Multiple sequence alignment - TraesCS3B01G044100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G044100 chr3B 100.000 4556 0 0 1 4556 22475622 22471067 0.000000e+00 8414.0
1 TraesCS3B01G044100 chr3B 92.871 996 56 4 826 1821 22523368 22524348 0.000000e+00 1432.0
2 TraesCS3B01G044100 chr3B 82.136 1461 212 32 2289 3708 22511854 22513306 0.000000e+00 1206.0
3 TraesCS3B01G044100 chr3B 97.917 576 12 0 3981 4556 340553711 340553136 0.000000e+00 998.0
4 TraesCS3B01G044100 chr3B 81.794 1115 160 35 2621 3712 22344986 22343892 0.000000e+00 894.0
5 TraesCS3B01G044100 chr3B 89.723 506 37 9 160 663 22522858 22523350 2.310000e-177 632.0
6 TraesCS3B01G044100 chr3B 74.875 800 170 20 2687 3467 22518442 22519229 7.300000e-88 335.0
7 TraesCS3B01G044100 chr3B 88.945 199 16 5 5 199 107961669 107961865 1.640000e-59 241.0
8 TraesCS3B01G044100 chr3B 82.203 236 22 9 3773 3989 445239282 445239048 7.780000e-43 185.0
9 TraesCS3B01G044100 chr3A 94.723 1838 80 7 1928 3753 20933437 20935269 0.000000e+00 2841.0
10 TraesCS3B01G044100 chr3A 93.784 1110 64 4 827 1935 20931441 20932546 0.000000e+00 1663.0
11 TraesCS3B01G044100 chr3A 82.588 1476 198 40 2282 3708 20896864 20898329 0.000000e+00 1247.0
12 TraesCS3B01G044100 chr3A 83.145 1329 172 28 2282 3565 20835713 20837034 0.000000e+00 1166.0
13 TraesCS3B01G044100 chr3A 92.432 555 29 9 198 743 20930894 20931444 0.000000e+00 780.0
14 TraesCS3B01G044100 chr3A 82.800 250 23 7 3759 3989 737854698 737854450 5.970000e-49 206.0
15 TraesCS3B01G044100 chr3A 82.400 250 24 7 3759 3989 737829205 737828957 2.780000e-47 200.0
16 TraesCS3B01G044100 chr3D 94.817 1775 76 8 1923 3687 15349258 15347490 0.000000e+00 2754.0
17 TraesCS3B01G044100 chr3D 94.915 1121 41 4 819 1935 15361075 15359967 0.000000e+00 1740.0
18 TraesCS3B01G044100 chr3D 82.606 1466 203 32 2288 3711 15372580 15371125 0.000000e+00 1247.0
19 TraesCS3B01G044100 chr3D 83.836 1293 166 30 2304 3562 15395936 15394653 0.000000e+00 1190.0
20 TraesCS3B01G044100 chr3D 91.624 585 33 13 176 748 15361657 15361077 0.000000e+00 795.0
21 TraesCS3B01G044100 chr3D 83.404 235 20 5 3773 3989 346092193 346091960 2.780000e-47 200.0
22 TraesCS3B01G044100 chr4A 81.748 1293 180 36 2313 3576 611269847 611268582 0.000000e+00 1029.0
23 TraesCS3B01G044100 chr4A 79.108 785 130 19 1009 1764 611271614 611270835 1.130000e-140 510.0
24 TraesCS3B01G044100 chr4A 84.727 275 37 5 2278 2550 722298449 722298178 2.090000e-68 270.0
25 TraesCS3B01G044100 chr4A 83.133 249 22 7 3759 3989 610270338 610270092 4.620000e-50 209.0
26 TraesCS3B01G044100 chr4A 100.000 31 0 0 744 774 553727949 553727979 1.770000e-04 58.4
27 TraesCS3B01G044100 chr4B 97.735 574 13 0 3983 4556 41755370 41754797 0.000000e+00 989.0
28 TraesCS3B01G044100 chr4B 97.719 570 13 0 3987 4556 573521929 573522498 0.000000e+00 981.0
29 TraesCS3B01G044100 chr4B 97.232 578 15 1 3977 4554 467883204 467882628 0.000000e+00 977.0
30 TraesCS3B01G044100 chr4B 97.548 571 13 1 3986 4556 184137735 184138304 0.000000e+00 976.0
31 TraesCS3B01G044100 chr4B 91.667 180 10 4 9 185 488893294 488893117 1.270000e-60 244.0
32 TraesCS3B01G044100 chr4B 87.273 55 5 1 780 832 392367954 392367900 1.370000e-05 62.1
33 TraesCS3B01G044100 chr2B 98.060 567 11 0 3990 4556 262403966 262403400 0.000000e+00 987.0
34 TraesCS3B01G044100 chr2B 97.396 576 15 0 3981 4556 439959269 439958694 0.000000e+00 981.0
35 TraesCS3B01G044100 chr2B 86.207 58 6 1 775 830 485038786 485038729 1.370000e-05 62.1
36 TraesCS3B01G044100 chr1B 97.895 570 12 0 3987 4556 551294149 551293580 0.000000e+00 987.0
37 TraesCS3B01G044100 chr1B 97.884 567 12 0 3990 4556 566897483 566896917 0.000000e+00 981.0
38 TraesCS3B01G044100 chr1B 97.548 571 14 0 3986 4556 609666127 609665557 0.000000e+00 977.0
39 TraesCS3B01G044100 chr7B 98.060 567 10 1 3990 4556 621811183 621810618 0.000000e+00 985.0
40 TraesCS3B01G044100 chr5B 97.891 569 12 0 3988 4556 33349898 33349330 0.000000e+00 985.0
41 TraesCS3B01G044100 chr5B 78.878 838 132 22 965 1764 704301290 704302120 4.040000e-145 525.0
42 TraesCS3B01G044100 chr6B 97.711 568 11 1 3989 4556 598839607 598839042 0.000000e+00 976.0
43 TraesCS3B01G044100 chr6B 81.600 250 26 9 3759 3989 41250780 41250532 6.020000e-44 189.0
44 TraesCS3B01G044100 chr6B 90.435 115 11 0 3773 3887 679398767 679398881 7.890000e-33 152.0
45 TraesCS3B01G044100 chr5D 80.748 1096 176 27 2666 3741 558346827 558345747 0.000000e+00 822.0
46 TraesCS3B01G044100 chr5D 79.416 787 127 19 1009 1764 558348799 558348017 1.450000e-144 523.0
47 TraesCS3B01G044100 chr5D 92.045 176 10 3 14 185 420206212 420206037 1.270000e-60 244.0
48 TraesCS3B01G044100 chr5D 91.429 70 3 1 747 813 365320300 365320231 4.850000e-15 93.5
49 TraesCS3B01G044100 chr7A 87.912 273 31 2 2277 2549 63778404 63778674 2.050000e-83 320.0
50 TraesCS3B01G044100 chr7A 84.982 273 38 3 2278 2550 13829916 13830185 1.610000e-69 274.0
51 TraesCS3B01G044100 chr7A 84.328 134 19 2 1993 2125 13972320 13972188 3.700000e-26 130.0
52 TraesCS3B01G044100 chr7A 88.679 53 4 1 779 829 250603426 250603478 3.810000e-06 63.9
53 TraesCS3B01G044100 chr7A 85.965 57 6 2 778 832 93133819 93133763 4.920000e-05 60.2
54 TraesCS3B01G044100 chr7D 85.348 273 37 3 2278 2550 14588167 14588436 3.470000e-71 279.0
55 TraesCS3B01G044100 chr7D 87.013 231 28 2 2278 2508 59415528 59415756 4.520000e-65 259.0
56 TraesCS3B01G044100 chr7D 92.179 179 11 2 13 188 83632076 83631898 2.720000e-62 250.0
57 TraesCS3B01G044100 chr7D 81.600 250 24 9 3759 3989 600224915 600224669 2.160000e-43 187.0
58 TraesCS3B01G044100 chr7D 84.932 146 21 1 1982 2126 59414905 59415050 3.670000e-31 147.0
59 TraesCS3B01G044100 chr7D 88.696 115 13 0 3773 3887 479125510 479125624 1.710000e-29 141.0
60 TraesCS3B01G044100 chr7D 85.938 128 17 1 3761 3887 575442173 575442300 7.950000e-28 135.0
61 TraesCS3B01G044100 chr5A 93.605 172 8 3 19 187 452111763 452111592 2.100000e-63 254.0
62 TraesCS3B01G044100 chr5A 93.529 170 8 2 18 184 382566637 382566806 2.720000e-62 250.0
63 TraesCS3B01G044100 chr5A 83.740 246 21 6 3759 3986 672757711 672757955 9.930000e-52 215.0
64 TraesCS3B01G044100 chr1D 92.982 171 9 2 14 181 36612302 36612132 3.520000e-61 246.0
65 TraesCS3B01G044100 chr6A 91.160 181 14 2 19 197 130354999 130354819 1.270000e-60 244.0
66 TraesCS3B01G044100 chr6A 88.462 52 4 1 780 829 73783260 73783209 1.370000e-05 62.1
67 TraesCS3B01G044100 chr2A 91.620 179 12 2 19 194 416918518 416918340 1.270000e-60 244.0
68 TraesCS3B01G044100 chr2A 89.552 67 5 2 747 813 747601839 747601903 2.920000e-12 84.2
69 TraesCS3B01G044100 chr6D 84.513 226 17 3 3759 3966 18054485 18054260 1.660000e-49 207.0
70 TraesCS3B01G044100 chrUn 82.800 250 23 7 3759 3989 437152778 437152530 5.970000e-49 206.0
71 TraesCS3B01G044100 chrUn 90.517 116 10 1 3773 3887 79381426 79381541 7.890000e-33 152.0
72 TraesCS3B01G044100 chrUn 90.517 116 10 1 3773 3887 79407703 79407818 7.890000e-33 152.0
73 TraesCS3B01G044100 chrUn 87.500 56 5 1 779 832 321243189 321243134 3.810000e-06 63.9
74 TraesCS3B01G044100 chrUn 88.679 53 4 1 779 829 322420799 322420851 3.810000e-06 63.9
75 TraesCS3B01G044100 chr1A 82.400 250 24 7 3759 3989 563586404 563586156 2.780000e-47 200.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G044100 chr3B 22471067 22475622 4555 True 8414.000000 8414 100.000000 1 4556 1 chr3B.!!$R2 4555
1 TraesCS3B01G044100 chr3B 22511854 22513306 1452 False 1206.000000 1206 82.136000 2289 3708 1 chr3B.!!$F1 1419
2 TraesCS3B01G044100 chr3B 340553136 340553711 575 True 998.000000 998 97.917000 3981 4556 1 chr3B.!!$R3 575
3 TraesCS3B01G044100 chr3B 22343892 22344986 1094 True 894.000000 894 81.794000 2621 3712 1 chr3B.!!$R1 1091
4 TraesCS3B01G044100 chr3B 22518442 22524348 5906 False 799.666667 1432 85.823000 160 3467 3 chr3B.!!$F3 3307
5 TraesCS3B01G044100 chr3A 20930894 20935269 4375 False 1761.333333 2841 93.646333 198 3753 3 chr3A.!!$F3 3555
6 TraesCS3B01G044100 chr3A 20896864 20898329 1465 False 1247.000000 1247 82.588000 2282 3708 1 chr3A.!!$F2 1426
7 TraesCS3B01G044100 chr3A 20835713 20837034 1321 False 1166.000000 1166 83.145000 2282 3565 1 chr3A.!!$F1 1283
8 TraesCS3B01G044100 chr3D 15347490 15349258 1768 True 2754.000000 2754 94.817000 1923 3687 1 chr3D.!!$R1 1764
9 TraesCS3B01G044100 chr3D 15359967 15361657 1690 True 1267.500000 1740 93.269500 176 1935 2 chr3D.!!$R5 1759
10 TraesCS3B01G044100 chr3D 15371125 15372580 1455 True 1247.000000 1247 82.606000 2288 3711 1 chr3D.!!$R2 1423
11 TraesCS3B01G044100 chr3D 15394653 15395936 1283 True 1190.000000 1190 83.836000 2304 3562 1 chr3D.!!$R3 1258
12 TraesCS3B01G044100 chr4A 611268582 611271614 3032 True 769.500000 1029 80.428000 1009 3576 2 chr4A.!!$R3 2567
13 TraesCS3B01G044100 chr4B 41754797 41755370 573 True 989.000000 989 97.735000 3983 4556 1 chr4B.!!$R1 573
14 TraesCS3B01G044100 chr4B 573521929 573522498 569 False 981.000000 981 97.719000 3987 4556 1 chr4B.!!$F2 569
15 TraesCS3B01G044100 chr4B 467882628 467883204 576 True 977.000000 977 97.232000 3977 4554 1 chr4B.!!$R3 577
16 TraesCS3B01G044100 chr4B 184137735 184138304 569 False 976.000000 976 97.548000 3986 4556 1 chr4B.!!$F1 570
17 TraesCS3B01G044100 chr2B 262403400 262403966 566 True 987.000000 987 98.060000 3990 4556 1 chr2B.!!$R1 566
18 TraesCS3B01G044100 chr2B 439958694 439959269 575 True 981.000000 981 97.396000 3981 4556 1 chr2B.!!$R2 575
19 TraesCS3B01G044100 chr1B 551293580 551294149 569 True 987.000000 987 97.895000 3987 4556 1 chr1B.!!$R1 569
20 TraesCS3B01G044100 chr1B 566896917 566897483 566 True 981.000000 981 97.884000 3990 4556 1 chr1B.!!$R2 566
21 TraesCS3B01G044100 chr1B 609665557 609666127 570 True 977.000000 977 97.548000 3986 4556 1 chr1B.!!$R3 570
22 TraesCS3B01G044100 chr7B 621810618 621811183 565 True 985.000000 985 98.060000 3990 4556 1 chr7B.!!$R1 566
23 TraesCS3B01G044100 chr5B 33349330 33349898 568 True 985.000000 985 97.891000 3988 4556 1 chr5B.!!$R1 568
24 TraesCS3B01G044100 chr5B 704301290 704302120 830 False 525.000000 525 78.878000 965 1764 1 chr5B.!!$F1 799
25 TraesCS3B01G044100 chr6B 598839042 598839607 565 True 976.000000 976 97.711000 3989 4556 1 chr6B.!!$R2 567
26 TraesCS3B01G044100 chr5D 558345747 558348799 3052 True 672.500000 822 80.082000 1009 3741 2 chr5D.!!$R3 2732
27 TraesCS3B01G044100 chr7D 59414905 59415756 851 False 203.000000 259 85.972500 1982 2508 2 chr7D.!!$F4 526

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
761 5038 0.038744 AAAGTACTCCCTCCGTCCGA 59.961 55.000 0.0 0.0 0.0 4.55 F
762 5039 0.038744 AAGTACTCCCTCCGTCCGAA 59.961 55.000 0.0 0.0 0.0 4.30 F
763 5040 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.000 0.0 0.0 0.0 3.46 F
773 5050 0.170339 CCGTCCGAAAAATCTTGCCC 59.830 55.000 0.0 0.0 0.0 5.36 F
1125 5421 0.981943 CCTCTTCCCCGGTACACTTT 59.018 55.000 0.0 0.0 0.0 2.66 F
1756 6070 1.214589 CCGACGACTCCGACCAAAT 59.785 57.895 0.0 0.0 39.5 2.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2269 8241 0.991920 TTAGGCTCTTCCCCACCTTG 59.008 55.000 0.00 0.00 33.60 3.61 R
2374 8350 8.527810 ACTTCATTTTTAAACTCAGTGAAACCA 58.472 29.630 0.00 0.00 37.80 3.67 R
2602 8581 9.559958 CGCAGAACTGATAGAAATAACATTTTT 57.440 29.630 5.97 0.00 0.00 1.94 R
2784 8851 4.433615 TCTCGAAGTATGACAAGCAATCC 58.566 43.478 0.00 0.00 0.00 3.01 R
3034 9123 1.480219 GACGCCCTTCGAAGCATACG 61.480 60.000 19.99 19.43 41.67 3.06 R
3761 9873 0.032952 GCGTGGGTGTAGAACAGACA 59.967 55.000 0.00 0.00 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 4.633565 CAGATTCAAGTGAAAGCTACTCCC 59.366 45.833 0.00 0.00 37.61 4.30
25 26 4.534103 AGATTCAAGTGAAAGCTACTCCCT 59.466 41.667 0.00 0.00 37.61 4.20
26 27 3.963428 TCAAGTGAAAGCTACTCCCTC 57.037 47.619 0.00 0.00 0.00 4.30
27 28 2.567615 TCAAGTGAAAGCTACTCCCTCC 59.432 50.000 0.00 0.00 0.00 4.30
28 29 2.569404 CAAGTGAAAGCTACTCCCTCCT 59.431 50.000 0.00 0.00 0.00 3.69
29 30 2.909217 AGTGAAAGCTACTCCCTCCTT 58.091 47.619 0.00 0.00 0.00 3.36
30 31 2.835156 AGTGAAAGCTACTCCCTCCTTC 59.165 50.000 0.00 0.00 0.00 3.46
33 34 3.012502 TGAAAGCTACTCCCTCCTTCCTA 59.987 47.826 0.00 0.00 0.00 2.94
34 35 3.778622 AAGCTACTCCCTCCTTCCTAA 57.221 47.619 0.00 0.00 0.00 2.69
35 36 3.778622 AGCTACTCCCTCCTTCCTAAA 57.221 47.619 0.00 0.00 0.00 1.85
36 37 4.288324 AGCTACTCCCTCCTTCCTAAAT 57.712 45.455 0.00 0.00 0.00 1.40
37 38 5.420215 AGCTACTCCCTCCTTCCTAAATA 57.580 43.478 0.00 0.00 0.00 1.40
38 39 5.983608 AGCTACTCCCTCCTTCCTAAATAT 58.016 41.667 0.00 0.00 0.00 1.28
40 41 7.724374 AGCTACTCCCTCCTTCCTAAATATAT 58.276 38.462 0.00 0.00 0.00 0.86
41 42 8.857997 AGCTACTCCCTCCTTCCTAAATATATA 58.142 37.037 0.00 0.00 0.00 0.86
42 43 9.663365 GCTACTCCCTCCTTCCTAAATATATAT 57.337 37.037 0.00 0.00 0.00 0.86
67 68 8.575649 TCCTTTTAGATTTCAAATGGACTACC 57.424 34.615 0.00 0.00 35.45 3.18
85 86 9.788889 TGGACTACCACATACGGATATATATAG 57.211 37.037 0.00 0.00 41.77 1.31
121 122 8.897752 AGAGTATAAATTCACTCATTTTGCTCC 58.102 33.333 13.99 0.00 42.99 4.70
122 123 7.697691 AGTATAAATTCACTCATTTTGCTCCG 58.302 34.615 0.00 0.00 0.00 4.63
124 125 5.957842 AAATTCACTCATTTTGCTCCGTA 57.042 34.783 0.00 0.00 0.00 4.02
125 126 6.515272 AAATTCACTCATTTTGCTCCGTAT 57.485 33.333 0.00 0.00 0.00 3.06
126 127 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
127 128 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
128 129 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
129 130 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
130 131 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
131 132 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
132 133 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
134 135 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
135 136 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
136 137 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
137 138 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
139 140 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
140 141 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
141 142 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
142 143 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
144 145 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
145 146 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
146 147 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
147 148 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
148 149 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
149 150 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
150 151 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
151 152 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
152 153 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
153 154 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
156 157 9.613428 TCACTTGTTGAAATCTCTAGAAAGAAA 57.387 29.630 0.00 0.00 0.00 2.52
175 1715 8.873186 AAAGAAAAATATTTAGGAACGGAGGA 57.127 30.769 0.01 0.00 0.00 3.71
198 4456 7.284489 AGGAAGTAGAAATTTAGCAAACACACA 59.716 33.333 0.00 0.00 0.00 3.72
238 4496 3.655384 ACCAAGGTTCTATCCTCCCTAC 58.345 50.000 0.00 0.00 36.74 3.18
320 4580 1.076332 GTTCGTCCACCCTTTCATCG 58.924 55.000 0.00 0.00 0.00 3.84
402 4663 6.232692 TGAAAACCACCGTAACTATAAAGCT 58.767 36.000 0.00 0.00 0.00 3.74
403 4664 6.711645 TGAAAACCACCGTAACTATAAAGCTT 59.288 34.615 0.00 0.00 0.00 3.74
717 4994 3.424703 AGTAATGTGCCTTTCAGTGCAT 58.575 40.909 0.00 0.00 40.07 3.96
748 5025 2.030701 TGCGTTGGTCGTTTCAAAGTAC 59.969 45.455 0.00 0.00 42.13 2.73
749 5026 2.286025 GCGTTGGTCGTTTCAAAGTACT 59.714 45.455 0.00 0.00 42.13 2.73
750 5027 3.603173 GCGTTGGTCGTTTCAAAGTACTC 60.603 47.826 0.00 0.00 42.13 2.59
751 5028 3.060070 CGTTGGTCGTTTCAAAGTACTCC 60.060 47.826 0.00 0.00 34.52 3.85
752 5029 3.116079 TGGTCGTTTCAAAGTACTCCC 57.884 47.619 0.00 0.00 0.00 4.30
753 5030 2.701951 TGGTCGTTTCAAAGTACTCCCT 59.298 45.455 0.00 0.00 0.00 4.20
754 5031 3.243975 TGGTCGTTTCAAAGTACTCCCTC 60.244 47.826 0.00 0.00 0.00 4.30
755 5032 3.324117 GTCGTTTCAAAGTACTCCCTCC 58.676 50.000 0.00 0.00 0.00 4.30
756 5033 2.029649 TCGTTTCAAAGTACTCCCTCCG 60.030 50.000 0.00 0.00 0.00 4.63
757 5034 2.288640 CGTTTCAAAGTACTCCCTCCGT 60.289 50.000 0.00 0.00 0.00 4.69
758 5035 3.324117 GTTTCAAAGTACTCCCTCCGTC 58.676 50.000 0.00 0.00 0.00 4.79
759 5036 1.553706 TCAAAGTACTCCCTCCGTCC 58.446 55.000 0.00 0.00 0.00 4.79
760 5037 0.172803 CAAAGTACTCCCTCCGTCCG 59.827 60.000 0.00 0.00 0.00 4.79
761 5038 0.038744 AAAGTACTCCCTCCGTCCGA 59.961 55.000 0.00 0.00 0.00 4.55
762 5039 0.038744 AAGTACTCCCTCCGTCCGAA 59.961 55.000 0.00 0.00 0.00 4.30
763 5040 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
764 5041 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
765 5042 1.273327 GTACTCCCTCCGTCCGAAAAA 59.727 52.381 0.00 0.00 0.00 1.94
766 5043 0.981943 ACTCCCTCCGTCCGAAAAAT 59.018 50.000 0.00 0.00 0.00 1.82
767 5044 1.066358 ACTCCCTCCGTCCGAAAAATC 60.066 52.381 0.00 0.00 0.00 2.17
768 5045 1.207329 CTCCCTCCGTCCGAAAAATCT 59.793 52.381 0.00 0.00 0.00 2.40
769 5046 1.626825 TCCCTCCGTCCGAAAAATCTT 59.373 47.619 0.00 0.00 0.00 2.40
770 5047 1.737793 CCCTCCGTCCGAAAAATCTTG 59.262 52.381 0.00 0.00 0.00 3.02
771 5048 1.130561 CCTCCGTCCGAAAAATCTTGC 59.869 52.381 0.00 0.00 0.00 4.01
772 5049 1.130561 CTCCGTCCGAAAAATCTTGCC 59.869 52.381 0.00 0.00 0.00 4.52
773 5050 0.170339 CCGTCCGAAAAATCTTGCCC 59.830 55.000 0.00 0.00 0.00 5.36
774 5051 0.170339 CGTCCGAAAAATCTTGCCCC 59.830 55.000 0.00 0.00 0.00 5.80
775 5052 1.545841 GTCCGAAAAATCTTGCCCCT 58.454 50.000 0.00 0.00 0.00 4.79
776 5053 1.472878 GTCCGAAAAATCTTGCCCCTC 59.527 52.381 0.00 0.00 0.00 4.30
777 5054 1.074727 TCCGAAAAATCTTGCCCCTCA 59.925 47.619 0.00 0.00 0.00 3.86
789 5066 1.342975 TGCCCCTCAGTGCTAGATACA 60.343 52.381 0.00 0.00 0.00 2.29
790 5067 1.974236 GCCCCTCAGTGCTAGATACAT 59.026 52.381 0.00 0.00 0.00 2.29
791 5068 2.028567 GCCCCTCAGTGCTAGATACATC 60.029 54.545 0.00 0.00 0.00 3.06
792 5069 3.505386 CCCCTCAGTGCTAGATACATCT 58.495 50.000 0.00 0.00 40.86 2.90
793 5070 4.667573 CCCCTCAGTGCTAGATACATCTA 58.332 47.826 0.00 0.00 38.32 1.98
794 5071 5.268387 CCCCTCAGTGCTAGATACATCTAT 58.732 45.833 0.00 0.00 38.60 1.98
795 5072 5.719085 CCCCTCAGTGCTAGATACATCTATT 59.281 44.000 0.00 0.00 38.60 1.73
796 5073 6.212388 CCCCTCAGTGCTAGATACATCTATTT 59.788 42.308 0.00 0.00 38.60 1.40
797 5074 7.095910 CCCTCAGTGCTAGATACATCTATTTG 58.904 42.308 0.00 0.00 38.60 2.32
798 5075 7.039434 CCCTCAGTGCTAGATACATCTATTTGA 60.039 40.741 0.00 2.30 38.60 2.69
799 5076 8.028354 CCTCAGTGCTAGATACATCTATTTGAG 58.972 40.741 0.00 14.65 38.60 3.02
800 5077 7.890515 TCAGTGCTAGATACATCTATTTGAGG 58.109 38.462 0.00 0.00 38.60 3.86
801 5078 7.039434 TCAGTGCTAGATACATCTATTTGAGGG 60.039 40.741 0.00 0.00 38.60 4.30
802 5079 7.013220 AGTGCTAGATACATCTATTTGAGGGA 58.987 38.462 0.00 0.00 38.60 4.20
803 5080 7.039363 AGTGCTAGATACATCTATTTGAGGGAC 60.039 40.741 0.00 0.00 38.60 4.46
804 5081 6.782494 TGCTAGATACATCTATTTGAGGGACA 59.218 38.462 0.00 0.00 38.60 4.02
805 5082 7.290014 TGCTAGATACATCTATTTGAGGGACAA 59.710 37.037 0.00 0.00 38.60 3.18
806 5083 7.816995 GCTAGATACATCTATTTGAGGGACAAG 59.183 40.741 0.00 0.00 38.60 3.16
807 5084 7.921041 AGATACATCTATTTGAGGGACAAGA 57.079 36.000 0.00 0.00 36.19 3.02
808 5085 8.503428 AGATACATCTATTTGAGGGACAAGAT 57.497 34.615 0.00 0.00 36.19 2.40
809 5086 8.943085 AGATACATCTATTTGAGGGACAAGATT 58.057 33.333 0.00 0.00 36.19 2.40
810 5087 9.566432 GATACATCTATTTGAGGGACAAGATTT 57.434 33.333 0.00 0.00 39.77 2.17
811 5088 9.927081 ATACATCTATTTGAGGGACAAGATTTT 57.073 29.630 0.00 0.00 39.77 1.82
812 5089 8.655935 ACATCTATTTGAGGGACAAGATTTTT 57.344 30.769 0.00 0.00 39.77 1.94
813 5090 8.526147 ACATCTATTTGAGGGACAAGATTTTTG 58.474 33.333 0.00 0.00 39.77 2.44
814 5091 8.742777 CATCTATTTGAGGGACAAGATTTTTGA 58.257 33.333 0.00 0.00 39.77 2.69
815 5092 8.340618 TCTATTTGAGGGACAAGATTTTTGAG 57.659 34.615 0.00 0.00 39.77 3.02
816 5093 5.789643 TTTGAGGGACAAGATTTTTGAGG 57.210 39.130 0.00 0.00 39.77 3.86
817 5094 3.766545 TGAGGGACAAGATTTTTGAGGG 58.233 45.455 0.00 0.00 0.00 4.30
1062 5358 2.279918 GCACCCGACGTGTTCTGT 60.280 61.111 0.00 0.00 44.97 3.41
1125 5421 0.981943 CCTCTTCCCCGGTACACTTT 59.018 55.000 0.00 0.00 0.00 2.66
1200 5496 3.823330 GGCGACGTCCTCGATGGT 61.823 66.667 10.58 0.00 46.14 3.55
1359 5661 4.828296 ACGGGAGGGTACGGCGAT 62.828 66.667 16.62 0.00 0.00 4.58
1395 5697 3.005554 CGAGCAGTGGAACATCAAGAAT 58.994 45.455 0.00 0.00 44.52 2.40
1458 5772 2.745698 CTGCTGGTGGAGACTGCA 59.254 61.111 0.00 0.00 33.10 4.41
1702 6016 3.903876 GCGTATCGGTTCTACGACA 57.096 52.632 7.02 0.00 46.64 4.35
1756 6070 1.214589 CCGACGACTCCGACCAAAT 59.785 57.895 0.00 0.00 39.50 2.32
1842 6280 5.117355 TCTTCAATTGTTACTCTCGTCGT 57.883 39.130 5.13 0.00 0.00 4.34
1966 7366 8.383318 AGTGGTAATTATGTTATGCTGATGAC 57.617 34.615 0.00 0.00 0.00 3.06
2054 7465 2.877097 TTGAACAGCTATTGGAGGCA 57.123 45.000 0.00 0.00 0.00 4.75
2063 7474 4.458989 CAGCTATTGGAGGCAACAAGTAAA 59.541 41.667 0.00 0.00 41.41 2.01
2111 7522 1.614317 GGTGGCTTTGGTGCTGTCTAT 60.614 52.381 0.00 0.00 0.00 1.98
2258 8230 4.576879 ACTTTTAAACGGGAGAGGATGAC 58.423 43.478 0.00 0.00 0.00 3.06
2269 8241 4.262678 GGGAGAGGATGACTAATTACAGCC 60.263 50.000 2.87 2.87 42.05 4.85
2374 8350 3.755378 GACTTGCTTCACATTCAGGACAT 59.245 43.478 0.00 0.00 0.00 3.06
2784 8851 7.268586 ACTCCATTACTTACATAAGCACTCTG 58.731 38.462 0.00 0.00 36.79 3.35
2800 8867 4.511527 CACTCTGGATTGCTTGTCATACT 58.488 43.478 0.00 0.00 0.00 2.12
2921 8988 2.229302 AGGCGACACTACAAGAAGAGTC 59.771 50.000 0.00 0.00 34.78 3.36
3034 9123 2.052104 GTGGTTACATGGCCCCTGC 61.052 63.158 0.00 0.00 0.00 4.85
3084 9173 4.954092 AAATCCGATGTCTTCAGCTTTC 57.046 40.909 0.00 0.00 0.00 2.62
3199 9296 1.265095 CACACGAGCTTCAACTTGCAT 59.735 47.619 0.00 0.00 0.00 3.96
3253 9359 9.956640 ATTTTTATTAATGGGATTGCAAACAGA 57.043 25.926 1.71 0.00 0.00 3.41
3409 9515 4.924305 CCAACCATGGGAGATATTGTTG 57.076 45.455 18.09 7.78 43.51 3.33
3492 9598 2.637165 AGGGTGGGAAATGAAGAGACT 58.363 47.619 0.00 0.00 0.00 3.24
3696 9808 8.283291 CCAATAGATATAAAAGAACGCTTCCAC 58.717 37.037 0.00 0.00 31.82 4.02
3712 9824 3.587797 TCCACGCTAGTTGGAGTAAAG 57.412 47.619 10.33 0.00 0.00 1.85
3717 9829 4.567159 CACGCTAGTTGGAGTAAAGAATCC 59.433 45.833 0.00 0.00 36.05 3.01
3722 9834 2.678336 GTTGGAGTAAAGAATCCGCTGG 59.322 50.000 0.00 0.00 38.52 4.85
3729 9841 1.545841 AAGAATCCGCTGGTTTTCCC 58.454 50.000 0.00 0.00 39.73 3.97
3735 9847 2.981302 GCTGGTTTTCCCATGCCC 59.019 61.111 0.00 0.00 44.15 5.36
3753 9865 4.473444 TGCCCTTGATCATATTTCCCTTC 58.527 43.478 0.00 0.00 0.00 3.46
3754 9866 3.829026 GCCCTTGATCATATTTCCCTTCC 59.171 47.826 0.00 0.00 0.00 3.46
3755 9867 4.411013 CCCTTGATCATATTTCCCTTCCC 58.589 47.826 0.00 0.00 0.00 3.97
3756 9868 4.074970 CCTTGATCATATTTCCCTTCCCG 58.925 47.826 0.00 0.00 0.00 5.14
3757 9869 3.788227 TGATCATATTTCCCTTCCCGG 57.212 47.619 0.00 0.00 0.00 5.73
3766 9878 2.347490 CCTTCCCGGGTGTGTCTG 59.653 66.667 22.86 3.89 0.00 3.51
3767 9879 2.516888 CCTTCCCGGGTGTGTCTGT 61.517 63.158 22.86 0.00 0.00 3.41
3768 9880 1.450211 CTTCCCGGGTGTGTCTGTT 59.550 57.895 22.86 0.00 0.00 3.16
3769 9881 0.602905 CTTCCCGGGTGTGTCTGTTC 60.603 60.000 22.86 0.00 0.00 3.18
3770 9882 1.052124 TTCCCGGGTGTGTCTGTTCT 61.052 55.000 22.86 0.00 0.00 3.01
3771 9883 0.178955 TCCCGGGTGTGTCTGTTCTA 60.179 55.000 22.86 0.00 0.00 2.10
3772 9884 0.037605 CCCGGGTGTGTCTGTTCTAC 60.038 60.000 14.18 0.00 0.00 2.59
3773 9885 0.677288 CCGGGTGTGTCTGTTCTACA 59.323 55.000 0.00 0.00 0.00 2.74
3774 9886 1.604693 CCGGGTGTGTCTGTTCTACAC 60.605 57.143 0.00 0.00 45.96 2.90
3777 9889 2.902705 GTGTGTCTGTTCTACACCCA 57.097 50.000 4.09 0.00 45.33 4.51
3778 9890 2.480845 GTGTGTCTGTTCTACACCCAC 58.519 52.381 4.09 0.00 45.33 4.61
3779 9891 1.067974 TGTGTCTGTTCTACACCCACG 59.932 52.381 4.09 0.00 45.33 4.94
3780 9892 0.032952 TGTCTGTTCTACACCCACGC 59.967 55.000 0.00 0.00 0.00 5.34
3781 9893 0.032952 GTCTGTTCTACACCCACGCA 59.967 55.000 0.00 0.00 0.00 5.24
3782 9894 0.032952 TCTGTTCTACACCCACGCAC 59.967 55.000 0.00 0.00 0.00 5.34
3783 9895 0.249699 CTGTTCTACACCCACGCACA 60.250 55.000 0.00 0.00 0.00 4.57
3784 9896 0.394938 TGTTCTACACCCACGCACAT 59.605 50.000 0.00 0.00 0.00 3.21
3785 9897 1.202710 TGTTCTACACCCACGCACATT 60.203 47.619 0.00 0.00 0.00 2.71
3786 9898 1.196808 GTTCTACACCCACGCACATTG 59.803 52.381 0.00 0.00 0.00 2.82
3787 9899 0.394938 TCTACACCCACGCACATTGT 59.605 50.000 0.00 0.00 0.00 2.71
3788 9900 1.619332 TCTACACCCACGCACATTGTA 59.381 47.619 0.00 0.00 0.00 2.41
3789 9901 1.730064 CTACACCCACGCACATTGTAC 59.270 52.381 0.00 0.00 0.00 2.90
3790 9902 0.887387 ACACCCACGCACATTGTACC 60.887 55.000 0.00 0.00 0.00 3.34
3791 9903 1.302993 ACCCACGCACATTGTACCC 60.303 57.895 0.00 0.00 0.00 3.69
3792 9904 2.043980 CCCACGCACATTGTACCCC 61.044 63.158 0.00 0.00 0.00 4.95
3793 9905 1.002624 CCACGCACATTGTACCCCT 60.003 57.895 0.00 0.00 0.00 4.79
3794 9906 1.305219 CCACGCACATTGTACCCCTG 61.305 60.000 0.00 0.00 0.00 4.45
3795 9907 1.002624 ACGCACATTGTACCCCTGG 60.003 57.895 0.00 0.00 0.00 4.45
3796 9908 1.002624 CGCACATTGTACCCCTGGT 60.003 57.895 0.00 0.00 40.16 4.00
3797 9909 1.305219 CGCACATTGTACCCCTGGTG 61.305 60.000 0.00 0.00 36.19 4.17
3798 9910 1.595093 GCACATTGTACCCCTGGTGC 61.595 60.000 0.00 0.00 43.78 5.01
3799 9911 0.251121 CACATTGTACCCCTGGTGCA 60.251 55.000 0.00 0.00 45.91 4.57
3802 9914 3.253838 TGTACCCCTGGTGCACCC 61.254 66.667 32.62 15.77 42.97 4.61
3803 9915 3.253838 GTACCCCTGGTGCACCCA 61.254 66.667 32.62 19.12 42.51 4.51
3804 9916 3.253838 TACCCCTGGTGCACCCAC 61.254 66.667 32.62 9.14 38.72 4.61
3807 9919 4.033776 CCCTGGTGCACCCACGAT 62.034 66.667 32.62 0.00 43.00 3.73
3808 9920 2.436646 CCTGGTGCACCCACGATC 60.437 66.667 32.62 6.75 43.00 3.69
3809 9921 2.347114 CTGGTGCACCCACGATCA 59.653 61.111 32.62 11.58 43.00 2.92
3810 9922 1.302431 CTGGTGCACCCACGATCAA 60.302 57.895 32.62 10.79 43.00 2.57
3811 9923 0.888736 CTGGTGCACCCACGATCAAA 60.889 55.000 32.62 10.02 43.00 2.69
3812 9924 0.466372 TGGTGCACCCACGATCAAAA 60.466 50.000 32.62 7.31 43.00 2.44
3813 9925 0.671251 GGTGCACCCACGATCAAAAA 59.329 50.000 26.31 0.00 43.00 1.94
3814 9926 1.272212 GGTGCACCCACGATCAAAAAT 59.728 47.619 26.31 0.00 43.00 1.82
3815 9927 2.288763 GGTGCACCCACGATCAAAAATT 60.289 45.455 26.31 0.00 43.00 1.82
3816 9928 3.389221 GTGCACCCACGATCAAAAATTT 58.611 40.909 5.22 0.00 31.34 1.82
3817 9929 4.551388 GTGCACCCACGATCAAAAATTTA 58.449 39.130 5.22 0.00 31.34 1.40
3818 9930 4.621034 GTGCACCCACGATCAAAAATTTAG 59.379 41.667 5.22 0.00 31.34 1.85
3819 9931 3.612423 GCACCCACGATCAAAAATTTAGC 59.388 43.478 0.00 0.00 0.00 3.09
3820 9932 4.804108 CACCCACGATCAAAAATTTAGCA 58.196 39.130 0.00 0.00 0.00 3.49
3821 9933 5.226396 CACCCACGATCAAAAATTTAGCAA 58.774 37.500 0.00 0.00 0.00 3.91
3822 9934 5.694006 CACCCACGATCAAAAATTTAGCAAA 59.306 36.000 0.00 0.00 0.00 3.68
3823 9935 6.201806 CACCCACGATCAAAAATTTAGCAAAA 59.798 34.615 0.00 0.00 0.00 2.44
3824 9936 6.201997 ACCCACGATCAAAAATTTAGCAAAAC 59.798 34.615 0.00 0.00 0.00 2.43
3825 9937 6.201806 CCCACGATCAAAAATTTAGCAAAACA 59.798 34.615 0.00 0.00 0.00 2.83
3826 9938 7.095271 CCCACGATCAAAAATTTAGCAAAACAT 60.095 33.333 0.00 0.00 0.00 2.71
3827 9939 7.951565 CCACGATCAAAAATTTAGCAAAACATC 59.048 33.333 0.00 0.00 0.00 3.06
3828 9940 8.702438 CACGATCAAAAATTTAGCAAAACATCT 58.298 29.630 0.00 0.00 0.00 2.90
3829 9941 8.702438 ACGATCAAAAATTTAGCAAAACATCTG 58.298 29.630 0.00 0.00 0.00 2.90
3830 9942 8.914654 CGATCAAAAATTTAGCAAAACATCTGA 58.085 29.630 0.00 0.00 0.00 3.27
3840 9952 9.467258 TTTAGCAAAACATCTGAAAAGAATCTG 57.533 29.630 0.00 0.00 0.00 2.90
3841 9953 7.281040 AGCAAAACATCTGAAAAGAATCTGA 57.719 32.000 0.00 0.00 0.00 3.27
3842 9954 7.719483 AGCAAAACATCTGAAAAGAATCTGAA 58.281 30.769 0.00 0.00 32.11 3.02
3843 9955 8.199449 AGCAAAACATCTGAAAAGAATCTGAAA 58.801 29.630 0.00 0.00 32.11 2.69
3844 9956 8.271487 GCAAAACATCTGAAAAGAATCTGAAAC 58.729 33.333 0.00 0.00 32.11 2.78
3845 9957 9.525409 CAAAACATCTGAAAAGAATCTGAAACT 57.475 29.630 0.00 0.00 32.11 2.66
3848 9960 9.525409 AACATCTGAAAAGAATCTGAAACTTTG 57.475 29.630 11.22 4.20 34.70 2.77
3849 9961 8.689972 ACATCTGAAAAGAATCTGAAACTTTGT 58.310 29.630 11.22 4.65 34.70 2.83
3850 9962 8.965172 CATCTGAAAAGAATCTGAAACTTTGTG 58.035 33.333 11.22 6.83 34.70 3.33
3851 9963 7.483307 TCTGAAAAGAATCTGAAACTTTGTGG 58.517 34.615 11.22 6.59 34.70 4.17
3852 9964 7.339212 TCTGAAAAGAATCTGAAACTTTGTGGA 59.661 33.333 11.22 8.07 34.70 4.02
3853 9965 8.010733 TGAAAAGAATCTGAAACTTTGTGGAT 57.989 30.769 11.22 0.00 34.70 3.41
3854 9966 7.922278 TGAAAAGAATCTGAAACTTTGTGGATG 59.078 33.333 11.22 0.00 34.70 3.51
3855 9967 6.966534 AAGAATCTGAAACTTTGTGGATGT 57.033 33.333 0.00 0.00 0.00 3.06
3856 9968 6.323203 AGAATCTGAAACTTTGTGGATGTG 57.677 37.500 0.00 0.00 0.00 3.21
3857 9969 6.064060 AGAATCTGAAACTTTGTGGATGTGA 58.936 36.000 0.00 0.00 0.00 3.58
3858 9970 6.718454 AGAATCTGAAACTTTGTGGATGTGAT 59.282 34.615 0.00 0.00 0.00 3.06
3859 9971 6.906157 ATCTGAAACTTTGTGGATGTGATT 57.094 33.333 0.00 0.00 0.00 2.57
3860 9972 8.408043 AATCTGAAACTTTGTGGATGTGATTA 57.592 30.769 0.00 0.00 0.00 1.75
3861 9973 8.585471 ATCTGAAACTTTGTGGATGTGATTAT 57.415 30.769 0.00 0.00 0.00 1.28
3862 9974 7.819644 TCTGAAACTTTGTGGATGTGATTATG 58.180 34.615 0.00 0.00 0.00 1.90
3863 9975 7.665145 TCTGAAACTTTGTGGATGTGATTATGA 59.335 33.333 0.00 0.00 0.00 2.15
3864 9976 7.819644 TGAAACTTTGTGGATGTGATTATGAG 58.180 34.615 0.00 0.00 0.00 2.90
3865 9977 5.824904 ACTTTGTGGATGTGATTATGAGC 57.175 39.130 0.00 0.00 0.00 4.26
3866 9978 5.255687 ACTTTGTGGATGTGATTATGAGCA 58.744 37.500 0.00 0.00 0.00 4.26
3867 9979 5.711506 ACTTTGTGGATGTGATTATGAGCAA 59.288 36.000 0.00 0.00 0.00 3.91
3868 9980 6.209192 ACTTTGTGGATGTGATTATGAGCAAA 59.791 34.615 0.00 0.00 0.00 3.68
3869 9981 6.778834 TTGTGGATGTGATTATGAGCAAAT 57.221 33.333 0.00 0.00 0.00 2.32
3870 9982 6.139048 TGTGGATGTGATTATGAGCAAATG 57.861 37.500 0.00 0.00 0.00 2.32
3871 9983 5.653330 TGTGGATGTGATTATGAGCAAATGT 59.347 36.000 0.00 0.00 0.00 2.71
3872 9984 6.153170 TGTGGATGTGATTATGAGCAAATGTT 59.847 34.615 0.00 0.00 0.00 2.71
3873 9985 7.037438 GTGGATGTGATTATGAGCAAATGTTT 58.963 34.615 0.00 0.00 0.00 2.83
3874 9986 7.546667 GTGGATGTGATTATGAGCAAATGTTTT 59.453 33.333 0.00 0.00 0.00 2.43
3875 9987 8.747471 TGGATGTGATTATGAGCAAATGTTTTA 58.253 29.630 0.00 0.00 0.00 1.52
3876 9988 9.241317 GGATGTGATTATGAGCAAATGTTTTAG 57.759 33.333 0.00 0.00 0.00 1.85
3877 9989 9.241317 GATGTGATTATGAGCAAATGTTTTAGG 57.759 33.333 0.00 0.00 0.00 2.69
3878 9990 8.121305 TGTGATTATGAGCAAATGTTTTAGGT 57.879 30.769 0.00 0.00 0.00 3.08
3879 9991 8.028354 TGTGATTATGAGCAAATGTTTTAGGTG 58.972 33.333 0.00 0.00 0.00 4.00
3880 9992 7.009540 GTGATTATGAGCAAATGTTTTAGGTGC 59.990 37.037 0.00 0.00 35.41 5.01
3882 9994 4.935352 TGAGCAAATGTTTTAGGTGCTT 57.065 36.364 0.00 0.00 45.24 3.91
3883 9995 4.619973 TGAGCAAATGTTTTAGGTGCTTG 58.380 39.130 0.00 0.00 45.24 4.01
3884 9996 3.392882 AGCAAATGTTTTAGGTGCTTGC 58.607 40.909 0.00 0.00 42.77 4.01
3885 9997 3.129871 GCAAATGTTTTAGGTGCTTGCA 58.870 40.909 0.00 0.00 38.03 4.08
3886 9998 3.559242 GCAAATGTTTTAGGTGCTTGCAA 59.441 39.130 0.00 0.00 38.03 4.08
3887 9999 4.318974 GCAAATGTTTTAGGTGCTTGCAAG 60.319 41.667 22.44 22.44 38.03 4.01
3888 10000 4.935352 AATGTTTTAGGTGCTTGCAAGA 57.065 36.364 30.39 12.25 0.00 3.02
3889 10001 5.473066 AATGTTTTAGGTGCTTGCAAGAT 57.527 34.783 30.39 13.92 0.00 2.40
3890 10002 4.503741 TGTTTTAGGTGCTTGCAAGATC 57.496 40.909 30.39 19.51 0.00 2.75
3891 10003 4.144297 TGTTTTAGGTGCTTGCAAGATCT 58.856 39.130 30.39 22.23 0.00 2.75
3892 10004 5.312895 TGTTTTAGGTGCTTGCAAGATCTA 58.687 37.500 30.39 21.29 0.00 1.98
3893 10005 5.767665 TGTTTTAGGTGCTTGCAAGATCTAA 59.232 36.000 30.39 24.92 0.00 2.10
3894 10006 6.072508 TGTTTTAGGTGCTTGCAAGATCTAAG 60.073 38.462 30.39 2.33 0.00 2.18
3895 10007 2.996631 AGGTGCTTGCAAGATCTAAGG 58.003 47.619 30.39 1.83 0.00 2.69
3896 10008 2.573462 AGGTGCTTGCAAGATCTAAGGA 59.427 45.455 30.39 0.00 0.00 3.36
3897 10009 3.009473 AGGTGCTTGCAAGATCTAAGGAA 59.991 43.478 30.39 0.00 0.00 3.36
3898 10010 3.758554 GGTGCTTGCAAGATCTAAGGAAA 59.241 43.478 30.39 0.00 0.00 3.13
3899 10011 4.400567 GGTGCTTGCAAGATCTAAGGAAAT 59.599 41.667 30.39 0.00 0.00 2.17
3900 10012 5.590259 GGTGCTTGCAAGATCTAAGGAAATA 59.410 40.000 30.39 0.00 0.00 1.40
3901 10013 6.264067 GGTGCTTGCAAGATCTAAGGAAATAT 59.736 38.462 30.39 0.00 0.00 1.28
3902 10014 7.137426 GTGCTTGCAAGATCTAAGGAAATATG 58.863 38.462 30.39 0.00 0.00 1.78
3903 10015 6.830324 TGCTTGCAAGATCTAAGGAAATATGT 59.170 34.615 30.39 0.00 0.00 2.29
3904 10016 7.992608 TGCTTGCAAGATCTAAGGAAATATGTA 59.007 33.333 30.39 0.00 0.00 2.29
3905 10017 9.007901 GCTTGCAAGATCTAAGGAAATATGTAT 57.992 33.333 30.39 0.00 0.00 2.29
3932 10044 6.610741 AAAACAAAGTTTGTGCTCAAAACA 57.389 29.167 21.53 0.00 44.59 2.83
3933 10045 6.799926 AAACAAAGTTTGTGCTCAAAACAT 57.200 29.167 21.53 0.00 44.59 2.71
3934 10046 5.783100 ACAAAGTTTGTGCTCAAAACATG 57.217 34.783 20.26 14.78 43.78 3.21
3935 10047 5.237048 ACAAAGTTTGTGCTCAAAACATGT 58.763 33.333 20.26 15.31 43.78 3.21
3936 10048 5.120519 ACAAAGTTTGTGCTCAAAACATGTG 59.879 36.000 20.26 11.62 43.78 3.21
3937 10049 3.784338 AGTTTGTGCTCAAAACATGTGG 58.216 40.909 15.02 0.00 43.78 4.17
3938 10050 3.446873 AGTTTGTGCTCAAAACATGTGGA 59.553 39.130 15.02 0.00 43.78 4.02
3939 10051 3.435105 TTGTGCTCAAAACATGTGGAC 57.565 42.857 0.00 0.00 42.22 4.02
3940 10052 1.333308 TGTGCTCAAAACATGTGGACG 59.667 47.619 0.00 0.00 44.05 4.79
3941 10053 0.950836 TGCTCAAAACATGTGGACGG 59.049 50.000 0.00 0.00 0.00 4.79
3942 10054 0.951558 GCTCAAAACATGTGGACGGT 59.048 50.000 0.00 0.00 0.00 4.83
3943 10055 2.147958 GCTCAAAACATGTGGACGGTA 58.852 47.619 0.00 0.00 0.00 4.02
3944 10056 2.550606 GCTCAAAACATGTGGACGGTAA 59.449 45.455 0.00 0.00 0.00 2.85
3945 10057 3.608474 GCTCAAAACATGTGGACGGTAAC 60.608 47.826 0.00 0.00 0.00 2.50
3957 10069 4.144418 GGTAACGTGGGTGCACAA 57.856 55.556 20.43 2.82 0.00 3.33
3958 10070 1.650363 GGTAACGTGGGTGCACAAC 59.350 57.895 20.43 15.03 0.00 3.32
3959 10071 1.096386 GGTAACGTGGGTGCACAACA 61.096 55.000 20.43 14.26 0.00 3.33
3960 10072 0.948678 GTAACGTGGGTGCACAACAT 59.051 50.000 20.43 10.19 0.00 2.71
3961 10073 1.069500 GTAACGTGGGTGCACAACATC 60.069 52.381 20.43 10.35 0.00 3.06
3962 10074 0.749818 AACGTGGGTGCACAACATCA 60.750 50.000 20.43 5.62 0.00 3.07
3963 10075 0.537143 ACGTGGGTGCACAACATCAT 60.537 50.000 20.43 4.16 0.00 2.45
3964 10076 0.597568 CGTGGGTGCACAACATCATT 59.402 50.000 20.43 0.00 0.00 2.57
3965 10077 1.000385 CGTGGGTGCACAACATCATTT 60.000 47.619 20.43 0.00 0.00 2.32
3966 10078 2.406130 GTGGGTGCACAACATCATTTG 58.594 47.619 20.43 0.00 0.00 2.32
3967 10079 2.037901 TGGGTGCACAACATCATTTGT 58.962 42.857 20.43 0.00 40.46 2.83
3968 10080 3.005261 GTGGGTGCACAACATCATTTGTA 59.995 43.478 20.43 0.00 37.62 2.41
3969 10081 3.831333 TGGGTGCACAACATCATTTGTAT 59.169 39.130 20.43 0.00 37.62 2.29
3970 10082 4.282957 TGGGTGCACAACATCATTTGTATT 59.717 37.500 20.43 0.00 37.62 1.89
3971 10083 5.221601 TGGGTGCACAACATCATTTGTATTT 60.222 36.000 20.43 0.00 37.62 1.40
3972 10084 5.348451 GGGTGCACAACATCATTTGTATTTC 59.652 40.000 20.43 0.00 37.62 2.17
3973 10085 5.060816 GGTGCACAACATCATTTGTATTTCG 59.939 40.000 20.43 0.00 37.62 3.46
3974 10086 5.629020 GTGCACAACATCATTTGTATTTCGT 59.371 36.000 13.17 0.00 37.62 3.85
3975 10087 6.143758 GTGCACAACATCATTTGTATTTCGTT 59.856 34.615 13.17 0.00 37.62 3.85
3976 10088 6.699204 TGCACAACATCATTTGTATTTCGTTT 59.301 30.769 0.00 0.00 37.62 3.60
3977 10089 7.223582 TGCACAACATCATTTGTATTTCGTTTT 59.776 29.630 0.00 0.00 37.62 2.43
3978 10090 8.061268 GCACAACATCATTTGTATTTCGTTTTT 58.939 29.630 0.00 0.00 37.62 1.94
3979 10091 9.355736 CACAACATCATTTGTATTTCGTTTTTG 57.644 29.630 0.00 0.00 37.62 2.44
3980 10092 9.092876 ACAACATCATTTGTATTTCGTTTTTGT 57.907 25.926 0.00 0.00 37.96 2.83
4109 10221 0.618458 CCGGATGGGACTTTCCTTGA 59.382 55.000 0.00 0.00 38.47 3.02
4215 10327 6.147328 GTGTCTATATAAACCGGATGGCTTTC 59.853 42.308 9.46 0.00 39.70 2.62
4391 10503 1.892209 AAACATCGTGTCCCTTGTCC 58.108 50.000 0.00 0.00 0.00 4.02
4444 10556 2.197875 CCCCTACCCGAGATCCGT 59.802 66.667 0.00 0.00 36.31 4.69
4499 10611 0.674534 GTTCCTCTGTGTCGTCACCT 59.325 55.000 10.28 0.00 43.26 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 2.567615 GGAGGGAGTAGCTTTCACTTGA 59.432 50.000 4.40 0.00 0.00 3.02
7 8 2.569404 AGGAGGGAGTAGCTTTCACTTG 59.431 50.000 4.40 0.00 0.00 3.16
10 11 2.093394 GGAAGGAGGGAGTAGCTTTCAC 60.093 54.545 0.00 0.00 0.00 3.18
11 12 2.188817 GGAAGGAGGGAGTAGCTTTCA 58.811 52.381 0.00 0.00 0.00 2.69
12 13 2.473070 AGGAAGGAGGGAGTAGCTTTC 58.527 52.381 0.00 0.00 0.00 2.62
13 14 2.651642 AGGAAGGAGGGAGTAGCTTT 57.348 50.000 0.00 0.00 0.00 3.51
15 16 3.778622 TTTAGGAAGGAGGGAGTAGCT 57.221 47.619 0.00 0.00 0.00 3.32
16 17 7.981475 ATATATTTAGGAAGGAGGGAGTAGC 57.019 40.000 0.00 0.00 0.00 3.58
20 21 9.736819 AAGGATATATATTTAGGAAGGAGGGAG 57.263 37.037 0.00 0.00 0.00 4.30
41 42 9.190317 GGTAGTCCATTTGAAATCTAAAAGGAT 57.810 33.333 0.00 0.00 37.28 3.24
42 43 8.167392 TGGTAGTCCATTTGAAATCTAAAAGGA 58.833 33.333 0.00 0.00 39.03 3.36
43 44 8.244113 GTGGTAGTCCATTTGAAATCTAAAAGG 58.756 37.037 0.00 0.00 46.20 3.11
44 45 8.792633 TGTGGTAGTCCATTTGAAATCTAAAAG 58.207 33.333 0.00 0.00 46.20 2.27
47 48 9.391006 GTATGTGGTAGTCCATTTGAAATCTAA 57.609 33.333 0.00 0.00 46.20 2.10
49 50 6.538742 CGTATGTGGTAGTCCATTTGAAATCT 59.461 38.462 0.00 0.00 46.20 2.40
50 51 6.238374 CCGTATGTGGTAGTCCATTTGAAATC 60.238 42.308 0.00 0.00 46.20 2.17
51 52 5.588648 CCGTATGTGGTAGTCCATTTGAAAT 59.411 40.000 0.00 0.00 46.20 2.17
52 53 4.938832 CCGTATGTGGTAGTCCATTTGAAA 59.061 41.667 0.00 0.00 46.20 2.69
53 54 4.223255 TCCGTATGTGGTAGTCCATTTGAA 59.777 41.667 0.00 0.00 46.20 2.69
55 56 4.131649 TCCGTATGTGGTAGTCCATTTG 57.868 45.455 0.00 0.00 46.20 2.32
57 58 7.973048 ATATATCCGTATGTGGTAGTCCATT 57.027 36.000 0.00 0.00 46.20 3.16
59 60 9.788889 CTATATATATCCGTATGTGGTAGTCCA 57.211 37.037 0.00 0.00 42.05 4.02
95 96 8.897752 GGAGCAAAATGAGTGAATTTATACTCT 58.102 33.333 15.15 3.85 42.86 3.24
96 97 7.852945 CGGAGCAAAATGAGTGAATTTATACTC 59.147 37.037 10.00 10.00 42.77 2.59
97 98 7.336931 ACGGAGCAAAATGAGTGAATTTATACT 59.663 33.333 0.00 0.00 0.00 2.12
98 99 7.472543 ACGGAGCAAAATGAGTGAATTTATAC 58.527 34.615 0.00 0.00 0.00 1.47
99 100 7.624360 ACGGAGCAAAATGAGTGAATTTATA 57.376 32.000 0.00 0.00 0.00 0.98
100 101 6.515272 ACGGAGCAAAATGAGTGAATTTAT 57.485 33.333 0.00 0.00 0.00 1.40
102 103 4.853924 ACGGAGCAAAATGAGTGAATTT 57.146 36.364 0.00 0.00 0.00 1.82
103 104 5.415701 ACATACGGAGCAAAATGAGTGAATT 59.584 36.000 0.00 0.00 0.00 2.17
104 105 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
105 106 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
107 108 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
108 109 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
109 110 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
110 111 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
111 112 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
113 114 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
114 115 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
116 117 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
118 119 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
119 120 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
120 121 6.590292 AGATTTCAACAAGTGACTACATACGG 59.410 38.462 0.00 0.00 35.39 4.02
121 122 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
122 123 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
124 125 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
125 126 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
126 127 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
127 128 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
128 129 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
129 130 8.594881 TCTTTCTAGAGATTTCAACAAGTGAC 57.405 34.615 0.00 0.00 35.39 3.67
130 131 9.613428 TTTCTTTCTAGAGATTTCAACAAGTGA 57.387 29.630 0.00 0.00 0.00 3.41
148 149 8.957466 CCTCCGTTCCTAAATATTTTTCTTTCT 58.043 33.333 5.91 0.00 0.00 2.52
149 150 8.953313 TCCTCCGTTCCTAAATATTTTTCTTTC 58.047 33.333 5.91 0.00 0.00 2.62
150 151 8.873186 TCCTCCGTTCCTAAATATTTTTCTTT 57.127 30.769 5.91 0.00 0.00 2.52
151 152 8.873186 TTCCTCCGTTCCTAAATATTTTTCTT 57.127 30.769 5.91 0.00 0.00 2.52
152 153 8.107729 ACTTCCTCCGTTCCTAAATATTTTTCT 58.892 33.333 5.91 0.00 0.00 2.52
153 154 8.277490 ACTTCCTCCGTTCCTAAATATTTTTC 57.723 34.615 5.91 0.00 0.00 2.29
156 157 8.315220 TCTACTTCCTCCGTTCCTAAATATTT 57.685 34.615 5.89 5.89 0.00 1.40
157 158 7.909485 TCTACTTCCTCCGTTCCTAAATATT 57.091 36.000 0.00 0.00 0.00 1.28
159 160 7.722949 TTTCTACTTCCTCCGTTCCTAAATA 57.277 36.000 0.00 0.00 0.00 1.40
160 161 6.616237 TTTCTACTTCCTCCGTTCCTAAAT 57.384 37.500 0.00 0.00 0.00 1.40
161 162 6.616237 ATTTCTACTTCCTCCGTTCCTAAA 57.384 37.500 0.00 0.00 0.00 1.85
162 163 6.616237 AATTTCTACTTCCTCCGTTCCTAA 57.384 37.500 0.00 0.00 0.00 2.69
175 1715 7.700656 GTGTGTGTGTTTGCTAAATTTCTACTT 59.299 33.333 0.00 0.00 0.00 2.24
223 4481 1.630223 CCGGGTAGGGAGGATAGAAC 58.370 60.000 0.00 0.00 35.97 3.01
234 4492 3.071023 TCTTTCTTATCATGCCGGGTAGG 59.929 47.826 2.18 0.00 44.97 3.18
238 4496 3.475566 TCTCTTTCTTATCATGCCGGG 57.524 47.619 2.18 0.00 0.00 5.73
283 4543 5.784177 ACGAACAAATGAGCTAGAGAGAAA 58.216 37.500 0.00 0.00 0.00 2.52
581 4857 2.362077 GGCAGCATAATTTGTACCCCTG 59.638 50.000 0.00 0.00 0.00 4.45
717 4994 2.282110 CCAACGCACCCATCACCA 60.282 61.111 0.00 0.00 0.00 4.17
748 5025 1.207329 AGATTTTTCGGACGGAGGGAG 59.793 52.381 0.00 0.00 0.00 4.30
749 5026 1.272807 AGATTTTTCGGACGGAGGGA 58.727 50.000 0.00 0.00 0.00 4.20
750 5027 1.737793 CAAGATTTTTCGGACGGAGGG 59.262 52.381 0.00 0.00 0.00 4.30
751 5028 1.130561 GCAAGATTTTTCGGACGGAGG 59.869 52.381 0.00 0.00 0.00 4.30
752 5029 1.130561 GGCAAGATTTTTCGGACGGAG 59.869 52.381 0.00 0.00 0.00 4.63
753 5030 1.161843 GGCAAGATTTTTCGGACGGA 58.838 50.000 0.00 0.00 0.00 4.69
754 5031 0.170339 GGGCAAGATTTTTCGGACGG 59.830 55.000 0.00 0.00 0.00 4.79
755 5032 0.170339 GGGGCAAGATTTTTCGGACG 59.830 55.000 0.00 0.00 0.00 4.79
756 5033 1.472878 GAGGGGCAAGATTTTTCGGAC 59.527 52.381 0.00 0.00 0.00 4.79
757 5034 1.074727 TGAGGGGCAAGATTTTTCGGA 59.925 47.619 0.00 0.00 0.00 4.55
758 5035 1.474077 CTGAGGGGCAAGATTTTTCGG 59.526 52.381 0.00 0.00 0.00 4.30
759 5036 2.095059 CACTGAGGGGCAAGATTTTTCG 60.095 50.000 0.00 0.00 0.00 3.46
760 5037 2.353109 GCACTGAGGGGCAAGATTTTTC 60.353 50.000 0.00 0.00 0.00 2.29
761 5038 1.620323 GCACTGAGGGGCAAGATTTTT 59.380 47.619 0.00 0.00 0.00 1.94
762 5039 1.203100 AGCACTGAGGGGCAAGATTTT 60.203 47.619 1.40 0.00 0.00 1.82
763 5040 0.407139 AGCACTGAGGGGCAAGATTT 59.593 50.000 1.40 0.00 0.00 2.17
764 5041 1.211457 CTAGCACTGAGGGGCAAGATT 59.789 52.381 1.40 0.00 0.00 2.40
765 5042 0.835941 CTAGCACTGAGGGGCAAGAT 59.164 55.000 1.40 0.00 0.00 2.40
766 5043 0.252239 TCTAGCACTGAGGGGCAAGA 60.252 55.000 1.40 0.00 0.00 3.02
767 5044 0.835941 ATCTAGCACTGAGGGGCAAG 59.164 55.000 1.40 0.00 0.00 4.01
768 5045 1.762957 GTATCTAGCACTGAGGGGCAA 59.237 52.381 1.40 0.00 0.00 4.52
769 5046 1.342975 TGTATCTAGCACTGAGGGGCA 60.343 52.381 1.40 0.00 0.00 5.36
770 5047 1.414158 TGTATCTAGCACTGAGGGGC 58.586 55.000 0.00 0.00 0.00 5.80
771 5048 3.505386 AGATGTATCTAGCACTGAGGGG 58.495 50.000 0.00 0.00 34.85 4.79
772 5049 6.849085 AATAGATGTATCTAGCACTGAGGG 57.151 41.667 7.57 0.00 42.20 4.30
773 5050 7.890515 TCAAATAGATGTATCTAGCACTGAGG 58.109 38.462 7.57 0.00 42.20 3.86
774 5051 8.028354 CCTCAAATAGATGTATCTAGCACTGAG 58.972 40.741 16.13 16.13 42.20 3.35
775 5052 7.039434 CCCTCAAATAGATGTATCTAGCACTGA 60.039 40.741 7.57 6.39 42.20 3.41
776 5053 7.039434 TCCCTCAAATAGATGTATCTAGCACTG 60.039 40.741 7.57 3.16 42.20 3.66
777 5054 7.013220 TCCCTCAAATAGATGTATCTAGCACT 58.987 38.462 7.57 0.00 42.20 4.40
789 5066 8.884124 TCAAAAATCTTGTCCCTCAAATAGAT 57.116 30.769 0.00 0.00 35.48 1.98
790 5067 7.394359 CCTCAAAAATCTTGTCCCTCAAATAGA 59.606 37.037 0.00 0.00 35.48 1.98
791 5068 7.363268 CCCTCAAAAATCTTGTCCCTCAAATAG 60.363 40.741 0.00 0.00 35.48 1.73
792 5069 6.437162 CCCTCAAAAATCTTGTCCCTCAAATA 59.563 38.462 0.00 0.00 35.48 1.40
793 5070 5.246883 CCCTCAAAAATCTTGTCCCTCAAAT 59.753 40.000 0.00 0.00 35.48 2.32
794 5071 4.588528 CCCTCAAAAATCTTGTCCCTCAAA 59.411 41.667 0.00 0.00 35.48 2.69
795 5072 4.141041 TCCCTCAAAAATCTTGTCCCTCAA 60.141 41.667 0.00 0.00 34.61 3.02
796 5073 3.397618 TCCCTCAAAAATCTTGTCCCTCA 59.602 43.478 0.00 0.00 0.00 3.86
797 5074 4.013050 CTCCCTCAAAAATCTTGTCCCTC 58.987 47.826 0.00 0.00 0.00 4.30
798 5075 3.399305 ACTCCCTCAAAAATCTTGTCCCT 59.601 43.478 0.00 0.00 0.00 4.20
799 5076 3.767711 ACTCCCTCAAAAATCTTGTCCC 58.232 45.455 0.00 0.00 0.00 4.46
800 5077 6.004574 ACTTACTCCCTCAAAAATCTTGTCC 58.995 40.000 0.00 0.00 0.00 4.02
801 5078 8.794335 ATACTTACTCCCTCAAAAATCTTGTC 57.206 34.615 0.00 0.00 0.00 3.18
809 5086 9.457436 GGTCAATTAATACTTACTCCCTCAAAA 57.543 33.333 0.00 0.00 0.00 2.44
810 5087 8.050930 GGGTCAATTAATACTTACTCCCTCAAA 58.949 37.037 0.00 0.00 0.00 2.69
811 5088 7.183112 TGGGTCAATTAATACTTACTCCCTCAA 59.817 37.037 0.00 0.00 33.15 3.02
812 5089 6.674861 TGGGTCAATTAATACTTACTCCCTCA 59.325 38.462 0.00 0.00 33.15 3.86
813 5090 7.133133 TGGGTCAATTAATACTTACTCCCTC 57.867 40.000 0.00 0.00 33.15 4.30
814 5091 7.518188 CATGGGTCAATTAATACTTACTCCCT 58.482 38.462 0.00 0.00 33.15 4.20
815 5092 6.206829 GCATGGGTCAATTAATACTTACTCCC 59.793 42.308 0.00 0.00 0.00 4.30
816 5093 6.073222 CGCATGGGTCAATTAATACTTACTCC 60.073 42.308 0.68 0.00 0.00 3.85
817 5094 6.704493 TCGCATGGGTCAATTAATACTTACTC 59.296 38.462 9.86 0.00 0.00 2.59
1047 5343 1.066918 GTCACAGAACACGTCGGGT 59.933 57.895 0.00 0.00 0.00 5.28
1048 5344 0.528901 TTGTCACAGAACACGTCGGG 60.529 55.000 0.00 0.00 0.00 5.14
1062 5358 0.948623 CGATGGCCTTGACGTTGTCA 60.949 55.000 3.32 0.00 41.09 3.58
1125 5421 4.597032 CCAAAGGTCTTGGTGGCA 57.403 55.556 0.00 0.00 34.92 4.92
1359 5661 3.636313 CTCGAAGGGCGGCGTGTTA 62.636 63.158 9.37 0.00 41.33 2.41
1458 5772 4.021925 GTGGTGGCCGCCTTCTCT 62.022 66.667 34.52 0.00 0.00 3.10
1533 5847 1.677552 CGCCTGGGAGTACACCTTT 59.322 57.895 9.34 0.00 0.00 3.11
1842 6280 3.551846 ACCTTTTCTTCGCCTTTTGAGA 58.448 40.909 0.00 0.00 0.00 3.27
1966 7366 4.591072 CCTCTCTCCCTAAATTCCACTAGG 59.409 50.000 0.00 0.00 35.39 3.02
2015 7426 6.106877 TCAAAGTGAAACAAAGAGAACTCG 57.893 37.500 0.00 0.00 41.43 4.18
2111 7522 7.842743 ACCTCATAGACCTACAAATGTACCTTA 59.157 37.037 0.00 0.00 0.00 2.69
2163 7963 6.934056 ACAAGAGATCATATTAGGCAGCTAG 58.066 40.000 0.00 0.00 0.00 3.42
2168 7968 9.494271 GTTTCATACAAGAGATCATATTAGGCA 57.506 33.333 0.00 0.00 0.00 4.75
2258 8230 2.241176 TCCCCACCTTGGCTGTAATTAG 59.759 50.000 0.00 0.00 35.79 1.73
2269 8241 0.991920 TTAGGCTCTTCCCCACCTTG 59.008 55.000 0.00 0.00 33.60 3.61
2374 8350 8.527810 ACTTCATTTTTAAACTCAGTGAAACCA 58.472 29.630 0.00 0.00 37.80 3.67
2602 8581 9.559958 CGCAGAACTGATAGAAATAACATTTTT 57.440 29.630 5.97 0.00 0.00 1.94
2784 8851 4.433615 TCTCGAAGTATGACAAGCAATCC 58.566 43.478 0.00 0.00 0.00 3.01
2800 8867 5.060506 TGTTGCTTGGTTTAAGATCTCGAA 58.939 37.500 0.00 0.00 38.76 3.71
2921 8988 5.545658 ATCAAACTTACTATGTGCCAACG 57.454 39.130 0.00 0.00 0.00 4.10
3034 9123 1.480219 GACGCCCTTCGAAGCATACG 61.480 60.000 19.99 19.43 41.67 3.06
3084 9173 5.362556 AGGATCTCAAAAATGACAACACG 57.637 39.130 0.00 0.00 0.00 4.49
3253 9359 2.173519 CTCTTCCCACAATTGCCATGT 58.826 47.619 5.05 0.00 0.00 3.21
3409 9515 7.953158 TCATAGTATCACTTCTTAGCATTGC 57.047 36.000 0.00 0.00 0.00 3.56
3492 9598 1.218047 CGACTCGGGAGCATTGGAA 59.782 57.895 0.00 0.00 0.00 3.53
3688 9800 1.078759 CTCCAACTAGCGTGGAAGCG 61.079 60.000 14.89 2.81 43.00 4.68
3696 9808 3.797256 CGGATTCTTTACTCCAACTAGCG 59.203 47.826 0.00 0.00 0.00 4.26
3712 9824 2.955609 TGGGAAAACCAGCGGATTC 58.044 52.632 1.50 5.74 46.80 2.52
3722 9834 2.178580 TGATCAAGGGCATGGGAAAAC 58.821 47.619 0.00 0.00 0.00 2.43
3729 9841 4.413760 AGGGAAATATGATCAAGGGCATG 58.586 43.478 0.00 0.00 0.00 4.06
3735 9847 4.074970 CCGGGAAGGGAAATATGATCAAG 58.925 47.826 0.00 0.00 35.97 3.02
3753 9865 0.037605 GTAGAACAGACACACCCGGG 60.038 60.000 22.25 22.25 0.00 5.73
3754 9866 0.677288 TGTAGAACAGACACACCCGG 59.323 55.000 0.00 0.00 0.00 5.73
3755 9867 1.779569 GTGTAGAACAGACACACCCG 58.220 55.000 1.16 0.00 45.36 5.28
3758 9870 2.480845 GTGGGTGTAGAACAGACACAC 58.519 52.381 8.08 4.83 46.36 3.82
3760 9872 1.779569 CGTGGGTGTAGAACAGACAC 58.220 55.000 0.00 0.00 45.31 3.67
3761 9873 0.032952 GCGTGGGTGTAGAACAGACA 59.967 55.000 0.00 0.00 0.00 3.41
3762 9874 0.032952 TGCGTGGGTGTAGAACAGAC 59.967 55.000 0.00 0.00 0.00 3.51
3763 9875 0.032952 GTGCGTGGGTGTAGAACAGA 59.967 55.000 0.00 0.00 0.00 3.41
3764 9876 0.249699 TGTGCGTGGGTGTAGAACAG 60.250 55.000 0.00 0.00 0.00 3.16
3765 9877 0.394938 ATGTGCGTGGGTGTAGAACA 59.605 50.000 0.00 0.00 0.00 3.18
3766 9878 1.196808 CAATGTGCGTGGGTGTAGAAC 59.803 52.381 0.00 0.00 0.00 3.01
3767 9879 1.202710 ACAATGTGCGTGGGTGTAGAA 60.203 47.619 0.00 0.00 0.00 2.10
3768 9880 0.394938 ACAATGTGCGTGGGTGTAGA 59.605 50.000 0.00 0.00 0.00 2.59
3769 9881 1.730064 GTACAATGTGCGTGGGTGTAG 59.270 52.381 0.00 0.00 0.00 2.74
3770 9882 1.608542 GGTACAATGTGCGTGGGTGTA 60.609 52.381 0.00 0.00 0.00 2.90
3771 9883 0.887387 GGTACAATGTGCGTGGGTGT 60.887 55.000 0.00 0.00 0.00 4.16
3772 9884 1.582610 GGGTACAATGTGCGTGGGTG 61.583 60.000 0.00 0.00 0.00 4.61
3773 9885 1.302993 GGGTACAATGTGCGTGGGT 60.303 57.895 0.00 0.00 0.00 4.51
3774 9886 2.043980 GGGGTACAATGTGCGTGGG 61.044 63.158 0.00 0.00 0.00 4.61
3775 9887 1.002624 AGGGGTACAATGTGCGTGG 60.003 57.895 0.00 0.00 0.00 4.94
3776 9888 1.305219 CCAGGGGTACAATGTGCGTG 61.305 60.000 0.00 0.00 0.00 5.34
3777 9889 1.002624 CCAGGGGTACAATGTGCGT 60.003 57.895 0.00 0.00 0.00 5.24
3778 9890 1.002624 ACCAGGGGTACAATGTGCG 60.003 57.895 0.00 0.00 32.11 5.34
3779 9891 1.595093 GCACCAGGGGTACAATGTGC 61.595 60.000 0.00 0.00 41.75 4.57
3780 9892 0.251121 TGCACCAGGGGTACAATGTG 60.251 55.000 0.00 0.00 32.11 3.21
3781 9893 0.251165 GTGCACCAGGGGTACAATGT 60.251 55.000 5.22 0.00 30.00 2.71
3782 9894 0.965363 GGTGCACCAGGGGTACAATG 60.965 60.000 31.23 0.00 30.00 2.82
3783 9895 1.382629 GGTGCACCAGGGGTACAAT 59.617 57.895 31.23 0.00 30.00 2.71
3784 9896 2.836187 GGGTGCACCAGGGGTACAA 61.836 63.158 35.78 0.00 39.85 2.41
3785 9897 3.253838 GGGTGCACCAGGGGTACA 61.254 66.667 35.78 0.00 39.85 2.90
3786 9898 3.253838 TGGGTGCACCAGGGGTAC 61.254 66.667 35.78 17.77 46.80 3.34
3794 9906 0.671251 TTTTTGATCGTGGGTGCACC 59.329 50.000 28.57 28.57 40.81 5.01
3795 9907 2.723124 ATTTTTGATCGTGGGTGCAC 57.277 45.000 8.80 8.80 0.00 4.57
3796 9908 3.742433 AAATTTTTGATCGTGGGTGCA 57.258 38.095 0.00 0.00 0.00 4.57
3797 9909 3.612423 GCTAAATTTTTGATCGTGGGTGC 59.388 43.478 0.00 0.00 0.00 5.01
3798 9910 4.804108 TGCTAAATTTTTGATCGTGGGTG 58.196 39.130 0.00 0.00 0.00 4.61
3799 9911 5.461032 TTGCTAAATTTTTGATCGTGGGT 57.539 34.783 0.00 0.00 0.00 4.51
3800 9912 6.201806 TGTTTTGCTAAATTTTTGATCGTGGG 59.798 34.615 0.00 0.00 0.00 4.61
3801 9913 7.171447 TGTTTTGCTAAATTTTTGATCGTGG 57.829 32.000 0.00 0.00 0.00 4.94
3802 9914 8.702438 AGATGTTTTGCTAAATTTTTGATCGTG 58.298 29.630 0.00 0.00 0.00 4.35
3803 9915 8.702438 CAGATGTTTTGCTAAATTTTTGATCGT 58.298 29.630 0.00 0.00 0.00 3.73
3804 9916 8.914654 TCAGATGTTTTGCTAAATTTTTGATCG 58.085 29.630 0.00 0.00 0.00 3.69
3814 9926 9.467258 CAGATTCTTTTCAGATGTTTTGCTAAA 57.533 29.630 0.00 0.00 0.00 1.85
3815 9927 8.849168 TCAGATTCTTTTCAGATGTTTTGCTAA 58.151 29.630 0.00 0.00 0.00 3.09
3816 9928 8.394971 TCAGATTCTTTTCAGATGTTTTGCTA 57.605 30.769 0.00 0.00 0.00 3.49
3817 9929 7.281040 TCAGATTCTTTTCAGATGTTTTGCT 57.719 32.000 0.00 0.00 0.00 3.91
3818 9930 7.935338 TTCAGATTCTTTTCAGATGTTTTGC 57.065 32.000 0.00 0.00 0.00 3.68
3819 9931 9.525409 AGTTTCAGATTCTTTTCAGATGTTTTG 57.475 29.630 0.00 0.00 0.00 2.44
3822 9934 9.525409 CAAAGTTTCAGATTCTTTTCAGATGTT 57.475 29.630 0.00 0.00 30.41 2.71
3823 9935 8.689972 ACAAAGTTTCAGATTCTTTTCAGATGT 58.310 29.630 0.00 0.00 30.41 3.06
3824 9936 8.965172 CACAAAGTTTCAGATTCTTTTCAGATG 58.035 33.333 0.00 0.00 30.41 2.90
3825 9937 8.139989 CCACAAAGTTTCAGATTCTTTTCAGAT 58.860 33.333 0.00 0.00 30.41 2.90
3826 9938 7.339212 TCCACAAAGTTTCAGATTCTTTTCAGA 59.661 33.333 0.00 0.00 30.41 3.27
3827 9939 7.483307 TCCACAAAGTTTCAGATTCTTTTCAG 58.517 34.615 0.00 0.00 30.41 3.02
3828 9940 7.403312 TCCACAAAGTTTCAGATTCTTTTCA 57.597 32.000 0.00 0.00 30.41 2.69
3829 9941 7.922811 ACATCCACAAAGTTTCAGATTCTTTTC 59.077 33.333 0.00 0.00 30.41 2.29
3830 9942 7.707893 CACATCCACAAAGTTTCAGATTCTTTT 59.292 33.333 0.00 0.00 30.41 2.27
3831 9943 7.068593 TCACATCCACAAAGTTTCAGATTCTTT 59.931 33.333 0.00 0.00 32.60 2.52
3832 9944 6.547141 TCACATCCACAAAGTTTCAGATTCTT 59.453 34.615 0.00 0.00 0.00 2.52
3833 9945 6.064060 TCACATCCACAAAGTTTCAGATTCT 58.936 36.000 0.00 0.00 0.00 2.40
3834 9946 6.317789 TCACATCCACAAAGTTTCAGATTC 57.682 37.500 0.00 0.00 0.00 2.52
3835 9947 6.906157 ATCACATCCACAAAGTTTCAGATT 57.094 33.333 0.00 0.00 0.00 2.40
3836 9948 6.906157 AATCACATCCACAAAGTTTCAGAT 57.094 33.333 0.00 0.00 0.00 2.90
3837 9949 7.665145 TCATAATCACATCCACAAAGTTTCAGA 59.335 33.333 0.00 0.00 0.00 3.27
3838 9950 7.819644 TCATAATCACATCCACAAAGTTTCAG 58.180 34.615 0.00 0.00 0.00 3.02
3839 9951 7.575532 GCTCATAATCACATCCACAAAGTTTCA 60.576 37.037 0.00 0.00 0.00 2.69
3840 9952 6.749118 GCTCATAATCACATCCACAAAGTTTC 59.251 38.462 0.00 0.00 0.00 2.78
3841 9953 6.209192 TGCTCATAATCACATCCACAAAGTTT 59.791 34.615 0.00 0.00 0.00 2.66
3842 9954 5.711506 TGCTCATAATCACATCCACAAAGTT 59.288 36.000 0.00 0.00 0.00 2.66
3843 9955 5.255687 TGCTCATAATCACATCCACAAAGT 58.744 37.500 0.00 0.00 0.00 2.66
3844 9956 5.823209 TGCTCATAATCACATCCACAAAG 57.177 39.130 0.00 0.00 0.00 2.77
3845 9957 6.587206 TTTGCTCATAATCACATCCACAAA 57.413 33.333 0.00 0.00 0.00 2.83
3846 9958 6.153170 ACATTTGCTCATAATCACATCCACAA 59.847 34.615 0.00 0.00 0.00 3.33
3847 9959 5.653330 ACATTTGCTCATAATCACATCCACA 59.347 36.000 0.00 0.00 0.00 4.17
3848 9960 6.140303 ACATTTGCTCATAATCACATCCAC 57.860 37.500 0.00 0.00 0.00 4.02
3849 9961 6.778834 AACATTTGCTCATAATCACATCCA 57.221 33.333 0.00 0.00 0.00 3.41
3850 9962 9.241317 CTAAAACATTTGCTCATAATCACATCC 57.759 33.333 0.00 0.00 0.00 3.51
3851 9963 9.241317 CCTAAAACATTTGCTCATAATCACATC 57.759 33.333 0.00 0.00 0.00 3.06
3852 9964 8.752187 ACCTAAAACATTTGCTCATAATCACAT 58.248 29.630 0.00 0.00 0.00 3.21
3853 9965 8.028354 CACCTAAAACATTTGCTCATAATCACA 58.972 33.333 0.00 0.00 0.00 3.58
3854 9966 7.009540 GCACCTAAAACATTTGCTCATAATCAC 59.990 37.037 0.00 0.00 0.00 3.06
3855 9967 7.035004 GCACCTAAAACATTTGCTCATAATCA 58.965 34.615 0.00 0.00 0.00 2.57
3856 9968 7.260603 AGCACCTAAAACATTTGCTCATAATC 58.739 34.615 0.00 0.00 39.32 1.75
3857 9969 7.174107 AGCACCTAAAACATTTGCTCATAAT 57.826 32.000 0.00 0.00 39.32 1.28
3858 9970 6.588719 AGCACCTAAAACATTTGCTCATAA 57.411 33.333 0.00 0.00 39.32 1.90
3859 9971 6.389091 CAAGCACCTAAAACATTTGCTCATA 58.611 36.000 0.00 0.00 42.69 2.15
3860 9972 5.232463 CAAGCACCTAAAACATTTGCTCAT 58.768 37.500 0.00 0.00 42.69 2.90
3861 9973 4.619973 CAAGCACCTAAAACATTTGCTCA 58.380 39.130 0.00 0.00 42.69 4.26
3862 9974 3.429881 GCAAGCACCTAAAACATTTGCTC 59.570 43.478 0.00 0.00 42.69 4.26
3863 9975 3.181467 TGCAAGCACCTAAAACATTTGCT 60.181 39.130 7.66 0.00 45.41 3.91
3864 9976 3.129871 TGCAAGCACCTAAAACATTTGC 58.870 40.909 0.00 0.00 39.72 3.68
3865 9977 5.049167 TCTTGCAAGCACCTAAAACATTTG 58.951 37.500 21.99 0.00 0.00 2.32
3866 9978 5.275067 TCTTGCAAGCACCTAAAACATTT 57.725 34.783 21.99 0.00 0.00 2.32
3867 9979 4.935352 TCTTGCAAGCACCTAAAACATT 57.065 36.364 21.99 0.00 0.00 2.71
3868 9980 4.768968 AGATCTTGCAAGCACCTAAAACAT 59.231 37.500 21.99 5.63 0.00 2.71
3869 9981 4.144297 AGATCTTGCAAGCACCTAAAACA 58.856 39.130 21.99 0.29 0.00 2.83
3870 9982 4.773323 AGATCTTGCAAGCACCTAAAAC 57.227 40.909 21.99 1.50 0.00 2.43
3871 9983 5.415701 CCTTAGATCTTGCAAGCACCTAAAA 59.584 40.000 21.99 1.87 0.00 1.52
3872 9984 4.943705 CCTTAGATCTTGCAAGCACCTAAA 59.056 41.667 21.99 9.51 0.00 1.85
3873 9985 4.225042 TCCTTAGATCTTGCAAGCACCTAA 59.775 41.667 21.99 22.03 0.00 2.69
3874 9986 3.774766 TCCTTAGATCTTGCAAGCACCTA 59.225 43.478 21.99 17.24 0.00 3.08
3875 9987 2.573462 TCCTTAGATCTTGCAAGCACCT 59.427 45.455 21.99 18.16 0.00 4.00
3876 9988 2.991250 TCCTTAGATCTTGCAAGCACC 58.009 47.619 21.99 12.25 0.00 5.01
3877 9989 5.573337 ATTTCCTTAGATCTTGCAAGCAC 57.427 39.130 21.99 16.48 0.00 4.40
3878 9990 6.830324 ACATATTTCCTTAGATCTTGCAAGCA 59.170 34.615 21.99 11.01 0.00 3.91
3879 9991 7.269477 ACATATTTCCTTAGATCTTGCAAGC 57.731 36.000 21.99 8.77 0.00 4.01
3908 10020 7.020914 TGTTTTGAGCACAAACTTTGTTTTT 57.979 28.000 8.93 0.00 44.22 1.94
3909 10021 6.610741 TGTTTTGAGCACAAACTTTGTTTT 57.389 29.167 8.93 0.00 44.22 2.43
3910 10022 6.204495 ACATGTTTTGAGCACAAACTTTGTTT 59.796 30.769 8.93 0.00 44.22 2.83
3911 10023 5.700373 ACATGTTTTGAGCACAAACTTTGTT 59.300 32.000 8.93 0.00 44.22 2.83
3912 10024 5.120519 CACATGTTTTGAGCACAAACTTTGT 59.879 36.000 8.93 9.55 44.22 2.83
3913 10025 5.446206 CCACATGTTTTGAGCACAAACTTTG 60.446 40.000 8.93 8.99 44.22 2.77
3914 10026 4.630940 CCACATGTTTTGAGCACAAACTTT 59.369 37.500 8.93 0.00 44.22 2.66
3915 10027 4.081752 TCCACATGTTTTGAGCACAAACTT 60.082 37.500 8.93 0.00 44.22 2.66
3916 10028 3.446873 TCCACATGTTTTGAGCACAAACT 59.553 39.130 8.93 0.00 44.22 2.66
3917 10029 3.551485 GTCCACATGTTTTGAGCACAAAC 59.449 43.478 8.93 3.85 44.22 2.93
3918 10030 3.733380 CGTCCACATGTTTTGAGCACAAA 60.733 43.478 5.11 5.11 43.10 2.83
3919 10031 2.223456 CGTCCACATGTTTTGAGCACAA 60.223 45.455 0.00 0.00 0.00 3.33
3920 10032 1.333308 CGTCCACATGTTTTGAGCACA 59.667 47.619 0.00 0.00 0.00 4.57
3921 10033 1.334960 CCGTCCACATGTTTTGAGCAC 60.335 52.381 0.00 0.00 0.00 4.40
3922 10034 0.950836 CCGTCCACATGTTTTGAGCA 59.049 50.000 0.00 0.00 0.00 4.26
3923 10035 0.951558 ACCGTCCACATGTTTTGAGC 59.048 50.000 0.00 0.00 0.00 4.26
3924 10036 3.363575 CGTTACCGTCCACATGTTTTGAG 60.364 47.826 0.00 0.00 0.00 3.02
3925 10037 2.544686 CGTTACCGTCCACATGTTTTGA 59.455 45.455 0.00 0.00 0.00 2.69
3926 10038 2.288458 ACGTTACCGTCCACATGTTTTG 59.712 45.455 0.00 0.00 46.28 2.44
3927 10039 2.288458 CACGTTACCGTCCACATGTTTT 59.712 45.455 0.00 0.00 46.28 2.43
3928 10040 1.868498 CACGTTACCGTCCACATGTTT 59.132 47.619 0.00 0.00 46.28 2.83
3929 10041 1.504359 CACGTTACCGTCCACATGTT 58.496 50.000 0.00 0.00 46.28 2.71
3930 10042 0.320073 CCACGTTACCGTCCACATGT 60.320 55.000 0.00 0.00 46.28 3.21
3931 10043 1.017177 CCCACGTTACCGTCCACATG 61.017 60.000 0.00 0.00 46.28 3.21
3932 10044 1.294138 CCCACGTTACCGTCCACAT 59.706 57.895 0.00 0.00 46.28 3.21
3933 10045 2.132996 ACCCACGTTACCGTCCACA 61.133 57.895 0.00 0.00 46.28 4.17
3934 10046 1.665599 CACCCACGTTACCGTCCAC 60.666 63.158 0.00 0.00 46.28 4.02
3935 10047 2.735883 CACCCACGTTACCGTCCA 59.264 61.111 0.00 0.00 46.28 4.02
3936 10048 2.739671 GCACCCACGTTACCGTCC 60.740 66.667 0.00 0.00 46.28 4.79
3937 10049 2.029369 TGCACCCACGTTACCGTC 59.971 61.111 0.00 0.00 46.28 4.79
3939 10051 1.888172 TTGTGCACCCACGTTACCG 60.888 57.895 15.69 0.00 45.04 4.02
3940 10052 1.096386 TGTTGTGCACCCACGTTACC 61.096 55.000 15.69 0.00 45.04 2.85
3941 10053 0.948678 ATGTTGTGCACCCACGTTAC 59.051 50.000 15.69 1.88 45.04 2.50
3942 10054 1.231221 GATGTTGTGCACCCACGTTA 58.769 50.000 15.69 0.00 45.04 3.18
3943 10055 0.749818 TGATGTTGTGCACCCACGTT 60.750 50.000 15.69 2.99 45.04 3.99
3944 10056 0.537143 ATGATGTTGTGCACCCACGT 60.537 50.000 15.69 12.43 45.04 4.49
3945 10057 0.597568 AATGATGTTGTGCACCCACG 59.402 50.000 15.69 0.00 45.04 4.94
3946 10058 2.224018 ACAAATGATGTTGTGCACCCAC 60.224 45.455 15.69 11.79 40.06 4.61
3947 10059 2.037901 ACAAATGATGTTGTGCACCCA 58.962 42.857 15.69 11.65 40.06 4.51
3948 10060 2.818130 ACAAATGATGTTGTGCACCC 57.182 45.000 15.69 5.46 40.06 4.61
3949 10061 5.060816 CGAAATACAAATGATGTTGTGCACC 59.939 40.000 15.69 0.00 43.63 5.01
3950 10062 5.629020 ACGAAATACAAATGATGTTGTGCAC 59.371 36.000 10.75 10.75 43.63 4.57
3951 10063 5.767269 ACGAAATACAAATGATGTTGTGCA 58.233 33.333 0.92 0.00 43.63 4.57
3952 10064 6.689178 AACGAAATACAAATGATGTTGTGC 57.311 33.333 0.92 0.00 43.63 4.57
3953 10065 9.355736 CAAAAACGAAATACAAATGATGTTGTG 57.644 29.630 0.92 0.00 43.63 3.33
3954 10066 9.092876 ACAAAAACGAAATACAAATGATGTTGT 57.907 25.926 0.00 0.00 43.63 3.32
3960 10072 9.400638 GTCCATACAAAAACGAAATACAAATGA 57.599 29.630 0.00 0.00 0.00 2.57
3961 10073 9.186323 TGTCCATACAAAAACGAAATACAAATG 57.814 29.630 0.00 0.00 30.91 2.32
3962 10074 9.921637 ATGTCCATACAAAAACGAAATACAAAT 57.078 25.926 0.00 0.00 39.58 2.32
3963 10075 9.751542 AATGTCCATACAAAAACGAAATACAAA 57.248 25.926 0.00 0.00 39.58 2.83
3964 10076 9.186323 CAATGTCCATACAAAAACGAAATACAA 57.814 29.630 0.00 0.00 39.58 2.41
3965 10077 8.568794 TCAATGTCCATACAAAAACGAAATACA 58.431 29.630 0.00 0.00 39.58 2.29
3966 10078 8.958175 TCAATGTCCATACAAAAACGAAATAC 57.042 30.769 0.00 0.00 39.58 1.89
3967 10079 8.240682 CCTCAATGTCCATACAAAAACGAAATA 58.759 33.333 0.00 0.00 39.58 1.40
3968 10080 7.090173 CCTCAATGTCCATACAAAAACGAAAT 58.910 34.615 0.00 0.00 39.58 2.17
3969 10081 6.442952 CCTCAATGTCCATACAAAAACGAAA 58.557 36.000 0.00 0.00 39.58 3.46
3970 10082 5.048364 CCCTCAATGTCCATACAAAAACGAA 60.048 40.000 0.00 0.00 39.58 3.85
3971 10083 4.457603 CCCTCAATGTCCATACAAAAACGA 59.542 41.667 0.00 0.00 39.58 3.85
3972 10084 4.457603 TCCCTCAATGTCCATACAAAAACG 59.542 41.667 0.00 0.00 39.58 3.60
3973 10085 5.476945 ACTCCCTCAATGTCCATACAAAAAC 59.523 40.000 0.00 0.00 39.58 2.43
3974 10086 5.640147 ACTCCCTCAATGTCCATACAAAAA 58.360 37.500 0.00 0.00 39.58 1.94
3975 10087 5.253330 GACTCCCTCAATGTCCATACAAAA 58.747 41.667 0.00 0.00 39.58 2.44
3976 10088 4.324254 GGACTCCCTCAATGTCCATACAAA 60.324 45.833 6.52 0.00 46.79 2.83
3977 10089 3.199946 GGACTCCCTCAATGTCCATACAA 59.800 47.826 6.52 0.00 46.79 2.41
3978 10090 2.771943 GGACTCCCTCAATGTCCATACA 59.228 50.000 6.52 0.00 46.79 2.29
3979 10091 3.477210 GGACTCCCTCAATGTCCATAC 57.523 52.381 6.52 0.00 46.79 2.39
3984 10096 1.208293 GTCCAGGACTCCCTCAATGTC 59.792 57.143 12.94 0.00 42.02 3.06
3985 10097 1.203364 AGTCCAGGACTCCCTCAATGT 60.203 52.381 17.31 0.00 38.71 2.71
4109 10221 1.898574 CCAAGCTTGCCTTCCACGT 60.899 57.895 21.43 0.00 0.00 4.49
4499 10611 2.229062 CGAAGAAGCCATCGAGCCTATA 59.771 50.000 0.00 0.00 41.43 1.31


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.