Multiple sequence alignment - TraesCS3B01G052900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G052900 chr3B 100.000 4105 0 0 1 4105 26754832 26750728 0.000000e+00 7581
1 TraesCS3B01G052900 chr3B 94.534 1555 46 20 1792 3328 14525759 14524226 0.000000e+00 2364
2 TraesCS3B01G052900 chr3B 85.383 1163 68 43 646 1752 14526873 14525757 0.000000e+00 1112
3 TraesCS3B01G052900 chr3B 86.646 322 30 5 1 319 14527510 14527199 1.090000e-90 344
4 TraesCS3B01G052900 chr3B 94.059 101 4 2 314 413 607809350 607809449 7.110000e-33 152
5 TraesCS3B01G052900 chr3B 94.898 98 4 1 318 414 719044015 719044112 7.110000e-33 152
6 TraesCS3B01G052900 chr3A 93.125 2371 104 28 1760 4097 16631437 16633781 0.000000e+00 3421
7 TraesCS3B01G052900 chr3A 83.877 1166 89 56 770 1868 16629624 16630757 0.000000e+00 1020
8 TraesCS3B01G052900 chr3A 81.884 276 20 12 490 753 16629018 16629275 5.380000e-49 206
9 TraesCS3B01G052900 chr3D 93.240 2145 102 17 1719 3837 10454754 10456881 0.000000e+00 3118
10 TraesCS3B01G052900 chr3D 83.834 1299 78 59 616 1816 10453427 10454691 0.000000e+00 1114
11 TraesCS3B01G052900 chr3D 96.040 101 3 1 318 417 603574585 603574485 3.280000e-36 163
12 TraesCS3B01G052900 chr3D 77.500 240 31 8 1 240 10452859 10453075 5.570000e-24 122
13 TraesCS3B01G052900 chr2A 89.344 1173 123 2 1935 3106 718384312 718383141 0.000000e+00 1472
14 TraesCS3B01G052900 chr2A 97.494 439 9 2 3639 4075 206315126 206315564 0.000000e+00 749
15 TraesCS3B01G052900 chr2A 87.838 518 50 5 2590 3106 1608659 1609164 2.730000e-166 595
16 TraesCS3B01G052900 chr2A 84.404 218 16 11 1011 1228 718385188 718384989 9.000000e-47 198
17 TraesCS3B01G052900 chr2B 89.201 1176 125 2 1935 3109 703623807 703622633 0.000000e+00 1467
18 TraesCS3B01G052900 chr2B 93.890 491 27 3 3442 3930 746426543 746427032 0.000000e+00 737
19 TraesCS3B01G052900 chr2B 84.404 218 16 12 1011 1228 703624675 703624476 9.000000e-47 198
20 TraesCS3B01G052900 chr2B 94.059 101 5 1 318 417 403102842 403102742 7.110000e-33 152
21 TraesCS3B01G052900 chr2D 89.031 1176 127 2 1935 3109 584257378 584256204 0.000000e+00 1456
22 TraesCS3B01G052900 chr2D 87.524 529 56 6 2590 3109 646462258 646461731 1.630000e-168 603
23 TraesCS3B01G052900 chr2D 85.321 218 14 12 1011 1228 584258230 584258031 4.160000e-50 209
24 TraesCS3B01G052900 chr2D 79.275 193 36 3 1393 1582 584257850 584257659 9.260000e-27 132
25 TraesCS3B01G052900 chrUn 92.559 766 49 7 3168 3930 291515020 291514260 0.000000e+00 1092
26 TraesCS3B01G052900 chrUn 87.645 518 59 3 2590 3106 337092337 337092850 7.600000e-167 597
27 TraesCS3B01G052900 chr6B 92.559 766 49 7 3168 3930 716183028 716182268 0.000000e+00 1092
28 TraesCS3B01G052900 chr7B 79.915 1180 219 15 1935 3105 162779681 162780851 0.000000e+00 850
29 TraesCS3B01G052900 chr7B 93.396 106 4 3 314 417 421056868 421056972 1.980000e-33 154
30 TraesCS3B01G052900 chr7A 79.220 1179 229 13 1934 3104 207901381 207900211 0.000000e+00 806
31 TraesCS3B01G052900 chr7D 79.316 1170 224 14 1941 3101 198622862 198621702 0.000000e+00 804
32 TraesCS3B01G052900 chr1B 97.722 439 8 2 3639 4075 47342543 47342981 0.000000e+00 754
33 TraesCS3B01G052900 chr1B 97.267 439 10 2 3639 4075 541799258 541798820 0.000000e+00 743
34 TraesCS3B01G052900 chr1B 91.647 419 30 4 3168 3585 329043346 329043760 3.560000e-160 575
35 TraesCS3B01G052900 chr1B 91.408 419 31 4 3168 3585 47342130 47342544 1.660000e-158 569
36 TraesCS3B01G052900 chr1B 91.408 419 31 4 3168 3585 541799671 541799257 1.660000e-158 569
37 TraesCS3B01G052900 chr5A 97.494 439 9 2 3639 4075 614151532 614151094 0.000000e+00 749
38 TraesCS3B01G052900 chr5A 91.647 419 30 4 3168 3585 614151945 614151531 3.560000e-160 575
39 TraesCS3B01G052900 chr1A 97.494 439 9 2 3639 4075 392758662 392758224 0.000000e+00 749
40 TraesCS3B01G052900 chr1A 91.408 419 31 4 3168 3585 392759075 392758661 1.660000e-158 569
41 TraesCS3B01G052900 chr4D 94.059 101 5 1 317 416 94883331 94883431 7.110000e-33 152
42 TraesCS3B01G052900 chr1D 93.269 104 6 1 315 417 421026895 421026792 7.110000e-33 152
43 TraesCS3B01G052900 chr5B 92.308 104 6 2 316 417 621211329 621211432 3.310000e-31 147
44 TraesCS3B01G052900 chr4B 91.589 107 7 2 308 413 624187492 624187387 3.310000e-31 147


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G052900 chr3B 26750728 26754832 4104 True 7581.000000 7581 100.000000 1 4105 1 chr3B.!!$R1 4104
1 TraesCS3B01G052900 chr3B 14524226 14527510 3284 True 1273.333333 2364 88.854333 1 3328 3 chr3B.!!$R2 3327
2 TraesCS3B01G052900 chr3A 16629018 16633781 4763 False 1549.000000 3421 86.295333 490 4097 3 chr3A.!!$F1 3607
3 TraesCS3B01G052900 chr3D 10452859 10456881 4022 False 1451.333333 3118 84.858000 1 3837 3 chr3D.!!$F1 3836
4 TraesCS3B01G052900 chr2A 718383141 718385188 2047 True 835.000000 1472 86.874000 1011 3106 2 chr2A.!!$R1 2095
5 TraesCS3B01G052900 chr2A 1608659 1609164 505 False 595.000000 595 87.838000 2590 3106 1 chr2A.!!$F1 516
6 TraesCS3B01G052900 chr2B 703622633 703624675 2042 True 832.500000 1467 86.802500 1011 3109 2 chr2B.!!$R2 2098
7 TraesCS3B01G052900 chr2D 646461731 646462258 527 True 603.000000 603 87.524000 2590 3109 1 chr2D.!!$R1 519
8 TraesCS3B01G052900 chr2D 584256204 584258230 2026 True 599.000000 1456 84.542333 1011 3109 3 chr2D.!!$R2 2098
9 TraesCS3B01G052900 chrUn 291514260 291515020 760 True 1092.000000 1092 92.559000 3168 3930 1 chrUn.!!$R1 762
10 TraesCS3B01G052900 chrUn 337092337 337092850 513 False 597.000000 597 87.645000 2590 3106 1 chrUn.!!$F1 516
11 TraesCS3B01G052900 chr6B 716182268 716183028 760 True 1092.000000 1092 92.559000 3168 3930 1 chr6B.!!$R1 762
12 TraesCS3B01G052900 chr7B 162779681 162780851 1170 False 850.000000 850 79.915000 1935 3105 1 chr7B.!!$F1 1170
13 TraesCS3B01G052900 chr7A 207900211 207901381 1170 True 806.000000 806 79.220000 1934 3104 1 chr7A.!!$R1 1170
14 TraesCS3B01G052900 chr7D 198621702 198622862 1160 True 804.000000 804 79.316000 1941 3101 1 chr7D.!!$R1 1160
15 TraesCS3B01G052900 chr1B 47342130 47342981 851 False 661.500000 754 94.565000 3168 4075 2 chr1B.!!$F2 907
16 TraesCS3B01G052900 chr1B 541798820 541799671 851 True 656.000000 743 94.337500 3168 4075 2 chr1B.!!$R1 907
17 TraesCS3B01G052900 chr5A 614151094 614151945 851 True 662.000000 749 94.570500 3168 4075 2 chr5A.!!$R1 907
18 TraesCS3B01G052900 chr1A 392758224 392759075 851 True 659.000000 749 94.451000 3168 4075 2 chr1A.!!$R1 907

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
226 230 0.671781 CTGGAAGCAGTGTCGGAAGG 60.672 60.0 0.0 0.0 0.0 3.46 F
1265 1955 0.466124 AATTACTCCTCCGCTCTGCC 59.534 55.0 0.0 0.0 0.0 4.85 F
1278 1968 0.390866 CTCTGCCCTACTGTGCTGTG 60.391 60.0 0.0 0.0 0.0 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1273 1963 0.247814 CGAATCGAATGTGGCACAGC 60.248 55.000 26.04 18.24 41.8 4.40 R
3095 4722 0.741326 GACGATGCTGCTACTCCTGA 59.259 55.000 0.00 0.00 0.0 3.86 R
3226 4874 1.228367 CACCCTTTCCAGCAGCAGT 60.228 57.895 0.00 0.00 0.0 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 8.915871 ATGTGTCTCATAATTATTGTTTGCAC 57.084 30.769 0.00 2.34 34.67 4.57
150 154 8.780249 ACAATATATGCGGGTGAAAGTATTTAC 58.220 33.333 0.00 0.00 39.27 2.01
161 165 7.363793 GGGTGAAAGTATTTACGTTACCCTCTA 60.364 40.741 14.74 0.00 39.27 2.43
168 172 5.869649 TTTACGTTACCCTCTAATACCCC 57.130 43.478 0.00 0.00 0.00 4.95
169 173 3.695357 ACGTTACCCTCTAATACCCCT 57.305 47.619 0.00 0.00 0.00 4.79
170 174 3.570540 ACGTTACCCTCTAATACCCCTC 58.429 50.000 0.00 0.00 0.00 4.30
171 175 3.052642 ACGTTACCCTCTAATACCCCTCA 60.053 47.826 0.00 0.00 0.00 3.86
173 177 4.591924 CGTTACCCTCTAATACCCCTCATT 59.408 45.833 0.00 0.00 0.00 2.57
174 178 5.279356 CGTTACCCTCTAATACCCCTCATTC 60.279 48.000 0.00 0.00 0.00 2.67
201 205 1.571773 GGCCACCATGGTTCTAGGGT 61.572 60.000 16.84 0.00 40.46 4.34
220 224 2.360475 GGCCCTGGAAGCAGTGTC 60.360 66.667 0.00 0.00 0.00 3.67
226 230 0.671781 CTGGAAGCAGTGTCGGAAGG 60.672 60.000 0.00 0.00 0.00 3.46
298 302 2.514803 CTGGTCGGGATTGTCCTTTTT 58.485 47.619 0.00 0.00 36.57 1.94
307 311 3.440173 GGATTGTCCTTTTTCAGATGCGA 59.560 43.478 0.00 0.00 32.53 5.10
308 312 3.896648 TTGTCCTTTTTCAGATGCGAC 57.103 42.857 0.00 0.00 0.00 5.19
313 317 3.882888 TCCTTTTTCAGATGCGACAAACT 59.117 39.130 0.00 0.00 0.00 2.66
314 318 5.049680 GTCCTTTTTCAGATGCGACAAACTA 60.050 40.000 0.00 0.00 0.00 2.24
315 319 5.529430 TCCTTTTTCAGATGCGACAAACTAA 59.471 36.000 0.00 0.00 0.00 2.24
316 320 5.853282 CCTTTTTCAGATGCGACAAACTAAG 59.147 40.000 0.00 0.00 0.00 2.18
317 321 6.371809 TTTTTCAGATGCGACAAACTAAGT 57.628 33.333 0.00 0.00 0.00 2.24
320 324 5.386958 TCAGATGCGACAAACTAAGTACT 57.613 39.130 0.00 0.00 0.00 2.73
321 325 5.399858 TCAGATGCGACAAACTAAGTACTC 58.600 41.667 0.00 0.00 0.00 2.59
322 326 4.563184 CAGATGCGACAAACTAAGTACTCC 59.437 45.833 0.00 0.00 0.00 3.85
323 327 3.308438 TGCGACAAACTAAGTACTCCC 57.692 47.619 0.00 0.00 0.00 4.30
324 328 2.895404 TGCGACAAACTAAGTACTCCCT 59.105 45.455 0.00 0.00 0.00 4.20
325 329 3.057033 TGCGACAAACTAAGTACTCCCTC 60.057 47.826 0.00 0.00 0.00 4.30
326 330 3.675502 GCGACAAACTAAGTACTCCCTCC 60.676 52.174 0.00 0.00 0.00 4.30
327 331 3.427233 CGACAAACTAAGTACTCCCTCCG 60.427 52.174 0.00 0.00 0.00 4.63
328 332 3.504375 ACAAACTAAGTACTCCCTCCGT 58.496 45.455 0.00 0.00 0.00 4.69
329 333 3.899980 ACAAACTAAGTACTCCCTCCGTT 59.100 43.478 0.00 0.00 0.00 4.44
330 334 4.021632 ACAAACTAAGTACTCCCTCCGTTC 60.022 45.833 0.00 0.00 0.00 3.95
331 335 2.732763 ACTAAGTACTCCCTCCGTTCC 58.267 52.381 0.00 0.00 0.00 3.62
332 336 2.042162 ACTAAGTACTCCCTCCGTTCCA 59.958 50.000 0.00 0.00 0.00 3.53
333 337 2.019807 AAGTACTCCCTCCGTTCCAA 57.980 50.000 0.00 0.00 0.00 3.53
334 338 2.019807 AGTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
335 339 2.332117 AGTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
336 340 2.910977 AGTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
337 341 4.098894 AGTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
338 342 4.533311 AGTACTCCCTCCGTTCCAAAATAA 59.467 41.667 0.00 0.00 0.00 1.40
339 343 3.951663 ACTCCCTCCGTTCCAAAATAAG 58.048 45.455 0.00 0.00 0.00 1.73
340 344 3.329814 ACTCCCTCCGTTCCAAAATAAGT 59.670 43.478 0.00 0.00 0.00 2.24
341 345 3.681593 TCCCTCCGTTCCAAAATAAGTG 58.318 45.455 0.00 0.00 0.00 3.16
342 346 3.073356 TCCCTCCGTTCCAAAATAAGTGT 59.927 43.478 0.00 0.00 0.00 3.55
343 347 3.439129 CCCTCCGTTCCAAAATAAGTGTC 59.561 47.826 0.00 0.00 0.00 3.67
344 348 4.324267 CCTCCGTTCCAAAATAAGTGTCT 58.676 43.478 0.00 0.00 0.00 3.41
345 349 4.760204 CCTCCGTTCCAAAATAAGTGTCTT 59.240 41.667 0.00 0.00 0.00 3.01
346 350 5.935789 CCTCCGTTCCAAAATAAGTGTCTTA 59.064 40.000 0.00 0.00 0.00 2.10
347 351 6.428771 CCTCCGTTCCAAAATAAGTGTCTTAA 59.571 38.462 0.00 0.00 0.00 1.85
348 352 7.193377 TCCGTTCCAAAATAAGTGTCTTAAC 57.807 36.000 0.00 0.00 0.00 2.01
349 353 6.993902 TCCGTTCCAAAATAAGTGTCTTAACT 59.006 34.615 0.00 0.00 0.00 2.24
350 354 7.499895 TCCGTTCCAAAATAAGTGTCTTAACTT 59.500 33.333 0.00 0.00 42.89 2.66
351 355 8.132995 CCGTTCCAAAATAAGTGTCTTAACTTT 58.867 33.333 0.00 0.00 40.77 2.66
352 356 8.953990 CGTTCCAAAATAAGTGTCTTAACTTTG 58.046 33.333 14.00 14.00 40.77 2.77
353 357 9.797556 GTTCCAAAATAAGTGTCTTAACTTTGT 57.202 29.630 16.72 0.00 40.77 2.83
389 393 9.502091 AATACAATTTGTACTAAGCTCAAGACA 57.498 29.630 11.31 0.00 35.42 3.41
390 394 7.986085 ACAATTTGTACTAAGCTCAAGACAT 57.014 32.000 0.00 0.00 0.00 3.06
391 395 8.396272 ACAATTTGTACTAAGCTCAAGACATT 57.604 30.769 0.00 0.00 0.00 2.71
392 396 8.850156 ACAATTTGTACTAAGCTCAAGACATTT 58.150 29.630 0.00 0.00 0.00 2.32
399 403 9.774742 GTACTAAGCTCAAGACATTTATTTTGG 57.225 33.333 3.19 0.00 0.00 3.28
400 404 7.830739 ACTAAGCTCAAGACATTTATTTTGGG 58.169 34.615 3.19 0.00 0.00 4.12
401 405 6.916360 AAGCTCAAGACATTTATTTTGGGA 57.084 33.333 0.00 0.00 0.00 4.37
402 406 6.272822 AGCTCAAGACATTTATTTTGGGAC 57.727 37.500 0.00 0.00 0.00 4.46
403 407 5.095490 GCTCAAGACATTTATTTTGGGACG 58.905 41.667 0.00 0.00 0.00 4.79
404 408 5.637006 TCAAGACATTTATTTTGGGACGG 57.363 39.130 0.00 0.00 0.00 4.79
405 409 5.317808 TCAAGACATTTATTTTGGGACGGA 58.682 37.500 0.00 0.00 0.00 4.69
406 410 5.414454 TCAAGACATTTATTTTGGGACGGAG 59.586 40.000 0.00 0.00 0.00 4.63
407 411 4.270008 AGACATTTATTTTGGGACGGAGG 58.730 43.478 0.00 0.00 0.00 4.30
408 412 3.361786 ACATTTATTTTGGGACGGAGGG 58.638 45.455 0.00 0.00 0.00 4.30
432 436 5.741011 AGTATTTAGCAGAAATCAACGGGA 58.259 37.500 0.29 0.00 0.00 5.14
446 450 4.861196 TCAACGGGAATTGATTGGGATTA 58.139 39.130 0.00 0.00 33.62 1.75
454 458 7.041098 CGGGAATTGATTGGGATTAGAAAGTAG 60.041 40.741 0.00 0.00 0.00 2.57
455 459 7.998964 GGGAATTGATTGGGATTAGAAAGTAGA 59.001 37.037 0.00 0.00 0.00 2.59
464 469 5.760743 GGGATTAGAAAGTAGAGTGCCAATC 59.239 44.000 0.00 0.00 0.00 2.67
471 476 1.139853 GTAGAGTGCCAATCTCAGGGG 59.860 57.143 0.00 0.00 34.73 4.79
481 486 3.256631 CCAATCTCAGGGGTTTTGAGTTG 59.743 47.826 2.57 6.44 42.11 3.16
483 488 3.943671 TCTCAGGGGTTTTGAGTTGAA 57.056 42.857 2.57 0.00 42.11 2.69
507 513 4.997395 GGTTTGATTTAGACTGAGAGTGCA 59.003 41.667 0.00 0.00 0.00 4.57
528 534 8.203485 AGTGCAAATTCAAGGTTTATTTCAGAA 58.797 29.630 0.00 0.00 0.00 3.02
686 965 4.038080 CACCGGCCCGCTGTTTTC 62.038 66.667 0.00 0.00 0.00 2.29
687 966 4.572571 ACCGGCCCGCTGTTTTCA 62.573 61.111 0.00 0.00 0.00 2.69
719 1008 0.744771 GGAGAATTCCTGTCGGTGCC 60.745 60.000 0.65 0.00 40.58 5.01
720 1009 1.079127 AGAATTCCTGTCGGTGCCG 60.079 57.895 3.94 3.94 41.35 5.69
721 1010 2.046314 AATTCCTGTCGGTGCCGG 60.046 61.111 10.94 0.00 40.25 6.13
753 1042 3.723348 GGAGTCAAACGCCGGCAC 61.723 66.667 28.98 16.89 0.00 5.01
848 1515 1.157111 CATCCCATTCCCATACCCCA 58.843 55.000 0.00 0.00 0.00 4.96
850 1517 1.150536 CCCATTCCCATACCCCACG 59.849 63.158 0.00 0.00 0.00 4.94
879 1546 3.339093 CCACCCCCACTTCCTCCC 61.339 72.222 0.00 0.00 0.00 4.30
880 1547 3.339093 CACCCCCACTTCCTCCCC 61.339 72.222 0.00 0.00 0.00 4.81
881 1548 3.552911 ACCCCCACTTCCTCCCCT 61.553 66.667 0.00 0.00 0.00 4.79
882 1549 3.017581 CCCCCACTTCCTCCCCTG 61.018 72.222 0.00 0.00 0.00 4.45
906 1585 3.181443 CCTCCTCTTCTACCTCTCTCTCC 60.181 56.522 0.00 0.00 0.00 3.71
914 1593 1.755008 CCTCTCTCTCCCCACGGAC 60.755 68.421 0.00 0.00 33.32 4.79
952 1631 2.703007 GCCTCTCTCTCTCTCTCTCTCT 59.297 54.545 0.00 0.00 0.00 3.10
953 1632 3.244044 GCCTCTCTCTCTCTCTCTCTCTC 60.244 56.522 0.00 0.00 0.00 3.20
962 1641 2.170607 CTCTCTCTCTCTCTCCTTCGGT 59.829 54.545 0.00 0.00 0.00 4.69
969 1648 1.153745 CTCTCCTTCGGTTGAGCGG 60.154 63.158 2.57 0.00 0.00 5.52
992 1671 4.247380 GATCCCTGCCGGCCTGAG 62.247 72.222 26.77 15.21 0.00 3.35
1212 1902 2.514592 TACGCCGTCTACTCCCCG 60.515 66.667 0.00 0.00 0.00 5.73
1241 1931 3.782443 GTGCCCTCCGTCCCGATT 61.782 66.667 0.00 0.00 0.00 3.34
1255 1945 3.112263 TCCCGATTCACCAATTACTCCT 58.888 45.455 0.00 0.00 0.00 3.69
1257 1947 3.467803 CCGATTCACCAATTACTCCTCC 58.532 50.000 0.00 0.00 0.00 4.30
1259 1949 2.396590 TTCACCAATTACTCCTCCGC 57.603 50.000 0.00 0.00 0.00 5.54
1260 1950 1.568504 TCACCAATTACTCCTCCGCT 58.431 50.000 0.00 0.00 0.00 5.52
1265 1955 0.466124 AATTACTCCTCCGCTCTGCC 59.534 55.000 0.00 0.00 0.00 4.85
1266 1956 1.403687 ATTACTCCTCCGCTCTGCCC 61.404 60.000 0.00 0.00 0.00 5.36
1267 1957 2.516048 TTACTCCTCCGCTCTGCCCT 62.516 60.000 0.00 0.00 0.00 5.19
1268 1958 1.642513 TACTCCTCCGCTCTGCCCTA 61.643 60.000 0.00 0.00 0.00 3.53
1269 1959 2.442272 TCCTCCGCTCTGCCCTAC 60.442 66.667 0.00 0.00 0.00 3.18
1270 1960 2.443016 CCTCCGCTCTGCCCTACT 60.443 66.667 0.00 0.00 0.00 2.57
1273 1963 2.185350 CCGCTCTGCCCTACTGTG 59.815 66.667 0.00 0.00 0.00 3.66
1278 1968 0.390866 CTCTGCCCTACTGTGCTGTG 60.391 60.000 0.00 0.00 0.00 3.66
1366 2085 4.400961 GCCCTGCTCCAGAACGCT 62.401 66.667 0.00 0.00 32.44 5.07
1388 2116 3.862402 CGTCGTCCTCCTCGTCGG 61.862 72.222 0.00 0.00 36.58 4.79
1757 3034 8.459911 AATTATTTTCCCCGGATTAGTAGTTG 57.540 34.615 0.73 0.00 0.00 3.16
1759 3036 4.914177 TTTCCCCGGATTAGTAGTTGTT 57.086 40.909 0.73 0.00 0.00 2.83
1760 3037 6.371595 TTTTCCCCGGATTAGTAGTTGTTA 57.628 37.500 0.73 0.00 0.00 2.41
1761 3038 5.603170 TTCCCCGGATTAGTAGTTGTTAG 57.397 43.478 0.73 0.00 0.00 2.34
1763 3040 5.271598 TCCCCGGATTAGTAGTTGTTAGAA 58.728 41.667 0.73 0.00 0.00 2.10
1765 3042 6.384886 TCCCCGGATTAGTAGTTGTTAGAAAT 59.615 38.462 0.73 0.00 0.00 2.17
1767 3044 7.871463 CCCCGGATTAGTAGTTGTTAGAAATAG 59.129 40.741 0.73 0.00 0.00 1.73
1768 3045 8.636213 CCCGGATTAGTAGTTGTTAGAAATAGA 58.364 37.037 0.73 0.00 0.00 1.98
1775 3052 8.015409 AGTAGTTGTTAGAAATAGAAACGTGC 57.985 34.615 0.00 0.00 0.00 5.34
1776 3053 7.871463 AGTAGTTGTTAGAAATAGAAACGTGCT 59.129 33.333 0.00 0.00 0.00 4.40
1777 3054 9.132521 GTAGTTGTTAGAAATAGAAACGTGCTA 57.867 33.333 0.00 0.00 0.00 3.49
2828 4447 2.036256 GGGGTGGTGCTGCAGATT 59.964 61.111 20.43 0.00 0.00 2.40
2870 4489 1.837439 TGGATGGCGACCAACTTCTAT 59.163 47.619 2.68 0.00 36.95 1.98
3095 4722 4.722193 CAGGCCATGGACGAACTT 57.278 55.556 18.40 0.00 0.00 2.66
3226 4874 8.712103 TGATTCTAGGACTAGTTGCTACTACTA 58.288 37.037 3.76 4.39 35.78 1.82
3280 4928 4.648762 TGATCAAAAGTGGAGGCTTCAAAA 59.351 37.500 0.00 0.00 0.00 2.44
3285 4933 5.966742 AAAGTGGAGGCTTCAAAATAGAC 57.033 39.130 0.00 0.00 0.00 2.59
3329 4978 0.984230 TCAAGGAACCTGCCCTAGTG 59.016 55.000 0.00 0.00 32.77 2.74
3360 5011 5.359576 TCTTGTTGTACAATTGTCCTTGCTT 59.640 36.000 15.85 0.00 37.48 3.91
3368 5019 6.463995 ACAATTGTCCTTGCTTCTGTAAAA 57.536 33.333 4.92 0.00 0.00 1.52
3412 5063 2.197605 AACACCCGGGAAAAAGCCG 61.198 57.895 32.02 6.93 0.00 5.52
3427 5078 1.726853 AGCCGCTACTTTGTTGCTAG 58.273 50.000 0.00 0.00 32.61 3.42
3513 5165 2.031120 CAATGTTGTGTCCAAGGTGGT 58.969 47.619 0.00 0.00 39.03 4.16
3517 5169 2.306847 GTTGTGTCCAAGGTGGTGAAT 58.693 47.619 0.00 0.00 39.03 2.57
3533 5185 4.275443 TGGTGAATTTTGGCTGAAATTTGC 59.725 37.500 0.00 0.00 38.85 3.68
3622 5275 3.021695 AGAATGATGATGGTTGCTGGTG 58.978 45.455 0.00 0.00 0.00 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 7.975616 ACATGGTGCAAACAATAATTATGAGAC 59.024 33.333 0.00 0.00 0.00 3.36
129 132 5.362263 ACGTAAATACTTTCACCCGCATAT 58.638 37.500 0.00 0.00 0.00 1.78
130 133 4.757594 ACGTAAATACTTTCACCCGCATA 58.242 39.130 0.00 0.00 0.00 3.14
131 134 3.602483 ACGTAAATACTTTCACCCGCAT 58.398 40.909 0.00 0.00 0.00 4.73
132 135 3.042871 ACGTAAATACTTTCACCCGCA 57.957 42.857 0.00 0.00 0.00 5.69
133 136 4.201714 GGTAACGTAAATACTTTCACCCGC 60.202 45.833 0.00 0.00 0.00 6.13
134 137 4.329801 GGGTAACGTAAATACTTTCACCCG 59.670 45.833 0.00 0.00 34.22 5.28
135 138 5.491070 AGGGTAACGTAAATACTTTCACCC 58.509 41.667 13.51 13.51 42.85 4.61
136 139 6.401394 AGAGGGTAACGTAAATACTTTCACC 58.599 40.000 0.00 0.00 37.60 4.02
137 140 8.986477 TTAGAGGGTAACGTAAATACTTTCAC 57.014 34.615 0.00 0.00 37.60 3.18
150 154 3.569491 TGAGGGGTATTAGAGGGTAACG 58.431 50.000 0.00 0.00 37.60 3.18
161 165 1.978580 CTAGGGCGAATGAGGGGTATT 59.021 52.381 0.00 0.00 0.00 1.89
164 168 1.766461 CCTAGGGCGAATGAGGGGT 60.766 63.158 0.00 0.00 0.00 4.95
201 205 4.020617 CACTGCTTCCAGGGCCGA 62.021 66.667 0.00 0.00 43.53 5.54
220 224 1.469940 CGTCATCTCCAACTCCTTCCG 60.470 57.143 0.00 0.00 0.00 4.30
226 230 1.134965 CCTCCACGTCATCTCCAACTC 60.135 57.143 0.00 0.00 0.00 3.01
253 257 1.209128 CACGCTTATCTAACGGGCTG 58.791 55.000 0.00 0.00 0.00 4.85
256 260 1.134907 ACCACACGCTTATCTAACGGG 60.135 52.381 0.00 0.00 35.99 5.28
258 262 2.159282 AGGACCACACGCTTATCTAACG 60.159 50.000 0.00 0.00 0.00 3.18
298 302 5.386958 AGTACTTAGTTTGTCGCATCTGA 57.613 39.130 0.00 0.00 0.00 3.27
307 311 3.504375 ACGGAGGGAGTACTTAGTTTGT 58.496 45.455 0.00 0.00 0.00 2.83
308 312 4.492611 GAACGGAGGGAGTACTTAGTTTG 58.507 47.826 0.00 0.00 0.00 2.93
313 317 2.905415 TGGAACGGAGGGAGTACTTA 57.095 50.000 0.00 0.00 0.00 2.24
314 318 2.019807 TTGGAACGGAGGGAGTACTT 57.980 50.000 0.00 0.00 0.00 2.24
315 319 2.019807 TTTGGAACGGAGGGAGTACT 57.980 50.000 0.00 0.00 0.00 2.73
316 320 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
317 321 4.533311 ACTTATTTTGGAACGGAGGGAGTA 59.467 41.667 0.00 0.00 0.00 2.59
320 324 3.073356 ACACTTATTTTGGAACGGAGGGA 59.927 43.478 0.00 0.00 0.00 4.20
321 325 3.418047 ACACTTATTTTGGAACGGAGGG 58.582 45.455 0.00 0.00 0.00 4.30
322 326 4.324267 AGACACTTATTTTGGAACGGAGG 58.676 43.478 0.00 0.00 0.00 4.30
323 327 5.941948 AAGACACTTATTTTGGAACGGAG 57.058 39.130 0.00 0.00 0.00 4.63
324 328 6.993902 AGTTAAGACACTTATTTTGGAACGGA 59.006 34.615 0.00 0.00 0.00 4.69
325 329 7.198306 AGTTAAGACACTTATTTTGGAACGG 57.802 36.000 0.00 0.00 0.00 4.44
326 330 8.953990 CAAAGTTAAGACACTTATTTTGGAACG 58.046 33.333 0.92 0.00 35.87 3.95
327 331 9.797556 ACAAAGTTAAGACACTTATTTTGGAAC 57.202 29.630 19.96 7.72 35.87 3.62
363 367 9.502091 TGTCTTGAGCTTAGTACAAATTGTATT 57.498 29.630 9.22 7.71 35.05 1.89
364 368 9.672673 ATGTCTTGAGCTTAGTACAAATTGTAT 57.327 29.630 9.22 1.91 35.05 2.29
365 369 9.502091 AATGTCTTGAGCTTAGTACAAATTGTA 57.498 29.630 1.08 1.08 0.00 2.41
366 370 7.986085 ATGTCTTGAGCTTAGTACAAATTGT 57.014 32.000 3.43 3.43 0.00 2.71
373 377 9.774742 CCAAAATAAATGTCTTGAGCTTAGTAC 57.225 33.333 0.00 0.00 0.00 2.73
374 378 8.956426 CCCAAAATAAATGTCTTGAGCTTAGTA 58.044 33.333 0.00 0.00 0.00 1.82
375 379 7.669722 TCCCAAAATAAATGTCTTGAGCTTAGT 59.330 33.333 0.00 0.00 0.00 2.24
376 380 7.970614 GTCCCAAAATAAATGTCTTGAGCTTAG 59.029 37.037 0.00 0.00 0.00 2.18
377 381 7.361713 CGTCCCAAAATAAATGTCTTGAGCTTA 60.362 37.037 0.00 0.00 0.00 3.09
378 382 6.570378 CGTCCCAAAATAAATGTCTTGAGCTT 60.570 38.462 0.00 0.00 0.00 3.74
379 383 5.106157 CGTCCCAAAATAAATGTCTTGAGCT 60.106 40.000 0.00 0.00 0.00 4.09
380 384 5.095490 CGTCCCAAAATAAATGTCTTGAGC 58.905 41.667 0.00 0.00 0.00 4.26
381 385 5.414454 TCCGTCCCAAAATAAATGTCTTGAG 59.586 40.000 0.00 0.00 0.00 3.02
382 386 5.317808 TCCGTCCCAAAATAAATGTCTTGA 58.682 37.500 0.00 0.00 0.00 3.02
383 387 5.393027 CCTCCGTCCCAAAATAAATGTCTTG 60.393 44.000 0.00 0.00 0.00 3.02
384 388 4.705023 CCTCCGTCCCAAAATAAATGTCTT 59.295 41.667 0.00 0.00 0.00 3.01
385 389 4.270008 CCTCCGTCCCAAAATAAATGTCT 58.730 43.478 0.00 0.00 0.00 3.41
386 390 3.380320 CCCTCCGTCCCAAAATAAATGTC 59.620 47.826 0.00 0.00 0.00 3.06
387 391 3.010808 TCCCTCCGTCCCAAAATAAATGT 59.989 43.478 0.00 0.00 0.00 2.71
388 392 3.626930 TCCCTCCGTCCCAAAATAAATG 58.373 45.455 0.00 0.00 0.00 2.32
389 393 3.268595 ACTCCCTCCGTCCCAAAATAAAT 59.731 43.478 0.00 0.00 0.00 1.40
390 394 2.645797 ACTCCCTCCGTCCCAAAATAAA 59.354 45.455 0.00 0.00 0.00 1.40
391 395 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
392 396 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
393 397 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
394 398 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
395 399 1.961133 AATACTCCCTCCGTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
396 400 1.961133 AAATACTCCCTCCGTCCCAA 58.039 50.000 0.00 0.00 0.00 4.12
397 401 2.674420 CTAAATACTCCCTCCGTCCCA 58.326 52.381 0.00 0.00 0.00 4.37
398 402 1.343789 GCTAAATACTCCCTCCGTCCC 59.656 57.143 0.00 0.00 0.00 4.46
399 403 2.036089 CTGCTAAATACTCCCTCCGTCC 59.964 54.545 0.00 0.00 0.00 4.79
400 404 2.957006 TCTGCTAAATACTCCCTCCGTC 59.043 50.000 0.00 0.00 0.00 4.79
401 405 3.028094 TCTGCTAAATACTCCCTCCGT 57.972 47.619 0.00 0.00 0.00 4.69
402 406 4.402056 TTTCTGCTAAATACTCCCTCCG 57.598 45.455 0.00 0.00 0.00 4.63
403 407 5.930135 TGATTTCTGCTAAATACTCCCTCC 58.070 41.667 0.00 0.00 0.00 4.30
404 408 6.018669 CGTTGATTTCTGCTAAATACTCCCTC 60.019 42.308 0.00 0.00 0.00 4.30
405 409 5.817816 CGTTGATTTCTGCTAAATACTCCCT 59.182 40.000 0.00 0.00 0.00 4.20
406 410 5.007724 CCGTTGATTTCTGCTAAATACTCCC 59.992 44.000 0.00 0.00 0.00 4.30
407 411 5.007724 CCCGTTGATTTCTGCTAAATACTCC 59.992 44.000 0.00 0.00 0.00 3.85
408 412 5.815740 TCCCGTTGATTTCTGCTAAATACTC 59.184 40.000 0.00 0.00 0.00 2.59
432 436 9.401058 CACTCTACTTTCTAATCCCAATCAATT 57.599 33.333 0.00 0.00 0.00 2.32
438 442 4.534500 TGGCACTCTACTTTCTAATCCCAA 59.466 41.667 0.00 0.00 0.00 4.12
446 450 4.081198 CCTGAGATTGGCACTCTACTTTCT 60.081 45.833 7.40 0.00 35.66 2.52
454 458 0.329596 AACCCCTGAGATTGGCACTC 59.670 55.000 0.00 0.00 35.26 3.51
455 459 0.779997 AAACCCCTGAGATTGGCACT 59.220 50.000 0.00 0.00 0.00 4.40
464 469 2.887152 CCTTCAACTCAAAACCCCTGAG 59.113 50.000 0.00 0.00 44.90 3.35
471 476 9.020813 GTCTAAATCAAACCTTCAACTCAAAAC 57.979 33.333 0.00 0.00 0.00 2.43
481 486 6.128418 GCACTCTCAGTCTAAATCAAACCTTC 60.128 42.308 0.00 0.00 0.00 3.46
483 488 5.221722 TGCACTCTCAGTCTAAATCAAACCT 60.222 40.000 0.00 0.00 0.00 3.50
528 534 9.932207 TCAATGCACATTTAATCAAGAGAAAAT 57.068 25.926 0.00 0.00 0.00 1.82
538 544 7.814107 TGTCCTTTTCTCAATGCACATTTAATC 59.186 33.333 0.00 0.00 0.00 1.75
580 620 2.418628 CCGGACTCACGCAAAATGTTAT 59.581 45.455 0.00 0.00 0.00 1.89
581 621 1.801771 CCGGACTCACGCAAAATGTTA 59.198 47.619 0.00 0.00 0.00 2.41
681 960 1.298788 CGTGCCCCAACGTGAAAAC 60.299 57.895 0.00 0.00 38.74 2.43
682 961 2.482333 CCGTGCCCCAACGTGAAAA 61.482 57.895 0.00 0.00 42.01 2.29
683 962 2.902846 CCGTGCCCCAACGTGAAA 60.903 61.111 0.00 0.00 42.01 2.69
760 1049 4.505217 CCATTGACACGCGCTCGC 62.505 66.667 5.73 3.90 39.84 5.03
761 1050 3.853330 CCCATTGACACGCGCTCG 61.853 66.667 5.73 0.00 42.43 5.03
762 1051 1.573829 TTTCCCATTGACACGCGCTC 61.574 55.000 5.73 0.73 0.00 5.03
763 1052 1.169661 TTTTCCCATTGACACGCGCT 61.170 50.000 5.73 0.00 0.00 5.92
764 1053 0.729140 CTTTTCCCATTGACACGCGC 60.729 55.000 5.73 0.00 0.00 6.86
765 1054 0.109781 CCTTTTCCCATTGACACGCG 60.110 55.000 3.53 3.53 0.00 6.01
766 1055 0.388520 GCCTTTTCCCATTGACACGC 60.389 55.000 0.00 0.00 0.00 5.34
768 1057 1.000843 GTGGCCTTTTCCCATTGACAC 59.999 52.381 3.32 0.00 34.34 3.67
876 1543 1.288335 GTAGAAGAGGAGGACAGGGGA 59.712 57.143 0.00 0.00 0.00 4.81
879 1546 2.243736 AGAGGTAGAAGAGGAGGACAGG 59.756 54.545 0.00 0.00 0.00 4.00
880 1547 3.202151 AGAGAGGTAGAAGAGGAGGACAG 59.798 52.174 0.00 0.00 0.00 3.51
881 1548 3.194620 AGAGAGGTAGAAGAGGAGGACA 58.805 50.000 0.00 0.00 0.00 4.02
882 1549 3.458487 AGAGAGAGGTAGAAGAGGAGGAC 59.542 52.174 0.00 0.00 0.00 3.85
914 1593 2.109799 CTGGCCGGCTGGATGTAG 59.890 66.667 28.56 9.49 37.49 2.74
926 1605 1.076044 AGAGAGAGAGAGGCTGGCC 60.076 63.158 3.00 3.00 0.00 5.36
962 1641 2.184322 GGATCTGTCGCCGCTCAA 59.816 61.111 0.00 0.00 0.00 3.02
1241 1931 1.480954 GAGCGGAGGAGTAATTGGTGA 59.519 52.381 0.00 0.00 0.00 4.02
1255 1945 2.037367 ACAGTAGGGCAGAGCGGA 59.963 61.111 0.00 0.00 0.00 5.54
1257 1947 2.510238 GCACAGTAGGGCAGAGCG 60.510 66.667 0.00 0.00 0.00 5.03
1259 1949 0.390866 CACAGCACAGTAGGGCAGAG 60.391 60.000 0.00 0.00 0.00 3.35
1260 1950 1.673477 CACAGCACAGTAGGGCAGA 59.327 57.895 0.00 0.00 0.00 4.26
1265 1955 0.321919 ATGTGGCACAGCACAGTAGG 60.322 55.000 26.04 0.00 41.80 3.18
1266 1956 1.466167 GAATGTGGCACAGCACAGTAG 59.534 52.381 26.04 0.00 41.80 2.57
1267 1957 1.522668 GAATGTGGCACAGCACAGTA 58.477 50.000 26.04 0.00 41.80 2.74
1268 1958 1.509644 CGAATGTGGCACAGCACAGT 61.510 55.000 26.04 4.77 41.80 3.55
1269 1959 1.208358 CGAATGTGGCACAGCACAG 59.792 57.895 26.04 11.13 41.80 3.66
1270 1960 0.606130 ATCGAATGTGGCACAGCACA 60.606 50.000 26.04 10.28 41.80 4.57
1273 1963 0.247814 CGAATCGAATGTGGCACAGC 60.248 55.000 26.04 18.24 41.80 4.40
1278 1968 3.802139 TGTTAGATCGAATCGAATGTGGC 59.198 43.478 10.12 0.00 39.99 5.01
1757 3034 9.733219 ATCTAGTAGCACGTTTCTATTTCTAAC 57.267 33.333 0.00 0.00 0.00 2.34
1759 3036 9.339850 AGATCTAGTAGCACGTTTCTATTTCTA 57.660 33.333 0.00 0.00 0.00 2.10
1760 3037 8.228035 AGATCTAGTAGCACGTTTCTATTTCT 57.772 34.615 0.00 0.00 0.00 2.52
1761 3038 8.859517 AAGATCTAGTAGCACGTTTCTATTTC 57.140 34.615 0.00 0.00 0.00 2.17
1763 3040 8.251721 ACAAAGATCTAGTAGCACGTTTCTATT 58.748 33.333 0.00 0.00 0.00 1.73
1765 3042 7.154435 ACAAAGATCTAGTAGCACGTTTCTA 57.846 36.000 0.00 0.00 0.00 2.10
1767 3044 7.988904 ATACAAAGATCTAGTAGCACGTTTC 57.011 36.000 12.01 0.00 0.00 2.78
1768 3045 8.900781 TCTATACAAAGATCTAGTAGCACGTTT 58.099 33.333 12.01 0.00 0.00 3.60
1769 3046 8.447924 TCTATACAAAGATCTAGTAGCACGTT 57.552 34.615 12.01 0.40 0.00 3.99
1770 3047 8.447924 TTCTATACAAAGATCTAGTAGCACGT 57.552 34.615 12.01 0.00 0.00 4.49
1771 3048 9.731819 TTTTCTATACAAAGATCTAGTAGCACG 57.268 33.333 12.01 0.00 0.00 5.34
2679 4286 1.373748 CGGTCACGTTGAACCCGAT 60.374 57.895 5.02 0.00 38.00 4.18
2828 4447 3.575247 ATGTTCCCCCACGGCACA 61.575 61.111 0.00 0.00 0.00 4.57
3092 4719 1.135915 CGATGCTGCTACTCCTGAAGT 59.864 52.381 0.00 0.00 42.33 3.01
3095 4722 0.741326 GACGATGCTGCTACTCCTGA 59.259 55.000 0.00 0.00 0.00 3.86
3226 4874 1.228367 CACCCTTTCCAGCAGCAGT 60.228 57.895 0.00 0.00 0.00 4.40
3280 4928 4.894784 ACATGACAGAAACAACCGTCTAT 58.105 39.130 0.00 0.00 0.00 1.98
3285 4933 3.303990 CCTCAACATGACAGAAACAACCG 60.304 47.826 0.00 0.00 0.00 4.44
3329 4978 4.454504 ACAATTGTACAACAAGACGATCCC 59.545 41.667 11.22 0.00 41.94 3.85
3360 5011 7.663081 GCATAGATGATCCTTCCATTTTACAGA 59.337 37.037 0.00 0.00 0.00 3.41
3368 5019 6.451292 AGAAAGCATAGATGATCCTTCCAT 57.549 37.500 0.00 0.00 0.00 3.41
3412 5063 3.665190 AGGACACTAGCAACAAAGTAGC 58.335 45.455 0.00 0.00 0.00 3.58
3495 5147 1.214175 TCACCACCTTGGACACAACAT 59.786 47.619 0.00 0.00 40.96 2.71
3505 5157 2.364970 TCAGCCAAAATTCACCACCTTG 59.635 45.455 0.00 0.00 0.00 3.61
3513 5165 4.880120 TGTGCAAATTTCAGCCAAAATTCA 59.120 33.333 7.00 1.13 37.75 2.57
3517 5169 3.622163 CACTGTGCAAATTTCAGCCAAAA 59.378 39.130 5.52 0.00 33.12 2.44
3533 5185 2.880890 CTGGTTCTTTCCTTCCACTGTG 59.119 50.000 0.00 0.00 0.00 3.66
3622 5275 3.455469 GGCACAGCAATCCAGGCC 61.455 66.667 0.00 0.00 0.00 5.19
3702 5373 8.099364 ACCTTGTTCATATTAAACAGTCACAG 57.901 34.615 1.80 0.00 37.86 3.66
3707 5378 9.574516 AAGAAGACCTTGTTCATATTAAACAGT 57.425 29.630 1.80 0.00 37.86 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.