.00 0.00 0.00 3.06
4837 10750 2.360726 TCGCTACGTCCAGCCTGA 60.361 61.111 4.77 0.00 38.37 3.86
4842 10755 4.554363 CCCGCTCGCTACGTCCAG 62.554 72.222 0.00 0.00 0.00 3.86
4848 10761 2.253414 CTTTTTGGCCCGCTCGCTAC 62.253 60.000 0.00 0.00 0.00 3.58
4849 10762 2.032834 TTTTTGGCCCGCTCGCTA 59.967 55.556 0.00 0.00 0.00 4.26
4850 10763 3.365265 CTTTTTGGCCCGCTCGCT 61.365 61.111 0.00 0.00 0.00 4.93
4852 10765 4.419939 GGCTTTTTGGCCCGCTCG 62.420 66.667 0.00 0.00 45.92 5.03
4859 10772 3.670377 ACGAGCGGGCTTTTTGGC 61.670 61.111 0.00 0.00 40.96 4.52
4860 10773 2.255252 CACGAGCGGGCTTTTTGG 59.745 61.111 0.00 0.00 0.00 3.28
4861 10774 2.255252 CCACGAGCGGGCTTTTTG 59.745 61.111 0.00 0.00 0.00 2.44
4862 10775 2.112297 TCCACGAGCGGGCTTTTT 59.888 55.556 0.00 0.00 0.00 1.94
4863 10776 2.668550 GTCCACGAGCGGGCTTTT 60.669 61.111 0.00 0.00 0.00 2.27
4864 10777 4.699522 GGTCCACGAGCGGGCTTT 62.700 66.667 0.00 0.00 0.00 3.51
4886 10799 2.478746 CAATTTCGGTCCGGTGCG 59.521 61.111 12.29 0.00 0.00 5.34
4887 10800 1.644786 CTCCAATTTCGGTCCGGTGC 61.645 60.000 12.29 0.00 0.00 5.01
4888 10801 1.024579 CCTCCAATTTCGGTCCGGTG 61.025 60.000 12.29 4.92 0.00 4.94
4889 10802 1.298667 CCTCCAATTTCGGTCCGGT 59.701 57.895 12.29 0.00 0.00 5.28
4890 10803 2.112815 GCCTCCAATTTCGGTCCGG 61.113 63.158 12.29 0.00 0.00 5.14
4891 10804 2.112815 GGCCTCCAATTTCGGTCCG 61.113 63.158 4.39 4.39 0.00 4.79
4892 10805 1.753078 GGGCCTCCAATTTCGGTCC 60.753 63.158 0.84 0.00 35.08 4.46
4893 10806 2.112815 CGGGCCTCCAATTTCGGTC 61.113 63.158 0.84 0.00 0.00 4.79
4894 10807 2.045340 CGGGCCTCCAATTTCGGT 60.045 61.111 0.84 0.00 0.00 4.69
4895 10808 2.112815 GTCGGGCCTCCAATTTCGG 61.113 63.158 0.84 0.00 0.00 4.30
4896 10809 1.369091 CTGTCGGGCCTCCAATTTCG 61.369 60.000 0.84 0.00 0.00 3.46
4897 10810 0.035439 TCTGTCGGGCCTCCAATTTC 60.035 55.000 0.84 0.00 0.00 2.17
4898 10811 0.404040 TTCTGTCGGGCCTCCAATTT 59.596 50.000 0.84 0.00 0.00 1.82
4899 10812 0.404040 TTTCTGTCGGGCCTCCAATT 59.596 50.000 0.84 0.00 0.00 2.32
4900 10813 0.404040 TTTTCTGTCGGGCCTCCAAT 59.596 50.000 0.84 0.00 0.00 3.16
4901 10814 0.404040 ATTTTCTGTCGGGCCTCCAA 59.596 50.000 0.84 0.00 0.00 3.53
4902 10815 1.281419 TATTTTCTGTCGGGCCTCCA 58.719 50.000 0.84 0.00 0.00 3.86
4903 10816 2.014857 GTTATTTTCTGTCGGGCCTCC 58.985 52.381 0.84 0.00 0.00 4.30
4904 10817 2.678336 CTGTTATTTTCTGTCGGGCCTC 59.322 50.000 0.84 0.00 0.00 4.70
4905 10818 2.039879 ACTGTTATTTTCTGTCGGGCCT 59.960 45.455 0.84 0.00 0.00 5.19
4906 10819 2.418976 GACTGTTATTTTCTGTCGGGCC 59.581 50.000 0.00 0.00 0.00 5.80
4907 10820 2.093783 CGACTGTTATTTTCTGTCGGGC 59.906 50.000 14.21 0.00 45.92 6.13
4908 10821 3.991605 CGACTGTTATTTTCTGTCGGG 57.008 47.619 14.21 0.00 45.92 5.14
4911 10824 3.367025 CGGACCGACTGTTATTTTCTGTC 59.633 47.826 8.64 0.00 0.00 3.51
4912 10825 3.323243 CGGACCGACTGTTATTTTCTGT 58.677 45.455 8.64 0.00 0.00 3.41
4913 10826 2.671396 CCGGACCGACTGTTATTTTCTG 59.329 50.000 17.49 0.00 0.00 3.02
4914 10827 2.301009 ACCGGACCGACTGTTATTTTCT 59.699 45.455 17.49 0.00 0.00 2.52
4915 10828 2.669924 GACCGGACCGACTGTTATTTTC 59.330 50.000 17.49 0.00 0.00 2.29
4916 10829 2.301009 AGACCGGACCGACTGTTATTTT 59.699 45.455 17.49 0.00 0.00 1.82
4917 10830 1.897802 AGACCGGACCGACTGTTATTT 59.102 47.619 17.49 0.00 0.00 1.40
4918 10831 1.203994 CAGACCGGACCGACTGTTATT 59.796 52.381 17.49 0.00 0.00 1.40
4919 10832 0.815734 CAGACCGGACCGACTGTTAT 59.184 55.000 17.49 0.00 0.00 1.89
4920 10833 0.538057 ACAGACCGGACCGACTGTTA 60.538 55.000 28.01 0.00 39.47 2.41
4921 10834 0.538057 TACAGACCGGACCGACTGTT 60.538 55.000 33.60 23.50 41.23 3.16
4922 10835 0.538057 TTACAGACCGGACCGACTGT 60.538 55.000 32.21 32.21 42.48 3.55
4923 10836 0.599558 TTTACAGACCGGACCGACTG 59.400 55.000 27.06 27.06 37.22 3.51
4924 10837 1.331214 TTTTACAGACCGGACCGACT 58.669 50.000 17.49 11.55 0.00 4.18
4925 10838 2.064014 CTTTTTACAGACCGGACCGAC 58.936 52.381 17.49 9.22 0.00 4.79
4926 10839 1.962807 TCTTTTTACAGACCGGACCGA 59.037 47.619 17.49 0.00 0.00 4.69
4927 10840 2.334838 CTCTTTTTACAGACCGGACCG 58.665 52.381 9.46 6.99 0.00 4.79
4928 10841 2.696506 CCTCTTTTTACAGACCGGACC 58.303 52.381 9.46 0.00 0.00 4.46
4929 10842 2.074576 GCCTCTTTTTACAGACCGGAC 58.925 52.381 9.46 0.10 0.00 4.79
4930 10843 1.002773 GGCCTCTTTTTACAGACCGGA 59.997 52.381 9.46 0.00 0.00 5.14
4931 10844 1.450025 GGCCTCTTTTTACAGACCGG 58.550 55.000 0.00 0.00 0.00 5.28
4932 10845 1.450025 GGGCCTCTTTTTACAGACCG 58.550 55.000 0.84 0.00 0.00 4.79
4933 10846 1.002773 TCGGGCCTCTTTTTACAGACC 59.997 52.381 0.84 0.00 0.00 3.85
4934 10847 2.467566 TCGGGCCTCTTTTTACAGAC 57.532 50.000 0.84 0.00 0.00 3.51
4935 10848 3.071892 TCTTTCGGGCCTCTTTTTACAGA 59.928 43.478 0.84 0.00 0.00 3.41
4936 10849 3.408634 TCTTTCGGGCCTCTTTTTACAG 58.591 45.455 0.84 0.00 0.00 2.74
4937 10850 3.408634 CTCTTTCGGGCCTCTTTTTACA 58.591 45.455 0.84 0.00 0.00 2.41
4938 10851 2.747989 CCTCTTTCGGGCCTCTTTTTAC 59.252 50.000 0.84 0.00 0.00 2.01
4939 10852 2.374170 ACCTCTTTCGGGCCTCTTTTTA 59.626 45.455 0.84 0.00 0.00 1.52
4940 10853 1.145119 ACCTCTTTCGGGCCTCTTTTT 59.855 47.619 0.84 0.00 0.00 1.94
4941 10854 0.771755 ACCTCTTTCGGGCCTCTTTT 59.228 50.000 0.84 0.00 0.00 2.27
4942 10855 0.325272 GACCTCTTTCGGGCCTCTTT 59.675 55.000 0.84 0.00 0.00 2.52
4943 10856 1.984020 GACCTCTTTCGGGCCTCTT 59.016 57.895 0.84 0.00 0.00 2.85
4944 10857 3.715015 GACCTCTTTCGGGCCTCT 58.285 61.111 0.84 0.00 0.00 3.69
4951 10864 2.181021 CGGACCGGACCTCTTTCG 59.819 66.667 20.77 2.55 0.00 3.46
4962 10875 1.964373 CCAAAACAGGACCGGACCG 60.964 63.158 17.44 6.99 34.73 4.79
4963 10876 2.265904 GCCAAAACAGGACCGGACC 61.266 63.158 15.76 15.76 0.00 4.46
4964 10877 2.265904 GGCCAAAACAGGACCGGAC 61.266 63.158 9.46 0.00 0.00 4.79
4965 10878 2.114411 GGCCAAAACAGGACCGGA 59.886 61.111 9.46 0.00 0.00 5.14
4969 10882 2.203437 ACCGGGCCAAAACAGGAC 60.203 61.111 6.32 0.00 35.24 3.85
4970 10883 2.114411 GACCGGGCCAAAACAGGA 59.886 61.111 6.32 0.00 0.00 3.86
4971 10884 2.989253 GGACCGGGCCAAAACAGG 60.989 66.667 25.88 0.00 0.00 4.00
4972 10885 3.361977 CGGACCGGGCCAAAACAG 61.362 66.667 30.17 4.24 0.00 3.16
4975 10888 4.589675 AAGCGGACCGGGCCAAAA 62.590 61.111 30.17 0.00 0.00 2.44
4988 10901 2.356553 TTTCGGTCCGACCAAGCG 60.357 61.111 15.07 3.62 38.47 4.68
4989 10902 2.033194 CCTTTCGGTCCGACCAAGC 61.033 63.158 15.07 0.00 38.47 4.01
4990 10903 0.034337 TTCCTTTCGGTCCGACCAAG 59.966 55.000 15.07 15.57 38.47 3.61
4991 10904 0.688487 ATTCCTTTCGGTCCGACCAA 59.312 50.000 15.07 5.80 38.47 3.67
4992 10905 0.688487 AATTCCTTTCGGTCCGACCA 59.312 50.000 15.07 2.50 38.47 4.02
4993 10906 1.817357 AAATTCCTTTCGGTCCGACC 58.183 50.000 15.07 7.59 34.89 4.79
4994 10907 3.909776 AAAAATTCCTTTCGGTCCGAC 57.090 42.857 15.07 0.00 34.89 4.79
5018 10931 8.029522 GCCTCGTCACTATTATTCAGATAATGA 58.970 37.037 2.71 0.00 38.56 2.57
5019 10932 7.276658 GGCCTCGTCACTATTATTCAGATAATG 59.723 40.741 0.00 0.00 38.56 1.90
5020 10933 7.324178 GGCCTCGTCACTATTATTCAGATAAT 58.676 38.462 0.00 0.00 40.60 1.28
5021 10934 6.295123 GGGCCTCGTCACTATTATTCAGATAA 60.295 42.308 0.84 0.00 32.56 1.75
5022 10935 5.185249 GGGCCTCGTCACTATTATTCAGATA 59.815 44.000 0.84 0.00 0.00 1.98
5023 10936 4.021016 GGGCCTCGTCACTATTATTCAGAT 60.021 45.833 0.84 0.00 0.00 2.90
5024 10937 3.321111 GGGCCTCGTCACTATTATTCAGA 59.679 47.826 0.84 0.00 0.00 3.27
5025 10938 3.069586 TGGGCCTCGTCACTATTATTCAG 59.930 47.826 4.53 0.00 0.00 3.02
5026 10939 3.035363 TGGGCCTCGTCACTATTATTCA 58.965 45.455 4.53 0.00 0.00 2.57
5027 10940 3.654414 CTGGGCCTCGTCACTATTATTC 58.346 50.000 4.53 0.00 0.00 1.75
5028 10941 2.224305 GCTGGGCCTCGTCACTATTATT 60.224 50.000 4.53 0.00 0.00 1.40
5029 10942 1.344763 GCTGGGCCTCGTCACTATTAT 59.655 52.381 4.53 0.00 0.00 1.28
5030 10943 0.750850 GCTGGGCCTCGTCACTATTA 59.249 55.000 4.53 0.00 0.00 0.98
5031 10944 1.522569 GCTGGGCCTCGTCACTATT 59.477 57.895 4.53 0.00 0.00 1.73
5032 10945 2.435693 GGCTGGGCCTCGTCACTAT 61.436 63.158 4.53 0.00 46.69 2.12
5033 10946 3.075005 GGCTGGGCCTCGTCACTA 61.075 66.667 4.53 0.00 46.69 2.74
5049 10962 0.468226 TACCAGGAGCGCTAAATGGG 59.532 55.000 28.61 20.27 35.26 4.00
5050 10963 2.146342 CATACCAGGAGCGCTAAATGG 58.854 52.381 25.51 25.51 37.07 3.16
5051 10964 2.802816 GTCATACCAGGAGCGCTAAATG 59.197 50.000 11.50 9.63 0.00 2.32
5052 10965 2.224305 GGTCATACCAGGAGCGCTAAAT 60.224 50.000 11.50 0.00 38.42 1.40
5053 10966 1.138266 GGTCATACCAGGAGCGCTAAA 59.862 52.381 11.50 0.00 38.42 1.85
5054 10967 0.750850 GGTCATACCAGGAGCGCTAA 59.249 55.000 11.50 0.00 38.42 3.09
5055 10968 0.106167 AGGTCATACCAGGAGCGCTA 60.106 55.000 11.50 0.00 41.95 4.26
5056 10969 0.106167 TAGGTCATACCAGGAGCGCT 60.106 55.000 11.27 11.27 41.95 5.92
5057 10970 0.750850 TTAGGTCATACCAGGAGCGC 59.249 55.000 0.00 0.00 41.95 5.92
5058 10971 2.028930 GGATTAGGTCATACCAGGAGCG 60.029 54.545 0.00 0.00 41.95 5.03
5059 10972 2.972713 TGGATTAGGTCATACCAGGAGC 59.027 50.000 0.00 0.00 41.95 4.70
5060 10973 4.223923 GGATGGATTAGGTCATACCAGGAG 59.776 50.000 0.00 0.00 41.95 3.69
5061 10974 4.168101 GGATGGATTAGGTCATACCAGGA 58.832 47.826 0.00 0.00 41.95 3.86
5062 10975 3.264450 GGGATGGATTAGGTCATACCAGG 59.736 52.174 0.00 0.00 42.52 4.45
5063 10976 3.909995 TGGGATGGATTAGGTCATACCAG 59.090 47.826 3.34 0.00 46.33 4.00
5065 10978 3.264450 CCTGGGATGGATTAGGTCATACC 59.736 52.174 0.00 0.00 43.12 2.73
5066 10979 3.307762 GCCTGGGATGGATTAGGTCATAC 60.308 52.174 0.00 0.00 32.85 2.39
5067 10980 2.912956 GCCTGGGATGGATTAGGTCATA 59.087 50.000 0.00 0.00 32.85 2.15
5068 10981 1.707427 GCCTGGGATGGATTAGGTCAT 59.293 52.381 0.00 0.00 32.85 3.06
5069 10982 1.140312 GCCTGGGATGGATTAGGTCA 58.860 55.000 0.00 0.00 32.85 4.02
5070 10983 1.140312 TGCCTGGGATGGATTAGGTC 58.860 55.000 0.00 0.00 32.85 3.85
5071 10984 0.846693 GTGCCTGGGATGGATTAGGT 59.153 55.000 0.00 0.00 32.85 3.08
5072 10985 0.250467 CGTGCCTGGGATGGATTAGG 60.250 60.000 0.00 0.00 0.00 2.69
5073 10986 0.886490 GCGTGCCTGGGATGGATTAG 60.886 60.000 9.59 0.00 0.00 1.73
5074 10987 1.148273 GCGTGCCTGGGATGGATTA 59.852 57.895 9.59 0.00 0.00 1.75
5075 10988 2.124151 GCGTGCCTGGGATGGATT 60.124 61.111 9.59 0.00 0.00 3.01
5076 10989 3.410628 TGCGTGCCTGGGATGGAT 61.411 61.111 9.59 0.00 0.00 3.41
5077 10990 4.408821 GTGCGTGCCTGGGATGGA 62.409 66.667 9.59 3.21 0.00 3.41
5078 10991 4.720902 TGTGCGTGCCTGGGATGG 62.721 66.667 9.59 0.00 0.00 3.51
5079 10992 2.438975 ATGTGCGTGCCTGGGATG 60.439 61.111 2.62 2.62 0.00 3.51
5080 10993 2.124570 GATGTGCGTGCCTGGGAT 60.125 61.111 0.00 0.00 0.00 3.85
5081 10994 3.315142 GAGATGTGCGTGCCTGGGA 62.315 63.158 0.00 0.00 0.00 4.37
5082 10995 2.821366 GAGATGTGCGTGCCTGGG 60.821 66.667 0.00 0.00 0.00 4.45
5083 10996 2.046988 TGAGATGTGCGTGCCTGG 60.047 61.111 0.00 0.00 0.00 4.45
5084 10997 1.357258 GAGTGAGATGTGCGTGCCTG 61.357 60.000 0.00 0.00 0.00 4.85
5085 10998 1.079543 GAGTGAGATGTGCGTGCCT 60.080 57.895 0.00 0.00 0.00 4.75
5086 10999 2.103042 GGAGTGAGATGTGCGTGCC 61.103 63.158 0.00 0.00 0.00 5.01
5087 11000 0.950555 TTGGAGTGAGATGTGCGTGC 60.951 55.000 0.00 0.00 0.00 5.34
5088 11001 0.792640 GTTGGAGTGAGATGTGCGTG 59.207 55.000 0.00 0.00 0.00 5.34
5089 11002 0.667487 CGTTGGAGTGAGATGTGCGT 60.667 55.000 0.00 0.00 0.00 5.24
5090 11003 1.959899 GCGTTGGAGTGAGATGTGCG 61.960 60.000 0.00 0.00 0.00 5.34
5091 11004 0.671781 AGCGTTGGAGTGAGATGTGC 60.672 55.000 0.00 0.00 0.00 4.57
5092 11005 1.337167 TGAGCGTTGGAGTGAGATGTG 60.337 52.381 0.00 0.00 0.00 3.21
5093 11006 0.969149 TGAGCGTTGGAGTGAGATGT 59.031 50.000 0.00 0.00 0.00 3.06
5094 11007 1.337167 TGTGAGCGTTGGAGTGAGATG 60.337 52.381 0.00 0.00 0.00 2.90
5095 11008 0.969149 TGTGAGCGTTGGAGTGAGAT 59.031 50.000 0.00 0.00 0.00 2.75
5096 11009 0.969149 ATGTGAGCGTTGGAGTGAGA 59.031 50.000 0.00 0.00 0.00 3.27
5097 11010 1.073964 CATGTGAGCGTTGGAGTGAG 58.926 55.000 0.00 0.00 0.00 3.51
5098 11011 0.678950 TCATGTGAGCGTTGGAGTGA 59.321 50.000 0.00 0.00 0.00 3.41
5099 11012 1.395954 CATCATGTGAGCGTTGGAGTG 59.604 52.381 0.00 0.00 0.00 3.51
5100 11013 1.730501 CATCATGTGAGCGTTGGAGT 58.269 50.000 0.00 0.00 0.00 3.85
5101 11014 0.376152 GCATCATGTGAGCGTTGGAG 59.624 55.000 0.00 0.00 0.00 3.86
5102 11015 1.360931 CGCATCATGTGAGCGTTGGA 61.361 55.000 16.78 0.00 45.82 3.53
5103 11016 1.061411 CGCATCATGTGAGCGTTGG 59.939 57.895 16.78 0.00 45.82 3.77
5104 11017 4.657077 CGCATCATGTGAGCGTTG 57.343 55.556 16.78 0.00 45.82 4.10
5108 11021 3.945434 CGGCCGCATCATGTGAGC 61.945 66.667 14.67 1.39 0.00 4.26
5109 11022 2.512286 ACGGCCGCATCATGTGAG 60.512 61.111 28.58 0.00 0.00 3.51
5110 11023 2.511373 GACGGCCGCATCATGTGA 60.511 61.111 28.58 0.00 0.00 3.58
5111 11024 3.576356 GGACGGCCGCATCATGTG 61.576 66.667 28.58 0.00 0.00 3.21
5112 11025 3.740128 GAGGACGGCCGCATCATGT 62.740 63.158 28.58 2.52 39.96 3.21
5113 11026 2.969238 GAGGACGGCCGCATCATG 60.969 66.667 28.58 0.00 39.96 3.07
5114 11027 4.241555 GGAGGACGGCCGCATCAT 62.242 66.667 28.58 14.86 39.96 2.45
5116 11029 4.593864 GAGGAGGACGGCCGCATC 62.594 72.222 28.58 23.78 37.60 3.91
5122 11035 4.083862 GTGGTGGAGGAGGACGGC 62.084 72.222 0.00 0.00 0.00 5.68
5123 11036 3.760035 CGTGGTGGAGGAGGACGG 61.760 72.222 0.00 0.00 0.00 4.79
5124 11037 4.436998 GCGTGGTGGAGGAGGACG 62.437 72.222 0.00 0.00 0.00 4.79
5125 11038 2.879233 TTGCGTGGTGGAGGAGGAC 61.879 63.158 0.00 0.00 0.00 3.85
5126 11039 2.525629 TTGCGTGGTGGAGGAGGA 60.526 61.111 0.00 0.00 0.00 3.71
5127 11040 2.358737 GTTGCGTGGTGGAGGAGG 60.359 66.667 0.00 0.00 0.00 4.30
5128 11041 1.669115 CTGTTGCGTGGTGGAGGAG 60.669 63.158 0.00 0.00 0.00 3.69
5129 11042 2.425592 CTGTTGCGTGGTGGAGGA 59.574 61.111 0.00 0.00 0.00 3.71
5130 11043 3.357079 GCTGTTGCGTGGTGGAGG 61.357 66.667 0.00 0.00 0.00 4.30
5131 11044 3.357079 GGCTGTTGCGTGGTGGAG 61.357 66.667 0.00 0.00 40.82 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.