Multiple sequence alignment - TraesCS3B01G052800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G052800 chr3B 100.000 3702 0 0 1 3702 26749236 26745535 0.000000e+00 6837.0
1 TraesCS3B01G052800 chr3B 87.605 1783 132 39 1604 3367 14963450 14965162 0.000000e+00 1986.0
2 TraesCS3B01G052800 chr3B 97.621 1009 20 2 1759 2767 14416046 14415042 0.000000e+00 1727.0
3 TraesCS3B01G052800 chr3B 95.946 814 29 3 1674 2485 14474540 14473729 0.000000e+00 1317.0
4 TraesCS3B01G052800 chr3B 86.038 1146 115 24 1608 2723 14547556 14548686 0.000000e+00 1188.0
5 TraesCS3B01G052800 chr3B 84.991 1166 127 32 1643 2763 14471248 14470086 0.000000e+00 1140.0
6 TraesCS3B01G052800 chr3B 95.674 601 22 3 2768 3367 14548687 14549284 0.000000e+00 963.0
7 TraesCS3B01G052800 chr3B 90.179 448 21 5 2926 3367 14414561 14414131 2.500000e-156 562.0
8 TraesCS3B01G052800 chr3B 95.872 218 9 0 3369 3586 14549977 14550194 1.640000e-93 353.0
9 TraesCS3B01G052800 chr3B 95.413 218 9 1 3369 3586 14965948 14966164 2.740000e-91 346.0
10 TraesCS3B01G052800 chr3B 93.897 213 13 0 3369 3581 26852467 26852679 4.610000e-84 322.0
11 TraesCS3B01G052800 chr3B 88.015 267 25 5 2928 3189 14415039 14414775 3.590000e-80 309.0
12 TraesCS3B01G052800 chr3B 86.415 265 29 5 2925 3185 14470083 14469822 2.180000e-72 283.0
13 TraesCS3B01G052800 chr3B 81.421 366 50 10 1247 1601 14547326 14547684 2.180000e-72 283.0
14 TraesCS3B01G052800 chr3B 92.737 179 13 0 987 1165 14475293 14475115 3.670000e-65 259.0
15 TraesCS3B01G052800 chr3B 93.491 169 10 1 3375 3542 14413385 14413217 2.210000e-62 250.0
16 TraesCS3B01G052800 chr3B 92.941 170 11 1 3198 3367 26836360 26836528 2.860000e-61 246.0
17 TraesCS3B01G052800 chr3B 89.944 179 18 0 987 1165 14471527 14471349 8.000000e-57 231.0
18 TraesCS3B01G052800 chr3B 89.444 180 18 1 987 1165 26757759 26757938 3.720000e-55 226.0
19 TraesCS3B01G052800 chr3B 79.143 350 43 15 1261 1601 26812017 26812345 8.050000e-52 215.0
20 TraesCS3B01G052800 chr3B 85.475 179 20 5 986 1158 14547096 14547274 8.170000e-42 182.0
21 TraesCS3B01G052800 chr3B 86.755 151 16 4 1459 1607 26812014 26812162 8.230000e-37 165.0
22 TraesCS3B01G052800 chr3B 88.983 118 13 0 3199 3316 14469704 14469587 2.980000e-31 147.0
23 TraesCS3B01G052800 chr3B 86.486 74 8 1 1604 1675 14474807 14474734 3.060000e-11 80.5
24 TraesCS3B01G052800 chr3A 89.712 1808 123 32 1604 3367 16621734 16619946 0.000000e+00 2250.0
25 TraesCS3B01G052800 chr3A 87.766 940 103 5 1836 2767 16662886 16663821 0.000000e+00 1088.0
26 TraesCS3B01G052800 chr3A 87.222 180 23 0 987 1166 16622184 16622005 4.850000e-49 206.0
27 TraesCS3B01G052800 chr3A 86.857 175 16 3 3375 3542 16619226 16619052 4.880000e-44 189.0
28 TraesCS3B01G052800 chr3A 84.564 149 20 2 1461 1606 16621946 16621798 1.070000e-30 145.0
29 TraesCS3B01G052800 chr3A 96.386 83 3 0 3502 3584 16618969 16618887 1.790000e-28 137.0
30 TraesCS3B01G052800 chr3A 81.988 161 11 7 987 1147 16662001 16662143 1.810000e-23 121.0
31 TraesCS3B01G052800 chr3D 89.655 1595 106 26 1604 3157 10531369 10532945 0.000000e+00 1977.0
32 TraesCS3B01G052800 chr3D 95.816 1171 40 3 1604 2765 10460274 10461444 0.000000e+00 1882.0
33 TraesCS3B01G052800 chr3D 86.778 1195 104 35 1604 2765 10410437 10409264 0.000000e+00 1282.0
34 TraesCS3B01G052800 chr3D 90.550 709 44 9 907 1606 10459436 10460130 0.000000e+00 917.0
35 TraesCS3B01G052800 chr3D 90.889 450 21 7 2925 3367 10409260 10408824 1.480000e-163 586.0
36 TraesCS3B01G052800 chr3D 90.862 383 15 9 2924 3290 10461441 10461819 2.570000e-136 496.0
37 TraesCS3B01G052800 chr3D 82.937 504 21 30 241 708 10458820 10459294 9.640000e-106 394.0
38 TraesCS3B01G052800 chr3D 97.273 220 6 0 3148 3367 10533125 10533344 1.260000e-99 374.0
39 TraesCS3B01G052800 chr3D 95.755 212 9 0 3375 3586 10534065 10534276 3.540000e-90 342.0
40 TraesCS3B01G052800 chr3D 96.117 206 8 0 3381 3586 10462700 10462905 1.650000e-88 337.0
41 TraesCS3B01G052800 chr3D 81.180 356 48 13 1260 1606 10410648 10410303 6.090000e-68 268.0
42 TraesCS3B01G052800 chr3D 80.441 363 47 14 1252 1601 10531151 10531502 4.740000e-64 255.0
43 TraesCS3B01G052800 chr3D 92.353 170 10 2 2763 2929 540564745 540564914 4.780000e-59 239.0
44 TraesCS3B01G052800 chr3D 89.503 181 19 0 987 1167 10410891 10410711 2.880000e-56 230.0
45 TraesCS3B01G052800 chr3D 87.778 180 22 0 987 1166 10530922 10531101 1.040000e-50 211.0
46 TraesCS3B01G052800 chr3D 83.436 163 22 3 1259 1416 10459983 10460145 2.980000e-31 147.0
47 TraesCS3B01G052800 chr3D 98.765 81 1 0 3622 3702 163358187 163358107 1.070000e-30 145.0
48 TraesCS3B01G052800 chr3D 75.806 310 51 19 1950 2247 10643554 10643851 6.450000e-28 135.0
49 TraesCS3B01G052800 chr3D 92.045 88 7 0 3502 3589 10408528 10408441 1.400000e-24 124.0
50 TraesCS3B01G052800 chr3D 77.914 163 30 5 1260 1416 10410450 10410288 3.040000e-16 97.1
51 TraesCS3B01G052800 chr2D 93.789 161 9 1 2764 2924 79992031 79991872 1.330000e-59 241.0
52 TraesCS3B01G052800 chr7D 93.168 161 11 0 2764 2924 454079247 454079407 1.720000e-58 237.0
53 TraesCS3B01G052800 chr7D 97.531 81 2 0 3622 3702 82975950 82976030 4.990000e-29 139.0
54 TraesCS3B01G052800 chr7D 97.531 81 2 0 3622 3702 82988804 82988884 4.990000e-29 139.0
55 TraesCS3B01G052800 chr5A 93.168 161 11 0 2764 2924 320214244 320214404 1.720000e-58 237.0
56 TraesCS3B01G052800 chr4D 91.716 169 12 1 2756 2924 401095868 401095702 2.220000e-57 233.0
57 TraesCS3B01G052800 chr4D 97.500 80 2 0 3622 3701 261299506 261299427 1.790000e-28 137.0
58 TraesCS3B01G052800 chr5D 98.750 80 1 0 3622 3701 284765800 284765879 3.850000e-30 143.0
59 TraesCS3B01G052800 chr5D 97.531 81 2 0 3622 3702 250689459 250689539 4.990000e-29 139.0
60 TraesCS3B01G052800 chr5D 97.500 80 2 0 3622 3701 235675859 235675780 1.790000e-28 137.0
61 TraesCS3B01G052800 chr1D 97.500 80 2 0 3622 3701 215193680 215193601 1.790000e-28 137.0
62 TraesCS3B01G052800 chr2A 92.391 92 6 1 3611 3702 681426902 681426812 3.000000e-26 130.0
63 TraesCS3B01G052800 chrUn 75.776 161 31 7 1995 2150 43295736 43295579 1.430000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G052800 chr3B 26745535 26749236 3701 True 6837.000000 6837 100.000000 1 3702 1 chr3B.!!$R1 3701
1 TraesCS3B01G052800 chr3B 14963450 14966164 2714 False 1166.000000 1986 91.509000 1604 3586 2 chr3B.!!$F5 1982
2 TraesCS3B01G052800 chr3B 14413217 14416046 2829 True 712.000000 1727 92.326500 1759 3542 4 chr3B.!!$R2 1783
3 TraesCS3B01G052800 chr3B 14547096 14550194 3098 False 593.800000 1188 88.896000 986 3586 5 chr3B.!!$F4 2600
4 TraesCS3B01G052800 chr3B 14469587 14475293 5706 True 493.928571 1317 89.357429 987 3316 7 chr3B.!!$R3 2329
5 TraesCS3B01G052800 chr3A 16662001 16663821 1820 False 604.500000 1088 84.877000 987 2767 2 chr3A.!!$F1 1780
6 TraesCS3B01G052800 chr3A 16618887 16622184 3297 True 585.400000 2250 88.948200 987 3584 5 chr3A.!!$R1 2597
7 TraesCS3B01G052800 chr3D 10458820 10462905 4085 False 695.500000 1882 89.953000 241 3586 6 chr3D.!!$F3 3345
8 TraesCS3B01G052800 chr3D 10530922 10534276 3354 False 631.800000 1977 90.180400 987 3586 5 chr3D.!!$F4 2599
9 TraesCS3B01G052800 chr3D 10408441 10410891 2450 True 431.183333 1282 86.384833 987 3589 6 chr3D.!!$R2 2602

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
94 95 0.036294 GACGGCTAGGGTTTCTTGCT 60.036 55.0 0.00 0.00 42.49 3.91 F
146 147 0.107410 ACGGGTTCTTTGTGACTGCA 60.107 50.0 0.00 0.00 0.00 4.41 F
543 577 0.176680 CAAGCATCTCAGGTACCGCT 59.823 55.0 6.18 4.99 0.00 5.52 F
908 971 0.255890 AGGGGAATGGATTGGTGACG 59.744 55.0 0.00 0.00 0.00 4.35 F
923 986 0.375454 TGACGCTGTTGTTTGAACGG 59.625 50.0 0.00 0.00 0.00 4.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1730 2586 0.615850 AGTAAAGAGGGGACAGCTGC 59.384 55.000 15.27 6.61 0.00 5.25 R
1869 2862 0.746659 GCAACCATTCATGTAGGGGC 59.253 55.000 7.96 0.00 0.00 5.80 R
2180 3202 1.337260 TGCCTTCTCGTGCTCTTCTTC 60.337 52.381 0.00 0.00 0.00 2.87 R
2687 7074 3.740832 CACATCAATCATACACCGCGTAT 59.259 43.478 4.92 0.00 41.74 3.06 R
2915 7779 6.100424 AGCCTCTTAGCATATACACTTCCTTT 59.900 38.462 0.00 0.00 34.23 3.11 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.168271 CTCACCATGCAACGGACG 58.832 61.111 12.25 3.51 0.00 4.79
18 19 2.358125 TCACCATGCAACGGACGG 60.358 61.111 12.25 0.00 0.00 4.79
19 20 3.430862 CACCATGCAACGGACGGG 61.431 66.667 12.25 0.00 0.00 5.28
22 23 4.101790 CATGCAACGGACGGGCAC 62.102 66.667 13.84 0.00 40.83 5.01
36 37 4.492160 GCACCGAGGCGACGATCA 62.492 66.667 0.00 0.00 35.09 2.92
37 38 2.278206 CACCGAGGCGACGATCAG 60.278 66.667 0.00 0.00 35.09 2.90
38 39 2.437895 ACCGAGGCGACGATCAGA 60.438 61.111 0.00 0.00 35.09 3.27
39 40 2.329690 CCGAGGCGACGATCAGAG 59.670 66.667 0.00 0.00 35.09 3.35
40 41 2.329690 CGAGGCGACGATCAGAGG 59.670 66.667 0.00 0.00 35.09 3.69
41 42 2.725008 GAGGCGACGATCAGAGGG 59.275 66.667 0.00 0.00 0.00 4.30
42 43 2.043852 AGGCGACGATCAGAGGGT 60.044 61.111 0.00 0.00 0.00 4.34
43 44 1.668101 GAGGCGACGATCAGAGGGTT 61.668 60.000 0.00 0.00 0.00 4.11
44 45 1.519455 GGCGACGATCAGAGGGTTG 60.519 63.158 0.00 0.00 0.00 3.77
45 46 1.519455 GCGACGATCAGAGGGTTGG 60.519 63.158 0.00 0.00 0.00 3.77
46 47 1.141881 CGACGATCAGAGGGTTGGG 59.858 63.158 0.00 0.00 0.00 4.12
47 48 1.522569 GACGATCAGAGGGTTGGGG 59.477 63.158 0.00 0.00 0.00 4.96
48 49 2.190578 CGATCAGAGGGTTGGGGC 59.809 66.667 0.00 0.00 0.00 5.80
49 50 2.669133 CGATCAGAGGGTTGGGGCA 61.669 63.158 0.00 0.00 0.00 5.36
50 51 1.225704 GATCAGAGGGTTGGGGCAG 59.774 63.158 0.00 0.00 0.00 4.85
51 52 2.276309 GATCAGAGGGTTGGGGCAGG 62.276 65.000 0.00 0.00 0.00 4.85
52 53 4.748144 CAGAGGGTTGGGGCAGGC 62.748 72.222 0.00 0.00 0.00 4.85
64 65 4.881440 GCAGGCCGGCATGGATGA 62.881 66.667 38.78 0.00 42.00 2.92
65 66 2.114625 CAGGCCGGCATGGATGAT 59.885 61.111 32.68 1.94 42.00 2.45
66 67 1.529948 CAGGCCGGCATGGATGATT 60.530 57.895 32.68 0.52 42.00 2.57
67 68 1.529948 AGGCCGGCATGGATGATTG 60.530 57.895 30.85 0.00 42.00 2.67
68 69 2.567497 GGCCGGCATGGATGATTGG 61.567 63.158 30.85 0.00 42.00 3.16
69 70 1.829533 GCCGGCATGGATGATTGGT 60.830 57.895 24.80 0.00 42.00 3.67
70 71 2.035421 CCGGCATGGATGATTGGTG 58.965 57.895 0.00 0.00 42.00 4.17
71 72 0.752743 CCGGCATGGATGATTGGTGT 60.753 55.000 0.00 0.00 42.00 4.16
72 73 0.382873 CGGCATGGATGATTGGTGTG 59.617 55.000 0.00 0.00 0.00 3.82
73 74 1.766494 GGCATGGATGATTGGTGTGA 58.234 50.000 0.00 0.00 0.00 3.58
74 75 1.406539 GGCATGGATGATTGGTGTGAC 59.593 52.381 0.00 0.00 0.00 3.67
75 76 1.064505 GCATGGATGATTGGTGTGACG 59.935 52.381 0.00 0.00 0.00 4.35
76 77 2.631267 CATGGATGATTGGTGTGACGA 58.369 47.619 0.00 0.00 0.00 4.20
77 78 2.093306 TGGATGATTGGTGTGACGAC 57.907 50.000 0.00 0.00 0.00 4.34
78 79 0.999406 GGATGATTGGTGTGACGACG 59.001 55.000 0.00 0.00 0.00 5.12
79 80 0.999406 GATGATTGGTGTGACGACGG 59.001 55.000 0.00 0.00 0.00 4.79
80 81 1.019278 ATGATTGGTGTGACGACGGC 61.019 55.000 0.00 0.00 0.00 5.68
81 82 1.374252 GATTGGTGTGACGACGGCT 60.374 57.895 0.65 0.00 0.00 5.52
82 83 0.108992 GATTGGTGTGACGACGGCTA 60.109 55.000 0.65 0.00 0.00 3.93
83 84 0.108804 ATTGGTGTGACGACGGCTAG 60.109 55.000 0.65 0.00 0.00 3.42
84 85 2.149803 TTGGTGTGACGACGGCTAGG 62.150 60.000 0.65 0.00 0.00 3.02
85 86 2.181021 GTGTGACGACGGCTAGGG 59.819 66.667 0.65 0.00 0.00 3.53
86 87 2.282674 TGTGACGACGGCTAGGGT 60.283 61.111 0.65 0.00 0.00 4.34
87 88 1.904865 TGTGACGACGGCTAGGGTT 60.905 57.895 0.65 0.00 0.00 4.11
88 89 1.291272 GTGACGACGGCTAGGGTTT 59.709 57.895 0.65 0.00 0.00 3.27
89 90 0.735287 GTGACGACGGCTAGGGTTTC 60.735 60.000 0.65 0.00 0.00 2.78
90 91 0.896940 TGACGACGGCTAGGGTTTCT 60.897 55.000 0.65 0.00 0.00 2.52
91 92 0.245813 GACGACGGCTAGGGTTTCTT 59.754 55.000 0.00 0.00 0.00 2.52
92 93 0.037605 ACGACGGCTAGGGTTTCTTG 60.038 55.000 0.00 0.00 0.00 3.02
93 94 1.359459 CGACGGCTAGGGTTTCTTGC 61.359 60.000 0.00 0.00 42.21 4.01
94 95 0.036294 GACGGCTAGGGTTTCTTGCT 60.036 55.000 0.00 0.00 42.49 3.91
95 96 1.206371 GACGGCTAGGGTTTCTTGCTA 59.794 52.381 0.00 0.00 42.49 3.49
96 97 1.066358 ACGGCTAGGGTTTCTTGCTAC 60.066 52.381 0.00 0.00 42.49 3.58
97 98 1.653151 GGCTAGGGTTTCTTGCTACG 58.347 55.000 0.00 0.00 42.49 3.51
98 99 1.007580 GCTAGGGTTTCTTGCTACGC 58.992 55.000 0.00 0.00 40.30 4.42
99 100 1.653151 CTAGGGTTTCTTGCTACGCC 58.347 55.000 0.00 0.00 0.00 5.68
100 101 0.108520 TAGGGTTTCTTGCTACGCCG 60.109 55.000 0.00 0.00 0.00 6.46
101 102 1.375013 GGGTTTCTTGCTACGCCGA 60.375 57.895 0.00 0.00 0.00 5.54
102 103 1.632948 GGGTTTCTTGCTACGCCGAC 61.633 60.000 0.00 0.00 0.00 4.79
103 104 0.669625 GGTTTCTTGCTACGCCGACT 60.670 55.000 0.00 0.00 0.00 4.18
104 105 0.714439 GTTTCTTGCTACGCCGACTC 59.286 55.000 0.00 0.00 0.00 3.36
105 106 0.315886 TTTCTTGCTACGCCGACTCA 59.684 50.000 0.00 0.00 0.00 3.41
106 107 0.388134 TTCTTGCTACGCCGACTCAC 60.388 55.000 0.00 0.00 0.00 3.51
107 108 1.805945 CTTGCTACGCCGACTCACC 60.806 63.158 0.00 0.00 0.00 4.02
108 109 2.214181 CTTGCTACGCCGACTCACCT 62.214 60.000 0.00 0.00 0.00 4.00
109 110 2.102553 GCTACGCCGACTCACCTC 59.897 66.667 0.00 0.00 0.00 3.85
110 111 2.799371 CTACGCCGACTCACCTCC 59.201 66.667 0.00 0.00 0.00 4.30
111 112 1.749638 CTACGCCGACTCACCTCCT 60.750 63.158 0.00 0.00 0.00 3.69
112 113 1.994507 CTACGCCGACTCACCTCCTG 61.995 65.000 0.00 0.00 0.00 3.86
113 114 2.473891 TACGCCGACTCACCTCCTGA 62.474 60.000 0.00 0.00 0.00 3.86
114 115 2.418910 CGCCGACTCACCTCCTGAT 61.419 63.158 0.00 0.00 0.00 2.90
115 116 1.142748 GCCGACTCACCTCCTGATG 59.857 63.158 0.00 0.00 0.00 3.07
116 117 1.819229 CCGACTCACCTCCTGATGG 59.181 63.158 0.00 0.00 0.00 3.51
117 118 0.972983 CCGACTCACCTCCTGATGGT 60.973 60.000 0.00 0.00 38.53 3.55
118 119 0.898320 CGACTCACCTCCTGATGGTT 59.102 55.000 0.00 0.00 35.28 3.67
119 120 1.276421 CGACTCACCTCCTGATGGTTT 59.724 52.381 0.00 0.00 35.28 3.27
120 121 2.289694 CGACTCACCTCCTGATGGTTTT 60.290 50.000 0.00 0.00 35.28 2.43
121 122 3.756117 GACTCACCTCCTGATGGTTTTT 58.244 45.455 0.00 0.00 35.28 1.94
142 143 3.768468 TTTTGACGGGTTCTTTGTGAC 57.232 42.857 0.00 0.00 0.00 3.67
143 144 2.702592 TTGACGGGTTCTTTGTGACT 57.297 45.000 0.00 0.00 0.00 3.41
144 145 1.948104 TGACGGGTTCTTTGTGACTG 58.052 50.000 0.00 0.00 0.00 3.51
145 146 0.586802 GACGGGTTCTTTGTGACTGC 59.413 55.000 0.00 0.00 0.00 4.40
146 147 0.107410 ACGGGTTCTTTGTGACTGCA 60.107 50.000 0.00 0.00 0.00 4.41
147 148 0.588252 CGGGTTCTTTGTGACTGCAG 59.412 55.000 13.48 13.48 0.00 4.41
148 149 0.954452 GGGTTCTTTGTGACTGCAGG 59.046 55.000 19.93 0.00 0.00 4.85
149 150 1.680338 GGTTCTTTGTGACTGCAGGT 58.320 50.000 19.93 3.31 0.00 4.00
150 151 2.024414 GGTTCTTTGTGACTGCAGGTT 58.976 47.619 19.93 0.00 0.00 3.50
151 152 2.427095 GGTTCTTTGTGACTGCAGGTTT 59.573 45.455 19.93 0.00 0.00 3.27
152 153 3.119137 GGTTCTTTGTGACTGCAGGTTTT 60.119 43.478 19.93 0.00 0.00 2.43
153 154 4.494484 GTTCTTTGTGACTGCAGGTTTTT 58.506 39.130 19.93 0.00 0.00 1.94
172 173 4.635833 TTTTTAGCGGTTCGGTTTTCTT 57.364 36.364 0.00 0.00 38.83 2.52
173 174 4.635833 TTTTAGCGGTTCGGTTTTCTTT 57.364 36.364 0.00 0.00 38.83 2.52
174 175 4.635833 TTTAGCGGTTCGGTTTTCTTTT 57.364 36.364 0.00 0.00 38.83 2.27
175 176 4.635833 TTAGCGGTTCGGTTTTCTTTTT 57.364 36.364 0.00 0.00 38.83 1.94
202 203 7.924103 TTTTCTTTTAGATTTTGAGCGGTTC 57.076 32.000 0.00 0.00 0.00 3.62
203 204 5.277601 TCTTTTAGATTTTGAGCGGTTCG 57.722 39.130 0.00 0.00 0.00 3.95
204 205 4.753107 TCTTTTAGATTTTGAGCGGTTCGT 59.247 37.500 0.00 0.00 0.00 3.85
205 206 4.398549 TTTAGATTTTGAGCGGTTCGTG 57.601 40.909 0.00 0.00 0.00 4.35
206 207 1.156736 AGATTTTGAGCGGTTCGTGG 58.843 50.000 0.00 0.00 0.00 4.94
207 208 0.872388 GATTTTGAGCGGTTCGTGGT 59.128 50.000 0.00 0.00 0.00 4.16
208 209 0.591170 ATTTTGAGCGGTTCGTGGTG 59.409 50.000 0.00 0.00 0.00 4.17
209 210 1.440938 TTTTGAGCGGTTCGTGGTGG 61.441 55.000 0.00 0.00 0.00 4.61
210 211 2.596553 TTTGAGCGGTTCGTGGTGGT 62.597 55.000 0.00 0.00 0.00 4.16
211 212 1.746322 TTGAGCGGTTCGTGGTGGTA 61.746 55.000 0.00 0.00 0.00 3.25
212 213 1.445582 GAGCGGTTCGTGGTGGTAG 60.446 63.158 0.00 0.00 0.00 3.18
213 214 2.433664 GCGGTTCGTGGTGGTAGG 60.434 66.667 0.00 0.00 0.00 3.18
214 215 3.053828 CGGTTCGTGGTGGTAGGT 58.946 61.111 0.00 0.00 0.00 3.08
215 216 1.876497 GCGGTTCGTGGTGGTAGGTA 61.876 60.000 0.00 0.00 0.00 3.08
216 217 0.819582 CGGTTCGTGGTGGTAGGTAT 59.180 55.000 0.00 0.00 0.00 2.73
217 218 2.023673 CGGTTCGTGGTGGTAGGTATA 58.976 52.381 0.00 0.00 0.00 1.47
218 219 2.223572 CGGTTCGTGGTGGTAGGTATAC 60.224 54.545 0.00 0.00 0.00 1.47
219 220 3.026694 GGTTCGTGGTGGTAGGTATACT 58.973 50.000 2.25 0.00 32.12 2.12
220 221 4.207165 GGTTCGTGGTGGTAGGTATACTA 58.793 47.826 2.25 0.00 32.12 1.82
221 222 4.276926 GGTTCGTGGTGGTAGGTATACTAG 59.723 50.000 2.25 0.00 30.77 2.57
222 223 4.090761 TCGTGGTGGTAGGTATACTAGG 57.909 50.000 2.25 0.00 30.77 3.02
223 224 3.459598 TCGTGGTGGTAGGTATACTAGGT 59.540 47.826 2.25 0.00 30.77 3.08
224 225 4.658435 TCGTGGTGGTAGGTATACTAGGTA 59.342 45.833 2.25 0.00 30.77 3.08
225 226 4.999950 CGTGGTGGTAGGTATACTAGGTAG 59.000 50.000 2.25 0.00 30.77 3.18
226 227 5.455326 CGTGGTGGTAGGTATACTAGGTAGT 60.455 48.000 2.25 0.00 40.24 2.73
227 228 6.239600 CGTGGTGGTAGGTATACTAGGTAGTA 60.240 46.154 2.25 0.00 42.43 1.82
228 229 7.164803 GTGGTGGTAGGTATACTAGGTAGTAG 58.835 46.154 2.25 0.00 41.62 2.57
229 230 6.273260 TGGTGGTAGGTATACTAGGTAGTAGG 59.727 46.154 2.25 0.00 41.62 3.18
230 231 6.273495 GGTGGTAGGTATACTAGGTAGTAGGT 59.727 46.154 2.25 0.00 41.62 3.08
231 232 7.202232 GGTGGTAGGTATACTAGGTAGTAGGTT 60.202 44.444 2.25 0.00 41.62 3.50
232 233 7.663493 GTGGTAGGTATACTAGGTAGTAGGTTG 59.337 44.444 2.25 0.00 41.62 3.77
233 234 7.350921 TGGTAGGTATACTAGGTAGTAGGTTGT 59.649 40.741 2.25 0.00 41.62 3.32
234 235 7.663493 GGTAGGTATACTAGGTAGTAGGTTGTG 59.337 44.444 2.25 0.00 41.62 3.33
235 236 7.218314 AGGTATACTAGGTAGTAGGTTGTGT 57.782 40.000 2.25 0.00 41.62 3.72
236 237 8.337118 AGGTATACTAGGTAGTAGGTTGTGTA 57.663 38.462 2.25 0.00 41.62 2.90
237 238 8.435982 AGGTATACTAGGTAGTAGGTTGTGTAG 58.564 40.741 2.25 0.00 41.62 2.74
238 239 8.432805 GGTATACTAGGTAGTAGGTTGTGTAGA 58.567 40.741 2.25 0.00 41.62 2.59
239 240 9.487790 GTATACTAGGTAGTAGGTTGTGTAGAG 57.512 40.741 3.39 0.00 41.62 2.43
270 271 3.020647 CCCATACCCAGCCCACCA 61.021 66.667 0.00 0.00 0.00 4.17
274 275 0.468029 CATACCCAGCCCACCATTCC 60.468 60.000 0.00 0.00 0.00 3.01
277 278 2.311854 CCCAGCCCACCATTCCTCT 61.312 63.158 0.00 0.00 0.00 3.69
278 279 1.225704 CCAGCCCACCATTCCTCTC 59.774 63.158 0.00 0.00 0.00 3.20
279 280 1.565390 CCAGCCCACCATTCCTCTCA 61.565 60.000 0.00 0.00 0.00 3.27
280 281 0.393537 CAGCCCACCATTCCTCTCAC 60.394 60.000 0.00 0.00 0.00 3.51
281 282 0.842030 AGCCCACCATTCCTCTCACA 60.842 55.000 0.00 0.00 0.00 3.58
282 283 0.678048 GCCCACCATTCCTCTCACAC 60.678 60.000 0.00 0.00 0.00 3.82
284 285 0.391661 CCACCATTCCTCTCACACCG 60.392 60.000 0.00 0.00 0.00 4.94
289 290 0.615331 ATTCCTCTCACACCGCACAT 59.385 50.000 0.00 0.00 0.00 3.21
291 292 1.448540 CCTCTCACACCGCACATCC 60.449 63.158 0.00 0.00 0.00 3.51
292 293 1.807165 CTCTCACACCGCACATCCG 60.807 63.158 0.00 0.00 0.00 4.18
293 294 2.048222 CTCACACCGCACATCCGT 60.048 61.111 0.00 0.00 0.00 4.69
294 295 2.048597 TCACACCGCACATCCGTC 60.049 61.111 0.00 0.00 0.00 4.79
295 296 2.356913 CACACCGCACATCCGTCA 60.357 61.111 0.00 0.00 0.00 4.35
297 298 2.048222 CACCGCACATCCGTCAGT 60.048 61.111 0.00 0.00 0.00 3.41
312 313 4.680537 AGTCCGTCGCTCCACCCT 62.681 66.667 0.00 0.00 0.00 4.34
337 338 4.824515 CCGTCGCCTCCTCCTCCT 62.825 72.222 0.00 0.00 0.00 3.69
404 415 4.847444 GAGGGAGCAGCGGCCTTC 62.847 72.222 4.82 5.67 42.56 3.46
435 446 2.443016 CCCCTCCGGAGAGAGTGG 60.443 72.222 33.39 23.14 43.39 4.00
487 521 1.883084 GCCATGGCGACTAGTTCCG 60.883 63.158 23.48 0.00 0.00 4.30
493 527 2.202756 CGACTAGTTCCGGCAGCC 60.203 66.667 0.00 0.00 0.00 4.85
503 537 3.124921 CGGCAGCCGGTAAACCTG 61.125 66.667 27.32 1.94 44.15 4.00
543 577 0.176680 CAAGCATCTCAGGTACCGCT 59.823 55.000 6.18 4.99 0.00 5.52
544 578 1.409064 CAAGCATCTCAGGTACCGCTA 59.591 52.381 6.18 0.00 0.00 4.26
545 579 1.033574 AGCATCTCAGGTACCGCTAC 58.966 55.000 6.18 0.00 0.00 3.58
546 580 1.033574 GCATCTCAGGTACCGCTACT 58.966 55.000 6.18 0.00 0.00 2.57
554 588 2.100916 CAGGTACCGCTACTGCTACATT 59.899 50.000 6.18 0.00 36.97 2.71
568 602 2.042162 GCTACATTCCATCCCATCCCAT 59.958 50.000 0.00 0.00 0.00 4.00
589 623 6.138967 CCATGGGAAGAATAAATTTCTCCCT 58.861 40.000 2.85 6.78 37.09 4.20
590 624 6.612863 CCATGGGAAGAATAAATTTCTCCCTT 59.387 38.462 2.85 11.83 37.09 3.95
591 625 7.126268 CCATGGGAAGAATAAATTTCTCCCTTT 59.874 37.037 2.85 8.00 37.09 3.11
616 650 6.701432 TTTTTACTGCTTCTTCGCTACTAC 57.299 37.500 0.00 0.00 0.00 2.73
617 651 5.640189 TTTACTGCTTCTTCGCTACTACT 57.360 39.130 0.00 0.00 0.00 2.57
618 652 5.640189 TTACTGCTTCTTCGCTACTACTT 57.360 39.130 0.00 0.00 0.00 2.24
619 653 6.748333 TTACTGCTTCTTCGCTACTACTTA 57.252 37.500 0.00 0.00 0.00 2.24
620 654 4.984205 ACTGCTTCTTCGCTACTACTTAC 58.016 43.478 0.00 0.00 0.00 2.34
621 655 4.701171 ACTGCTTCTTCGCTACTACTTACT 59.299 41.667 0.00 0.00 0.00 2.24
622 656 5.879223 ACTGCTTCTTCGCTACTACTTACTA 59.121 40.000 0.00 0.00 0.00 1.82
641 675 4.386413 GCTGTACTGCCTGCAACT 57.614 55.556 13.37 0.00 0.00 3.16
667 701 1.723608 CGCATCGTCCTCTGCTCTCT 61.724 60.000 0.00 0.00 36.23 3.10
668 702 1.313772 GCATCGTCCTCTGCTCTCTA 58.686 55.000 0.00 0.00 35.49 2.43
673 707 1.939934 CGTCCTCTGCTCTCTACTGAG 59.060 57.143 0.00 0.00 41.51 3.35
693 727 2.618241 AGTTGATCAAGAAAGCAACGCA 59.382 40.909 8.80 0.00 43.85 5.24
710 773 3.801698 ACGCAATTCAGCTCATGTAGAT 58.198 40.909 0.00 0.00 0.00 1.98
720 783 3.055602 AGCTCATGTAGATGCACTGAACA 60.056 43.478 0.00 0.00 0.00 3.18
721 784 3.686241 GCTCATGTAGATGCACTGAACAA 59.314 43.478 0.00 0.00 0.00 2.83
747 810 2.572290 ACCCTGTGTGAAACTTAGCAC 58.428 47.619 0.00 0.00 38.04 4.40
748 811 2.092646 ACCCTGTGTGAAACTTAGCACA 60.093 45.455 0.00 0.00 42.25 4.57
749 812 2.948979 CCCTGTGTGAAACTTAGCACAA 59.051 45.455 0.00 0.00 45.53 3.33
750 813 3.569701 CCCTGTGTGAAACTTAGCACAAT 59.430 43.478 0.00 0.00 45.53 2.71
751 814 4.539870 CCTGTGTGAAACTTAGCACAATG 58.460 43.478 0.00 0.00 45.53 2.82
752 815 4.036734 CCTGTGTGAAACTTAGCACAATGT 59.963 41.667 0.00 0.00 45.53 2.71
753 816 5.238432 CCTGTGTGAAACTTAGCACAATGTA 59.762 40.000 0.00 0.00 45.53 2.29
754 817 6.299023 TGTGTGAAACTTAGCACAATGTAG 57.701 37.500 0.00 0.00 45.53 2.74
755 818 6.052360 TGTGTGAAACTTAGCACAATGTAGA 58.948 36.000 0.00 0.00 45.53 2.59
756 819 6.710295 TGTGTGAAACTTAGCACAATGTAGAT 59.290 34.615 0.00 0.00 45.53 1.98
757 820 7.017645 GTGTGAAACTTAGCACAATGTAGATG 58.982 38.462 0.00 0.00 45.53 2.90
758 821 6.024049 GTGAAACTTAGCACAATGTAGATGC 58.976 40.000 0.00 0.00 39.74 3.91
759 822 4.864916 AACTTAGCACAATGTAGATGCG 57.135 40.909 0.00 0.00 44.25 4.73
760 823 2.609459 ACTTAGCACAATGTAGATGCGC 59.391 45.455 0.00 0.00 44.25 6.09
761 824 1.581934 TAGCACAATGTAGATGCGCC 58.418 50.000 4.18 0.00 44.25 6.53
762 825 1.097547 AGCACAATGTAGATGCGCCC 61.098 55.000 4.18 0.00 44.25 6.13
763 826 1.643292 CACAATGTAGATGCGCCCG 59.357 57.895 4.18 0.00 0.00 6.13
764 827 2.180204 ACAATGTAGATGCGCCCGC 61.180 57.895 4.18 5.60 42.35 6.13
765 828 2.591715 AATGTAGATGCGCCCGCC 60.592 61.111 4.18 0.00 41.09 6.13
766 829 4.626081 ATGTAGATGCGCCCGCCC 62.626 66.667 4.18 2.31 41.09 6.13
768 831 4.971125 GTAGATGCGCCCGCCCTC 62.971 72.222 4.18 7.16 41.09 4.30
791 854 4.953667 TGTATTGTTGCTTTTCCATTGCA 58.046 34.783 0.00 0.00 34.69 4.08
793 856 5.466058 TGTATTGTTGCTTTTCCATTGCAAG 59.534 36.000 4.94 0.00 45.55 4.01
796 859 4.260170 TGTTGCTTTTCCATTGCAAGTTT 58.740 34.783 4.94 0.00 45.55 2.66
797 860 4.094590 TGTTGCTTTTCCATTGCAAGTTTG 59.905 37.500 4.94 0.00 45.55 2.93
799 862 3.118482 TGCTTTTCCATTGCAAGTTTGGA 60.118 39.130 14.87 14.87 37.76 3.53
806 869 4.405358 TCCATTGCAAGTTTGGAAGAAACT 59.595 37.500 16.20 0.00 41.77 2.66
812 875 5.126869 TGCAAGTTTGGAAGAAACTCATGAA 59.873 36.000 0.00 0.00 39.36 2.57
813 876 5.689068 GCAAGTTTGGAAGAAACTCATGAAG 59.311 40.000 0.00 0.00 39.36 3.02
814 877 5.444663 AGTTTGGAAGAAACTCATGAAGC 57.555 39.130 0.00 0.00 35.76 3.86
815 878 5.136105 AGTTTGGAAGAAACTCATGAAGCT 58.864 37.500 0.00 0.00 35.76 3.74
816 879 5.595952 AGTTTGGAAGAAACTCATGAAGCTT 59.404 36.000 0.00 0.00 35.76 3.74
817 880 6.097412 AGTTTGGAAGAAACTCATGAAGCTTT 59.903 34.615 0.00 0.00 35.76 3.51
818 881 6.469782 TTGGAAGAAACTCATGAAGCTTTT 57.530 33.333 0.00 0.00 0.00 2.27
819 882 6.469782 TGGAAGAAACTCATGAAGCTTTTT 57.530 33.333 0.00 0.00 0.00 1.94
836 899 2.543777 TTTTCTAGCTTGTGCCGAGT 57.456 45.000 0.00 0.00 40.80 4.18
837 900 3.671008 TTTTCTAGCTTGTGCCGAGTA 57.329 42.857 0.00 0.00 40.80 2.59
838 901 3.671008 TTTCTAGCTTGTGCCGAGTAA 57.329 42.857 0.00 0.00 40.80 2.24
839 902 3.887621 TTCTAGCTTGTGCCGAGTAAT 57.112 42.857 0.00 0.00 40.80 1.89
840 903 4.994907 TTCTAGCTTGTGCCGAGTAATA 57.005 40.909 0.00 0.00 40.80 0.98
841 904 4.994907 TCTAGCTTGTGCCGAGTAATAA 57.005 40.909 0.00 0.00 40.80 1.40
845 908 1.593006 CTTGTGCCGAGTAATAAGCCG 59.407 52.381 0.00 0.00 0.00 5.52
849 912 1.066716 TGCCGAGTAATAAGCCGTTGT 60.067 47.619 0.00 0.00 0.00 3.32
858 921 3.678056 ATAAGCCGTTGTCACTTCAGA 57.322 42.857 0.00 0.00 0.00 3.27
891 954 8.988064 ATTATCAGTATACGCTATGAAACAGG 57.012 34.615 0.00 0.00 0.00 4.00
892 955 5.196341 TCAGTATACGCTATGAAACAGGG 57.804 43.478 0.00 0.00 0.00 4.45
893 956 4.038763 TCAGTATACGCTATGAAACAGGGG 59.961 45.833 0.00 0.00 0.00 4.79
894 957 4.038763 CAGTATACGCTATGAAACAGGGGA 59.961 45.833 0.00 0.00 0.00 4.81
895 958 4.652421 AGTATACGCTATGAAACAGGGGAA 59.348 41.667 0.00 0.00 0.00 3.97
896 959 4.706842 ATACGCTATGAAACAGGGGAAT 57.293 40.909 0.00 0.00 0.00 3.01
897 960 2.643551 ACGCTATGAAACAGGGGAATG 58.356 47.619 0.00 0.00 0.00 2.67
898 961 1.949525 CGCTATGAAACAGGGGAATGG 59.050 52.381 0.00 0.00 0.00 3.16
899 962 2.421388 CGCTATGAAACAGGGGAATGGA 60.421 50.000 0.00 0.00 0.00 3.41
900 963 3.748668 CGCTATGAAACAGGGGAATGGAT 60.749 47.826 0.00 0.00 0.00 3.41
901 964 4.218312 GCTATGAAACAGGGGAATGGATT 58.782 43.478 0.00 0.00 0.00 3.01
902 965 4.038402 GCTATGAAACAGGGGAATGGATTG 59.962 45.833 0.00 0.00 0.00 2.67
903 966 2.818921 TGAAACAGGGGAATGGATTGG 58.181 47.619 0.00 0.00 0.00 3.16
904 967 2.111613 TGAAACAGGGGAATGGATTGGT 59.888 45.455 0.00 0.00 0.00 3.67
905 968 2.236489 AACAGGGGAATGGATTGGTG 57.764 50.000 0.00 0.00 0.00 4.17
906 969 1.381867 ACAGGGGAATGGATTGGTGA 58.618 50.000 0.00 0.00 0.00 4.02
907 970 1.005924 ACAGGGGAATGGATTGGTGAC 59.994 52.381 0.00 0.00 0.00 3.67
908 971 0.255890 AGGGGAATGGATTGGTGACG 59.744 55.000 0.00 0.00 0.00 4.35
909 972 1.384222 GGGGAATGGATTGGTGACGC 61.384 60.000 0.00 0.00 0.00 5.19
910 973 0.394352 GGGAATGGATTGGTGACGCT 60.394 55.000 0.00 0.00 0.00 5.07
911 974 0.734889 GGAATGGATTGGTGACGCTG 59.265 55.000 0.00 0.00 0.00 5.18
912 975 1.453155 GAATGGATTGGTGACGCTGT 58.547 50.000 0.00 0.00 0.00 4.40
920 983 1.454201 TGGTGACGCTGTTGTTTGAA 58.546 45.000 0.00 0.00 0.00 2.69
923 986 0.375454 TGACGCTGTTGTTTGAACGG 59.625 50.000 0.00 0.00 0.00 4.44
971 1037 3.996150 ATTGGAATATCAAGCAAGGCG 57.004 42.857 0.00 0.00 0.00 5.52
972 1038 1.679139 TGGAATATCAAGCAAGGCGG 58.321 50.000 0.00 0.00 0.00 6.13
977 1043 3.560636 ATATCAAGCAAGGCGGTACTT 57.439 42.857 0.00 0.00 0.00 2.24
991 1057 4.084171 GGCGGTACTTGTAACTTTGAGTTC 60.084 45.833 0.00 0.00 39.51 3.01
993 1059 5.107568 GCGGTACTTGTAACTTTGAGTTCTC 60.108 44.000 0.00 0.00 39.51 2.87
1010 1076 3.576356 CGTGGCGATGGATGGTGC 61.576 66.667 0.00 0.00 0.00 5.01
1045 1111 2.783288 CGAGTAGAAGCCCCGGGAC 61.783 68.421 26.32 11.88 0.00 4.46
1049 1115 2.938511 TAGAAGCCCCGGGACAGGA 61.939 63.158 26.32 0.00 0.00 3.86
1126 1198 0.462759 CGTCTGCTTTCATCCCCTCC 60.463 60.000 0.00 0.00 0.00 4.30
1147 1219 3.008330 CGACCTCCGATATACCAGGTAG 58.992 54.545 5.31 0.00 39.49 3.18
1148 1220 3.354467 GACCTCCGATATACCAGGTAGG 58.646 54.545 5.31 3.06 39.49 3.18
1159 1593 2.024176 CCAGGTAGGTACATGTGCAC 57.976 55.000 16.11 10.75 36.35 4.57
1167 1601 6.990349 AGGTAGGTACATGTGCACATATTTAC 59.010 38.462 30.92 26.80 34.26 2.01
1168 1602 6.764085 GGTAGGTACATGTGCACATATTTACA 59.236 38.462 30.92 13.17 34.26 2.41
1182 1624 9.186323 GCACATATTTACATGACACTAGTAGAG 57.814 37.037 3.59 0.00 0.00 2.43
1189 1631 5.445069 ACATGACACTAGTAGAGAGCTCAT 58.555 41.667 17.77 6.59 0.00 2.90
1253 1711 3.221771 CTCTCAGACCTCCCATGAGTAG 58.778 54.545 0.00 0.00 41.01 2.57
1410 1875 3.741245 TCTAGTCTACAGCTGTTCCCT 57.259 47.619 27.06 18.99 0.00 4.20
1411 1876 4.857130 TCTAGTCTACAGCTGTTCCCTA 57.143 45.455 27.06 19.08 0.00 3.53
1412 1877 4.783055 TCTAGTCTACAGCTGTTCCCTAG 58.217 47.826 27.06 25.99 0.00 3.02
1471 1936 6.972328 ACACAACACAATGTTACTTGCTAAAG 59.028 34.615 0.00 0.00 38.77 1.85
1488 1953 7.117241 TGCTAAAGAACAGTTTATTGAGACG 57.883 36.000 0.00 0.00 0.00 4.18
1489 1954 6.147164 TGCTAAAGAACAGTTTATTGAGACGG 59.853 38.462 0.00 0.00 0.00 4.79
1490 1955 5.358298 AAAGAACAGTTTATTGAGACGGC 57.642 39.130 0.00 0.00 0.00 5.68
1509 1974 2.630098 GGCATGGATCAGAGTAGCTACA 59.370 50.000 25.28 5.35 0.00 2.74
1531 1997 3.485743 AGTCGCTGAAATTTTGTTTTCGC 59.514 39.130 0.00 0.00 38.23 4.70
1541 2041 9.474920 TGAAATTTTGTTTTCGCAGAGAATTAT 57.525 25.926 0.00 0.00 38.86 1.28
1730 2586 6.570692 ACTATGTACACCATTTTCTAGTCCG 58.429 40.000 0.00 0.00 34.86 4.79
1869 2862 9.897744 CCAATATGTTGCATATACCAAAACTAG 57.102 33.333 0.00 0.00 33.90 2.57
2180 3202 2.691011 GAGAAGCTCACCTACTACCAGG 59.309 54.545 0.00 0.00 41.87 4.45
2584 6971 5.717119 AGGGATACAACTTAATTCTGCCT 57.283 39.130 0.00 0.00 39.74 4.75
2687 7074 3.010027 TGAGCCCATATGTCTGAAACCAA 59.990 43.478 1.24 0.00 0.00 3.67
2742 7606 2.813908 GACGTTCGCGGCCTTCAT 60.814 61.111 6.13 0.00 44.30 2.57
2922 7786 9.379791 ACGACTTATATTTAGGAACAAAGGAAG 57.620 33.333 0.00 0.00 0.00 3.46
2999 7876 4.947388 TGAAGTGCACTCTGTTTAGGTTTT 59.053 37.500 21.95 0.00 0.00 2.43
3040 7918 0.913205 TTACTGATTTGGGGGCGCTA 59.087 50.000 7.64 0.00 0.00 4.26
3072 7950 9.661563 AATGTTTGATGCTATGAAAATTGTGAT 57.338 25.926 0.00 0.00 0.00 3.06
3232 8406 4.963276 AATGGGTTACGTTGATCATGTG 57.037 40.909 10.49 0.47 0.00 3.21
3304 8508 4.826556 TCTTTTTGGTTGGTGTTGAAAGG 58.173 39.130 0.00 0.00 0.00 3.11
3311 8515 4.527038 TGGTTGGTGTTGAAAGGTAAAACA 59.473 37.500 0.00 0.00 0.00 2.83
3379 9448 9.153721 ACATAAAACATAAAGTGCATTCATTGG 57.846 29.630 0.00 0.00 0.00 3.16
3521 9639 4.218200 TCATGAACAACATCGCTTCCAATT 59.782 37.500 0.00 0.00 37.07 2.32
3524 9643 2.795329 ACAACATCGCTTCCAATTCCT 58.205 42.857 0.00 0.00 0.00 3.36
3586 9787 4.123506 TCATGTACGTCAGAAACTTTGCA 58.876 39.130 0.00 0.00 0.00 4.08
3589 9790 4.123506 TGTACGTCAGAAACTTTGCATGA 58.876 39.130 0.00 0.00 0.00 3.07
3590 9791 4.572795 TGTACGTCAGAAACTTTGCATGAA 59.427 37.500 0.00 0.00 0.00 2.57
3591 9792 4.630894 ACGTCAGAAACTTTGCATGAAA 57.369 36.364 0.00 0.00 0.00 2.69
3592 9793 4.992688 ACGTCAGAAACTTTGCATGAAAA 58.007 34.783 0.00 0.00 0.00 2.29
3593 9794 5.406649 ACGTCAGAAACTTTGCATGAAAAA 58.593 33.333 0.00 0.00 0.00 1.94
3616 9817 1.957668 GGTAACTGTCGTGGGTTTGT 58.042 50.000 0.00 0.00 0.00 2.83
3617 9818 1.869132 GGTAACTGTCGTGGGTTTGTC 59.131 52.381 0.00 0.00 0.00 3.18
3618 9819 2.553086 GTAACTGTCGTGGGTTTGTCA 58.447 47.619 0.00 0.00 0.00 3.58
3619 9820 1.375551 AACTGTCGTGGGTTTGTCAC 58.624 50.000 0.00 0.00 0.00 3.67
3624 9825 3.427670 GTGGGTTTGTCACGGTGG 58.572 61.111 8.50 0.00 0.00 4.61
3625 9826 2.190841 GTGGGTTTGTCACGGTGGG 61.191 63.158 8.50 0.00 0.00 4.61
3626 9827 2.193786 GGGTTTGTCACGGTGGGT 59.806 61.111 8.50 0.00 0.00 4.51
3627 9828 1.454295 GGGTTTGTCACGGTGGGTT 60.454 57.895 8.50 0.00 0.00 4.11
3628 9829 1.038681 GGGTTTGTCACGGTGGGTTT 61.039 55.000 8.50 0.00 0.00 3.27
3629 9830 0.101579 GGTTTGTCACGGTGGGTTTG 59.898 55.000 8.50 0.00 0.00 2.93
3630 9831 0.812549 GTTTGTCACGGTGGGTTTGT 59.187 50.000 8.50 0.00 0.00 2.83
3631 9832 1.096416 TTTGTCACGGTGGGTTTGTC 58.904 50.000 8.50 0.00 0.00 3.18
3632 9833 0.035343 TTGTCACGGTGGGTTTGTCA 60.035 50.000 8.50 0.00 0.00 3.58
3633 9834 0.745128 TGTCACGGTGGGTTTGTCAC 60.745 55.000 8.50 0.00 34.61 3.67
3634 9835 1.521906 TCACGGTGGGTTTGTCACG 60.522 57.895 8.50 0.00 36.09 4.35
3635 9836 2.203098 ACGGTGGGTTTGTCACGG 60.203 61.111 0.00 0.00 40.03 4.94
3636 9837 3.656045 CGGTGGGTTTGTCACGGC 61.656 66.667 0.00 0.00 36.09 5.68
3637 9838 2.517402 GGTGGGTTTGTCACGGCA 60.517 61.111 0.00 0.00 36.09 5.69
3638 9839 2.122167 GGTGGGTTTGTCACGGCAA 61.122 57.895 0.00 0.00 36.09 4.52
3639 9840 1.668101 GGTGGGTTTGTCACGGCAAA 61.668 55.000 0.00 0.00 36.09 3.68
3640 9841 0.387565 GTGGGTTTGTCACGGCAAAT 59.612 50.000 0.00 0.00 40.01 2.32
3641 9842 0.387202 TGGGTTTGTCACGGCAAATG 59.613 50.000 0.00 0.00 40.01 2.32
3642 9843 0.387565 GGGTTTGTCACGGCAAATGT 59.612 50.000 0.00 0.00 40.01 2.71
3643 9844 1.601914 GGGTTTGTCACGGCAAATGTC 60.602 52.381 0.00 0.00 40.01 3.06
3644 9845 1.601914 GGTTTGTCACGGCAAATGTCC 60.602 52.381 0.00 0.00 40.01 4.02
3645 9846 1.336755 GTTTGTCACGGCAAATGTCCT 59.663 47.619 0.00 0.00 40.01 3.85
3646 9847 2.550606 GTTTGTCACGGCAAATGTCCTA 59.449 45.455 0.00 0.00 40.01 2.94
3647 9848 2.093306 TGTCACGGCAAATGTCCTAG 57.907 50.000 0.00 0.00 0.00 3.02
3648 9849 0.727398 GTCACGGCAAATGTCCTAGC 59.273 55.000 0.00 0.00 0.00 3.42
3649 9850 0.323302 TCACGGCAAATGTCCTAGCA 59.677 50.000 0.00 0.00 0.00 3.49
3650 9851 1.164411 CACGGCAAATGTCCTAGCAA 58.836 50.000 0.00 0.00 0.00 3.91
3651 9852 1.539388 CACGGCAAATGTCCTAGCAAA 59.461 47.619 0.00 0.00 0.00 3.68
3652 9853 2.030363 CACGGCAAATGTCCTAGCAAAA 60.030 45.455 0.00 0.00 0.00 2.44
3653 9854 2.228822 ACGGCAAATGTCCTAGCAAAAG 59.771 45.455 0.00 0.00 0.00 2.27
3654 9855 2.415893 CGGCAAATGTCCTAGCAAAAGG 60.416 50.000 0.00 0.00 38.06 3.11
3655 9856 2.825532 GGCAAATGTCCTAGCAAAAGGA 59.174 45.455 0.00 0.00 43.58 3.36
3663 9864 4.451629 TCCTAGCAAAAGGACTTAGTCG 57.548 45.455 6.27 0.00 40.86 4.18
3664 9865 3.830755 TCCTAGCAAAAGGACTTAGTCGT 59.169 43.478 6.27 3.84 40.86 4.34
3665 9866 3.927142 CCTAGCAAAAGGACTTAGTCGTG 59.073 47.826 8.39 4.33 39.15 4.35
3666 9867 2.767505 AGCAAAAGGACTTAGTCGTGG 58.232 47.619 8.39 3.34 32.65 4.94
3667 9868 2.367567 AGCAAAAGGACTTAGTCGTGGA 59.632 45.455 8.39 0.00 32.65 4.02
3668 9869 2.737252 GCAAAAGGACTTAGTCGTGGAG 59.263 50.000 8.39 3.04 32.65 3.86
3669 9870 2.737252 CAAAAGGACTTAGTCGTGGAGC 59.263 50.000 8.39 0.00 32.65 4.70
3670 9871 0.896226 AAGGACTTAGTCGTGGAGCC 59.104 55.000 8.39 0.00 32.65 4.70
3671 9872 0.251653 AGGACTTAGTCGTGGAGCCA 60.252 55.000 6.78 0.00 32.65 4.75
3672 9873 0.824759 GGACTTAGTCGTGGAGCCAT 59.175 55.000 6.27 0.00 32.65 4.40
3673 9874 1.202428 GGACTTAGTCGTGGAGCCATC 60.202 57.143 6.27 0.00 32.65 3.51
3674 9875 1.476891 GACTTAGTCGTGGAGCCATCA 59.523 52.381 0.00 0.00 0.00 3.07
3675 9876 1.204941 ACTTAGTCGTGGAGCCATCAC 59.795 52.381 0.00 0.00 0.00 3.06
3676 9877 1.204704 CTTAGTCGTGGAGCCATCACA 59.795 52.381 0.00 0.00 35.03 3.58
3677 9878 1.262417 TAGTCGTGGAGCCATCACAA 58.738 50.000 0.00 0.00 35.03 3.33
3678 9879 0.320771 AGTCGTGGAGCCATCACAAC 60.321 55.000 0.00 0.00 35.03 3.32
3679 9880 1.374125 TCGTGGAGCCATCACAACG 60.374 57.895 0.00 0.00 35.03 4.10
3680 9881 2.390599 CGTGGAGCCATCACAACGG 61.391 63.158 0.00 0.00 35.03 4.44
3681 9882 2.040544 GTGGAGCCATCACAACGGG 61.041 63.158 0.00 0.00 35.39 5.28
3682 9883 2.351276 GGAGCCATCACAACGGGT 59.649 61.111 0.00 0.00 35.18 5.28
3683 9884 1.303317 GGAGCCATCACAACGGGTT 60.303 57.895 0.00 0.00 31.81 4.11
3684 9885 0.035820 GGAGCCATCACAACGGGTTA 60.036 55.000 0.00 0.00 31.81 2.85
3685 9886 1.369625 GAGCCATCACAACGGGTTAG 58.630 55.000 0.00 0.00 31.81 2.34
3686 9887 0.676782 AGCCATCACAACGGGTTAGC 60.677 55.000 0.00 0.00 0.00 3.09
3687 9888 0.676782 GCCATCACAACGGGTTAGCT 60.677 55.000 0.00 0.00 0.00 3.32
3688 9889 1.821216 CCATCACAACGGGTTAGCTT 58.179 50.000 0.00 0.00 0.00 3.74
3689 9890 2.937873 GCCATCACAACGGGTTAGCTTA 60.938 50.000 0.00 0.00 0.00 3.09
3690 9891 3.340034 CCATCACAACGGGTTAGCTTAA 58.660 45.455 0.00 0.00 0.00 1.85
3691 9892 3.754323 CCATCACAACGGGTTAGCTTAAA 59.246 43.478 0.00 0.00 0.00 1.52
3692 9893 4.142687 CCATCACAACGGGTTAGCTTAAAG 60.143 45.833 0.00 0.00 0.00 1.85
3693 9894 3.404899 TCACAACGGGTTAGCTTAAAGG 58.595 45.455 0.00 0.00 0.00 3.11
3694 9895 2.486592 CACAACGGGTTAGCTTAAAGGG 59.513 50.000 0.00 0.00 0.00 3.95
3695 9896 2.089201 CAACGGGTTAGCTTAAAGGGG 58.911 52.381 0.00 0.00 0.00 4.79
3696 9897 1.365293 ACGGGTTAGCTTAAAGGGGT 58.635 50.000 0.00 0.00 0.00 4.95
3697 9898 1.706866 ACGGGTTAGCTTAAAGGGGTT 59.293 47.619 0.00 0.00 0.00 4.11
3698 9899 2.912295 ACGGGTTAGCTTAAAGGGGTTA 59.088 45.455 0.00 0.00 0.00 2.85
3699 9900 3.330405 ACGGGTTAGCTTAAAGGGGTTAA 59.670 43.478 0.00 0.00 0.00 2.01
3700 9901 4.202556 ACGGGTTAGCTTAAAGGGGTTAAA 60.203 41.667 0.00 0.00 31.22 1.52
3701 9902 4.156556 CGGGTTAGCTTAAAGGGGTTAAAC 59.843 45.833 0.00 0.00 31.22 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.390599 CCGTCCGTTGCATGGTGAG 61.391 63.158 5.49 0.00 0.00 3.51
1 2 2.358125 CCGTCCGTTGCATGGTGA 60.358 61.111 5.49 0.00 0.00 4.02
2 3 3.430862 CCCGTCCGTTGCATGGTG 61.431 66.667 5.49 0.76 0.00 4.17
5 6 4.101790 GTGCCCGTCCGTTGCATG 62.102 66.667 4.78 0.00 37.34 4.06
19 20 4.492160 TGATCGTCGCCTCGGTGC 62.492 66.667 0.00 0.00 0.00 5.01
20 21 2.278206 CTGATCGTCGCCTCGGTG 60.278 66.667 0.00 0.00 0.00 4.94
21 22 2.437895 TCTGATCGTCGCCTCGGT 60.438 61.111 0.00 0.00 0.00 4.69
22 23 2.329690 CTCTGATCGTCGCCTCGG 59.670 66.667 0.00 0.00 0.00 4.63
23 24 2.329690 CCTCTGATCGTCGCCTCG 59.670 66.667 0.00 0.00 0.00 4.63
24 25 1.668101 AACCCTCTGATCGTCGCCTC 61.668 60.000 0.00 0.00 0.00 4.70
25 26 1.682684 AACCCTCTGATCGTCGCCT 60.683 57.895 0.00 0.00 0.00 5.52
26 27 1.519455 CAACCCTCTGATCGTCGCC 60.519 63.158 0.00 0.00 0.00 5.54
27 28 1.519455 CCAACCCTCTGATCGTCGC 60.519 63.158 0.00 0.00 0.00 5.19
28 29 1.141881 CCCAACCCTCTGATCGTCG 59.858 63.158 0.00 0.00 0.00 5.12
29 30 1.522569 CCCCAACCCTCTGATCGTC 59.477 63.158 0.00 0.00 0.00 4.20
30 31 2.670148 GCCCCAACCCTCTGATCGT 61.670 63.158 0.00 0.00 0.00 3.73
31 32 2.190578 GCCCCAACCCTCTGATCG 59.809 66.667 0.00 0.00 0.00 3.69
32 33 1.225704 CTGCCCCAACCCTCTGATC 59.774 63.158 0.00 0.00 0.00 2.92
33 34 2.311854 CCTGCCCCAACCCTCTGAT 61.312 63.158 0.00 0.00 0.00 2.90
34 35 2.935481 CCTGCCCCAACCCTCTGA 60.935 66.667 0.00 0.00 0.00 3.27
35 36 4.748144 GCCTGCCCCAACCCTCTG 62.748 72.222 0.00 0.00 0.00 3.35
47 48 4.881440 TCATCCATGCCGGCCTGC 62.881 66.667 26.77 12.95 33.14 4.85
48 49 1.529948 AATCATCCATGCCGGCCTG 60.530 57.895 26.77 24.86 33.14 4.85
49 50 1.529948 CAATCATCCATGCCGGCCT 60.530 57.895 26.77 12.40 33.14 5.19
50 51 2.567497 CCAATCATCCATGCCGGCC 61.567 63.158 26.77 6.44 33.14 6.13
51 52 1.829533 ACCAATCATCCATGCCGGC 60.830 57.895 22.73 22.73 33.14 6.13
52 53 0.752743 ACACCAATCATCCATGCCGG 60.753 55.000 0.00 0.00 0.00 6.13
53 54 0.382873 CACACCAATCATCCATGCCG 59.617 55.000 0.00 0.00 0.00 5.69
54 55 1.406539 GTCACACCAATCATCCATGCC 59.593 52.381 0.00 0.00 0.00 4.40
55 56 1.064505 CGTCACACCAATCATCCATGC 59.935 52.381 0.00 0.00 0.00 4.06
56 57 2.352651 GTCGTCACACCAATCATCCATG 59.647 50.000 0.00 0.00 0.00 3.66
57 58 2.632377 GTCGTCACACCAATCATCCAT 58.368 47.619 0.00 0.00 0.00 3.41
58 59 1.671556 CGTCGTCACACCAATCATCCA 60.672 52.381 0.00 0.00 0.00 3.41
59 60 0.999406 CGTCGTCACACCAATCATCC 59.001 55.000 0.00 0.00 0.00 3.51
60 61 0.999406 CCGTCGTCACACCAATCATC 59.001 55.000 0.00 0.00 0.00 2.92
61 62 1.019278 GCCGTCGTCACACCAATCAT 61.019 55.000 0.00 0.00 0.00 2.45
62 63 1.666553 GCCGTCGTCACACCAATCA 60.667 57.895 0.00 0.00 0.00 2.57
63 64 0.108992 TAGCCGTCGTCACACCAATC 60.109 55.000 0.00 0.00 0.00 2.67
64 65 0.108804 CTAGCCGTCGTCACACCAAT 60.109 55.000 0.00 0.00 0.00 3.16
65 66 1.287815 CTAGCCGTCGTCACACCAA 59.712 57.895 0.00 0.00 0.00 3.67
66 67 2.632544 CCTAGCCGTCGTCACACCA 61.633 63.158 0.00 0.00 0.00 4.17
67 68 2.181021 CCTAGCCGTCGTCACACC 59.819 66.667 0.00 0.00 0.00 4.16
68 69 2.151049 AACCCTAGCCGTCGTCACAC 62.151 60.000 0.00 0.00 0.00 3.82
69 70 1.466025 AAACCCTAGCCGTCGTCACA 61.466 55.000 0.00 0.00 0.00 3.58
70 71 0.735287 GAAACCCTAGCCGTCGTCAC 60.735 60.000 0.00 0.00 0.00 3.67
71 72 0.896940 AGAAACCCTAGCCGTCGTCA 60.897 55.000 0.00 0.00 0.00 4.35
72 73 0.245813 AAGAAACCCTAGCCGTCGTC 59.754 55.000 0.00 0.00 0.00 4.20
73 74 0.037605 CAAGAAACCCTAGCCGTCGT 60.038 55.000 0.00 0.00 0.00 4.34
74 75 1.359459 GCAAGAAACCCTAGCCGTCG 61.359 60.000 0.00 0.00 0.00 5.12
75 76 0.036294 AGCAAGAAACCCTAGCCGTC 60.036 55.000 0.00 0.00 0.00 4.79
76 77 1.066358 GTAGCAAGAAACCCTAGCCGT 60.066 52.381 0.00 0.00 0.00 5.68
77 78 1.653151 GTAGCAAGAAACCCTAGCCG 58.347 55.000 0.00 0.00 0.00 5.52
78 79 1.653151 CGTAGCAAGAAACCCTAGCC 58.347 55.000 0.00 0.00 0.00 3.93
93 94 1.749638 AGGAGGTGAGTCGGCGTAG 60.750 63.158 6.85 0.00 0.00 3.51
94 95 2.044555 CAGGAGGTGAGTCGGCGTA 61.045 63.158 6.85 0.00 0.00 4.42
95 96 3.374402 CAGGAGGTGAGTCGGCGT 61.374 66.667 6.85 0.00 0.00 5.68
96 97 2.418910 ATCAGGAGGTGAGTCGGCG 61.419 63.158 0.00 0.00 39.07 6.46
97 98 1.142748 CATCAGGAGGTGAGTCGGC 59.857 63.158 0.00 0.00 39.07 5.54
98 99 0.972983 ACCATCAGGAGGTGAGTCGG 60.973 60.000 0.00 0.00 39.07 4.79
99 100 0.898320 AACCATCAGGAGGTGAGTCG 59.102 55.000 0.00 0.00 39.07 4.18
100 101 3.425162 AAAACCATCAGGAGGTGAGTC 57.575 47.619 0.00 0.00 39.07 3.36
101 102 3.884037 AAAAACCATCAGGAGGTGAGT 57.116 42.857 0.00 0.00 39.07 3.41
121 122 3.759618 AGTCACAAAGAACCCGTCAAAAA 59.240 39.130 0.00 0.00 0.00 1.94
122 123 3.127895 CAGTCACAAAGAACCCGTCAAAA 59.872 43.478 0.00 0.00 0.00 2.44
123 124 2.680841 CAGTCACAAAGAACCCGTCAAA 59.319 45.455 0.00 0.00 0.00 2.69
124 125 2.285083 CAGTCACAAAGAACCCGTCAA 58.715 47.619 0.00 0.00 0.00 3.18
125 126 1.948104 CAGTCACAAAGAACCCGTCA 58.052 50.000 0.00 0.00 0.00 4.35
126 127 0.586802 GCAGTCACAAAGAACCCGTC 59.413 55.000 0.00 0.00 0.00 4.79
127 128 0.107410 TGCAGTCACAAAGAACCCGT 60.107 50.000 0.00 0.00 0.00 5.28
128 129 0.588252 CTGCAGTCACAAAGAACCCG 59.412 55.000 5.25 0.00 0.00 5.28
129 130 0.954452 CCTGCAGTCACAAAGAACCC 59.046 55.000 13.81 0.00 0.00 4.11
130 131 1.680338 ACCTGCAGTCACAAAGAACC 58.320 50.000 13.81 0.00 0.00 3.62
131 132 3.782889 AAACCTGCAGTCACAAAGAAC 57.217 42.857 13.81 0.00 0.00 3.01
132 133 4.799564 AAAAACCTGCAGTCACAAAGAA 57.200 36.364 13.81 0.00 0.00 2.52
151 152 4.635833 AAGAAAACCGAACCGCTAAAAA 57.364 36.364 0.00 0.00 0.00 1.94
152 153 4.635833 AAAGAAAACCGAACCGCTAAAA 57.364 36.364 0.00 0.00 0.00 1.52
153 154 4.635833 AAAAGAAAACCGAACCGCTAAA 57.364 36.364 0.00 0.00 0.00 1.85
154 155 4.635833 AAAAAGAAAACCGAACCGCTAA 57.364 36.364 0.00 0.00 0.00 3.09
177 178 7.166804 CGAACCGCTCAAAATCTAAAAGAAAAA 59.833 33.333 0.00 0.00 0.00 1.94
178 179 6.635239 CGAACCGCTCAAAATCTAAAAGAAAA 59.365 34.615 0.00 0.00 0.00 2.29
179 180 6.140110 CGAACCGCTCAAAATCTAAAAGAAA 58.860 36.000 0.00 0.00 0.00 2.52
180 181 5.237779 ACGAACCGCTCAAAATCTAAAAGAA 59.762 36.000 0.00 0.00 0.00 2.52
181 182 4.753107 ACGAACCGCTCAAAATCTAAAAGA 59.247 37.500 0.00 0.00 0.00 2.52
182 183 4.846137 CACGAACCGCTCAAAATCTAAAAG 59.154 41.667 0.00 0.00 0.00 2.27
183 184 4.319911 CCACGAACCGCTCAAAATCTAAAA 60.320 41.667 0.00 0.00 0.00 1.52
184 185 3.187637 CCACGAACCGCTCAAAATCTAAA 59.812 43.478 0.00 0.00 0.00 1.85
185 186 2.739913 CCACGAACCGCTCAAAATCTAA 59.260 45.455 0.00 0.00 0.00 2.10
186 187 2.289195 ACCACGAACCGCTCAAAATCTA 60.289 45.455 0.00 0.00 0.00 1.98
187 188 1.156736 CCACGAACCGCTCAAAATCT 58.843 50.000 0.00 0.00 0.00 2.40
188 189 0.872388 ACCACGAACCGCTCAAAATC 59.128 50.000 0.00 0.00 0.00 2.17
189 190 0.591170 CACCACGAACCGCTCAAAAT 59.409 50.000 0.00 0.00 0.00 1.82
190 191 1.440938 CCACCACGAACCGCTCAAAA 61.441 55.000 0.00 0.00 0.00 2.44
191 192 1.890041 CCACCACGAACCGCTCAAA 60.890 57.895 0.00 0.00 0.00 2.69
192 193 1.746322 TACCACCACGAACCGCTCAA 61.746 55.000 0.00 0.00 0.00 3.02
193 194 2.149803 CTACCACCACGAACCGCTCA 62.150 60.000 0.00 0.00 0.00 4.26
194 195 1.445582 CTACCACCACGAACCGCTC 60.446 63.158 0.00 0.00 0.00 5.03
195 196 2.654877 CTACCACCACGAACCGCT 59.345 61.111 0.00 0.00 0.00 5.52
196 197 1.876497 TACCTACCACCACGAACCGC 61.876 60.000 0.00 0.00 0.00 5.68
197 198 0.819582 ATACCTACCACCACGAACCG 59.180 55.000 0.00 0.00 0.00 4.44
198 199 3.026694 AGTATACCTACCACCACGAACC 58.973 50.000 0.00 0.00 0.00 3.62
199 200 4.276926 CCTAGTATACCTACCACCACGAAC 59.723 50.000 0.00 0.00 0.00 3.95
200 201 4.079787 ACCTAGTATACCTACCACCACGAA 60.080 45.833 0.00 0.00 0.00 3.85
201 202 3.459598 ACCTAGTATACCTACCACCACGA 59.540 47.826 0.00 0.00 0.00 4.35
202 203 3.825328 ACCTAGTATACCTACCACCACG 58.175 50.000 0.00 0.00 0.00 4.94
203 204 5.946486 ACTACCTAGTATACCTACCACCAC 58.054 45.833 0.00 0.00 34.13 4.16
204 205 6.273260 CCTACTACCTAGTATACCTACCACCA 59.727 46.154 0.00 0.00 38.06 4.17
205 206 6.273495 ACCTACTACCTAGTATACCTACCACC 59.727 46.154 0.00 0.00 38.06 4.61
206 207 7.323052 ACCTACTACCTAGTATACCTACCAC 57.677 44.000 0.00 0.00 38.06 4.16
207 208 7.350921 ACAACCTACTACCTAGTATACCTACCA 59.649 40.741 0.00 0.00 38.06 3.25
208 209 7.663493 CACAACCTACTACCTAGTATACCTACC 59.337 44.444 0.00 0.00 38.06 3.18
209 210 8.214364 ACACAACCTACTACCTAGTATACCTAC 58.786 40.741 0.00 0.00 38.06 3.18
210 211 8.337118 ACACAACCTACTACCTAGTATACCTA 57.663 38.462 0.00 0.00 38.06 3.08
211 212 7.218314 ACACAACCTACTACCTAGTATACCT 57.782 40.000 0.00 0.00 38.06 3.08
212 213 8.432805 TCTACACAACCTACTACCTAGTATACC 58.567 40.741 0.00 0.00 38.06 2.73
213 214 9.487790 CTCTACACAACCTACTACCTAGTATAC 57.512 40.741 0.00 0.00 38.06 1.47
214 215 8.153550 GCTCTACACAACCTACTACCTAGTATA 58.846 40.741 0.00 0.00 38.06 1.47
215 216 6.997476 GCTCTACACAACCTACTACCTAGTAT 59.003 42.308 0.00 0.00 38.06 2.12
216 217 6.352516 GCTCTACACAACCTACTACCTAGTA 58.647 44.000 0.00 0.00 37.73 1.82
217 218 5.192176 GCTCTACACAACCTACTACCTAGT 58.808 45.833 0.00 0.00 40.24 2.57
218 219 4.579753 GGCTCTACACAACCTACTACCTAG 59.420 50.000 0.00 0.00 0.00 3.02
219 220 4.530875 GGCTCTACACAACCTACTACCTA 58.469 47.826 0.00 0.00 0.00 3.08
220 221 3.363627 GGCTCTACACAACCTACTACCT 58.636 50.000 0.00 0.00 0.00 3.08
221 222 2.429971 GGGCTCTACACAACCTACTACC 59.570 54.545 0.00 0.00 0.00 3.18
222 223 2.098770 CGGGCTCTACACAACCTACTAC 59.901 54.545 0.00 0.00 0.00 2.73
223 224 2.372264 CGGGCTCTACACAACCTACTA 58.628 52.381 0.00 0.00 0.00 1.82
224 225 1.183549 CGGGCTCTACACAACCTACT 58.816 55.000 0.00 0.00 0.00 2.57
225 226 0.459759 GCGGGCTCTACACAACCTAC 60.460 60.000 0.00 0.00 0.00 3.18
226 227 0.613853 AGCGGGCTCTACACAACCTA 60.614 55.000 0.00 0.00 0.00 3.08
227 228 1.913762 AGCGGGCTCTACACAACCT 60.914 57.895 0.00 0.00 0.00 3.50
228 229 1.741770 CAGCGGGCTCTACACAACC 60.742 63.158 0.00 0.00 0.00 3.77
229 230 1.741770 CCAGCGGGCTCTACACAAC 60.742 63.158 0.00 0.00 0.00 3.32
230 231 2.662596 CCAGCGGGCTCTACACAA 59.337 61.111 0.00 0.00 0.00 3.33
231 232 3.390521 CCCAGCGGGCTCTACACA 61.391 66.667 0.00 0.00 35.35 3.72
248 249 4.902645 GGCTGGGTATGGGCTGGC 62.903 72.222 0.00 0.00 0.00 4.85
270 271 0.615331 ATGTGCGGTGTGAGAGGAAT 59.385 50.000 0.00 0.00 0.00 3.01
274 275 1.807165 CGGATGTGCGGTGTGAGAG 60.807 63.158 0.00 0.00 0.00 3.20
277 278 2.048597 GACGGATGTGCGGTGTGA 60.049 61.111 0.00 0.00 0.00 3.58
278 279 2.356913 TGACGGATGTGCGGTGTG 60.357 61.111 0.00 0.00 0.00 3.82
279 280 2.048222 CTGACGGATGTGCGGTGT 60.048 61.111 0.00 0.00 0.00 4.16
280 281 2.048222 ACTGACGGATGTGCGGTG 60.048 61.111 0.00 0.00 0.00 4.94
281 282 2.261671 GACTGACGGATGTGCGGT 59.738 61.111 0.00 0.00 0.00 5.68
282 283 2.509336 GGACTGACGGATGTGCGG 60.509 66.667 0.00 0.00 0.00 5.69
284 285 1.805945 GACGGACTGACGGATGTGC 60.806 63.158 0.00 0.00 38.39 4.57
289 290 3.429141 GAGCGACGGACTGACGGA 61.429 66.667 8.19 0.00 38.39 4.69
291 292 3.733960 TGGAGCGACGGACTGACG 61.734 66.667 1.59 1.59 38.79 4.35
292 293 2.126424 GTGGAGCGACGGACTGAC 60.126 66.667 0.00 0.00 0.00 3.51
293 294 3.371063 GGTGGAGCGACGGACTGA 61.371 66.667 0.00 0.00 0.00 3.41
294 295 4.436998 GGGTGGAGCGACGGACTG 62.437 72.222 0.00 0.00 0.00 3.51
295 296 4.680537 AGGGTGGAGCGACGGACT 62.681 66.667 0.00 0.00 0.00 3.85
297 298 3.379445 GAAGGGTGGAGCGACGGA 61.379 66.667 0.00 0.00 0.00 4.69
326 327 2.285180 CAGGGGAGGAGGAGGAGG 59.715 72.222 0.00 0.00 0.00 4.30
330 331 1.457455 GAGAGCAGGGGAGGAGGAG 60.457 68.421 0.00 0.00 0.00 3.69
331 332 2.693017 GAGAGCAGGGGAGGAGGA 59.307 66.667 0.00 0.00 0.00 3.71
333 334 1.457455 GAGGAGAGCAGGGGAGGAG 60.457 68.421 0.00 0.00 0.00 3.69
336 337 2.837291 CCGAGGAGAGCAGGGGAG 60.837 72.222 0.00 0.00 0.00 4.30
337 338 4.465446 CCCGAGGAGAGCAGGGGA 62.465 72.222 0.00 0.00 40.51 4.81
387 398 4.847444 GAAGGCCGCTGCTCCCTC 62.847 72.222 8.16 0.57 37.74 4.30
404 415 1.309102 AGGGGAAGAAGGGATGGGG 60.309 63.158 0.00 0.00 0.00 4.96
448 482 3.450115 CCTCGGGGTCGTGGTCTC 61.450 72.222 0.00 0.00 42.94 3.36
473 507 2.992689 TGCCGGAACTAGTCGCCA 60.993 61.111 5.05 0.26 0.00 5.69
487 521 2.750237 CCAGGTTTACCGGCTGCC 60.750 66.667 9.11 9.11 42.08 4.85
489 523 2.045340 CCCCAGGTTTACCGGCTG 60.045 66.667 0.00 0.00 42.08 4.85
493 527 2.266689 CCGACCCCAGGTTTACCG 59.733 66.667 0.00 0.00 42.08 4.02
520 554 2.159043 CGGTACCTGAGATGCTTGTCAT 60.159 50.000 10.90 0.00 38.32 3.06
521 555 1.204704 CGGTACCTGAGATGCTTGTCA 59.795 52.381 10.90 0.00 0.00 3.58
522 556 1.927895 CGGTACCTGAGATGCTTGTC 58.072 55.000 10.90 0.00 0.00 3.18
523 557 0.108138 GCGGTACCTGAGATGCTTGT 60.108 55.000 10.90 0.00 0.00 3.16
543 577 3.327757 GGATGGGATGGAATGTAGCAGTA 59.672 47.826 0.00 0.00 0.00 2.74
544 578 2.107204 GGATGGGATGGAATGTAGCAGT 59.893 50.000 0.00 0.00 0.00 4.40
545 579 2.553904 GGGATGGGATGGAATGTAGCAG 60.554 54.545 0.00 0.00 0.00 4.24
546 580 1.425066 GGGATGGGATGGAATGTAGCA 59.575 52.381 0.00 0.00 0.00 3.49
568 602 8.504811 AAAAAGGGAGAAATTTATTCTTCCCA 57.495 30.769 18.75 0.00 43.81 4.37
601 635 5.750650 CCTAGTAAGTAGTAGCGAAGAAGC 58.249 45.833 0.00 0.00 37.41 3.86
667 701 5.177511 CGTTGCTTTCTTGATCAACTCAGTA 59.822 40.000 3.38 0.00 37.31 2.74
668 702 4.024556 CGTTGCTTTCTTGATCAACTCAGT 60.025 41.667 3.38 0.00 37.31 3.41
673 707 2.998772 TGCGTTGCTTTCTTGATCAAC 58.001 42.857 3.38 0.00 36.42 3.18
693 727 4.575236 CAGTGCATCTACATGAGCTGAATT 59.425 41.667 0.00 0.00 36.32 2.17
710 773 3.030291 AGGGTGAAATTTGTTCAGTGCA 58.970 40.909 0.00 0.00 0.00 4.57
737 800 4.437390 GCGCATCTACATTGTGCTAAGTTT 60.437 41.667 0.30 0.00 44.97 2.66
738 801 3.063997 GCGCATCTACATTGTGCTAAGTT 59.936 43.478 0.30 0.00 44.97 2.66
740 803 2.032549 GGCGCATCTACATTGTGCTAAG 60.033 50.000 10.83 0.00 46.96 2.18
741 804 1.939934 GGCGCATCTACATTGTGCTAA 59.060 47.619 10.83 0.00 46.96 3.09
742 805 1.581934 GGCGCATCTACATTGTGCTA 58.418 50.000 10.83 0.00 46.96 3.49
743 806 1.097547 GGGCGCATCTACATTGTGCT 61.098 55.000 10.83 0.00 46.96 4.40
745 808 1.643292 CGGGCGCATCTACATTGTG 59.357 57.895 10.83 0.00 0.00 3.33
746 809 2.180204 GCGGGCGCATCTACATTGT 61.180 57.895 10.83 0.00 41.49 2.71
747 810 2.633657 GCGGGCGCATCTACATTG 59.366 61.111 10.83 0.00 41.49 2.82
748 811 2.591715 GGCGGGCGCATCTACATT 60.592 61.111 10.83 0.00 44.11 2.71
749 812 4.626081 GGGCGGGCGCATCTACAT 62.626 66.667 10.83 0.00 44.11 2.29
751 814 4.971125 GAGGGCGGGCGCATCTAC 62.971 72.222 10.83 0.00 44.11 2.59
757 820 4.547367 AATACAGAGGGCGGGCGC 62.547 66.667 0.00 0.00 41.06 6.53
758 821 2.588877 CAATACAGAGGGCGGGCG 60.589 66.667 0.00 0.00 0.00 6.13
759 822 1.077716 AACAATACAGAGGGCGGGC 60.078 57.895 0.00 0.00 0.00 6.13
760 823 1.376609 GCAACAATACAGAGGGCGGG 61.377 60.000 0.00 0.00 0.00 6.13
761 824 0.392998 AGCAACAATACAGAGGGCGG 60.393 55.000 0.00 0.00 0.00 6.13
762 825 1.453155 AAGCAACAATACAGAGGGCG 58.547 50.000 0.00 0.00 0.00 6.13
763 826 3.367395 GGAAAAGCAACAATACAGAGGGC 60.367 47.826 0.00 0.00 0.00 5.19
764 827 3.826157 TGGAAAAGCAACAATACAGAGGG 59.174 43.478 0.00 0.00 0.00 4.30
765 828 5.649782 ATGGAAAAGCAACAATACAGAGG 57.350 39.130 0.00 0.00 0.00 3.69
766 829 5.346822 GCAATGGAAAAGCAACAATACAGAG 59.653 40.000 0.00 0.00 0.00 3.35
767 830 5.221402 TGCAATGGAAAAGCAACAATACAGA 60.221 36.000 0.00 0.00 34.97 3.41
768 831 4.989797 TGCAATGGAAAAGCAACAATACAG 59.010 37.500 0.00 0.00 34.97 2.74
769 832 4.953667 TGCAATGGAAAAGCAACAATACA 58.046 34.783 0.00 0.00 34.97 2.29
791 854 5.595952 AGCTTCATGAGTTTCTTCCAAACTT 59.404 36.000 0.00 0.00 40.27 2.66
793 856 5.444663 AGCTTCATGAGTTTCTTCCAAAC 57.555 39.130 0.00 0.00 0.00 2.93
796 859 6.469782 AAAAAGCTTCATGAGTTTCTTCCA 57.530 33.333 0.00 0.00 0.00 3.53
816 879 2.846193 ACTCGGCACAAGCTAGAAAAA 58.154 42.857 0.00 0.00 41.70 1.94
817 880 2.543777 ACTCGGCACAAGCTAGAAAA 57.456 45.000 0.00 0.00 41.70 2.29
818 881 3.671008 TTACTCGGCACAAGCTAGAAA 57.329 42.857 0.00 0.00 41.70 2.52
819 882 3.887621 ATTACTCGGCACAAGCTAGAA 57.112 42.857 0.00 0.00 41.70 2.10
820 883 4.736759 GCTTATTACTCGGCACAAGCTAGA 60.737 45.833 0.00 0.00 41.70 2.43
821 884 3.491267 GCTTATTACTCGGCACAAGCTAG 59.509 47.826 0.00 0.00 41.70 3.42
822 885 3.454375 GCTTATTACTCGGCACAAGCTA 58.546 45.455 0.00 0.00 41.70 3.32
823 886 2.280628 GCTTATTACTCGGCACAAGCT 58.719 47.619 0.00 0.00 41.70 3.74
824 887 1.330829 GGCTTATTACTCGGCACAAGC 59.669 52.381 0.00 0.00 41.10 4.01
825 888 1.593006 CGGCTTATTACTCGGCACAAG 59.407 52.381 0.00 0.00 0.00 3.16
826 889 1.066716 ACGGCTTATTACTCGGCACAA 60.067 47.619 0.00 0.00 0.00 3.33
827 890 0.533491 ACGGCTTATTACTCGGCACA 59.467 50.000 0.00 0.00 0.00 4.57
828 891 1.326548 CAACGGCTTATTACTCGGCAC 59.673 52.381 0.00 0.00 0.00 5.01
829 892 1.066716 ACAACGGCTTATTACTCGGCA 60.067 47.619 0.00 0.00 0.00 5.69
830 893 1.591619 GACAACGGCTTATTACTCGGC 59.408 52.381 0.00 0.00 0.00 5.54
831 894 2.601763 GTGACAACGGCTTATTACTCGG 59.398 50.000 0.00 0.00 0.00 4.63
832 895 3.508762 AGTGACAACGGCTTATTACTCG 58.491 45.455 0.00 0.00 0.00 4.18
833 896 4.927425 TGAAGTGACAACGGCTTATTACTC 59.073 41.667 0.00 0.00 0.00 2.59
834 897 4.890088 TGAAGTGACAACGGCTTATTACT 58.110 39.130 0.00 0.00 0.00 2.24
835 898 4.927425 TCTGAAGTGACAACGGCTTATTAC 59.073 41.667 0.00 0.00 0.00 1.89
836 899 5.047590 TCTCTGAAGTGACAACGGCTTATTA 60.048 40.000 0.00 0.00 0.00 0.98
837 900 3.997021 CTCTGAAGTGACAACGGCTTATT 59.003 43.478 0.00 0.00 0.00 1.40
838 901 3.258372 TCTCTGAAGTGACAACGGCTTAT 59.742 43.478 0.00 0.00 0.00 1.73
839 902 2.626266 TCTCTGAAGTGACAACGGCTTA 59.374 45.455 0.00 0.00 0.00 3.09
840 903 1.412710 TCTCTGAAGTGACAACGGCTT 59.587 47.619 0.00 0.00 0.00 4.35
841 904 1.040646 TCTCTGAAGTGACAACGGCT 58.959 50.000 0.00 0.00 0.00 5.52
845 908 9.296400 GATAATAAGAGTCTCTGAAGTGACAAC 57.704 37.037 2.28 7.92 40.05 3.32
849 912 8.815565 ACTGATAATAAGAGTCTCTGAAGTGA 57.184 34.615 2.28 0.00 0.00 3.41
882 945 3.246094 ACCAATCCATTCCCCTGTTTCAT 60.246 43.478 0.00 0.00 0.00 2.57
883 946 2.111613 ACCAATCCATTCCCCTGTTTCA 59.888 45.455 0.00 0.00 0.00 2.69
884 947 2.497273 CACCAATCCATTCCCCTGTTTC 59.503 50.000 0.00 0.00 0.00 2.78
885 948 2.111613 TCACCAATCCATTCCCCTGTTT 59.888 45.455 0.00 0.00 0.00 2.83
886 949 1.715931 TCACCAATCCATTCCCCTGTT 59.284 47.619 0.00 0.00 0.00 3.16
887 950 1.005924 GTCACCAATCCATTCCCCTGT 59.994 52.381 0.00 0.00 0.00 4.00
888 951 1.767759 GTCACCAATCCATTCCCCTG 58.232 55.000 0.00 0.00 0.00 4.45
889 952 0.255890 CGTCACCAATCCATTCCCCT 59.744 55.000 0.00 0.00 0.00 4.79
890 953 1.384222 GCGTCACCAATCCATTCCCC 61.384 60.000 0.00 0.00 0.00 4.81
891 954 0.394352 AGCGTCACCAATCCATTCCC 60.394 55.000 0.00 0.00 0.00 3.97
892 955 0.734889 CAGCGTCACCAATCCATTCC 59.265 55.000 0.00 0.00 0.00 3.01
893 956 1.453155 ACAGCGTCACCAATCCATTC 58.547 50.000 0.00 0.00 0.00 2.67
894 957 1.541147 CAACAGCGTCACCAATCCATT 59.459 47.619 0.00 0.00 0.00 3.16
895 958 1.167851 CAACAGCGTCACCAATCCAT 58.832 50.000 0.00 0.00 0.00 3.41
896 959 0.179032 ACAACAGCGTCACCAATCCA 60.179 50.000 0.00 0.00 0.00 3.41
897 960 0.951558 AACAACAGCGTCACCAATCC 59.048 50.000 0.00 0.00 0.00 3.01
898 961 2.032799 TCAAACAACAGCGTCACCAATC 59.967 45.455 0.00 0.00 0.00 2.67
899 962 2.020720 TCAAACAACAGCGTCACCAAT 58.979 42.857 0.00 0.00 0.00 3.16
900 963 1.454201 TCAAACAACAGCGTCACCAA 58.546 45.000 0.00 0.00 0.00 3.67
901 964 1.131504 GTTCAAACAACAGCGTCACCA 59.868 47.619 0.00 0.00 0.00 4.17
902 965 1.822581 GTTCAAACAACAGCGTCACC 58.177 50.000 0.00 0.00 0.00 4.02
903 966 1.452717 CGTTCAAACAACAGCGTCAC 58.547 50.000 0.00 0.00 0.00 3.67
904 967 0.375454 CCGTTCAAACAACAGCGTCA 59.625 50.000 0.00 0.00 0.00 4.35
905 968 0.375803 ACCGTTCAAACAACAGCGTC 59.624 50.000 0.00 0.00 0.00 5.19
906 969 1.595794 CTACCGTTCAAACAACAGCGT 59.404 47.619 0.00 0.00 0.00 5.07
907 970 1.070175 CCTACCGTTCAAACAACAGCG 60.070 52.381 0.00 0.00 0.00 5.18
908 971 1.334689 GCCTACCGTTCAAACAACAGC 60.335 52.381 0.00 0.00 0.00 4.40
909 972 1.070175 CGCCTACCGTTCAAACAACAG 60.070 52.381 0.00 0.00 0.00 3.16
910 973 0.938713 CGCCTACCGTTCAAACAACA 59.061 50.000 0.00 0.00 0.00 3.33
911 974 3.740384 CGCCTACCGTTCAAACAAC 57.260 52.632 0.00 0.00 0.00 3.32
923 986 0.737715 CAACAGAGCTCCACGCCTAC 60.738 60.000 10.93 0.00 40.39 3.18
951 1014 2.624838 CCGCCTTGCTTGATATTCCAAT 59.375 45.455 0.00 0.00 0.00 3.16
955 1018 3.467803 AGTACCGCCTTGCTTGATATTC 58.532 45.455 0.00 0.00 0.00 1.75
971 1037 5.981915 ACGAGAACTCAAAGTTACAAGTACC 59.018 40.000 0.00 0.00 38.80 3.34
972 1038 6.074463 CCACGAGAACTCAAAGTTACAAGTAC 60.074 42.308 0.00 0.00 38.80 2.73
977 1043 3.128349 GCCACGAGAACTCAAAGTTACA 58.872 45.455 0.00 0.00 38.80 2.41
980 1046 1.202486 TCGCCACGAGAACTCAAAGTT 60.202 47.619 0.00 0.00 41.95 2.66
984 1050 0.389817 CCATCGCCACGAGAACTCAA 60.390 55.000 0.00 0.00 39.91 3.02
991 1057 1.884464 CACCATCCATCGCCACGAG 60.884 63.158 0.00 0.00 39.91 4.18
993 1059 2.642996 TAGCACCATCCATCGCCACG 62.643 60.000 0.00 0.00 0.00 4.94
1010 1076 3.537580 ACTCGTCTCTTGCTAGAGGTAG 58.462 50.000 22.43 18.28 46.57 3.18
1045 1111 2.181445 TTGCAGCTGCTCTCCTCCTG 62.181 60.000 36.61 0.00 42.66 3.86
1049 1115 1.597989 CTCTTGCAGCTGCTCTCCT 59.402 57.895 36.61 0.00 42.66 3.69
1126 1198 1.906990 ACCTGGTATATCGGAGGTCG 58.093 55.000 0.00 0.00 33.27 4.79
1147 1219 7.132213 GTCATGTAAATATGTGCACATGTACC 58.868 38.462 36.72 22.35 45.39 3.34
1148 1220 7.639850 GTGTCATGTAAATATGTGCACATGTAC 59.360 37.037 36.72 30.85 45.39 2.90
1159 1593 9.619316 GCTCTCTACTAGTGTCATGTAAATATG 57.381 37.037 5.39 0.00 0.00 1.78
1167 1601 7.686438 ATATGAGCTCTCTACTAGTGTCATG 57.314 40.000 16.19 0.00 0.00 3.07
1168 1602 9.800572 TTTATATGAGCTCTCTACTAGTGTCAT 57.199 33.333 16.19 5.17 0.00 3.06
1226 1684 5.970289 TCATGGGAGGTCTGAGAGTATATT 58.030 41.667 0.00 0.00 0.00 1.28
1229 1687 3.206412 ACTCATGGGAGGTCTGAGAGTAT 59.794 47.826 0.00 0.00 45.81 2.12
1253 1711 5.690997 ACCTTTCTTAGCAAGTAAAGCAC 57.309 39.130 0.00 0.00 30.81 4.40
1334 1799 6.537301 GTCTCAAACCAAATATCGGTGTCATA 59.463 38.462 0.00 0.00 36.67 2.15
1352 1817 3.550820 TGCTAGCAGTTTTGGTCTCAAA 58.449 40.909 14.93 0.00 40.71 2.69
1365 1830 7.545362 AAATAGTGTAGATTGTTGCTAGCAG 57.455 36.000 18.45 0.00 0.00 4.24
1410 1875 6.195700 GCCCCTGATGAATATCCTACTACTA 58.804 44.000 0.00 0.00 32.09 1.82
1411 1876 5.026790 GCCCCTGATGAATATCCTACTACT 58.973 45.833 0.00 0.00 32.09 2.57
1412 1877 4.777896 TGCCCCTGATGAATATCCTACTAC 59.222 45.833 0.00 0.00 32.09 2.73
1471 1936 4.437390 CCATGCCGTCTCAATAAACTGTTC 60.437 45.833 0.00 0.00 0.00 3.18
1488 1953 2.630098 TGTAGCTACTCTGATCCATGCC 59.370 50.000 23.84 0.00 0.00 4.40
1489 1954 3.320541 ACTGTAGCTACTCTGATCCATGC 59.679 47.826 23.84 0.00 0.00 4.06
1490 1955 4.320129 CGACTGTAGCTACTCTGATCCATG 60.320 50.000 23.84 4.94 0.00 3.66
1509 1974 3.485743 GCGAAAACAAAATTTCAGCGACT 59.514 39.130 0.00 0.00 38.87 4.18
1531 1997 9.817365 CCAAAATATTAGCGTCATAATTCTCTG 57.183 33.333 0.00 0.00 0.00 3.35
1541 2041 5.353123 GGTCTCAACCAAAATATTAGCGTCA 59.647 40.000 0.00 0.00 45.68 4.35
1730 2586 0.615850 AGTAAAGAGGGGACAGCTGC 59.384 55.000 15.27 6.61 0.00 5.25
1820 2780 5.519206 GGTCTGTAAATCTGTAACCGACATC 59.481 44.000 0.00 0.00 37.45 3.06
1869 2862 0.746659 GCAACCATTCATGTAGGGGC 59.253 55.000 7.96 0.00 0.00 5.80
2180 3202 1.337260 TGCCTTCTCGTGCTCTTCTTC 60.337 52.381 0.00 0.00 0.00 2.87
2584 6971 7.787623 TCCATCATCAGCTATCTCATCTTTA 57.212 36.000 0.00 0.00 0.00 1.85
2687 7074 3.740832 CACATCAATCATACACCGCGTAT 59.259 43.478 4.92 0.00 41.74 3.06
2742 7606 7.164230 AGTACAAGTCATGAAAACCAAACAA 57.836 32.000 0.00 0.00 0.00 2.83
2915 7779 6.100424 AGCCTCTTAGCATATACACTTCCTTT 59.900 38.462 0.00 0.00 34.23 3.11
2922 7786 9.092876 GATCATAAAGCCTCTTAGCATATACAC 57.907 37.037 0.00 0.00 34.23 2.90
2999 7876 7.942341 AGTAAAACATTCCTTACATGAACTGGA 59.058 33.333 0.00 0.00 31.65 3.86
3072 7950 1.149987 GACACAATTTCACGGCGGTA 58.850 50.000 13.24 0.00 0.00 4.02
3113 7994 2.259266 TTGCATCAGTCAGCAGAACA 57.741 45.000 0.00 0.00 42.39 3.18
3232 8406 6.406692 TGAAATCTATGGCTAGGTACACTC 57.593 41.667 0.00 0.00 0.00 3.51
3367 8571 2.416431 GGCAGAAGACCAATGAATGCAC 60.416 50.000 0.00 0.00 33.94 4.57
3379 9448 2.751806 CCATCTTTCTTGGGCAGAAGAC 59.248 50.000 0.00 0.00 42.76 3.01
3521 9639 8.321353 TCTCTTCTTTATGAATGCACTTTAGGA 58.679 33.333 0.00 0.00 33.71 2.94
3524 9643 9.507329 ACTTCTCTTCTTTATGAATGCACTTTA 57.493 29.630 0.00 0.00 33.71 1.85
3592 9793 3.286329 ACCCACGACAGTTACCTTTTT 57.714 42.857 0.00 0.00 0.00 1.94
3593 9794 3.286329 AACCCACGACAGTTACCTTTT 57.714 42.857 0.00 0.00 0.00 2.27
3594 9795 2.946990 CAAACCCACGACAGTTACCTTT 59.053 45.455 0.00 0.00 0.00 3.11
3595 9796 2.092807 ACAAACCCACGACAGTTACCTT 60.093 45.455 0.00 0.00 0.00 3.50
3596 9797 1.487558 ACAAACCCACGACAGTTACCT 59.512 47.619 0.00 0.00 0.00 3.08
3597 9798 1.869132 GACAAACCCACGACAGTTACC 59.131 52.381 0.00 0.00 0.00 2.85
3598 9799 2.286025 GTGACAAACCCACGACAGTTAC 59.714 50.000 0.00 0.00 0.00 2.50
3599 9800 2.553086 GTGACAAACCCACGACAGTTA 58.447 47.619 0.00 0.00 0.00 2.24
3600 9801 1.375551 GTGACAAACCCACGACAGTT 58.624 50.000 0.00 0.00 0.00 3.16
3601 9802 3.074594 GTGACAAACCCACGACAGT 57.925 52.632 0.00 0.00 0.00 3.55
3607 9808 2.190841 CCCACCGTGACAAACCCAC 61.191 63.158 0.00 0.00 0.00 4.61
3608 9809 2.193517 CCCACCGTGACAAACCCA 59.806 61.111 0.00 0.00 0.00 4.51
3609 9810 1.038681 AAACCCACCGTGACAAACCC 61.039 55.000 0.00 0.00 0.00 4.11
3610 9811 0.101579 CAAACCCACCGTGACAAACC 59.898 55.000 0.00 0.00 0.00 3.27
3611 9812 0.812549 ACAAACCCACCGTGACAAAC 59.187 50.000 0.00 0.00 0.00 2.93
3612 9813 1.096416 GACAAACCCACCGTGACAAA 58.904 50.000 0.00 0.00 0.00 2.83
3613 9814 0.035343 TGACAAACCCACCGTGACAA 60.035 50.000 0.00 0.00 0.00 3.18
3614 9815 0.745128 GTGACAAACCCACCGTGACA 60.745 55.000 0.00 0.00 0.00 3.58
3615 9816 1.768112 CGTGACAAACCCACCGTGAC 61.768 60.000 0.00 0.00 0.00 3.67
3616 9817 1.521906 CGTGACAAACCCACCGTGA 60.522 57.895 0.00 0.00 0.00 4.35
3617 9818 2.539338 CCGTGACAAACCCACCGTG 61.539 63.158 0.00 0.00 0.00 4.94
3618 9819 2.203098 CCGTGACAAACCCACCGT 60.203 61.111 0.00 0.00 0.00 4.83
3619 9820 3.656045 GCCGTGACAAACCCACCG 61.656 66.667 0.00 0.00 0.00 4.94
3620 9821 1.668101 TTTGCCGTGACAAACCCACC 61.668 55.000 0.00 0.00 34.68 4.61
3621 9822 0.387565 ATTTGCCGTGACAAACCCAC 59.612 50.000 0.00 0.00 42.01 4.61
3622 9823 0.387202 CATTTGCCGTGACAAACCCA 59.613 50.000 0.00 0.00 42.01 4.51
3623 9824 0.387565 ACATTTGCCGTGACAAACCC 59.612 50.000 0.00 0.00 42.01 4.11
3624 9825 1.601914 GGACATTTGCCGTGACAAACC 60.602 52.381 0.00 0.00 42.01 3.27
3625 9826 1.336755 AGGACATTTGCCGTGACAAAC 59.663 47.619 0.00 0.00 42.01 2.93
3626 9827 1.686355 AGGACATTTGCCGTGACAAA 58.314 45.000 0.00 0.00 43.27 2.83
3627 9828 2.422597 CTAGGACATTTGCCGTGACAA 58.577 47.619 0.00 0.00 0.00 3.18
3628 9829 1.943968 GCTAGGACATTTGCCGTGACA 60.944 52.381 0.00 0.00 0.00 3.58
3629 9830 0.727398 GCTAGGACATTTGCCGTGAC 59.273 55.000 0.00 0.00 0.00 3.67
3630 9831 0.323302 TGCTAGGACATTTGCCGTGA 59.677 50.000 0.00 0.00 0.00 4.35
3631 9832 1.164411 TTGCTAGGACATTTGCCGTG 58.836 50.000 0.00 0.00 0.00 4.94
3632 9833 1.904287 TTTGCTAGGACATTTGCCGT 58.096 45.000 0.00 0.00 0.00 5.68
3633 9834 2.415893 CCTTTTGCTAGGACATTTGCCG 60.416 50.000 0.00 0.00 37.50 5.69
3634 9835 2.825532 TCCTTTTGCTAGGACATTTGCC 59.174 45.455 0.00 0.00 39.40 4.52
3642 9843 3.830755 ACGACTAAGTCCTTTTGCTAGGA 59.169 43.478 0.00 0.00 42.02 2.94
3643 9844 3.927142 CACGACTAAGTCCTTTTGCTAGG 59.073 47.826 0.00 0.00 36.59 3.02
3644 9845 3.927142 CCACGACTAAGTCCTTTTGCTAG 59.073 47.826 0.00 0.00 0.00 3.42
3645 9846 3.575256 TCCACGACTAAGTCCTTTTGCTA 59.425 43.478 0.00 0.00 0.00 3.49
3646 9847 2.367567 TCCACGACTAAGTCCTTTTGCT 59.632 45.455 0.00 0.00 0.00 3.91
3647 9848 2.737252 CTCCACGACTAAGTCCTTTTGC 59.263 50.000 0.00 0.00 0.00 3.68
3648 9849 2.737252 GCTCCACGACTAAGTCCTTTTG 59.263 50.000 0.00 0.00 0.00 2.44
3649 9850 2.289506 GGCTCCACGACTAAGTCCTTTT 60.290 50.000 0.00 0.00 0.00 2.27
3650 9851 1.275573 GGCTCCACGACTAAGTCCTTT 59.724 52.381 0.00 0.00 0.00 3.11
3651 9852 0.896226 GGCTCCACGACTAAGTCCTT 59.104 55.000 0.00 0.00 0.00 3.36
3652 9853 0.251653 TGGCTCCACGACTAAGTCCT 60.252 55.000 0.00 0.00 0.00 3.85
3653 9854 0.824759 ATGGCTCCACGACTAAGTCC 59.175 55.000 0.00 0.00 0.00 3.85
3654 9855 1.476891 TGATGGCTCCACGACTAAGTC 59.523 52.381 0.00 0.00 0.00 3.01
3655 9856 1.204941 GTGATGGCTCCACGACTAAGT 59.795 52.381 0.00 0.00 0.00 2.24
3656 9857 1.204704 TGTGATGGCTCCACGACTAAG 59.795 52.381 0.00 0.00 37.34 2.18
3657 9858 1.262417 TGTGATGGCTCCACGACTAA 58.738 50.000 0.00 0.00 37.34 2.24
3658 9859 1.067142 GTTGTGATGGCTCCACGACTA 60.067 52.381 17.20 0.00 42.67 2.59
3659 9860 0.320771 GTTGTGATGGCTCCACGACT 60.321 55.000 17.20 0.00 42.67 4.18
3660 9861 1.626654 CGTTGTGATGGCTCCACGAC 61.627 60.000 15.53 15.53 42.59 4.34
3661 9862 1.374125 CGTTGTGATGGCTCCACGA 60.374 57.895 0.00 1.61 37.34 4.35
3662 9863 2.390599 CCGTTGTGATGGCTCCACG 61.391 63.158 0.00 0.00 37.34 4.94
3663 9864 2.040544 CCCGTTGTGATGGCTCCAC 61.041 63.158 0.00 3.48 35.23 4.02
3664 9865 2.063015 AACCCGTTGTGATGGCTCCA 62.063 55.000 0.00 0.00 0.00 3.86
3665 9866 0.035820 TAACCCGTTGTGATGGCTCC 60.036 55.000 0.00 0.00 0.00 4.70
3666 9867 1.369625 CTAACCCGTTGTGATGGCTC 58.630 55.000 0.00 0.00 0.00 4.70
3667 9868 0.676782 GCTAACCCGTTGTGATGGCT 60.677 55.000 0.00 0.00 0.00 4.75
3668 9869 0.676782 AGCTAACCCGTTGTGATGGC 60.677 55.000 0.00 0.00 0.00 4.40
3669 9870 1.821216 AAGCTAACCCGTTGTGATGG 58.179 50.000 0.00 0.00 0.00 3.51
3670 9871 4.142687 CCTTTAAGCTAACCCGTTGTGATG 60.143 45.833 0.00 0.00 0.00 3.07
3671 9872 4.007659 CCTTTAAGCTAACCCGTTGTGAT 58.992 43.478 0.00 0.00 0.00 3.06
3672 9873 3.404899 CCTTTAAGCTAACCCGTTGTGA 58.595 45.455 0.00 0.00 0.00 3.58
3673 9874 2.486592 CCCTTTAAGCTAACCCGTTGTG 59.513 50.000 0.00 0.00 0.00 3.33
3674 9875 2.553685 CCCCTTTAAGCTAACCCGTTGT 60.554 50.000 0.00 0.00 0.00 3.32
3675 9876 2.089201 CCCCTTTAAGCTAACCCGTTG 58.911 52.381 0.00 0.00 0.00 4.10
3676 9877 1.706866 ACCCCTTTAAGCTAACCCGTT 59.293 47.619 0.00 0.00 0.00 4.44
3677 9878 1.365293 ACCCCTTTAAGCTAACCCGT 58.635 50.000 0.00 0.00 0.00 5.28
3678 9879 2.502142 AACCCCTTTAAGCTAACCCG 57.498 50.000 0.00 0.00 0.00 5.28
3679 9880 5.649782 GTTTAACCCCTTTAAGCTAACCC 57.350 43.478 0.00 0.00 31.11 4.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.