Multiple sequence alignment - TraesCS3B01G046600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G046600 chr3B 100.000 3928 0 0 1 3928 23715986 23712059 0.000000e+00 7254.0
1 TraesCS3B01G046600 chr3B 97.872 1034 20 1 1 1034 120572059 120573090 0.000000e+00 1786.0
2 TraesCS3B01G046600 chr3B 92.955 511 34 2 3420 3928 396961532 396962042 0.000000e+00 743.0
3 TraesCS3B01G046600 chr3B 92.564 511 36 2 3420 3928 67823541 67823031 0.000000e+00 732.0
4 TraesCS3B01G046600 chr3B 92.564 511 36 2 3420 3928 67830966 67830456 0.000000e+00 732.0
5 TraesCS3B01G046600 chr3B 84.000 275 28 7 2604 2877 23703255 23702996 2.340000e-62 250.0
6 TraesCS3B01G046600 chr3B 93.491 169 9 2 2381 2548 523154209 523154376 2.340000e-62 250.0
7 TraesCS3B01G046600 chr3B 93.878 49 3 0 2937 2985 23690793 23690745 1.510000e-09 75.0
8 TraesCS3B01G046600 chr5B 98.453 1034 14 1 1 1034 50281183 50280152 0.000000e+00 1820.0
9 TraesCS3B01G046600 chr5B 97.872 1034 20 1 1 1034 115866802 115865771 0.000000e+00 1786.0
10 TraesCS3B01G046600 chr5B 98.613 937 11 1 98 1034 576230377 576229443 0.000000e+00 1657.0
11 TraesCS3B01G046600 chr5B 88.127 1036 117 5 1 1034 701555126 701556157 0.000000e+00 1227.0
12 TraesCS3B01G046600 chr5B 84.957 1037 144 8 1 1034 26030675 26031702 0.000000e+00 1040.0
13 TraesCS3B01G046600 chr5B 92.308 182 10 4 2381 2561 600648234 600648056 5.040000e-64 255.0
14 TraesCS3B01G046600 chr7B 98.259 1034 16 1 1 1034 504950676 504951707 0.000000e+00 1808.0
15 TraesCS3B01G046600 chr7B 91.683 1034 84 1 1 1034 184228476 184229507 0.000000e+00 1432.0
16 TraesCS3B01G046600 chr7B 91.992 512 35 6 3420 3928 429603333 429602825 0.000000e+00 713.0
17 TraesCS3B01G046600 chr7B 90.785 293 27 0 3130 3422 194845292 194845584 3.680000e-105 392.0
18 TraesCS3B01G046600 chr7B 90.102 293 29 0 3130 3422 194811725 194812017 7.960000e-102 381.0
19 TraesCS3B01G046600 chr7B 90.102 293 29 0 3130 3422 359609376 359609084 7.960000e-102 381.0
20 TraesCS3B01G046600 chr7B 90.169 295 25 2 3130 3422 497093216 497093508 7.960000e-102 381.0
21 TraesCS3B01G046600 chr7B 89.761 293 30 0 3130 3422 359602062 359601770 3.710000e-100 375.0
22 TraesCS3B01G046600 chr7B 89.761 293 30 0 3130 3422 497100445 497100737 3.710000e-100 375.0
23 TraesCS3B01G046600 chr4A 97.969 1034 19 1 1 1034 511237356 511238387 0.000000e+00 1792.0
24 TraesCS3B01G046600 chr4A 84.586 1038 148 11 1 1033 569865171 569866201 0.000000e+00 1020.0
25 TraesCS3B01G046600 chr4A 79.003 1043 191 25 6 1034 577735869 577736897 0.000000e+00 688.0
26 TraesCS3B01G046600 chr4A 93.373 166 10 1 2382 2546 346686995 346686830 1.090000e-60 244.0
27 TraesCS3B01G046600 chr7A 97.582 1034 23 1 1 1034 22372677 22373708 0.000000e+00 1770.0
28 TraesCS3B01G046600 chr6B 97.389 1034 25 1 1 1034 665533692 665534723 0.000000e+00 1759.0
29 TraesCS3B01G046600 chr6B 91.813 513 38 4 3419 3928 351411995 351412506 0.000000e+00 712.0
30 TraesCS3B01G046600 chr6A 97.292 1034 26 1 1 1034 207819607 207818576 0.000000e+00 1753.0
31 TraesCS3B01G046600 chr6A 84.438 996 147 8 2 994 77978859 77979849 0.000000e+00 974.0
32 TraesCS3B01G046600 chr6A 88.978 372 41 0 663 1034 581737601 581737230 9.940000e-126 460.0
33 TraesCS3B01G046600 chr6A 72.358 984 236 31 70 1034 409545064 409546030 1.070000e-70 278.0
34 TraesCS3B01G046600 chr6A 77.700 426 82 13 612 1031 31893850 31893432 8.430000e-62 248.0
35 TraesCS3B01G046600 chr6A 93.452 168 10 1 2382 2548 370675604 370675437 8.430000e-62 248.0
36 TraesCS3B01G046600 chr6A 92.771 166 10 2 2382 2546 537229481 537229317 5.070000e-59 239.0
37 TraesCS3B01G046600 chr6A 89.362 188 17 3 2369 2555 96716135 96715950 2.360000e-57 233.0
38 TraesCS3B01G046600 chr6A 90.909 176 13 3 2381 2554 105042076 105041902 2.360000e-57 233.0
39 TraesCS3B01G046600 chr6A 92.169 166 12 1 2381 2545 268019354 268019189 2.360000e-57 233.0
40 TraesCS3B01G046600 chr3D 91.939 1253 79 6 1136 2371 16193451 16192204 0.000000e+00 1735.0
41 TraesCS3B01G046600 chr3D 88.101 1227 117 10 1153 2362 16159994 16158780 0.000000e+00 1430.0
42 TraesCS3B01G046600 chr3D 93.421 380 20 4 2543 2920 16192125 16191749 3.430000e-155 558.0
43 TraesCS3B01G046600 chr3D 95.288 191 8 1 2935 3125 16191764 16191575 6.380000e-78 302.0
44 TraesCS3B01G046600 chr3D 81.429 350 60 4 687 1034 101542393 101542739 8.310000e-72 281.0
45 TraesCS3B01G046600 chr3D 82.168 286 28 7 2093 2371 16155947 16155678 1.420000e-54 224.0
46 TraesCS3B01G046600 chr3D 96.842 95 3 0 1038 1132 16198344 16198250 4.060000e-35 159.0
47 TraesCS3B01G046600 chr3A 89.655 1363 111 12 1038 2371 20188899 20190260 0.000000e+00 1709.0
48 TraesCS3B01G046600 chr3A 78.368 1017 182 28 30 1036 411260504 411261492 3.330000e-175 625.0
49 TraesCS3B01G046600 chr3A 92.568 296 17 4 2543 2838 20206370 20206660 1.690000e-113 420.0
50 TraesCS3B01G046600 chr5D 83.189 1041 165 9 1 1035 135638472 135639508 0.000000e+00 944.0
51 TraesCS3B01G046600 chr5D 79.890 363 62 11 687 1043 343380146 343380503 5.040000e-64 255.0
52 TraesCS3B01G046600 chr5D 93.491 169 9 2 2381 2548 487986104 487985937 2.340000e-62 250.0
53 TraesCS3B01G046600 chr5D 92.398 171 11 2 2381 2550 557426963 557427132 3.920000e-60 243.0
54 TraesCS3B01G046600 chr4B 92.773 512 33 4 3420 3928 242385250 242384740 0.000000e+00 737.0
55 TraesCS3B01G046600 chr4B 91.992 512 36 5 3420 3928 177574450 177573941 0.000000e+00 713.0
56 TraesCS3B01G046600 chr4B 91.992 512 35 5 3420 3928 321412269 321412777 0.000000e+00 713.0
57 TraesCS3B01G046600 chr4B 84.722 360 50 5 498 854 402820615 402820972 4.830000e-94 355.0
58 TraesCS3B01G046600 chr4B 93.373 166 10 1 2382 2546 575778157 575778322 1.090000e-60 244.0
59 TraesCS3B01G046600 chr4B 92.715 151 11 0 847 997 402826411 402826561 6.610000e-53 219.0
60 TraesCS3B01G046600 chr1B 91.992 512 36 5 3420 3928 422857153 422857662 0.000000e+00 713.0
61 TraesCS3B01G046600 chr1B 86.918 451 59 0 1 451 47190708 47191158 1.260000e-139 507.0
62 TraesCS3B01G046600 chr1B 78.610 748 135 20 297 1033 564764978 564765711 4.590000e-129 472.0
63 TraesCS3B01G046600 chr1B 89.761 293 30 0 3130 3422 349339575 349339867 3.710000e-100 375.0
64 TraesCS3B01G046600 chr1B 89.761 293 30 0 3130 3422 349346301 349346593 3.710000e-100 375.0
65 TraesCS3B01G046600 chr1A 79.094 1038 200 14 6 1034 238698040 238699069 0.000000e+00 699.0
66 TraesCS3B01G046600 chr1A 92.727 165 11 1 2382 2545 74014404 74014240 1.820000e-58 237.0
67 TraesCS3B01G046600 chr1A 92.727 165 10 2 2382 2545 496077620 496077783 1.820000e-58 237.0
68 TraesCS3B01G046600 chr1A 90.395 177 13 4 2382 2556 56883765 56883591 3.050000e-56 230.0
69 TraesCS3B01G046600 chr1A 91.124 169 13 2 2382 2549 33392701 33392534 1.100000e-55 228.0
70 TraesCS3B01G046600 chr2D 80.332 783 133 19 262 1034 434695003 434695774 1.220000e-159 573.0
71 TraesCS3B01G046600 chr2D 94.012 167 9 1 2382 2547 194458617 194458783 6.520000e-63 252.0
72 TraesCS3B01G046600 chr2D 92.486 173 10 3 2382 2553 431209873 431209703 1.090000e-60 244.0
73 TraesCS3B01G046600 chr2D 100.000 28 0 0 2169 2196 431394589 431394616 7.000000e-03 52.8
74 TraesCS3B01G046600 chr2B 91.096 292 20 5 3130 3419 130241209 130240922 1.320000e-104 390.0
75 TraesCS3B01G046600 chr7D 94.048 168 8 2 2381 2547 530735946 530736112 1.810000e-63 254.0
76 TraesCS3B01G046600 chr7D 93.023 172 11 1 2375 2545 315667913 315668084 2.340000e-62 250.0
77 TraesCS3B01G046600 chr6D 94.048 168 9 1 2381 2547 392278576 392278743 1.810000e-63 254.0
78 TraesCS3B01G046600 chr6D 93.939 165 9 1 2382 2545 260024510 260024674 8.430000e-62 248.0
79 TraesCS3B01G046600 chr4D 92.899 169 12 0 2382 2550 505245857 505245689 3.030000e-61 246.0
80 TraesCS3B01G046600 chr4D 92.857 168 11 1 2382 2548 196810655 196810822 3.920000e-60 243.0
81 TraesCS3B01G046600 chr4D 92.771 166 11 1 2382 2546 190480243 190480408 5.070000e-59 239.0
82 TraesCS3B01G046600 chr4D 92.262 168 12 1 2382 2548 173125681 173125848 1.820000e-58 237.0
83 TraesCS3B01G046600 chr4D 92.727 165 10 2 2382 2545 300876877 300876714 1.820000e-58 237.0
84 TraesCS3B01G046600 chr4D 90.751 173 13 3 2382 2553 216792819 216792649 1.100000e-55 228.0
85 TraesCS3B01G046600 chr4D 77.444 266 46 12 773 1034 156683298 156683553 3.160000e-31 147.0
86 TraesCS3B01G046600 chr1D 92.857 168 11 1 2381 2547 365727164 365727331 3.920000e-60 243.0
87 TraesCS3B01G046600 chr1D 93.333 165 10 1 2382 2545 465958552 465958716 3.920000e-60 243.0
88 TraesCS3B01G046600 chr1D 92.727 165 10 2 2382 2545 490423316 490423153 1.820000e-58 237.0
89 TraesCS3B01G046600 chrUn 92.727 165 10 2 2382 2545 340388158 340388321 1.820000e-58 237.0
90 TraesCS3B01G046600 chrUn 92.216 167 12 1 2382 2547 74119615 74119449 6.560000e-58 235.0
91 TraesCS3B01G046600 chrUn 91.667 168 12 2 2382 2548 25754365 25754531 8.490000e-57 231.0
92 TraesCS3B01G046600 chrUn 79.037 353 63 11 687 1034 259874665 259875011 8.490000e-57 231.0
93 TraesCS3B01G046600 chrUn 92.121 165 12 1 2382 2545 467523598 467523762 8.490000e-57 231.0
94 TraesCS3B01G046600 chrUn 91.176 170 13 2 2382 2549 15911384 15911553 3.050000e-56 230.0
95 TraesCS3B01G046600 chrUn 90.395 177 13 4 2382 2556 63333348 63333174 3.050000e-56 230.0
96 TraesCS3B01G046600 chrUn 91.566 166 13 1 2382 2546 294907552 294907387 1.100000e-55 228.0
97 TraesCS3B01G046600 chrUn 91.071 168 13 2 2382 2548 2124916 2125082 3.950000e-55 226.0
98 TraesCS3B01G046600 chrUn 91.515 165 12 2 2382 2545 101510844 101510681 3.950000e-55 226.0
99 TraesCS3B01G046600 chrUn 91.071 168 13 2 2382 2548 223282634 223282800 3.950000e-55 226.0
100 TraesCS3B01G046600 chrUn 90.230 174 14 3 2382 2554 84290714 84290543 1.420000e-54 224.0
101 TraesCS3B01G046600 chrUn 90.230 174 14 3 2382 2554 226944039 226943868 1.420000e-54 224.0
102 TraesCS3B01G046600 chrUn 78.873 284 53 7 752 1033 93868901 93868623 6.700000e-43 185.0
103 TraesCS3B01G046600 chr5A 91.429 175 12 3 2373 2545 44990691 44990864 1.820000e-58 237.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G046600 chr3B 23712059 23715986 3927 True 7254 7254 100.000000 1 3928 1 chr3B.!!$R3 3927
1 TraesCS3B01G046600 chr3B 120572059 120573090 1031 False 1786 1786 97.872000 1 1034 1 chr3B.!!$F1 1033
2 TraesCS3B01G046600 chr3B 396961532 396962042 510 False 743 743 92.955000 3420 3928 1 chr3B.!!$F2 508
3 TraesCS3B01G046600 chr3B 67823031 67823541 510 True 732 732 92.564000 3420 3928 1 chr3B.!!$R4 508
4 TraesCS3B01G046600 chr3B 67830456 67830966 510 True 732 732 92.564000 3420 3928 1 chr3B.!!$R5 508
5 TraesCS3B01G046600 chr5B 50280152 50281183 1031 True 1820 1820 98.453000 1 1034 1 chr5B.!!$R1 1033
6 TraesCS3B01G046600 chr5B 115865771 115866802 1031 True 1786 1786 97.872000 1 1034 1 chr5B.!!$R2 1033
7 TraesCS3B01G046600 chr5B 576229443 576230377 934 True 1657 1657 98.613000 98 1034 1 chr5B.!!$R3 936
8 TraesCS3B01G046600 chr5B 701555126 701556157 1031 False 1227 1227 88.127000 1 1034 1 chr5B.!!$F2 1033
9 TraesCS3B01G046600 chr5B 26030675 26031702 1027 False 1040 1040 84.957000 1 1034 1 chr5B.!!$F1 1033
10 TraesCS3B01G046600 chr7B 504950676 504951707 1031 False 1808 1808 98.259000 1 1034 1 chr7B.!!$F6 1033
11 TraesCS3B01G046600 chr7B 184228476 184229507 1031 False 1432 1432 91.683000 1 1034 1 chr7B.!!$F1 1033
12 TraesCS3B01G046600 chr7B 429602825 429603333 508 True 713 713 91.992000 3420 3928 1 chr7B.!!$R3 508
13 TraesCS3B01G046600 chr4A 511237356 511238387 1031 False 1792 1792 97.969000 1 1034 1 chr4A.!!$F1 1033
14 TraesCS3B01G046600 chr4A 569865171 569866201 1030 False 1020 1020 84.586000 1 1033 1 chr4A.!!$F2 1032
15 TraesCS3B01G046600 chr4A 577735869 577736897 1028 False 688 688 79.003000 6 1034 1 chr4A.!!$F3 1028
16 TraesCS3B01G046600 chr7A 22372677 22373708 1031 False 1770 1770 97.582000 1 1034 1 chr7A.!!$F1 1033
17 TraesCS3B01G046600 chr6B 665533692 665534723 1031 False 1759 1759 97.389000 1 1034 1 chr6B.!!$F2 1033
18 TraesCS3B01G046600 chr6B 351411995 351412506 511 False 712 712 91.813000 3419 3928 1 chr6B.!!$F1 509
19 TraesCS3B01G046600 chr6A 207818576 207819607 1031 True 1753 1753 97.292000 1 1034 1 chr6A.!!$R4 1033
20 TraesCS3B01G046600 chr6A 77978859 77979849 990 False 974 974 84.438000 2 994 1 chr6A.!!$F1 992
21 TraesCS3B01G046600 chr6A 409545064 409546030 966 False 278 278 72.358000 70 1034 1 chr6A.!!$F2 964
22 TraesCS3B01G046600 chr3D 16191575 16193451 1876 True 865 1735 93.549333 1136 3125 3 chr3D.!!$R3 1989
23 TraesCS3B01G046600 chr3D 16155678 16159994 4316 True 827 1430 85.134500 1153 2371 2 chr3D.!!$R2 1218
24 TraesCS3B01G046600 chr3A 20188899 20190260 1361 False 1709 1709 89.655000 1038 2371 1 chr3A.!!$F1 1333
25 TraesCS3B01G046600 chr3A 411260504 411261492 988 False 625 625 78.368000 30 1036 1 chr3A.!!$F3 1006
26 TraesCS3B01G046600 chr5D 135638472 135639508 1036 False 944 944 83.189000 1 1035 1 chr5D.!!$F1 1034
27 TraesCS3B01G046600 chr4B 242384740 242385250 510 True 737 737 92.773000 3420 3928 1 chr4B.!!$R2 508
28 TraesCS3B01G046600 chr4B 177573941 177574450 509 True 713 713 91.992000 3420 3928 1 chr4B.!!$R1 508
29 TraesCS3B01G046600 chr4B 321412269 321412777 508 False 713 713 91.992000 3420 3928 1 chr4B.!!$F1 508
30 TraesCS3B01G046600 chr1B 422857153 422857662 509 False 713 713 91.992000 3420 3928 1 chr1B.!!$F4 508
31 TraesCS3B01G046600 chr1B 564764978 564765711 733 False 472 472 78.610000 297 1033 1 chr1B.!!$F5 736
32 TraesCS3B01G046600 chr1A 238698040 238699069 1029 False 699 699 79.094000 6 1034 1 chr1A.!!$F1 1028
33 TraesCS3B01G046600 chr2D 434695003 434695774 771 False 573 573 80.332000 262 1034 1 chr2D.!!$F3 772

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
140 141 4.021102 ACAACGGATGTCCTGAAAAGAT 57.979 40.909 0.00 0.0 37.96 2.40 F
1051 1062 1.772819 AAGAGTCAGGCTGGTGGTGG 61.773 60.000 15.73 0.0 0.00 4.61 F
1553 1580 0.250513 GCCTCCAGTTCATCGACCTT 59.749 55.000 0.00 0.0 0.00 3.50 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1062 1073 0.172803 AACACATACGGCTCGAGTCC 59.827 55.0 12.25 13.22 0.0 3.85 R
2550 5717 0.179100 CATGGCCACGGTCTCTGTAG 60.179 60.0 8.16 0.00 0.0 2.74 R
3295 6464 0.038599 TCATTCCACTGTGCCATGCT 59.961 50.0 1.29 0.00 0.0 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
140 141 4.021102 ACAACGGATGTCCTGAAAAGAT 57.979 40.909 0.00 0.00 37.96 2.40
1013 1023 8.707938 ACAATTGCTTCTGAATAAATAAAGCC 57.292 30.769 5.05 0.00 41.21 4.35
1051 1062 1.772819 AAGAGTCAGGCTGGTGGTGG 61.773 60.000 15.73 0.00 0.00 4.61
1052 1063 2.448542 AGTCAGGCTGGTGGTGGT 60.449 61.111 15.73 0.00 0.00 4.16
1055 1066 2.281761 CAGGCTGGTGGTGGTGTC 60.282 66.667 6.61 0.00 0.00 3.67
1056 1067 3.570212 AGGCTGGTGGTGGTGTCC 61.570 66.667 0.00 0.00 0.00 4.02
1059 1070 2.343758 CTGGTGGTGGTGTCCGAG 59.656 66.667 0.00 0.00 0.00 4.63
1062 1073 2.049433 GTGGTGGTGTCCGAGTCG 60.049 66.667 5.29 5.29 0.00 4.18
1084 1099 0.370273 CTCGAGCCGTATGTGTTTGC 59.630 55.000 0.00 0.00 0.00 3.68
1085 1100 1.058748 CGAGCCGTATGTGTTTGCG 59.941 57.895 0.00 0.00 0.00 4.85
1087 1102 0.370273 GAGCCGTATGTGTTTGCGAG 59.630 55.000 0.00 0.00 0.00 5.03
1108 1123 2.514824 GAAGCCCAGCGGGATGTC 60.515 66.667 16.53 7.71 42.68 3.06
1109 1124 3.329542 GAAGCCCAGCGGGATGTCA 62.330 63.158 16.53 0.00 42.68 3.58
1126 1145 6.202954 GGGATGTCACTATAAAGAATGGAACG 59.797 42.308 0.00 0.00 0.00 3.95
1132 1151 0.671163 TAAAGAATGGAACGCGCGGT 60.671 50.000 35.22 31.35 0.00 5.68
1134 1153 4.811761 GAATGGAACGCGCGGTGC 62.812 66.667 33.26 33.26 41.47 5.01
1183 1206 1.298413 CGAAGACGACGATGGCGAT 60.298 57.895 0.00 0.00 42.66 4.58
1517 1544 2.729479 CCCTCAGCACATCGAGCCT 61.729 63.158 0.00 0.00 0.00 4.58
1546 1573 3.329889 TGCCCGCCTCCAGTTCAT 61.330 61.111 0.00 0.00 0.00 2.57
1551 1578 1.519455 CGCCTCCAGTTCATCGACC 60.519 63.158 0.00 0.00 0.00 4.79
1553 1580 0.250513 GCCTCCAGTTCATCGACCTT 59.749 55.000 0.00 0.00 0.00 3.50
1619 1646 2.264794 GATCACCCGCCTTGTCGT 59.735 61.111 0.00 0.00 0.00 4.34
1694 1721 2.435685 CGTTTGCACGCGAGAAATAT 57.564 45.000 15.93 0.00 40.18 1.28
1717 1744 0.807667 CAGCATCTACACTCGTGGCC 60.808 60.000 0.00 0.00 34.19 5.36
1762 1789 1.612442 CCTCCTGAGTTCCCCGGAA 60.612 63.158 0.73 0.00 0.00 4.30
1911 1938 2.383527 GCCGCCAACAAGAGTCGAG 61.384 63.158 0.00 0.00 0.00 4.04
2010 2049 1.270826 CACATGACCTGTCGACAGACT 59.729 52.381 40.21 26.75 46.59 3.24
2013 2055 3.057456 ACATGACCTGTCGACAGACTTAC 60.057 47.826 40.21 25.68 46.59 2.34
2043 2085 0.321996 AGTTTGAGGTCTTCGAGGCC 59.678 55.000 0.00 0.00 41.32 5.19
2088 2130 3.391382 GGACGGTGGAGGGAGGTG 61.391 72.222 0.00 0.00 0.00 4.00
2208 2250 4.070552 GAGCGTCCAAGGCTCGGT 62.071 66.667 5.96 0.00 44.62 4.69
2371 5538 2.412847 CGACGATTTGAGGTTTTGAGCC 60.413 50.000 0.00 0.00 0.00 4.70
2372 5539 2.552315 GACGATTTGAGGTTTTGAGCCA 59.448 45.455 0.00 0.00 0.00 4.75
2373 5540 2.293399 ACGATTTGAGGTTTTGAGCCAC 59.707 45.455 0.00 0.00 0.00 5.01
2374 5541 2.554032 CGATTTGAGGTTTTGAGCCACT 59.446 45.455 0.00 0.00 0.00 4.00
2375 5542 3.751175 CGATTTGAGGTTTTGAGCCACTA 59.249 43.478 0.00 0.00 0.00 2.74
2376 5543 4.142816 CGATTTGAGGTTTTGAGCCACTAG 60.143 45.833 0.00 0.00 0.00 2.57
2377 5544 3.857157 TTGAGGTTTTGAGCCACTAGT 57.143 42.857 0.00 0.00 0.00 2.57
2378 5545 3.857157 TGAGGTTTTGAGCCACTAGTT 57.143 42.857 0.00 0.00 0.00 2.24
2379 5546 3.740115 TGAGGTTTTGAGCCACTAGTTC 58.260 45.455 0.00 0.00 0.00 3.01
2380 5547 2.737252 GAGGTTTTGAGCCACTAGTTCG 59.263 50.000 0.00 0.00 0.00 3.95
2381 5548 2.104281 AGGTTTTGAGCCACTAGTTCGT 59.896 45.455 0.00 0.00 0.00 3.85
2382 5549 3.322828 AGGTTTTGAGCCACTAGTTCGTA 59.677 43.478 0.00 0.00 0.00 3.43
2383 5550 3.431233 GGTTTTGAGCCACTAGTTCGTAC 59.569 47.826 0.00 0.00 0.00 3.67
2384 5551 4.304939 GTTTTGAGCCACTAGTTCGTACT 58.695 43.478 0.00 0.00 38.44 2.73
2385 5552 3.844577 TTGAGCCACTAGTTCGTACTC 57.155 47.619 0.00 0.00 35.78 2.59
2386 5553 2.089980 TGAGCCACTAGTTCGTACTCC 58.910 52.381 0.00 0.00 35.78 3.85
2387 5554 1.404748 GAGCCACTAGTTCGTACTCCC 59.595 57.143 0.00 0.00 35.78 4.30
2388 5555 1.005687 AGCCACTAGTTCGTACTCCCT 59.994 52.381 0.00 0.00 35.78 4.20
2389 5556 1.404748 GCCACTAGTTCGTACTCCCTC 59.595 57.143 0.00 0.00 35.78 4.30
2390 5557 2.022934 CCACTAGTTCGTACTCCCTCC 58.977 57.143 0.00 0.00 35.78 4.30
2391 5558 1.669779 CACTAGTTCGTACTCCCTCCG 59.330 57.143 0.00 0.00 35.78 4.63
2392 5559 1.280421 ACTAGTTCGTACTCCCTCCGT 59.720 52.381 0.00 0.00 35.78 4.69
2393 5560 2.290577 ACTAGTTCGTACTCCCTCCGTT 60.291 50.000 0.00 0.00 35.78 4.44
2394 5561 1.172175 AGTTCGTACTCCCTCCGTTC 58.828 55.000 0.00 0.00 0.00 3.95
2395 5562 1.172175 GTTCGTACTCCCTCCGTTCT 58.828 55.000 0.00 0.00 0.00 3.01
2396 5563 1.543358 GTTCGTACTCCCTCCGTTCTT 59.457 52.381 0.00 0.00 0.00 2.52
2397 5564 2.749621 GTTCGTACTCCCTCCGTTCTTA 59.250 50.000 0.00 0.00 0.00 2.10
2398 5565 3.071874 TCGTACTCCCTCCGTTCTTAA 57.928 47.619 0.00 0.00 0.00 1.85
2399 5566 3.420893 TCGTACTCCCTCCGTTCTTAAA 58.579 45.455 0.00 0.00 0.00 1.52
2400 5567 4.019174 TCGTACTCCCTCCGTTCTTAAAT 58.981 43.478 0.00 0.00 0.00 1.40
2401 5568 5.192927 TCGTACTCCCTCCGTTCTTAAATA 58.807 41.667 0.00 0.00 0.00 1.40
2402 5569 5.829924 TCGTACTCCCTCCGTTCTTAAATAT 59.170 40.000 0.00 0.00 0.00 1.28
2403 5570 6.322201 TCGTACTCCCTCCGTTCTTAAATATT 59.678 38.462 0.00 0.00 0.00 1.28
2404 5571 6.982724 CGTACTCCCTCCGTTCTTAAATATTT 59.017 38.462 5.89 5.89 0.00 1.40
2405 5572 7.042925 CGTACTCCCTCCGTTCTTAAATATTTG 60.043 40.741 11.05 0.00 0.00 2.32
2406 5573 6.718294 ACTCCCTCCGTTCTTAAATATTTGT 58.282 36.000 11.05 0.00 0.00 2.83
2407 5574 6.822170 ACTCCCTCCGTTCTTAAATATTTGTC 59.178 38.462 11.05 0.00 0.00 3.18
2408 5575 6.954232 TCCCTCCGTTCTTAAATATTTGTCT 58.046 36.000 11.05 0.00 0.00 3.41
2409 5576 7.399634 TCCCTCCGTTCTTAAATATTTGTCTT 58.600 34.615 11.05 0.00 0.00 3.01
2410 5577 7.886446 TCCCTCCGTTCTTAAATATTTGTCTTT 59.114 33.333 11.05 0.00 0.00 2.52
2411 5578 8.182227 CCCTCCGTTCTTAAATATTTGTCTTTC 58.818 37.037 11.05 0.00 0.00 2.62
2412 5579 8.947115 CCTCCGTTCTTAAATATTTGTCTTTCT 58.053 33.333 11.05 0.00 0.00 2.52
2428 5595 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
2429 5596 8.370493 TGTCTTTCTAGAGATTTCAACAAGTG 57.630 34.615 0.00 0.00 0.00 3.16
2430 5597 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
2431 5598 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
2432 5599 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
2433 5600 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
2434 5601 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
2435 5602 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
2436 5603 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
2439 5606 9.376075 AGAGATTTCAACAAGTGACTACATATG 57.624 33.333 0.00 0.00 35.39 1.78
2440 5607 9.371136 GAGATTTCAACAAGTGACTACATATGA 57.629 33.333 10.38 0.00 35.39 2.15
2441 5608 9.725019 AGATTTCAACAAGTGACTACATATGAA 57.275 29.630 10.38 0.00 35.39 2.57
2442 5609 9.979270 GATTTCAACAAGTGACTACATATGAAG 57.021 33.333 10.38 0.00 35.39 3.02
2443 5610 6.968131 TCAACAAGTGACTACATATGAAGC 57.032 37.500 10.38 0.00 0.00 3.86
2444 5611 6.463360 TCAACAAGTGACTACATATGAAGCA 58.537 36.000 10.38 0.00 0.00 3.91
2445 5612 6.934083 TCAACAAGTGACTACATATGAAGCAA 59.066 34.615 10.38 0.00 0.00 3.91
2446 5613 7.443879 TCAACAAGTGACTACATATGAAGCAAA 59.556 33.333 10.38 0.00 0.00 3.68
2447 5614 7.744087 ACAAGTGACTACATATGAAGCAAAA 57.256 32.000 10.38 0.00 0.00 2.44
2448 5615 8.340618 ACAAGTGACTACATATGAAGCAAAAT 57.659 30.769 10.38 0.00 0.00 1.82
2449 5616 8.239314 ACAAGTGACTACATATGAAGCAAAATG 58.761 33.333 10.38 3.10 0.00 2.32
2450 5617 8.453320 CAAGTGACTACATATGAAGCAAAATGA 58.547 33.333 10.38 0.00 0.00 2.57
2451 5618 8.206325 AGTGACTACATATGAAGCAAAATGAG 57.794 34.615 10.38 0.00 0.00 2.90
2452 5619 7.826252 AGTGACTACATATGAAGCAAAATGAGT 59.174 33.333 10.38 0.00 0.00 3.41
2453 5620 9.098355 GTGACTACATATGAAGCAAAATGAGTA 57.902 33.333 10.38 0.00 0.00 2.59
2454 5621 9.665719 TGACTACATATGAAGCAAAATGAGTAA 57.334 29.630 10.38 0.00 0.00 2.24
2463 5630 8.621532 TGAAGCAAAATGAGTAAATCTACACT 57.378 30.769 0.00 0.00 0.00 3.55
2464 5631 8.721478 TGAAGCAAAATGAGTAAATCTACACTC 58.279 33.333 0.00 0.00 41.31 3.51
2465 5632 8.854614 AAGCAAAATGAGTAAATCTACACTCT 57.145 30.769 3.65 0.00 41.46 3.24
2466 5633 9.944376 AAGCAAAATGAGTAAATCTACACTCTA 57.056 29.630 3.65 0.00 41.46 2.43
2467 5634 9.944376 AGCAAAATGAGTAAATCTACACTCTAA 57.056 29.630 3.65 0.00 41.46 2.10
2511 5678 9.906660 TTGTATTTGTAGTCCATTTGAAATGTC 57.093 29.630 15.93 9.10 0.00 3.06
2512 5679 9.295825 TGTATTTGTAGTCCATTTGAAATGTCT 57.704 29.630 15.93 14.81 0.00 3.41
2515 5682 9.739276 ATTTGTAGTCCATTTGAAATGTCTAGA 57.261 29.630 15.93 12.79 0.00 2.43
2516 5683 9.567776 TTTGTAGTCCATTTGAAATGTCTAGAA 57.432 29.630 15.93 16.70 0.00 2.10
2517 5684 9.567776 TTGTAGTCCATTTGAAATGTCTAGAAA 57.432 29.630 15.93 11.59 0.00 2.52
2518 5685 9.219603 TGTAGTCCATTTGAAATGTCTAGAAAG 57.780 33.333 15.93 0.00 0.00 2.62
2519 5686 9.436957 GTAGTCCATTTGAAATGTCTAGAAAGA 57.563 33.333 15.93 1.84 0.00 2.52
2539 5706 8.082242 AGAAAGACAAATATTTGAAAACGGAGG 58.918 33.333 30.18 4.51 40.55 4.30
2540 5707 6.267496 AGACAAATATTTGAAAACGGAGGG 57.733 37.500 30.18 4.03 40.55 4.30
2541 5708 6.007703 AGACAAATATTTGAAAACGGAGGGA 58.992 36.000 30.18 0.00 40.55 4.20
2550 5717 3.760684 TGAAAACGGAGGGAGTAGTAGTC 59.239 47.826 0.00 0.00 0.00 2.59
2553 5720 3.836365 ACGGAGGGAGTAGTAGTCTAC 57.164 52.381 1.39 1.39 44.79 2.59
2592 5759 0.388659 ATGACTCTGCCTCATCGAGC 59.611 55.000 0.00 0.00 0.00 5.03
2620 5787 7.344441 CGATCAACGCACAGATGATAAAAATA 58.656 34.615 0.00 0.00 41.60 1.40
2705 5874 4.832248 TCAAAATATCTGTCGGAGCAAGT 58.168 39.130 0.00 0.00 0.00 3.16
2760 5929 3.332034 ACTCGTTGGCCTGTATTTACAC 58.668 45.455 3.32 0.00 31.93 2.90
2803 5972 8.966868 TGAACCAAAGAGAAAAATGAACTAACT 58.033 29.630 0.00 0.00 0.00 2.24
2878 6047 1.149101 AAGGAGAAGTTGAGGCCCAA 58.851 50.000 0.00 0.00 0.00 4.12
2895 6064 0.676466 CAAAGGTGCCGGATGTAGCA 60.676 55.000 5.05 0.00 36.44 3.49
2915 6084 4.493547 GCACTTTTGCCATTTAGCACATA 58.506 39.130 0.00 0.00 43.97 2.29
2916 6085 4.327087 GCACTTTTGCCATTTAGCACATAC 59.673 41.667 0.00 0.00 43.97 2.39
2917 6086 4.558470 CACTTTTGCCATTTAGCACATACG 59.442 41.667 0.00 0.00 43.97 3.06
2918 6087 4.217550 ACTTTTGCCATTTAGCACATACGT 59.782 37.500 0.00 0.00 43.97 3.57
2919 6088 5.413213 ACTTTTGCCATTTAGCACATACGTA 59.587 36.000 0.00 0.00 43.97 3.57
2920 6089 6.094881 ACTTTTGCCATTTAGCACATACGTAT 59.905 34.615 1.14 1.14 43.97 3.06
2921 6090 7.281324 ACTTTTGCCATTTAGCACATACGTATA 59.719 33.333 7.96 0.00 43.97 1.47
2922 6091 6.533819 TTGCCATTTAGCACATACGTATAC 57.466 37.500 7.96 1.08 43.97 1.47
2923 6092 5.849510 TGCCATTTAGCACATACGTATACT 58.150 37.500 7.96 8.72 38.00 2.12
2924 6093 5.924254 TGCCATTTAGCACATACGTATACTC 59.076 40.000 7.96 0.13 38.00 2.59
2925 6094 6.157211 GCCATTTAGCACATACGTATACTCT 58.843 40.000 7.96 7.66 0.00 3.24
2926 6095 6.308282 GCCATTTAGCACATACGTATACTCTC 59.692 42.308 7.96 0.00 0.00 3.20
2927 6096 7.368059 CCATTTAGCACATACGTATACTCTCA 58.632 38.462 7.96 0.00 0.00 3.27
2928 6097 7.865889 CCATTTAGCACATACGTATACTCTCAA 59.134 37.037 7.96 3.97 0.00 3.02
2929 6098 9.244799 CATTTAGCACATACGTATACTCTCAAA 57.755 33.333 7.96 5.50 0.00 2.69
2930 6099 9.811995 ATTTAGCACATACGTATACTCTCAAAA 57.188 29.630 7.96 4.63 0.00 2.44
2931 6100 9.642327 TTTAGCACATACGTATACTCTCAAAAA 57.358 29.630 7.96 1.56 0.00 1.94
2985 6154 6.215636 ACCTAAGTTAGACCCTGAATCATGTT 59.784 38.462 11.66 0.00 0.00 2.71
2999 6168 5.647658 TGAATCATGTTAACATCTGTGTCCC 59.352 40.000 18.25 3.87 37.67 4.46
3099 6268 6.208797 TGAAGTATCTCCGAAGAAAGAGTCAA 59.791 38.462 0.00 0.00 34.49 3.18
3102 6271 2.894126 TCTCCGAAGAAAGAGTCAAGCT 59.106 45.455 0.00 0.00 0.00 3.74
3106 6275 3.056465 CCGAAGAAAGAGTCAAGCTAGGT 60.056 47.826 0.00 0.00 0.00 3.08
3125 6294 2.665185 AGCGCCGACTGGAACAAC 60.665 61.111 2.29 0.00 38.70 3.32
3126 6295 2.970324 GCGCCGACTGGAACAACA 60.970 61.111 0.00 0.00 38.70 3.33
3127 6296 2.539338 GCGCCGACTGGAACAACAA 61.539 57.895 0.00 0.00 38.70 2.83
3128 6297 1.278637 CGCCGACTGGAACAACAAC 59.721 57.895 0.00 0.00 38.70 3.32
3129 6298 1.433053 CGCCGACTGGAACAACAACA 61.433 55.000 0.00 0.00 38.70 3.33
3130 6299 0.736053 GCCGACTGGAACAACAACAA 59.264 50.000 0.00 0.00 38.70 2.83
3131 6300 1.133407 GCCGACTGGAACAACAACAAA 59.867 47.619 0.00 0.00 38.70 2.83
3132 6301 2.794631 GCCGACTGGAACAACAACAAAG 60.795 50.000 0.00 0.00 38.70 2.77
3133 6302 2.680841 CCGACTGGAACAACAACAAAGA 59.319 45.455 0.00 0.00 38.70 2.52
3134 6303 3.315191 CCGACTGGAACAACAACAAAGAT 59.685 43.478 0.00 0.00 38.70 2.40
3135 6304 4.282068 CGACTGGAACAACAACAAAGATG 58.718 43.478 0.00 0.00 38.70 2.90
3136 6305 4.035091 CGACTGGAACAACAACAAAGATGA 59.965 41.667 0.00 0.00 38.70 2.92
3137 6306 5.248870 ACTGGAACAACAACAAAGATGAC 57.751 39.130 0.00 0.00 38.70 3.06
3138 6307 4.704540 ACTGGAACAACAACAAAGATGACA 59.295 37.500 0.00 0.00 38.70 3.58
3139 6308 5.360714 ACTGGAACAACAACAAAGATGACAT 59.639 36.000 0.00 0.00 38.70 3.06
3140 6309 5.590145 TGGAACAACAACAAAGATGACATG 58.410 37.500 0.00 0.00 31.92 3.21
3141 6310 5.359292 TGGAACAACAACAAAGATGACATGA 59.641 36.000 0.00 0.00 31.92 3.07
3142 6311 6.040729 TGGAACAACAACAAAGATGACATGAT 59.959 34.615 0.00 0.00 31.92 2.45
3143 6312 6.364165 GGAACAACAACAAAGATGACATGATG 59.636 38.462 0.00 0.00 0.00 3.07
3144 6313 6.638096 ACAACAACAAAGATGACATGATGA 57.362 33.333 0.00 0.00 0.00 2.92
3145 6314 7.041635 ACAACAACAAAGATGACATGATGAA 57.958 32.000 0.00 0.00 0.00 2.57
3146 6315 7.143340 ACAACAACAAAGATGACATGATGAAG 58.857 34.615 0.00 0.00 0.00 3.02
3147 6316 6.889301 ACAACAAAGATGACATGATGAAGT 57.111 33.333 0.00 0.00 0.00 3.01
3148 6317 7.984422 ACAACAAAGATGACATGATGAAGTA 57.016 32.000 0.00 0.00 0.00 2.24
3149 6318 7.810658 ACAACAAAGATGACATGATGAAGTAC 58.189 34.615 0.00 0.00 0.00 2.73
3150 6319 7.445096 ACAACAAAGATGACATGATGAAGTACA 59.555 33.333 0.00 0.00 0.00 2.90
3151 6320 7.984422 ACAAAGATGACATGATGAAGTACAA 57.016 32.000 0.00 0.00 0.00 2.41
3152 6321 8.394971 ACAAAGATGACATGATGAAGTACAAA 57.605 30.769 0.00 0.00 0.00 2.83
3153 6322 8.849168 ACAAAGATGACATGATGAAGTACAAAA 58.151 29.630 0.00 0.00 0.00 2.44
3154 6323 9.121517 CAAAGATGACATGATGAAGTACAAAAC 57.878 33.333 0.00 0.00 0.00 2.43
3155 6324 7.984422 AGATGACATGATGAAGTACAAAACA 57.016 32.000 0.00 0.00 0.00 2.83
3156 6325 7.810658 AGATGACATGATGAAGTACAAAACAC 58.189 34.615 0.00 0.00 0.00 3.32
3157 6326 6.934048 TGACATGATGAAGTACAAAACACA 57.066 33.333 0.00 0.00 0.00 3.72
3158 6327 7.509141 TGACATGATGAAGTACAAAACACAT 57.491 32.000 0.00 0.00 32.64 3.21
3159 6328 7.361894 TGACATGATGAAGTACAAAACACATG 58.638 34.615 0.00 0.00 38.59 3.21
3160 6329 7.013178 TGACATGATGAAGTACAAAACACATGT 59.987 33.333 17.51 17.51 44.97 3.21
3161 6330 8.389779 ACATGATGAAGTACAAAACACATGTA 57.610 30.769 16.63 0.00 42.09 2.29
3162 6331 8.506437 ACATGATGAAGTACAAAACACATGTAG 58.494 33.333 16.63 0.00 42.09 2.74
3163 6332 8.720562 CATGATGAAGTACAAAACACATGTAGA 58.279 33.333 0.00 0.00 34.14 2.59
3164 6333 8.310406 TGATGAAGTACAAAACACATGTAGAG 57.690 34.615 0.00 0.00 34.14 2.43
3165 6334 6.539649 TGAAGTACAAAACACATGTAGAGC 57.460 37.500 0.00 0.00 34.14 4.09
3166 6335 6.288294 TGAAGTACAAAACACATGTAGAGCT 58.712 36.000 0.00 0.00 34.14 4.09
3167 6336 6.423905 TGAAGTACAAAACACATGTAGAGCTC 59.576 38.462 5.27 5.27 34.14 4.09
3168 6337 5.853936 AGTACAAAACACATGTAGAGCTCA 58.146 37.500 17.77 0.00 34.14 4.26
3169 6338 6.467677 AGTACAAAACACATGTAGAGCTCAT 58.532 36.000 17.77 3.63 34.14 2.90
3170 6339 5.618056 ACAAAACACATGTAGAGCTCATG 57.382 39.130 17.77 14.03 45.41 3.07
3171 6340 4.083110 ACAAAACACATGTAGAGCTCATGC 60.083 41.667 17.77 5.87 44.26 4.06
3172 6341 7.020040 TACAAAACACATGTAGAGCTCATGCT 61.020 38.462 17.77 0.00 44.26 3.79
3173 6342 8.742440 TACAAAACACATGTAGAGCTCATGCTC 61.742 40.741 17.77 9.73 46.49 4.26
3184 6353 3.539431 GCTCATGCTCATAAGATGCAC 57.461 47.619 0.00 0.00 39.63 4.57
3185 6354 2.876550 GCTCATGCTCATAAGATGCACA 59.123 45.455 0.00 0.00 39.63 4.57
3186 6355 3.303857 GCTCATGCTCATAAGATGCACAC 60.304 47.826 0.00 0.00 39.63 3.82
3187 6356 3.875134 CTCATGCTCATAAGATGCACACA 59.125 43.478 0.00 0.00 39.63 3.72
3188 6357 4.457466 TCATGCTCATAAGATGCACACAT 58.543 39.130 0.00 0.00 39.63 3.21
3189 6358 8.687988 GCTCATGCTCATAAGATGCACACATC 62.688 46.154 0.00 0.00 43.46 3.06
3199 6368 2.884894 TGCACACATCAAATGCAACA 57.115 40.000 0.00 0.00 45.96 3.33
3200 6369 3.175109 TGCACACATCAAATGCAACAA 57.825 38.095 0.00 0.00 45.96 2.83
3201 6370 3.528532 TGCACACATCAAATGCAACAAA 58.471 36.364 0.00 0.00 45.96 2.83
3202 6371 3.937079 TGCACACATCAAATGCAACAAAA 59.063 34.783 0.00 0.00 45.96 2.44
3203 6372 4.393990 TGCACACATCAAATGCAACAAAAA 59.606 33.333 0.00 0.00 45.96 1.94
3204 6373 5.066117 TGCACACATCAAATGCAACAAAAAT 59.934 32.000 0.00 0.00 45.96 1.82
3205 6374 6.259387 TGCACACATCAAATGCAACAAAAATA 59.741 30.769 0.00 0.00 45.96 1.40
3206 6375 7.130917 GCACACATCAAATGCAACAAAAATAA 58.869 30.769 0.00 0.00 39.23 1.40
3207 6376 7.111870 GCACACATCAAATGCAACAAAAATAAC 59.888 33.333 0.00 0.00 39.23 1.89
3208 6377 8.121086 CACACATCAAATGCAACAAAAATAACA 58.879 29.630 0.00 0.00 0.00 2.41
3209 6378 8.671921 ACACATCAAATGCAACAAAAATAACAA 58.328 25.926 0.00 0.00 0.00 2.83
3210 6379 9.499585 CACATCAAATGCAACAAAAATAACAAA 57.500 25.926 0.00 0.00 0.00 2.83
3219 6388 9.107177 TGCAACAAAAATAACAAATCATCAAGT 57.893 25.926 0.00 0.00 0.00 3.16
3220 6389 9.934190 GCAACAAAAATAACAAATCATCAAGTT 57.066 25.926 0.00 0.00 0.00 2.66
3234 6403 9.846248 AAATCATCAAGTTATAACAGTTTCAGC 57.154 29.630 17.65 0.00 0.00 4.26
3235 6404 7.977789 TCATCAAGTTATAACAGTTTCAGCA 57.022 32.000 17.65 0.00 0.00 4.41
3236 6405 8.032952 TCATCAAGTTATAACAGTTTCAGCAG 57.967 34.615 17.65 0.00 0.00 4.24
3237 6406 7.877612 TCATCAAGTTATAACAGTTTCAGCAGA 59.122 33.333 17.65 0.00 0.00 4.26
3238 6407 8.671921 CATCAAGTTATAACAGTTTCAGCAGAT 58.328 33.333 17.65 0.65 0.00 2.90
3239 6408 8.621532 TCAAGTTATAACAGTTTCAGCAGATT 57.378 30.769 17.65 0.00 0.00 2.40
3240 6409 9.719355 TCAAGTTATAACAGTTTCAGCAGATTA 57.281 29.630 17.65 0.00 0.00 1.75
3243 6412 9.502091 AGTTATAACAGTTTCAGCAGATTAACA 57.498 29.630 17.65 0.00 0.00 2.41
3246 6415 6.882610 AACAGTTTCAGCAGATTAACATCA 57.117 33.333 0.00 0.00 0.00 3.07
3247 6416 7.458409 AACAGTTTCAGCAGATTAACATCAT 57.542 32.000 0.00 0.00 0.00 2.45
3248 6417 8.565896 AACAGTTTCAGCAGATTAACATCATA 57.434 30.769 0.00 0.00 0.00 2.15
3249 6418 8.743085 ACAGTTTCAGCAGATTAACATCATAT 57.257 30.769 0.00 0.00 0.00 1.78
3250 6419 9.836864 ACAGTTTCAGCAGATTAACATCATATA 57.163 29.630 0.00 0.00 0.00 0.86
3256 6425 9.866798 TCAGCAGATTAACATCATATATCACTC 57.133 33.333 0.00 0.00 0.00 3.51
3257 6426 9.872721 CAGCAGATTAACATCATATATCACTCT 57.127 33.333 0.00 0.00 0.00 3.24
3265 6434 8.913487 AACATCATATATCACTCTTGCAATGA 57.087 30.769 0.00 0.82 0.00 2.57
3266 6435 9.516546 AACATCATATATCACTCTTGCAATGAT 57.483 29.630 16.12 16.12 36.95 2.45
3268 6437 9.162764 CATCATATATCACTCTTGCAATGATGA 57.837 33.333 20.02 14.70 46.29 2.92
3269 6438 9.907229 ATCATATATCACTCTTGCAATGATGAT 57.093 29.630 19.60 18.82 34.86 2.45
3270 6439 9.734984 TCATATATCACTCTTGCAATGATGATT 57.265 29.630 19.60 9.90 34.86 2.57
3273 6442 6.879276 ATCACTCTTGCAATGATGATTAGG 57.121 37.500 12.16 0.00 31.84 2.69
3274 6443 5.128205 TCACTCTTGCAATGATGATTAGGG 58.872 41.667 0.00 0.00 0.00 3.53
3275 6444 3.887716 ACTCTTGCAATGATGATTAGGGC 59.112 43.478 0.00 0.00 0.00 5.19
3276 6445 3.887110 CTCTTGCAATGATGATTAGGGCA 59.113 43.478 0.00 0.00 0.00 5.36
3277 6446 4.476297 TCTTGCAATGATGATTAGGGCAT 58.524 39.130 0.00 0.00 0.00 4.40
3278 6447 4.897076 TCTTGCAATGATGATTAGGGCATT 59.103 37.500 0.00 0.00 0.00 3.56
3279 6448 6.069994 TCTTGCAATGATGATTAGGGCATTA 58.930 36.000 0.00 0.00 30.45 1.90
3280 6449 6.550481 TCTTGCAATGATGATTAGGGCATTAA 59.450 34.615 0.00 0.00 30.45 1.40
3281 6450 6.335471 TGCAATGATGATTAGGGCATTAAG 57.665 37.500 0.00 0.00 30.45 1.85
3282 6451 6.069994 TGCAATGATGATTAGGGCATTAAGA 58.930 36.000 0.00 0.00 30.45 2.10
3283 6452 6.722590 TGCAATGATGATTAGGGCATTAAGAT 59.277 34.615 0.00 0.00 30.45 2.40
3284 6453 7.033791 GCAATGATGATTAGGGCATTAAGATG 58.966 38.462 0.00 0.00 36.32 2.90
3285 6454 7.309621 GCAATGATGATTAGGGCATTAAGATGT 60.310 37.037 0.00 0.00 35.63 3.06
3286 6455 9.234827 CAATGATGATTAGGGCATTAAGATGTA 57.765 33.333 0.00 0.00 35.63 2.29
3287 6456 8.798859 ATGATGATTAGGGCATTAAGATGTAC 57.201 34.615 0.00 0.00 35.63 2.90
3288 6457 7.977818 TGATGATTAGGGCATTAAGATGTACT 58.022 34.615 0.00 0.00 35.63 2.73
3289 6458 8.097038 TGATGATTAGGGCATTAAGATGTACTC 58.903 37.037 0.00 0.00 35.63 2.59
3290 6459 7.373617 TGATTAGGGCATTAAGATGTACTCA 57.626 36.000 0.00 0.00 35.63 3.41
3291 6460 7.801104 TGATTAGGGCATTAAGATGTACTCAA 58.199 34.615 0.00 0.00 35.63 3.02
3292 6461 8.271458 TGATTAGGGCATTAAGATGTACTCAAA 58.729 33.333 0.00 0.00 35.63 2.69
3293 6462 7.859325 TTAGGGCATTAAGATGTACTCAAAC 57.141 36.000 0.00 0.00 35.63 2.93
3294 6463 5.815581 AGGGCATTAAGATGTACTCAAACA 58.184 37.500 0.00 0.00 35.63 2.83
3295 6464 6.245408 AGGGCATTAAGATGTACTCAAACAA 58.755 36.000 0.00 0.00 35.63 2.83
3296 6465 6.375455 AGGGCATTAAGATGTACTCAAACAAG 59.625 38.462 0.00 0.00 35.63 3.16
3297 6466 6.030228 GGCATTAAGATGTACTCAAACAAGC 58.970 40.000 0.00 0.00 35.63 4.01
3298 6467 6.349280 GGCATTAAGATGTACTCAAACAAGCA 60.349 38.462 0.00 0.00 35.63 3.91
3299 6468 7.253422 GCATTAAGATGTACTCAAACAAGCAT 58.747 34.615 0.00 0.00 35.63 3.79
3300 6469 7.219535 GCATTAAGATGTACTCAAACAAGCATG 59.780 37.037 0.00 0.00 35.63 4.06
3301 6470 5.633830 AAGATGTACTCAAACAAGCATGG 57.366 39.130 0.00 0.00 32.02 3.66
3302 6471 3.441572 AGATGTACTCAAACAAGCATGGC 59.558 43.478 0.00 0.00 32.02 4.40
3303 6472 2.580962 TGTACTCAAACAAGCATGGCA 58.419 42.857 0.00 0.00 0.00 4.92
3304 6473 2.293122 TGTACTCAAACAAGCATGGCAC 59.707 45.455 0.00 0.00 0.00 5.01
3305 6474 5.527443 ATGTACTCAAACAAGCATGGCACA 61.527 41.667 0.00 0.00 36.08 4.57
3306 6475 7.283058 ATGTACTCAAACAAGCATGGCACAG 62.283 44.000 0.00 0.00 35.28 3.66
3319 6488 2.596346 TGGCACAGTGGAATGAAATGT 58.404 42.857 1.84 0.00 0.00 2.71
3320 6489 3.760738 TGGCACAGTGGAATGAAATGTA 58.239 40.909 1.84 0.00 0.00 2.29
3321 6490 3.758023 TGGCACAGTGGAATGAAATGTAG 59.242 43.478 1.84 0.00 0.00 2.74
3322 6491 4.009675 GGCACAGTGGAATGAAATGTAGA 58.990 43.478 1.84 0.00 0.00 2.59
3323 6492 4.095483 GGCACAGTGGAATGAAATGTAGAG 59.905 45.833 1.84 0.00 0.00 2.43
3324 6493 4.437930 GCACAGTGGAATGAAATGTAGAGC 60.438 45.833 1.84 0.00 0.00 4.09
3325 6494 4.696877 CACAGTGGAATGAAATGTAGAGCA 59.303 41.667 0.00 0.00 0.00 4.26
3326 6495 5.356190 CACAGTGGAATGAAATGTAGAGCAT 59.644 40.000 0.00 0.00 40.03 3.79
3327 6496 5.587844 ACAGTGGAATGAAATGTAGAGCATC 59.412 40.000 0.00 0.00 36.67 3.91
3342 6511 4.410492 GAGCATCTCACAACGAACATTT 57.590 40.909 0.00 0.00 0.00 2.32
3343 6512 4.787598 GAGCATCTCACAACGAACATTTT 58.212 39.130 0.00 0.00 0.00 1.82
3344 6513 4.539870 AGCATCTCACAACGAACATTTTG 58.460 39.130 0.00 0.00 0.00 2.44
3345 6514 4.275689 AGCATCTCACAACGAACATTTTGA 59.724 37.500 0.00 0.00 0.00 2.69
3346 6515 4.379793 GCATCTCACAACGAACATTTTGAC 59.620 41.667 0.00 0.00 0.00 3.18
3347 6516 5.509771 CATCTCACAACGAACATTTTGACA 58.490 37.500 0.00 0.00 0.00 3.58
3348 6517 5.749596 TCTCACAACGAACATTTTGACAT 57.250 34.783 0.00 0.00 0.00 3.06
3349 6518 6.852858 TCTCACAACGAACATTTTGACATA 57.147 33.333 0.00 0.00 0.00 2.29
3350 6519 7.433708 TCTCACAACGAACATTTTGACATAT 57.566 32.000 0.00 0.00 0.00 1.78
3351 6520 7.518161 TCTCACAACGAACATTTTGACATATC 58.482 34.615 0.00 0.00 0.00 1.63
3352 6521 7.172361 TCTCACAACGAACATTTTGACATATCA 59.828 33.333 0.00 0.00 0.00 2.15
3353 6522 7.075121 TCACAACGAACATTTTGACATATCAC 58.925 34.615 0.00 0.00 33.38 3.06
3354 6523 6.855403 CACAACGAACATTTTGACATATCACA 59.145 34.615 0.00 0.00 33.38 3.58
3355 6524 7.538334 CACAACGAACATTTTGACATATCACAT 59.462 33.333 0.00 0.00 33.38 3.21
3356 6525 7.538334 ACAACGAACATTTTGACATATCACATG 59.462 33.333 0.00 0.00 33.38 3.21
3357 6526 6.029607 ACGAACATTTTGACATATCACATGC 58.970 36.000 0.00 0.00 33.38 4.06
3358 6527 6.028987 CGAACATTTTGACATATCACATGCA 58.971 36.000 0.00 0.00 33.38 3.96
3359 6528 6.021232 CGAACATTTTGACATATCACATGCAC 60.021 38.462 0.00 0.00 33.38 4.57
3360 6529 5.334319 ACATTTTGACATATCACATGCACG 58.666 37.500 0.00 0.00 33.38 5.34
3361 6530 5.123661 ACATTTTGACATATCACATGCACGA 59.876 36.000 0.00 0.00 33.38 4.35
3362 6531 5.619625 TTTTGACATATCACATGCACGAA 57.380 34.783 0.00 0.00 33.38 3.85
3363 6532 5.619625 TTTGACATATCACATGCACGAAA 57.380 34.783 0.00 0.00 33.38 3.46
3364 6533 4.598406 TGACATATCACATGCACGAAAC 57.402 40.909 0.00 0.00 0.00 2.78
3365 6534 3.061965 TGACATATCACATGCACGAAACG 59.938 43.478 0.00 0.00 0.00 3.60
3366 6535 2.351418 ACATATCACATGCACGAAACGG 59.649 45.455 0.00 0.00 0.00 4.44
3367 6536 2.371910 TATCACATGCACGAAACGGA 57.628 45.000 0.00 0.00 0.00 4.69
3368 6537 1.078709 ATCACATGCACGAAACGGAG 58.921 50.000 0.00 0.00 0.00 4.63
3370 6539 1.000052 TCACATGCACGAAACGGAGTA 60.000 47.619 0.00 0.00 45.00 2.59
3371 6540 1.390123 CACATGCACGAAACGGAGTAG 59.610 52.381 0.00 0.00 45.00 2.57
3372 6541 1.000506 ACATGCACGAAACGGAGTAGT 59.999 47.619 0.00 0.00 45.00 2.73
3373 6542 2.229543 ACATGCACGAAACGGAGTAGTA 59.770 45.455 0.00 0.00 45.00 1.82
3374 6543 3.119245 ACATGCACGAAACGGAGTAGTAT 60.119 43.478 0.00 0.00 45.00 2.12
3375 6544 2.871133 TGCACGAAACGGAGTAGTATG 58.129 47.619 0.00 0.00 45.00 2.39
3376 6545 1.587034 GCACGAAACGGAGTAGTATGC 59.413 52.381 0.00 0.00 45.00 3.14
3377 6546 2.871133 CACGAAACGGAGTAGTATGCA 58.129 47.619 0.00 0.00 45.00 3.96
3378 6547 3.444916 CACGAAACGGAGTAGTATGCAT 58.555 45.455 3.79 3.79 45.00 3.96
3379 6548 3.242944 CACGAAACGGAGTAGTATGCATG 59.757 47.826 10.16 0.00 45.00 4.06
3380 6549 2.794910 CGAAACGGAGTAGTATGCATGG 59.205 50.000 10.16 0.00 45.00 3.66
3381 6550 3.490249 CGAAACGGAGTAGTATGCATGGA 60.490 47.826 10.16 0.00 45.00 3.41
3382 6551 3.735237 AACGGAGTAGTATGCATGGAG 57.265 47.619 10.16 0.00 45.00 3.86
3383 6552 2.667470 ACGGAGTAGTATGCATGGAGT 58.333 47.619 10.16 0.00 41.94 3.85
3384 6553 3.031736 ACGGAGTAGTATGCATGGAGTT 58.968 45.455 10.16 0.00 41.94 3.01
3385 6554 4.212716 ACGGAGTAGTATGCATGGAGTTA 58.787 43.478 10.16 0.00 41.94 2.24
3386 6555 4.833380 ACGGAGTAGTATGCATGGAGTTAT 59.167 41.667 10.16 0.00 41.94 1.89
3387 6556 5.164233 CGGAGTAGTATGCATGGAGTTATG 58.836 45.833 10.16 0.00 0.00 1.90
3388 6557 5.048013 CGGAGTAGTATGCATGGAGTTATGA 60.048 44.000 10.16 0.00 0.00 2.15
3389 6558 6.350528 CGGAGTAGTATGCATGGAGTTATGAT 60.351 42.308 10.16 0.00 0.00 2.45
3390 6559 6.815641 GGAGTAGTATGCATGGAGTTATGATG 59.184 42.308 10.16 0.00 0.00 3.07
3391 6560 6.169094 AGTAGTATGCATGGAGTTATGATGC 58.831 40.000 10.16 0.00 42.38 3.91
3392 6561 3.999001 AGTATGCATGGAGTTATGATGCG 59.001 43.478 10.16 0.00 44.52 4.73
3393 6562 2.618442 TGCATGGAGTTATGATGCGA 57.382 45.000 0.00 0.00 44.52 5.10
3394 6563 3.130280 TGCATGGAGTTATGATGCGAT 57.870 42.857 0.00 0.00 44.52 4.58
3395 6564 4.270245 TGCATGGAGTTATGATGCGATA 57.730 40.909 0.00 0.00 44.52 2.92
3396 6565 4.640364 TGCATGGAGTTATGATGCGATAA 58.360 39.130 0.00 0.00 44.52 1.75
3397 6566 5.062528 TGCATGGAGTTATGATGCGATAAA 58.937 37.500 0.00 0.00 44.52 1.40
3398 6567 5.049474 TGCATGGAGTTATGATGCGATAAAC 60.049 40.000 0.00 0.00 44.52 2.01
3399 6568 5.049474 GCATGGAGTTATGATGCGATAAACA 60.049 40.000 0.00 0.00 33.67 2.83
3400 6569 6.596703 CATGGAGTTATGATGCGATAAACAG 58.403 40.000 0.00 0.00 0.00 3.16
3401 6570 5.056480 TGGAGTTATGATGCGATAAACAGG 58.944 41.667 0.00 0.00 0.00 4.00
3402 6571 5.163353 TGGAGTTATGATGCGATAAACAGGA 60.163 40.000 0.00 0.00 0.00 3.86
3403 6572 5.406780 GGAGTTATGATGCGATAAACAGGAG 59.593 44.000 0.00 0.00 0.00 3.69
3404 6573 4.752101 AGTTATGATGCGATAAACAGGAGC 59.248 41.667 0.00 0.00 0.00 4.70
3405 6574 2.988010 TGATGCGATAAACAGGAGCT 57.012 45.000 0.00 0.00 0.00 4.09
3406 6575 4.607293 ATGATGCGATAAACAGGAGCTA 57.393 40.909 0.00 0.00 0.00 3.32
3407 6576 4.400529 TGATGCGATAAACAGGAGCTAA 57.599 40.909 0.00 0.00 0.00 3.09
3408 6577 4.765273 TGATGCGATAAACAGGAGCTAAA 58.235 39.130 0.00 0.00 0.00 1.85
3409 6578 5.182487 TGATGCGATAAACAGGAGCTAAAA 58.818 37.500 0.00 0.00 0.00 1.52
3410 6579 5.645929 TGATGCGATAAACAGGAGCTAAAAA 59.354 36.000 0.00 0.00 0.00 1.94
3411 6580 6.318648 TGATGCGATAAACAGGAGCTAAAAAT 59.681 34.615 0.00 0.00 0.00 1.82
3412 6581 7.497579 TGATGCGATAAACAGGAGCTAAAAATA 59.502 33.333 0.00 0.00 0.00 1.40
3413 6582 7.801716 TGCGATAAACAGGAGCTAAAAATAT 57.198 32.000 0.00 0.00 0.00 1.28
3414 6583 7.639039 TGCGATAAACAGGAGCTAAAAATATG 58.361 34.615 0.00 0.00 0.00 1.78
3415 6584 6.578919 GCGATAAACAGGAGCTAAAAATATGC 59.421 38.462 0.00 0.00 0.00 3.14
3416 6585 7.639039 CGATAAACAGGAGCTAAAAATATGCA 58.361 34.615 0.00 0.00 0.00 3.96
3417 6586 8.128582 CGATAAACAGGAGCTAAAAATATGCAA 58.871 33.333 0.00 0.00 0.00 4.08
3467 6636 9.002600 GCATGTAGTTTCATATTATCATGTGGA 57.997 33.333 0.00 0.00 35.40 4.02
3480 6649 7.537596 TTATCATGTGGAATCCTTGTTTTGT 57.462 32.000 0.00 0.00 0.00 2.83
3510 6680 9.662545 GTTTGCTTAATGTTTGTATGCATTTTT 57.337 25.926 3.54 0.00 36.75 1.94
3561 6731 4.408276 TCATATCTTCTAGGCCGTAGCTT 58.592 43.478 0.00 0.00 39.73 3.74
3575 6745 4.270325 GCCGTAGCTTCGAACTAAATGAAT 59.730 41.667 14.87 0.00 35.50 2.57
3629 6800 4.273148 TCCTCTTGGTGCTCTTTAACTC 57.727 45.455 0.00 0.00 34.23 3.01
3674 6845 3.743521 TGTTTGTTCAGATCTGGACCAG 58.256 45.455 27.87 15.99 38.31 4.00
3705 6876 1.691976 TGCATATGAGGACTTACCGGG 59.308 52.381 6.32 0.00 44.74 5.73
3724 6895 5.109903 CCGGGTTTGTTTTATGTTGTTTCA 58.890 37.500 0.00 0.00 0.00 2.69
3749 6920 6.437162 AGGCCTCATTTAAACTTGCTTTGATA 59.563 34.615 0.00 0.00 0.00 2.15
3768 6939 9.409312 CTTTGATATGTTGTTCTTGTTTGCATA 57.591 29.630 0.00 0.00 0.00 3.14
3810 6982 5.450137 GCTTCATGTAGCTTCTTCATGCATT 60.450 40.000 16.33 0.00 38.53 3.56
3823 6995 5.185442 TCTTCATGCATTATGCTTGGTTGAA 59.815 36.000 25.65 19.19 45.26 2.69
3855 7028 3.610911 TGTCATGTGTGGTGTGTTTACA 58.389 40.909 0.00 0.00 0.00 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
68 69 1.835494 AAGATCCTCACCTTCGACGA 58.165 50.000 0.00 0.00 0.00 4.20
140 141 5.798125 ACTTCTCTCTCTGACATGTTTCA 57.202 39.130 0.00 0.00 0.00 2.69
452 454 3.965694 ACTAAGTGACCTACCTCATCGT 58.034 45.455 0.00 0.00 0.00 3.73
453 455 4.158025 ACAACTAAGTGACCTACCTCATCG 59.842 45.833 0.00 0.00 0.00 3.84
460 462 3.293311 TCGCACAACTAAGTGACCTAC 57.707 47.619 0.00 0.00 42.05 3.18
1036 1047 2.281761 CACCACCACCAGCCTGAC 60.282 66.667 0.00 0.00 0.00 3.51
1062 1073 0.172803 AACACATACGGCTCGAGTCC 59.827 55.000 12.25 13.22 0.00 3.85
1071 1082 1.423845 GGCTCGCAAACACATACGG 59.576 57.895 0.00 0.00 0.00 4.02
1075 1086 1.577328 CTTCCGGCTCGCAAACACAT 61.577 55.000 0.00 0.00 0.00 3.21
1098 1113 5.300752 CATTCTTTATAGTGACATCCCGCT 58.699 41.667 0.00 0.00 0.00 5.52
1099 1114 4.452455 CCATTCTTTATAGTGACATCCCGC 59.548 45.833 0.00 0.00 0.00 6.13
1102 1117 6.292919 GCGTTCCATTCTTTATAGTGACATCC 60.293 42.308 0.00 0.00 0.00 3.51
1108 1123 3.601586 CGCGCGTTCCATTCTTTATAGTG 60.602 47.826 24.19 0.00 0.00 2.74
1109 1124 2.538449 CGCGCGTTCCATTCTTTATAGT 59.462 45.455 24.19 0.00 0.00 2.12
1132 1151 3.545124 ATTCTCGTGTTGGCCCGCA 62.545 57.895 0.00 0.00 0.00 5.69
1134 1153 1.234615 ACAATTCTCGTGTTGGCCCG 61.235 55.000 0.00 0.00 0.00 6.13
1232 1255 3.718210 GAGGTAGGACGGCAAGCGG 62.718 68.421 0.00 0.00 0.00 5.52
1470 1496 1.264749 CCGGAGTGAGGGTCCATCAA 61.265 60.000 8.02 0.00 33.14 2.57
1546 1573 1.541670 GGTGCACCAGTAAAAGGTCGA 60.542 52.381 31.23 0.00 37.23 4.20
1551 1578 1.241315 CGGGGGTGCACCAGTAAAAG 61.241 60.000 35.78 15.80 42.91 2.27
1553 1580 2.432563 CGGGGGTGCACCAGTAAA 59.567 61.111 35.78 0.00 42.91 2.01
1619 1646 0.249447 CACCTTGCGGATGCTATCGA 60.249 55.000 0.00 0.00 43.34 3.59
1684 1711 3.312828 AGATGCTGACGATATTTCTCGC 58.687 45.455 0.00 0.00 42.35 5.03
1689 1716 5.215903 CGAGTGTAGATGCTGACGATATTT 58.784 41.667 0.00 0.00 0.00 1.40
1694 1721 1.130561 CACGAGTGTAGATGCTGACGA 59.869 52.381 0.00 0.00 0.00 4.20
1872 1899 0.657312 TGCTGCTACGTATGCATTGC 59.343 50.000 3.54 16.65 39.86 3.56
1911 1938 2.713967 TACGCGGTTGTAGCCCTCC 61.714 63.158 12.47 0.00 0.00 4.30
2010 2049 3.462483 TCAAACTGAGACGGCAAGTAA 57.538 42.857 0.00 0.00 0.00 2.24
2043 2085 3.528370 CCTAGGTCCAGGTCGGCG 61.528 72.222 0.00 0.00 33.14 6.46
2088 2130 2.509336 CGTCCCATGAGCGTGTCC 60.509 66.667 0.00 0.00 0.00 4.02
2208 2250 4.344865 GCGTTCCTGGCCCTTGGA 62.345 66.667 0.00 2.12 0.00 3.53
2371 5538 1.669779 CGGAGGGAGTACGAACTAGTG 59.330 57.143 0.00 0.00 35.56 2.74
2372 5539 1.280421 ACGGAGGGAGTACGAACTAGT 59.720 52.381 0.00 0.00 35.56 2.57
2373 5540 2.035530 ACGGAGGGAGTACGAACTAG 57.964 55.000 0.00 0.00 35.56 2.57
2374 5541 2.026822 AGAACGGAGGGAGTACGAACTA 60.027 50.000 0.00 0.00 35.56 2.24
2375 5542 1.172175 GAACGGAGGGAGTACGAACT 58.828 55.000 0.00 0.00 39.21 3.01
2376 5543 1.172175 AGAACGGAGGGAGTACGAAC 58.828 55.000 0.00 0.00 0.00 3.95
2377 5544 1.915141 AAGAACGGAGGGAGTACGAA 58.085 50.000 0.00 0.00 0.00 3.85
2378 5545 2.787473 TAAGAACGGAGGGAGTACGA 57.213 50.000 0.00 0.00 0.00 3.43
2379 5546 3.855689 TTTAAGAACGGAGGGAGTACG 57.144 47.619 0.00 0.00 0.00 3.67
2380 5547 7.767659 ACAAATATTTAAGAACGGAGGGAGTAC 59.232 37.037 0.00 0.00 0.00 2.73
2381 5548 7.854337 ACAAATATTTAAGAACGGAGGGAGTA 58.146 34.615 0.00 0.00 0.00 2.59
2382 5549 6.718294 ACAAATATTTAAGAACGGAGGGAGT 58.282 36.000 0.00 0.00 0.00 3.85
2383 5550 7.048512 AGACAAATATTTAAGAACGGAGGGAG 58.951 38.462 0.00 0.00 0.00 4.30
2384 5551 6.954232 AGACAAATATTTAAGAACGGAGGGA 58.046 36.000 0.00 0.00 0.00 4.20
2385 5552 7.625828 AAGACAAATATTTAAGAACGGAGGG 57.374 36.000 0.00 0.00 0.00 4.30
2386 5553 8.947115 AGAAAGACAAATATTTAAGAACGGAGG 58.053 33.333 0.00 0.00 0.00 4.30
2402 5569 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
2403 5570 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
2404 5571 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
2405 5572 8.491950 GTCACTTGTTGAAATCTCTAGAAAGAC 58.508 37.037 0.00 0.00 35.39 3.01
2406 5573 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
2407 5574 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
2408 5575 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
2409 5576 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
2410 5577 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
2411 5578 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
2413 5580 9.376075 CATATGTAGTCACTTGTTGAAATCTCT 57.624 33.333 0.00 0.00 35.39 3.10
2414 5581 9.371136 TCATATGTAGTCACTTGTTGAAATCTC 57.629 33.333 1.90 0.00 35.39 2.75
2415 5582 9.725019 TTCATATGTAGTCACTTGTTGAAATCT 57.275 29.630 1.90 0.00 35.39 2.40
2416 5583 9.979270 CTTCATATGTAGTCACTTGTTGAAATC 57.021 33.333 1.90 0.00 35.39 2.17
2417 5584 8.454106 GCTTCATATGTAGTCACTTGTTGAAAT 58.546 33.333 10.61 0.00 35.39 2.17
2418 5585 7.443879 TGCTTCATATGTAGTCACTTGTTGAAA 59.556 33.333 10.61 0.00 35.39 2.69
2419 5586 6.934083 TGCTTCATATGTAGTCACTTGTTGAA 59.066 34.615 10.61 0.00 35.39 2.69
2420 5587 6.463360 TGCTTCATATGTAGTCACTTGTTGA 58.537 36.000 10.61 0.00 0.00 3.18
2421 5588 6.726258 TGCTTCATATGTAGTCACTTGTTG 57.274 37.500 10.61 0.00 0.00 3.33
2422 5589 7.744087 TTTGCTTCATATGTAGTCACTTGTT 57.256 32.000 10.61 0.00 0.00 2.83
2423 5590 7.744087 TTTTGCTTCATATGTAGTCACTTGT 57.256 32.000 10.61 0.00 0.00 3.16
2424 5591 8.453320 TCATTTTGCTTCATATGTAGTCACTTG 58.547 33.333 10.61 4.90 0.00 3.16
2425 5592 8.565896 TCATTTTGCTTCATATGTAGTCACTT 57.434 30.769 10.61 0.00 0.00 3.16
2426 5593 7.826252 ACTCATTTTGCTTCATATGTAGTCACT 59.174 33.333 10.61 0.00 0.00 3.41
2427 5594 7.978982 ACTCATTTTGCTTCATATGTAGTCAC 58.021 34.615 10.61 0.00 0.00 3.67
2428 5595 9.665719 TTACTCATTTTGCTTCATATGTAGTCA 57.334 29.630 10.61 6.75 0.00 3.41
2437 5604 9.236006 AGTGTAGATTTACTCATTTTGCTTCAT 57.764 29.630 0.00 0.00 0.00 2.57
2438 5605 8.621532 AGTGTAGATTTACTCATTTTGCTTCA 57.378 30.769 0.00 0.00 0.00 3.02
2439 5606 8.940952 AGAGTGTAGATTTACTCATTTTGCTTC 58.059 33.333 7.09 0.00 44.41 3.86
2440 5607 8.854614 AGAGTGTAGATTTACTCATTTTGCTT 57.145 30.769 7.09 0.00 44.41 3.91
2441 5608 9.944376 TTAGAGTGTAGATTTACTCATTTTGCT 57.056 29.630 7.09 0.00 44.41 3.91
2485 5652 9.906660 GACATTTCAAATGGACTACAAATACAA 57.093 29.630 14.70 0.00 0.00 2.41
2486 5653 9.295825 AGACATTTCAAATGGACTACAAATACA 57.704 29.630 14.70 0.00 0.00 2.29
2489 5656 9.739276 TCTAGACATTTCAAATGGACTACAAAT 57.261 29.630 14.70 0.00 0.00 2.32
2490 5657 9.567776 TTCTAGACATTTCAAATGGACTACAAA 57.432 29.630 14.70 9.16 0.00 2.83
2491 5658 9.567776 TTTCTAGACATTTCAAATGGACTACAA 57.432 29.630 14.70 8.52 0.00 2.41
2492 5659 9.219603 CTTTCTAGACATTTCAAATGGACTACA 57.780 33.333 14.70 3.48 0.00 2.74
2493 5660 9.436957 TCTTTCTAGACATTTCAAATGGACTAC 57.563 33.333 14.70 1.26 0.00 2.73
2513 5680 8.082242 CCTCCGTTTTCAAATATTTGTCTTTCT 58.918 33.333 23.95 0.00 39.18 2.52
2514 5681 7.328493 CCCTCCGTTTTCAAATATTTGTCTTTC 59.672 37.037 23.95 12.84 39.18 2.62
2515 5682 7.014808 TCCCTCCGTTTTCAAATATTTGTCTTT 59.985 33.333 23.95 0.00 39.18 2.52
2516 5683 6.492087 TCCCTCCGTTTTCAAATATTTGTCTT 59.508 34.615 23.95 0.00 39.18 3.01
2517 5684 6.007703 TCCCTCCGTTTTCAAATATTTGTCT 58.992 36.000 23.95 0.00 39.18 3.41
2518 5685 6.072119 ACTCCCTCCGTTTTCAAATATTTGTC 60.072 38.462 23.95 13.65 39.18 3.18
2519 5686 5.773176 ACTCCCTCCGTTTTCAAATATTTGT 59.227 36.000 23.95 1.02 39.18 2.83
2520 5687 6.267496 ACTCCCTCCGTTTTCAAATATTTG 57.733 37.500 20.13 20.13 39.48 2.32
2521 5688 7.173032 ACTACTCCCTCCGTTTTCAAATATTT 58.827 34.615 0.00 0.00 0.00 1.40
2522 5689 6.718294 ACTACTCCCTCCGTTTTCAAATATT 58.282 36.000 0.00 0.00 0.00 1.28
2523 5690 6.309389 ACTACTCCCTCCGTTTTCAAATAT 57.691 37.500 0.00 0.00 0.00 1.28
2524 5691 5.750352 ACTACTCCCTCCGTTTTCAAATA 57.250 39.130 0.00 0.00 0.00 1.40
2525 5692 4.635699 ACTACTCCCTCCGTTTTCAAAT 57.364 40.909 0.00 0.00 0.00 2.32
2526 5693 4.590222 ACTACTACTCCCTCCGTTTTCAAA 59.410 41.667 0.00 0.00 0.00 2.69
2527 5694 4.154942 ACTACTACTCCCTCCGTTTTCAA 58.845 43.478 0.00 0.00 0.00 2.69
2528 5695 3.760684 GACTACTACTCCCTCCGTTTTCA 59.239 47.826 0.00 0.00 0.00 2.69
2529 5696 4.015764 AGACTACTACTCCCTCCGTTTTC 58.984 47.826 0.00 0.00 0.00 2.29
2530 5697 4.044946 AGACTACTACTCCCTCCGTTTT 57.955 45.455 0.00 0.00 0.00 2.43
2531 5698 3.735720 AGACTACTACTCCCTCCGTTT 57.264 47.619 0.00 0.00 0.00 3.60
2532 5699 3.521126 TGTAGACTACTACTCCCTCCGTT 59.479 47.826 13.67 0.00 46.33 4.44
2533 5700 3.110705 TGTAGACTACTACTCCCTCCGT 58.889 50.000 13.67 0.00 46.33 4.69
2534 5701 3.387374 TCTGTAGACTACTACTCCCTCCG 59.613 52.174 13.67 0.00 46.33 4.63
2535 5702 4.655186 TCTCTGTAGACTACTACTCCCTCC 59.345 50.000 13.67 0.00 46.33 4.30
2536 5703 5.874897 TCTCTGTAGACTACTACTCCCTC 57.125 47.826 13.67 0.00 46.33 4.30
2550 5717 0.179100 CATGGCCACGGTCTCTGTAG 60.179 60.000 8.16 0.00 0.00 2.74
2553 5720 2.821366 GCATGGCCACGGTCTCTG 60.821 66.667 8.16 0.48 0.00 3.35
2560 5727 4.541482 GTCATGCGCATGGCCACG 62.541 66.667 41.21 21.52 42.61 4.94
2620 5787 5.808030 CGGAACCAGTTTGTGTATTTTGTTT 59.192 36.000 0.00 0.00 0.00 2.83
2637 5804 3.583276 ATCGCTTGCGTCGGAACCA 62.583 57.895 14.70 0.00 0.00 3.67
2677 5844 6.599244 TGCTCCGACAGATATTTTGAAAATCT 59.401 34.615 6.40 0.00 0.00 2.40
2678 5845 6.785191 TGCTCCGACAGATATTTTGAAAATC 58.215 36.000 6.40 0.00 0.00 2.17
2679 5846 6.757897 TGCTCCGACAGATATTTTGAAAAT 57.242 33.333 8.35 8.35 0.00 1.82
2680 5847 6.206634 ACTTGCTCCGACAGATATTTTGAAAA 59.793 34.615 0.00 0.00 0.00 2.29
2681 5848 5.705441 ACTTGCTCCGACAGATATTTTGAAA 59.295 36.000 0.00 0.00 0.00 2.69
2684 5851 6.662414 TTACTTGCTCCGACAGATATTTTG 57.338 37.500 0.00 0.00 0.00 2.44
2685 5852 6.879458 ACTTTACTTGCTCCGACAGATATTTT 59.121 34.615 0.00 0.00 0.00 1.82
2687 5854 5.812642 CACTTTACTTGCTCCGACAGATATT 59.187 40.000 0.00 0.00 0.00 1.28
2688 5855 5.352284 CACTTTACTTGCTCCGACAGATAT 58.648 41.667 0.00 0.00 0.00 1.63
2689 5856 4.744570 CACTTTACTTGCTCCGACAGATA 58.255 43.478 0.00 0.00 0.00 1.98
2729 5898 3.941483 CAGGCCAACGAGTTCTGAATAAT 59.059 43.478 5.01 0.00 0.00 1.28
2730 5899 3.244422 ACAGGCCAACGAGTTCTGAATAA 60.244 43.478 5.01 0.00 0.00 1.40
2731 5900 2.301870 ACAGGCCAACGAGTTCTGAATA 59.698 45.455 5.01 0.00 0.00 1.75
2732 5901 1.072331 ACAGGCCAACGAGTTCTGAAT 59.928 47.619 5.01 0.00 0.00 2.57
2735 5904 2.386661 ATACAGGCCAACGAGTTCTG 57.613 50.000 5.01 0.00 0.00 3.02
2760 5929 3.488047 GGTTCATGCGACCAGATGATTTG 60.488 47.826 11.80 0.00 37.14 2.32
2810 5979 8.543774 GGAGGAGATTAAATATGGAAGCTCATA 58.456 37.037 13.94 0.00 39.34 2.15
2850 6019 0.472471 AACTTCTCCTTGTGCGGGAA 59.528 50.000 0.00 0.00 31.92 3.97
2878 6047 3.399046 TGCTACATCCGGCACCTT 58.601 55.556 0.00 0.00 33.23 3.50
2895 6064 4.217550 ACGTATGTGCTAAATGGCAAAAGT 59.782 37.500 0.00 0.00 44.18 2.66
2930 6099 8.911662 CAAAGCTTACGTATGTGCTAAATTTTT 58.088 29.630 15.31 5.83 35.09 1.94
2931 6100 7.540745 CCAAAGCTTACGTATGTGCTAAATTTT 59.459 33.333 15.31 6.35 35.09 1.82
2932 6101 7.027161 CCAAAGCTTACGTATGTGCTAAATTT 58.973 34.615 15.31 0.00 35.09 1.82
2933 6102 6.551736 CCAAAGCTTACGTATGTGCTAAATT 58.448 36.000 15.31 6.88 35.09 1.82
2934 6103 5.448632 GCCAAAGCTTACGTATGTGCTAAAT 60.449 40.000 15.31 6.02 35.09 1.40
2935 6104 4.142773 GCCAAAGCTTACGTATGTGCTAAA 60.143 41.667 15.31 0.00 35.09 1.85
2936 6105 3.372822 GCCAAAGCTTACGTATGTGCTAA 59.627 43.478 15.31 0.00 35.09 3.09
2937 6106 2.933906 GCCAAAGCTTACGTATGTGCTA 59.066 45.455 15.31 0.00 35.09 3.49
2938 6107 1.737793 GCCAAAGCTTACGTATGTGCT 59.262 47.619 0.00 10.47 37.37 4.40
2939 6108 1.529010 CGCCAAAGCTTACGTATGTGC 60.529 52.381 0.00 8.56 36.60 4.57
2940 6109 1.996898 TCGCCAAAGCTTACGTATGTG 59.003 47.619 0.00 0.00 36.60 3.21
2941 6110 1.997606 GTCGCCAAAGCTTACGTATGT 59.002 47.619 0.00 0.00 36.60 2.29
2942 6111 1.326548 GGTCGCCAAAGCTTACGTATG 59.673 52.381 0.00 0.00 36.60 2.39
2943 6112 1.206371 AGGTCGCCAAAGCTTACGTAT 59.794 47.619 0.00 0.00 36.60 3.06
2944 6113 0.604578 AGGTCGCCAAAGCTTACGTA 59.395 50.000 0.00 0.00 36.60 3.57
2985 6154 7.514721 AGTAAAAGAAAGGGACACAGATGTTA 58.485 34.615 0.00 0.00 39.95 2.41
3102 6271 3.449227 CCAGTCGGCGCTCACCTA 61.449 66.667 7.64 0.00 0.00 3.08
3106 6275 3.158537 TTGTTCCAGTCGGCGCTCA 62.159 57.895 7.64 0.00 0.00 4.26
3125 6294 7.809665 TGTACTTCATCATGTCATCTTTGTTG 58.190 34.615 0.00 0.00 0.00 3.33
3126 6295 7.984422 TGTACTTCATCATGTCATCTTTGTT 57.016 32.000 0.00 0.00 0.00 2.83
3127 6296 7.984422 TTGTACTTCATCATGTCATCTTTGT 57.016 32.000 0.00 0.00 0.00 2.83
3128 6297 9.121517 GTTTTGTACTTCATCATGTCATCTTTG 57.878 33.333 0.00 0.00 0.00 2.77
3129 6298 8.849168 TGTTTTGTACTTCATCATGTCATCTTT 58.151 29.630 0.00 0.00 0.00 2.52
3130 6299 8.292448 GTGTTTTGTACTTCATCATGTCATCTT 58.708 33.333 0.00 0.00 0.00 2.40
3131 6300 7.445096 TGTGTTTTGTACTTCATCATGTCATCT 59.555 33.333 0.00 0.00 0.00 2.90
3132 6301 7.584108 TGTGTTTTGTACTTCATCATGTCATC 58.416 34.615 0.00 0.00 0.00 2.92
3133 6302 7.509141 TGTGTTTTGTACTTCATCATGTCAT 57.491 32.000 0.00 0.00 0.00 3.06
3134 6303 6.934048 TGTGTTTTGTACTTCATCATGTCA 57.066 33.333 0.00 0.00 0.00 3.58
3135 6304 7.362662 ACATGTGTTTTGTACTTCATCATGTC 58.637 34.615 0.00 0.00 38.90 3.06
3136 6305 7.275888 ACATGTGTTTTGTACTTCATCATGT 57.724 32.000 0.00 13.10 38.56 3.21
3137 6306 8.720562 TCTACATGTGTTTTGTACTTCATCATG 58.279 33.333 9.11 5.41 36.99 3.07
3138 6307 8.846943 TCTACATGTGTTTTGTACTTCATCAT 57.153 30.769 9.11 0.00 0.00 2.45
3139 6308 7.095229 GCTCTACATGTGTTTTGTACTTCATCA 60.095 37.037 9.11 0.00 0.00 3.07
3140 6309 7.118390 AGCTCTACATGTGTTTTGTACTTCATC 59.882 37.037 9.11 0.00 0.00 2.92
3141 6310 6.936900 AGCTCTACATGTGTTTTGTACTTCAT 59.063 34.615 9.11 0.00 0.00 2.57
3142 6311 6.288294 AGCTCTACATGTGTTTTGTACTTCA 58.712 36.000 9.11 0.00 0.00 3.02
3143 6312 6.423905 TGAGCTCTACATGTGTTTTGTACTTC 59.576 38.462 16.19 0.00 0.00 3.01
3144 6313 6.288294 TGAGCTCTACATGTGTTTTGTACTT 58.712 36.000 16.19 0.00 0.00 2.24
3145 6314 5.853936 TGAGCTCTACATGTGTTTTGTACT 58.146 37.500 16.19 0.00 0.00 2.73
3146 6315 6.537566 CATGAGCTCTACATGTGTTTTGTAC 58.462 40.000 16.19 0.00 39.84 2.90
3147 6316 5.122239 GCATGAGCTCTACATGTGTTTTGTA 59.878 40.000 16.19 0.00 44.52 2.41
3148 6317 4.083110 GCATGAGCTCTACATGTGTTTTGT 60.083 41.667 16.19 0.00 44.52 2.83
3149 6318 4.409570 GCATGAGCTCTACATGTGTTTTG 58.590 43.478 16.19 0.00 44.52 2.44
3150 6319 4.691860 GCATGAGCTCTACATGTGTTTT 57.308 40.909 16.19 0.00 44.52 2.43
3164 6333 2.876550 TGTGCATCTTATGAGCATGAGC 59.123 45.455 0.00 0.00 40.78 4.26
3165 6334 3.875134 TGTGTGCATCTTATGAGCATGAG 59.125 43.478 0.00 0.00 40.78 2.90
3166 6335 3.876341 TGTGTGCATCTTATGAGCATGA 58.124 40.909 0.00 0.00 40.78 3.07
3167 6336 4.784329 GATGTGTGCATCTTATGAGCATG 58.216 43.478 0.00 0.00 45.97 4.06
3178 6347 3.318886 TGTTGCATTTGATGTGTGCATC 58.681 40.909 0.00 0.90 46.90 3.91
3179 6348 3.388345 TGTTGCATTTGATGTGTGCAT 57.612 38.095 0.00 0.00 46.90 3.96
3180 6349 2.884894 TGTTGCATTTGATGTGTGCA 57.115 40.000 0.00 0.00 46.15 4.57
3181 6350 4.533225 TTTTGTTGCATTTGATGTGTGC 57.467 36.364 0.00 0.00 39.26 4.57
3182 6351 8.121086 TGTTATTTTTGTTGCATTTGATGTGTG 58.879 29.630 0.00 0.00 0.00 3.82
3183 6352 8.206325 TGTTATTTTTGTTGCATTTGATGTGT 57.794 26.923 0.00 0.00 0.00 3.72
3184 6353 9.499585 TTTGTTATTTTTGTTGCATTTGATGTG 57.500 25.926 0.00 0.00 0.00 3.21
3193 6362 9.107177 ACTTGATGATTTGTTATTTTTGTTGCA 57.893 25.926 0.00 0.00 0.00 4.08
3194 6363 9.934190 AACTTGATGATTTGTTATTTTTGTTGC 57.066 25.926 0.00 0.00 0.00 4.17
3208 6377 9.846248 GCTGAAACTGTTATAACTTGATGATTT 57.154 29.630 16.33 6.58 0.00 2.17
3209 6378 9.013229 TGCTGAAACTGTTATAACTTGATGATT 57.987 29.630 16.33 2.95 0.00 2.57
3210 6379 8.565896 TGCTGAAACTGTTATAACTTGATGAT 57.434 30.769 16.33 0.00 0.00 2.45
3211 6380 7.877612 TCTGCTGAAACTGTTATAACTTGATGA 59.122 33.333 16.33 0.00 0.00 2.92
3212 6381 8.032952 TCTGCTGAAACTGTTATAACTTGATG 57.967 34.615 16.33 4.84 0.00 3.07
3213 6382 8.798859 ATCTGCTGAAACTGTTATAACTTGAT 57.201 30.769 16.33 2.36 0.00 2.57
3214 6383 8.621532 AATCTGCTGAAACTGTTATAACTTGA 57.378 30.769 16.33 0.00 0.00 3.02
3217 6386 9.502091 TGTTAATCTGCTGAAACTGTTATAACT 57.498 29.630 16.33 0.00 0.00 2.24
3220 6389 9.665719 TGATGTTAATCTGCTGAAACTGTTATA 57.334 29.630 0.00 0.00 33.61 0.98
3221 6390 8.565896 TGATGTTAATCTGCTGAAACTGTTAT 57.434 30.769 0.00 0.00 33.61 1.89
3222 6391 7.977789 TGATGTTAATCTGCTGAAACTGTTA 57.022 32.000 0.00 0.00 33.61 2.41
3223 6392 6.882610 TGATGTTAATCTGCTGAAACTGTT 57.117 33.333 0.00 0.00 33.61 3.16
3224 6393 8.743085 ATATGATGTTAATCTGCTGAAACTGT 57.257 30.769 0.00 0.00 33.61 3.55
3230 6399 9.866798 GAGTGATATATGATGTTAATCTGCTGA 57.133 33.333 0.00 0.00 33.61 4.26
3231 6400 9.872721 AGAGTGATATATGATGTTAATCTGCTG 57.127 33.333 0.00 0.00 33.61 4.41
3240 6409 8.913487 TCATTGCAAGAGTGATATATGATGTT 57.087 30.769 4.94 0.00 0.00 2.71
3241 6410 8.947115 CATCATTGCAAGAGTGATATATGATGT 58.053 33.333 17.86 0.00 41.16 3.06
3242 6411 9.162764 TCATCATTGCAAGAGTGATATATGATG 57.837 33.333 19.18 19.18 44.56 3.07
3243 6412 9.907229 ATCATCATTGCAAGAGTGATATATGAT 57.093 29.630 16.84 12.57 33.16 2.45
3244 6413 9.734984 AATCATCATTGCAAGAGTGATATATGA 57.265 29.630 18.01 11.92 31.74 2.15
3247 6416 9.662947 CCTAATCATCATTGCAAGAGTGATATA 57.337 33.333 18.01 9.56 31.74 0.86
3248 6417 7.610692 CCCTAATCATCATTGCAAGAGTGATAT 59.389 37.037 18.01 12.79 31.74 1.63
3249 6418 6.938596 CCCTAATCATCATTGCAAGAGTGATA 59.061 38.462 18.01 7.80 31.74 2.15
3250 6419 5.768662 CCCTAATCATCATTGCAAGAGTGAT 59.231 40.000 4.94 10.85 33.08 3.06
3251 6420 5.128205 CCCTAATCATCATTGCAAGAGTGA 58.872 41.667 4.94 8.95 0.00 3.41
3252 6421 4.261489 GCCCTAATCATCATTGCAAGAGTG 60.261 45.833 4.94 3.36 0.00 3.51
3253 6422 3.887716 GCCCTAATCATCATTGCAAGAGT 59.112 43.478 4.94 0.00 0.00 3.24
3254 6423 3.887110 TGCCCTAATCATCATTGCAAGAG 59.113 43.478 4.94 0.00 0.00 2.85
3255 6424 3.900971 TGCCCTAATCATCATTGCAAGA 58.099 40.909 4.94 3.10 0.00 3.02
3256 6425 4.866508 ATGCCCTAATCATCATTGCAAG 57.133 40.909 4.94 0.00 0.00 4.01
3257 6426 6.550481 TCTTAATGCCCTAATCATCATTGCAA 59.450 34.615 0.00 0.00 32.20 4.08
3258 6427 6.069994 TCTTAATGCCCTAATCATCATTGCA 58.930 36.000 0.00 0.00 32.20 4.08
3259 6428 6.579666 TCTTAATGCCCTAATCATCATTGC 57.420 37.500 0.00 0.00 32.20 3.56
3260 6429 8.118976 ACATCTTAATGCCCTAATCATCATTG 57.881 34.615 0.00 0.00 36.26 2.82
3261 6430 9.236006 GTACATCTTAATGCCCTAATCATCATT 57.764 33.333 0.00 0.00 36.26 2.57
3262 6431 8.609483 AGTACATCTTAATGCCCTAATCATCAT 58.391 33.333 0.00 0.00 36.26 2.45
3263 6432 7.977818 AGTACATCTTAATGCCCTAATCATCA 58.022 34.615 0.00 0.00 36.26 3.07
3264 6433 8.097038 TGAGTACATCTTAATGCCCTAATCATC 58.903 37.037 0.00 0.00 36.26 2.92
3265 6434 7.977818 TGAGTACATCTTAATGCCCTAATCAT 58.022 34.615 0.00 0.00 36.26 2.45
3266 6435 7.373617 TGAGTACATCTTAATGCCCTAATCA 57.626 36.000 0.00 0.00 36.26 2.57
3267 6436 8.560374 GTTTGAGTACATCTTAATGCCCTAATC 58.440 37.037 0.00 0.00 36.26 1.75
3268 6437 8.052748 TGTTTGAGTACATCTTAATGCCCTAAT 58.947 33.333 0.00 0.00 36.26 1.73
3269 6438 7.398829 TGTTTGAGTACATCTTAATGCCCTAA 58.601 34.615 0.00 0.00 36.26 2.69
3270 6439 6.953101 TGTTTGAGTACATCTTAATGCCCTA 58.047 36.000 0.00 0.00 36.26 3.53
3271 6440 5.815581 TGTTTGAGTACATCTTAATGCCCT 58.184 37.500 0.00 0.00 36.26 5.19
3272 6441 6.509418 TTGTTTGAGTACATCTTAATGCCC 57.491 37.500 0.00 0.00 36.26 5.36
3273 6442 6.030228 GCTTGTTTGAGTACATCTTAATGCC 58.970 40.000 0.00 0.00 36.26 4.40
3274 6443 6.611381 TGCTTGTTTGAGTACATCTTAATGC 58.389 36.000 0.00 0.00 36.26 3.56
3275 6444 7.699391 CCATGCTTGTTTGAGTACATCTTAATG 59.301 37.037 0.00 0.00 38.93 1.90
3276 6445 7.629222 GCCATGCTTGTTTGAGTACATCTTAAT 60.629 37.037 0.00 0.00 0.00 1.40
3277 6446 6.349280 GCCATGCTTGTTTGAGTACATCTTAA 60.349 38.462 0.00 0.00 0.00 1.85
3278 6447 5.123820 GCCATGCTTGTTTGAGTACATCTTA 59.876 40.000 0.00 0.00 0.00 2.10
3279 6448 4.082571 GCCATGCTTGTTTGAGTACATCTT 60.083 41.667 0.00 0.00 0.00 2.40
3280 6449 3.441572 GCCATGCTTGTTTGAGTACATCT 59.558 43.478 0.00 0.00 0.00 2.90
3281 6450 3.191162 TGCCATGCTTGTTTGAGTACATC 59.809 43.478 0.00 0.00 0.00 3.06
3282 6451 3.057315 GTGCCATGCTTGTTTGAGTACAT 60.057 43.478 0.00 0.00 0.00 2.29
3283 6452 2.293122 GTGCCATGCTTGTTTGAGTACA 59.707 45.455 0.00 0.00 0.00 2.90
3284 6453 2.293122 TGTGCCATGCTTGTTTGAGTAC 59.707 45.455 0.00 0.00 0.00 2.73
3285 6454 2.553602 CTGTGCCATGCTTGTTTGAGTA 59.446 45.455 0.00 0.00 0.00 2.59
3286 6455 1.338973 CTGTGCCATGCTTGTTTGAGT 59.661 47.619 0.00 0.00 0.00 3.41
3287 6456 1.338973 ACTGTGCCATGCTTGTTTGAG 59.661 47.619 0.00 0.00 0.00 3.02
3288 6457 1.067364 CACTGTGCCATGCTTGTTTGA 59.933 47.619 0.00 0.00 0.00 2.69
3289 6458 1.493772 CACTGTGCCATGCTTGTTTG 58.506 50.000 0.00 0.00 0.00 2.93
3290 6459 0.390124 CCACTGTGCCATGCTTGTTT 59.610 50.000 1.29 0.00 0.00 2.83
3291 6460 0.467844 TCCACTGTGCCATGCTTGTT 60.468 50.000 1.29 0.00 0.00 2.83
3292 6461 0.467844 TTCCACTGTGCCATGCTTGT 60.468 50.000 1.29 0.00 0.00 3.16
3293 6462 0.892755 ATTCCACTGTGCCATGCTTG 59.107 50.000 1.29 0.00 0.00 4.01
3294 6463 0.892755 CATTCCACTGTGCCATGCTT 59.107 50.000 1.29 0.00 0.00 3.91
3295 6464 0.038599 TCATTCCACTGTGCCATGCT 59.961 50.000 1.29 0.00 0.00 3.79
3296 6465 0.889994 TTCATTCCACTGTGCCATGC 59.110 50.000 1.29 0.00 0.00 4.06
3297 6466 3.056393 ACATTTCATTCCACTGTGCCATG 60.056 43.478 1.29 6.68 0.00 3.66
3298 6467 3.167485 ACATTTCATTCCACTGTGCCAT 58.833 40.909 1.29 0.00 0.00 4.40
3299 6468 2.596346 ACATTTCATTCCACTGTGCCA 58.404 42.857 1.29 0.00 0.00 4.92
3300 6469 4.009675 TCTACATTTCATTCCACTGTGCC 58.990 43.478 1.29 0.00 0.00 5.01
3301 6470 4.437930 GCTCTACATTTCATTCCACTGTGC 60.438 45.833 1.29 0.00 0.00 4.57
3302 6471 4.696877 TGCTCTACATTTCATTCCACTGTG 59.303 41.667 0.00 0.00 0.00 3.66
3303 6472 4.910195 TGCTCTACATTTCATTCCACTGT 58.090 39.130 0.00 0.00 0.00 3.55
3304 6473 5.821470 AGATGCTCTACATTTCATTCCACTG 59.179 40.000 0.00 0.00 39.84 3.66
3305 6474 5.999044 AGATGCTCTACATTTCATTCCACT 58.001 37.500 0.00 0.00 39.84 4.00
3306 6475 5.819379 TGAGATGCTCTACATTTCATTCCAC 59.181 40.000 0.00 0.00 43.08 4.02
3307 6476 5.993055 TGAGATGCTCTACATTTCATTCCA 58.007 37.500 0.00 0.00 43.08 3.53
3312 6481 4.627035 CGTTGTGAGATGCTCTACATTTCA 59.373 41.667 0.00 0.00 45.07 2.69
3313 6482 4.864806 TCGTTGTGAGATGCTCTACATTTC 59.135 41.667 0.00 0.00 39.84 2.17
3314 6483 4.820897 TCGTTGTGAGATGCTCTACATTT 58.179 39.130 0.00 0.00 39.84 2.32
3315 6484 4.456280 TCGTTGTGAGATGCTCTACATT 57.544 40.909 0.00 0.00 39.84 2.71
3316 6485 4.177026 GTTCGTTGTGAGATGCTCTACAT 58.823 43.478 0.00 0.00 43.54 2.29
3317 6486 3.005367 TGTTCGTTGTGAGATGCTCTACA 59.995 43.478 0.00 0.00 0.00 2.74
3318 6487 3.575630 TGTTCGTTGTGAGATGCTCTAC 58.424 45.455 0.00 0.00 0.00 2.59
3319 6488 3.934457 TGTTCGTTGTGAGATGCTCTA 57.066 42.857 0.00 0.00 0.00 2.43
3320 6489 2.820059 TGTTCGTTGTGAGATGCTCT 57.180 45.000 0.00 0.00 0.00 4.09
3321 6490 4.410492 AAATGTTCGTTGTGAGATGCTC 57.590 40.909 0.00 0.00 0.00 4.26
3322 6491 4.275689 TCAAAATGTTCGTTGTGAGATGCT 59.724 37.500 0.00 0.00 0.00 3.79
3323 6492 4.379793 GTCAAAATGTTCGTTGTGAGATGC 59.620 41.667 0.00 0.00 0.00 3.91
3324 6493 5.509771 TGTCAAAATGTTCGTTGTGAGATG 58.490 37.500 0.00 0.00 0.00 2.90
3325 6494 5.749596 TGTCAAAATGTTCGTTGTGAGAT 57.250 34.783 0.00 0.00 0.00 2.75
3326 6495 5.749596 ATGTCAAAATGTTCGTTGTGAGA 57.250 34.783 0.00 0.00 0.00 3.27
3327 6496 7.269084 GTGATATGTCAAAATGTTCGTTGTGAG 59.731 37.037 0.00 0.00 35.80 3.51
3328 6497 7.075121 GTGATATGTCAAAATGTTCGTTGTGA 58.925 34.615 0.00 0.00 35.80 3.58
3329 6498 6.855403 TGTGATATGTCAAAATGTTCGTTGTG 59.145 34.615 0.00 0.00 35.80 3.33
3330 6499 6.964908 TGTGATATGTCAAAATGTTCGTTGT 58.035 32.000 0.00 0.00 35.80 3.32
3331 6500 7.461807 GCATGTGATATGTCAAAATGTTCGTTG 60.462 37.037 14.16 0.00 35.80 4.10
3332 6501 6.527722 GCATGTGATATGTCAAAATGTTCGTT 59.472 34.615 14.16 0.00 35.80 3.85
3333 6502 6.029607 GCATGTGATATGTCAAAATGTTCGT 58.970 36.000 14.16 0.00 35.80 3.85
3334 6503 6.021232 GTGCATGTGATATGTCAAAATGTTCG 60.021 38.462 14.16 0.00 35.80 3.95
3335 6504 6.021232 CGTGCATGTGATATGTCAAAATGTTC 60.021 38.462 14.16 8.95 35.80 3.18
3336 6505 5.801444 CGTGCATGTGATATGTCAAAATGTT 59.199 36.000 14.16 0.00 35.80 2.71
3337 6506 5.123661 TCGTGCATGTGATATGTCAAAATGT 59.876 36.000 5.68 0.00 35.80 2.71
3338 6507 5.571277 TCGTGCATGTGATATGTCAAAATG 58.429 37.500 5.68 10.39 35.80 2.32
3339 6508 5.816449 TCGTGCATGTGATATGTCAAAAT 57.184 34.783 5.68 0.00 35.80 1.82
3340 6509 5.619625 TTCGTGCATGTGATATGTCAAAA 57.380 34.783 5.68 0.00 35.80 2.44
3341 6510 5.389778 GTTTCGTGCATGTGATATGTCAAA 58.610 37.500 5.68 0.00 35.80 2.69
3342 6511 4.435386 CGTTTCGTGCATGTGATATGTCAA 60.435 41.667 5.68 0.00 35.80 3.18
3343 6512 3.061965 CGTTTCGTGCATGTGATATGTCA 59.938 43.478 5.68 0.00 0.00 3.58
3344 6513 3.544048 CCGTTTCGTGCATGTGATATGTC 60.544 47.826 5.68 0.00 0.00 3.06
3345 6514 2.351418 CCGTTTCGTGCATGTGATATGT 59.649 45.455 5.68 0.00 0.00 2.29
3346 6515 2.607180 TCCGTTTCGTGCATGTGATATG 59.393 45.455 5.68 0.00 0.00 1.78
3347 6516 2.866156 CTCCGTTTCGTGCATGTGATAT 59.134 45.455 5.68 0.00 0.00 1.63
3348 6517 2.267426 CTCCGTTTCGTGCATGTGATA 58.733 47.619 5.68 0.00 0.00 2.15
3349 6518 1.078709 CTCCGTTTCGTGCATGTGAT 58.921 50.000 5.68 0.00 0.00 3.06
3350 6519 0.249699 ACTCCGTTTCGTGCATGTGA 60.250 50.000 5.68 0.00 0.00 3.58
3351 6520 1.390123 CTACTCCGTTTCGTGCATGTG 59.610 52.381 5.68 0.00 0.00 3.21
3352 6521 1.000506 ACTACTCCGTTTCGTGCATGT 59.999 47.619 5.68 0.00 0.00 3.21
3353 6522 1.710013 ACTACTCCGTTTCGTGCATG 58.290 50.000 0.00 0.00 0.00 4.06
3354 6523 3.444916 CATACTACTCCGTTTCGTGCAT 58.555 45.455 0.00 0.00 0.00 3.96
3355 6524 2.871133 CATACTACTCCGTTTCGTGCA 58.129 47.619 0.00 0.00 0.00 4.57
3356 6525 1.587034 GCATACTACTCCGTTTCGTGC 59.413 52.381 0.00 0.00 0.00 5.34
3357 6526 2.871133 TGCATACTACTCCGTTTCGTG 58.129 47.619 0.00 0.00 0.00 4.35
3358 6527 3.444916 CATGCATACTACTCCGTTTCGT 58.555 45.455 0.00 0.00 0.00 3.85
3359 6528 2.794910 CCATGCATACTACTCCGTTTCG 59.205 50.000 0.00 0.00 0.00 3.46
3360 6529 4.051922 CTCCATGCATACTACTCCGTTTC 58.948 47.826 0.00 0.00 0.00 2.78
3361 6530 3.451178 ACTCCATGCATACTACTCCGTTT 59.549 43.478 0.00 0.00 0.00 3.60
3362 6531 3.031736 ACTCCATGCATACTACTCCGTT 58.968 45.455 0.00 0.00 0.00 4.44
3363 6532 2.667470 ACTCCATGCATACTACTCCGT 58.333 47.619 0.00 0.00 0.00 4.69
3364 6533 3.735237 AACTCCATGCATACTACTCCG 57.265 47.619 0.00 0.00 0.00 4.63
3365 6534 6.346477 TCATAACTCCATGCATACTACTCC 57.654 41.667 0.00 0.00 0.00 3.85
3366 6535 6.312426 GCATCATAACTCCATGCATACTACTC 59.688 42.308 0.00 0.00 42.18 2.59
3367 6536 6.169094 GCATCATAACTCCATGCATACTACT 58.831 40.000 0.00 0.00 42.18 2.57
3368 6537 5.062683 CGCATCATAACTCCATGCATACTAC 59.937 44.000 0.00 0.00 42.65 2.73
3369 6538 5.047377 TCGCATCATAACTCCATGCATACTA 60.047 40.000 0.00 0.00 42.65 1.82
3370 6539 3.999001 CGCATCATAACTCCATGCATACT 59.001 43.478 0.00 0.00 42.65 2.12
3371 6540 3.996363 TCGCATCATAACTCCATGCATAC 59.004 43.478 0.00 0.00 42.65 2.39
3372 6541 4.270245 TCGCATCATAACTCCATGCATA 57.730 40.909 0.00 0.00 42.65 3.14
3373 6542 3.130280 TCGCATCATAACTCCATGCAT 57.870 42.857 0.00 0.00 42.65 3.96
3374 6543 2.618442 TCGCATCATAACTCCATGCA 57.382 45.000 0.00 0.00 42.65 3.96
3375 6544 5.049474 TGTTTATCGCATCATAACTCCATGC 60.049 40.000 0.00 0.00 39.70 4.06
3376 6545 6.347969 CCTGTTTATCGCATCATAACTCCATG 60.348 42.308 0.00 0.00 0.00 3.66
3377 6546 5.702670 CCTGTTTATCGCATCATAACTCCAT 59.297 40.000 0.00 0.00 0.00 3.41
3378 6547 5.056480 CCTGTTTATCGCATCATAACTCCA 58.944 41.667 0.00 0.00 0.00 3.86
3379 6548 5.297547 TCCTGTTTATCGCATCATAACTCC 58.702 41.667 0.00 0.00 0.00 3.85
3380 6549 5.107298 GCTCCTGTTTATCGCATCATAACTC 60.107 44.000 0.00 0.00 0.00 3.01
3381 6550 4.752101 GCTCCTGTTTATCGCATCATAACT 59.248 41.667 0.00 0.00 0.00 2.24
3382 6551 4.752101 AGCTCCTGTTTATCGCATCATAAC 59.248 41.667 0.00 0.00 0.00 1.89
3383 6552 4.960938 AGCTCCTGTTTATCGCATCATAA 58.039 39.130 0.00 0.00 0.00 1.90
3384 6553 4.607293 AGCTCCTGTTTATCGCATCATA 57.393 40.909 0.00 0.00 0.00 2.15
3385 6554 3.482156 AGCTCCTGTTTATCGCATCAT 57.518 42.857 0.00 0.00 0.00 2.45
3386 6555 2.988010 AGCTCCTGTTTATCGCATCA 57.012 45.000 0.00 0.00 0.00 3.07
3387 6556 5.734855 TTTTAGCTCCTGTTTATCGCATC 57.265 39.130 0.00 0.00 0.00 3.91
3388 6557 6.699575 ATTTTTAGCTCCTGTTTATCGCAT 57.300 33.333 0.00 0.00 0.00 4.73
3389 6558 7.639039 CATATTTTTAGCTCCTGTTTATCGCA 58.361 34.615 0.00 0.00 0.00 5.10
3390 6559 6.578919 GCATATTTTTAGCTCCTGTTTATCGC 59.421 38.462 0.00 0.00 0.00 4.58
3391 6560 7.639039 TGCATATTTTTAGCTCCTGTTTATCG 58.361 34.615 0.00 0.00 0.00 2.92
3392 6561 9.801873 TTTGCATATTTTTAGCTCCTGTTTATC 57.198 29.630 0.00 0.00 0.00 1.75
3465 6634 4.400529 AACACCACAAAACAAGGATTCC 57.599 40.909 0.00 0.00 0.00 3.01
3467 6636 3.938334 GCAAACACCACAAAACAAGGATT 59.062 39.130 0.00 0.00 0.00 3.01
3480 6649 5.694006 GCATACAAACATTAAGCAAACACCA 59.306 36.000 0.00 0.00 0.00 4.17
3510 6680 6.343716 ACAAGTTAAACATGGCATTGATGA 57.656 33.333 0.00 0.00 0.00 2.92
3583 6753 9.784680 GATCTACACGAAATTCTAGTCAAGTAA 57.215 33.333 0.00 0.00 0.00 2.24
3629 6800 3.963383 AGTTGGAGTTGTTAAACAGCG 57.037 42.857 0.00 0.00 38.88 5.18
3705 6876 5.815222 AGGCCTGAAACAACATAAAACAAAC 59.185 36.000 3.11 0.00 0.00 2.93
3724 6895 4.588528 TCAAAGCAAGTTTAAATGAGGCCT 59.411 37.500 3.86 3.86 0.00 5.19
3749 6920 7.889469 AGAGATTATGCAAACAAGAACAACAT 58.111 30.769 0.00 0.00 0.00 2.71
3768 6939 4.080695 TGAAGCTACTCATGGCAAGAGATT 60.081 41.667 25.01 13.49 36.91 2.40
3810 6982 3.130869 GGCATGATGTTCAACCAAGCATA 59.869 43.478 0.00 0.00 29.85 3.14
3823 6995 2.425668 CACACATGACATGGCATGATGT 59.574 45.455 41.43 34.23 46.64 3.06
3855 7028 3.466836 TCGAGAAGAAGCACACAACATT 58.533 40.909 0.00 0.00 0.00 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.