Multiple sequence alignment - TraesCS3B01G042400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G042400 chr3B 100.000 3544 0 0 1 3544 21772613 21769070 0.000000e+00 6545
1 TraesCS3B01G042400 chr3B 96.347 219 4 3 1 216 665244517 665244734 1.210000e-94 357
2 TraesCS3B01G042400 chr3B 97.340 188 2 2 1 186 665238514 665238700 2.050000e-82 316
3 TraesCS3B01G042400 chr3B 96.237 186 3 3 33 215 665239261 665239445 5.750000e-78 302
4 TraesCS3B01G042400 chr3D 89.907 2378 161 32 215 2574 14557153 14554837 0.000000e+00 2988
5 TraesCS3B01G042400 chr3D 90.294 680 35 14 2867 3544 14554835 14554185 0.000000e+00 861
6 TraesCS3B01G042400 chr3A 89.612 2291 149 49 331 2574 21786178 21788426 0.000000e+00 2830
7 TraesCS3B01G042400 chr3A 91.056 682 31 14 2867 3541 21788428 21789086 0.000000e+00 894
8 TraesCS3B01G042400 chr6B 100.000 291 0 0 2570 2860 611452068 611451778 4.030000e-149 538
9 TraesCS3B01G042400 chr5B 99.654 289 1 0 2573 2861 13272452 13272740 2.420000e-146 529
10 TraesCS3B01G042400 chr5B 100.000 282 0 0 2574 2855 82236045 82235764 4.050000e-144 521
11 TraesCS3B01G042400 chr5B 96.347 219 4 3 1 216 593542408 593542191 1.210000e-94 357
12 TraesCS3B01G042400 chr5B 96.482 199 4 2 1 196 593548344 593548146 3.410000e-85 326
13 TraesCS3B01G042400 chr5B 97.345 113 3 0 2601 2713 622607010 622607122 3.610000e-45 193
14 TraesCS3B01G042400 chr5B 94.915 118 6 0 2733 2850 622607116 622607233 6.040000e-43 185
15 TraesCS3B01G042400 chr1A 92.424 330 14 5 2867 3195 44861330 44861649 8.960000e-126 460
16 TraesCS3B01G042400 chr1A 92.857 84 6 0 2488 2571 44861242 44861325 4.800000e-24 122
17 TraesCS3B01G042400 chr7A 89.267 382 18 14 2866 3247 532123215 532122857 1.160000e-124 457
18 TraesCS3B01G042400 chr2B 92.135 178 8 3 2684 2861 33405144 33405315 2.730000e-61 246
19 TraesCS3B01G042400 chr2B 92.135 178 8 3 2684 2861 33456045 33456216 2.730000e-61 246
20 TraesCS3B01G042400 chr2D 91.667 72 4 2 894 964 6095182 6095112 8.100000e-17 99


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G042400 chr3B 21769070 21772613 3543 True 6545.0 6545 100.0000 1 3544 1 chr3B.!!$R1 3543
1 TraesCS3B01G042400 chr3B 665238514 665239445 931 False 309.0 316 96.7885 1 215 2 chr3B.!!$F2 214
2 TraesCS3B01G042400 chr3D 14554185 14557153 2968 True 1924.5 2988 90.1005 215 3544 2 chr3D.!!$R1 3329
3 TraesCS3B01G042400 chr3A 21786178 21789086 2908 False 1862.0 2830 90.3340 331 3541 2 chr3A.!!$F1 3210

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
623 1347 0.323542 CTGACGGTGGGACTAGGAGT 60.324 60.0 0.0 0.0 0.0 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2620 3394 0.039888 CGGTTTTGTTTACGGGGCTG 60.04 55.0 0.0 0.0 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 1.220749 GCGGTGGATTCAGTGGCTA 59.779 57.895 0.00 0.00 0.00 3.93
226 944 0.393132 GGAGAGCCCAGCAGTAAACC 60.393 60.000 0.00 0.00 34.14 3.27
227 945 0.741221 GAGAGCCCAGCAGTAAACCG 60.741 60.000 0.00 0.00 0.00 4.44
228 946 2.359975 AGCCCAGCAGTAAACCGC 60.360 61.111 0.00 0.00 0.00 5.68
281 1002 2.657296 CACCCGCGCATAGTACCG 60.657 66.667 8.75 0.00 0.00 4.02
301 1022 2.428491 GCTAGCTAGATCTGGCGACTA 58.572 52.381 25.15 11.14 42.26 2.59
304 1025 1.543802 AGCTAGATCTGGCGACTATGC 59.456 52.381 23.45 5.65 42.26 3.14
315 1036 1.144057 GACTATGCGGTCAGTGGGG 59.856 63.158 0.00 0.00 36.35 4.96
317 1038 3.757248 CTATGCGGTCAGTGGGGCC 62.757 68.421 0.00 0.00 0.00 5.80
350 1071 1.447140 GCCCGCGTGTCATTGAGTA 60.447 57.895 4.92 0.00 0.00 2.59
450 1171 1.002502 AGCCCTCGCTTAAACCCAC 60.003 57.895 0.00 0.00 45.55 4.61
479 1200 2.601763 CGCTCGCGTTTCTTACCTAAAT 59.398 45.455 5.77 0.00 34.35 1.40
491 1212 1.161843 ACCTAAATTTGGCCGTGTCG 58.838 50.000 0.00 0.00 0.00 4.35
568 1292 3.957260 CAGACCCGTTCTGCACTG 58.043 61.111 0.00 0.00 45.51 3.66
570 1294 2.280797 GACCCGTTCTGCACTGCA 60.281 61.111 3.11 3.11 36.92 4.41
571 1295 2.591715 ACCCGTTCTGCACTGCAC 60.592 61.111 0.00 0.00 33.79 4.57
572 1296 3.357079 CCCGTTCTGCACTGCACC 61.357 66.667 0.00 0.00 33.79 5.01
586 1310 3.153825 CACCGGGTTACCTGTGGT 58.846 61.111 6.32 8.42 45.19 4.16
597 1321 1.525995 CCTGTGGTGAGGCACGTTT 60.526 57.895 0.00 0.00 34.83 3.60
615 1339 3.740397 CGTACGCTGACGGTGGGA 61.740 66.667 0.52 0.00 46.04 4.37
618 1342 1.002257 TACGCTGACGGTGGGACTA 60.002 57.895 0.00 0.00 46.04 2.59
619 1343 1.028330 TACGCTGACGGTGGGACTAG 61.028 60.000 0.00 0.00 46.04 2.57
622 1346 1.668101 GCTGACGGTGGGACTAGGAG 61.668 65.000 0.00 0.00 0.00 3.69
623 1347 0.323542 CTGACGGTGGGACTAGGAGT 60.324 60.000 0.00 0.00 0.00 3.85
629 1353 1.475682 GGTGGGACTAGGAGTTACGTG 59.524 57.143 0.00 0.00 0.00 4.49
682 1406 1.028330 TGGCTAGTACGTACAGCGCT 61.028 55.000 27.94 2.64 46.11 5.92
716 1440 3.493129 CGTGTCACTTTCCATTTCTTCGA 59.507 43.478 0.65 0.00 0.00 3.71
719 1443 4.455533 TGTCACTTTCCATTTCTTCGATGG 59.544 41.667 0.00 0.00 44.39 3.51
725 1449 2.232696 TCCATTTCTTCGATGGACGTGA 59.767 45.455 0.00 0.00 46.11 4.35
729 1453 4.725556 TTTCTTCGATGGACGTGAAAAG 57.274 40.909 0.00 0.00 39.77 2.27
742 1466 1.135972 GTGAAAAGCGCGATGACATGT 60.136 47.619 12.10 0.00 0.00 3.21
746 1470 2.511373 GCGCGATGACATGTGGGA 60.511 61.111 12.10 0.00 0.00 4.37
747 1471 1.889105 GCGCGATGACATGTGGGAT 60.889 57.895 12.10 0.00 0.00 3.85
751 1475 1.224069 CGATGACATGTGGGATCGGC 61.224 60.000 17.72 0.00 35.22 5.54
756 1480 2.764128 ATGTGGGATCGGCGAGGT 60.764 61.111 17.22 0.00 0.00 3.85
856 1580 2.027469 GCGGGAGGGGATTAAATATCGT 60.027 50.000 0.00 0.00 0.00 3.73
857 1581 3.858247 CGGGAGGGGATTAAATATCGTC 58.142 50.000 0.00 0.00 0.00 4.20
922 1646 2.165301 CGGGGTTTTAGCGAGCTCG 61.165 63.158 31.37 31.37 43.27 5.03
924 1648 1.217244 GGGTTTTAGCGAGCTCGGA 59.783 57.895 35.10 0.80 40.23 4.55
976 1700 1.218316 CCGTCGGGGAAGAAGAAGG 59.782 63.158 2.34 0.00 38.47 3.46
986 1710 1.554583 AAGAAGAAGGAGACGCCCCC 61.555 60.000 0.00 0.00 37.37 5.40
1041 1765 1.605058 ATCTGGTGGTAGTCGCGCTT 61.605 55.000 5.56 0.00 0.00 4.68
1152 1885 1.712018 CGTCGATGCTCAGGTCCGTA 61.712 60.000 0.00 0.00 0.00 4.02
1186 1924 0.466124 CCTCTCCCCTCCGTCAATTC 59.534 60.000 0.00 0.00 0.00 2.17
1237 1985 0.401395 TCTGGAGGTTCTTGGTGGGT 60.401 55.000 0.00 0.00 0.00 4.51
1242 1990 2.364324 GGAGGTTCTTGGTGGGTTTTTC 59.636 50.000 0.00 0.00 0.00 2.29
1243 1991 3.028130 GAGGTTCTTGGTGGGTTTTTCA 58.972 45.455 0.00 0.00 0.00 2.69
1244 1992 3.641436 GAGGTTCTTGGTGGGTTTTTCAT 59.359 43.478 0.00 0.00 0.00 2.57
1245 1993 3.387699 AGGTTCTTGGTGGGTTTTTCATG 59.612 43.478 0.00 0.00 0.00 3.07
1246 1994 3.494223 GGTTCTTGGTGGGTTTTTCATGG 60.494 47.826 0.00 0.00 0.00 3.66
1247 1995 2.324541 TCTTGGTGGGTTTTTCATGGG 58.675 47.619 0.00 0.00 0.00 4.00
1248 1996 1.347378 CTTGGTGGGTTTTTCATGGGG 59.653 52.381 0.00 0.00 0.00 4.96
1249 1997 0.266152 TGGTGGGTTTTTCATGGGGT 59.734 50.000 0.00 0.00 0.00 4.95
1250 1998 1.344496 TGGTGGGTTTTTCATGGGGTT 60.344 47.619 0.00 0.00 0.00 4.11
1251 1999 1.346395 GGTGGGTTTTTCATGGGGTTC 59.654 52.381 0.00 0.00 0.00 3.62
1252 2000 2.325484 GTGGGTTTTTCATGGGGTTCT 58.675 47.619 0.00 0.00 0.00 3.01
1253 2001 2.037121 GTGGGTTTTTCATGGGGTTCTG 59.963 50.000 0.00 0.00 0.00 3.02
1254 2002 2.091055 TGGGTTTTTCATGGGGTTCTGA 60.091 45.455 0.00 0.00 0.00 3.27
1255 2003 2.299013 GGGTTTTTCATGGGGTTCTGAC 59.701 50.000 0.00 0.00 0.00 3.51
1256 2004 2.030274 GGTTTTTCATGGGGTTCTGACG 60.030 50.000 0.00 0.00 0.00 4.35
1279 2031 3.795688 TGGATTCTTGCTCCTCTTGTT 57.204 42.857 0.00 0.00 33.69 2.83
1280 2032 4.104383 TGGATTCTTGCTCCTCTTGTTT 57.896 40.909 0.00 0.00 33.69 2.83
1281 2033 4.074970 TGGATTCTTGCTCCTCTTGTTTC 58.925 43.478 0.00 0.00 33.69 2.78
1388 2140 1.802715 GCGATTCCGTCCGTCGAAA 60.803 57.895 0.00 0.00 42.86 3.46
1393 2145 3.423907 CGATTCCGTCCGTCGAAATTTTT 60.424 43.478 0.00 0.00 42.86 1.94
1394 2146 2.953640 TCCGTCCGTCGAAATTTTTG 57.046 45.000 0.00 0.00 42.86 2.44
1395 2147 2.481854 TCCGTCCGTCGAAATTTTTGA 58.518 42.857 0.00 0.00 42.86 2.69
1396 2148 2.221517 TCCGTCCGTCGAAATTTTTGAC 59.778 45.455 16.49 16.49 42.86 3.18
1397 2149 2.032722 CCGTCCGTCGAAATTTTTGACA 60.033 45.455 23.09 7.59 42.86 3.58
1400 2152 2.291190 TCCGTCGAAATTTTTGACACCC 59.709 45.455 23.09 3.41 32.91 4.61
1412 2167 1.878953 TGACACCCGAGAGAAAAAGC 58.121 50.000 0.00 0.00 0.00 3.51
1443 2198 6.240205 CCTTTTCCTAGTAGAGTTTTTCCCCT 60.240 42.308 0.00 0.00 0.00 4.79
1476 2233 4.095782 GCTAGTCAGTCAGTGTTAGAGGAG 59.904 50.000 0.00 0.00 0.00 3.69
1485 2242 4.767928 TCAGTGTTAGAGGAGGAAGAAGAC 59.232 45.833 0.00 0.00 0.00 3.01
1561 2319 1.001641 CCAAGAGGCCCAAGACCAG 60.002 63.158 0.00 0.00 0.00 4.00
1723 2481 2.745100 CACCGACGACGAGGAGGA 60.745 66.667 18.00 0.00 42.66 3.71
1724 2482 2.436292 ACCGACGACGAGGAGGAG 60.436 66.667 18.00 0.00 42.66 3.69
1725 2483 3.203412 CCGACGACGAGGAGGAGG 61.203 72.222 9.28 0.00 42.66 4.30
1726 2484 3.878519 CGACGACGAGGAGGAGGC 61.879 72.222 0.00 0.00 42.66 4.70
1727 2485 3.878519 GACGACGAGGAGGAGGCG 61.879 72.222 0.00 0.00 0.00 5.52
1904 2662 3.058160 CTCCGCAAGTGGGGCAAG 61.058 66.667 9.46 0.00 46.55 4.01
1967 2725 2.617274 GCTTGGCACCTTCGACACC 61.617 63.158 0.00 0.00 0.00 4.16
2138 2896 0.961358 CTTCGTCGTCCTCCACCTCT 60.961 60.000 0.00 0.00 0.00 3.69
2147 2905 3.368190 CTCCACCTCTGCTGCTCCG 62.368 68.421 0.00 0.00 0.00 4.63
2177 2935 2.282958 TCGCCGTCCTCTGTCCTT 60.283 61.111 0.00 0.00 0.00 3.36
2186 2944 0.671781 CCTCTGTCCTTGAAGCCACG 60.672 60.000 0.00 0.00 0.00 4.94
2197 2955 3.182590 AAGCCACGAAGCCAGCAGA 62.183 57.895 0.00 0.00 0.00 4.26
2231 2989 2.182030 GAGCCGACTCCAGTTCCG 59.818 66.667 0.00 0.00 36.90 4.30
2258 3031 3.311110 TCCACCACGGCTGAGACC 61.311 66.667 0.00 0.00 33.14 3.85
2418 3191 2.919856 ACCTGCTGCTCGGTGACT 60.920 61.111 12.25 0.00 30.90 3.41
2420 3193 1.739562 CCTGCTGCTCGGTGACTTC 60.740 63.158 0.00 0.00 0.00 3.01
2483 3256 1.144936 CGACTTCCTGGAGATGCCC 59.855 63.158 0.00 0.00 34.97 5.36
2522 3295 1.968493 GGCATGGATGATTTCCTGCAT 59.032 47.619 13.96 0.00 45.68 3.96
2546 3319 2.532973 CGTCGATTTCTGCGTGTGAATC 60.533 50.000 0.00 0.00 0.00 2.52
2574 3348 9.961264 AGAGAGGTTTAAGGTTTATCTTTAAGG 57.039 33.333 0.00 0.00 31.15 2.69
2575 3349 8.577048 AGAGGTTTAAGGTTTATCTTTAAGGC 57.423 34.615 0.00 0.00 31.15 4.35
2576 3350 7.614583 AGAGGTTTAAGGTTTATCTTTAAGGCC 59.385 37.037 0.00 0.00 31.15 5.19
2577 3351 6.376299 AGGTTTAAGGTTTATCTTTAAGGCCG 59.624 38.462 0.00 0.00 33.88 6.13
2578 3352 5.823209 TTAAGGTTTATCTTTAAGGCCGC 57.177 39.130 0.00 0.00 0.00 6.53
2579 3353 2.285977 AGGTTTATCTTTAAGGCCGCG 58.714 47.619 0.00 0.00 0.00 6.46
2580 3354 1.268386 GGTTTATCTTTAAGGCCGCGC 60.268 52.381 0.00 0.00 0.00 6.86
2581 3355 1.669265 GTTTATCTTTAAGGCCGCGCT 59.331 47.619 5.56 0.00 0.00 5.92
2582 3356 2.032680 TTATCTTTAAGGCCGCGCTT 57.967 45.000 5.56 1.72 0.00 4.68
2583 3357 1.295792 TATCTTTAAGGCCGCGCTTG 58.704 50.000 5.56 0.00 0.00 4.01
2584 3358 1.376609 ATCTTTAAGGCCGCGCTTGG 61.377 55.000 5.56 0.18 0.00 3.61
2585 3359 2.032834 TTTAAGGCCGCGCTTGGA 59.967 55.556 5.56 0.00 0.00 3.53
2586 3360 1.582610 CTTTAAGGCCGCGCTTGGAA 61.583 55.000 5.56 0.00 0.00 3.53
2587 3361 0.963355 TTTAAGGCCGCGCTTGGAAT 60.963 50.000 5.56 0.00 0.00 3.01
2588 3362 0.107606 TTAAGGCCGCGCTTGGAATA 60.108 50.000 5.56 0.00 0.00 1.75
2589 3363 0.531974 TAAGGCCGCGCTTGGAATAG 60.532 55.000 5.56 0.00 0.00 1.73
2590 3364 3.953887 GGCCGCGCTTGGAATAGC 61.954 66.667 5.56 0.00 37.80 2.97
2601 3375 1.459450 TGGAATAGCGTTTTCCAGCC 58.541 50.000 12.28 0.00 45.91 4.85
2602 3376 0.377203 GGAATAGCGTTTTCCAGCCG 59.623 55.000 9.60 0.00 41.91 5.52
2603 3377 0.377203 GAATAGCGTTTTCCAGCCGG 59.623 55.000 0.00 0.00 0.00 6.13
2604 3378 0.322187 AATAGCGTTTTCCAGCCGGT 60.322 50.000 1.90 0.00 36.22 5.28
2605 3379 0.322187 ATAGCGTTTTCCAGCCGGTT 60.322 50.000 1.90 0.00 33.92 4.44
2606 3380 0.321021 TAGCGTTTTCCAGCCGGTTA 59.679 50.000 1.90 0.00 33.92 2.85
2607 3381 1.208358 GCGTTTTCCAGCCGGTTAC 59.792 57.895 1.90 0.00 0.00 2.50
2608 3382 1.508808 GCGTTTTCCAGCCGGTTACA 61.509 55.000 1.90 0.00 0.00 2.41
2609 3383 0.236449 CGTTTTCCAGCCGGTTACAC 59.764 55.000 1.90 0.00 0.00 2.90
2610 3384 1.601166 GTTTTCCAGCCGGTTACACT 58.399 50.000 1.90 0.00 0.00 3.55
2611 3385 1.951602 GTTTTCCAGCCGGTTACACTT 59.048 47.619 1.90 0.00 0.00 3.16
2612 3386 1.600023 TTTCCAGCCGGTTACACTTG 58.400 50.000 1.90 0.00 0.00 3.16
2613 3387 0.470766 TTCCAGCCGGTTACACTTGT 59.529 50.000 1.90 0.00 0.00 3.16
2614 3388 1.340088 TCCAGCCGGTTACACTTGTA 58.660 50.000 1.90 0.00 0.00 2.41
2615 3389 1.693062 TCCAGCCGGTTACACTTGTAA 59.307 47.619 1.90 0.00 38.10 2.41
2616 3390 2.104451 TCCAGCCGGTTACACTTGTAAA 59.896 45.455 1.90 0.00 41.58 2.01
2617 3391 2.879646 CCAGCCGGTTACACTTGTAAAA 59.120 45.455 1.90 0.00 41.58 1.52
2618 3392 3.504520 CCAGCCGGTTACACTTGTAAAAT 59.495 43.478 1.90 0.00 41.58 1.82
2619 3393 4.696402 CCAGCCGGTTACACTTGTAAAATA 59.304 41.667 1.90 0.00 41.58 1.40
2620 3394 5.391203 CCAGCCGGTTACACTTGTAAAATAC 60.391 44.000 1.90 0.00 41.58 1.89
2621 3395 5.179742 CAGCCGGTTACACTTGTAAAATACA 59.820 40.000 1.90 0.00 41.58 2.29
2622 3396 5.410439 AGCCGGTTACACTTGTAAAATACAG 59.590 40.000 1.90 0.00 41.58 2.74
2623 3397 5.624292 CCGGTTACACTTGTAAAATACAGC 58.376 41.667 3.38 0.00 41.58 4.40
2624 3398 5.391203 CCGGTTACACTTGTAAAATACAGCC 60.391 44.000 3.38 0.00 41.58 4.85
2625 3399 5.391203 CGGTTACACTTGTAAAATACAGCCC 60.391 44.000 3.38 0.00 41.58 5.19
2626 3400 5.106038 GGTTACACTTGTAAAATACAGCCCC 60.106 44.000 3.38 0.00 41.58 5.80
2627 3401 3.078837 ACACTTGTAAAATACAGCCCCG 58.921 45.455 0.00 0.00 40.24 5.73
2628 3402 3.078837 CACTTGTAAAATACAGCCCCGT 58.921 45.455 0.00 0.00 40.24 5.28
2629 3403 4.255301 CACTTGTAAAATACAGCCCCGTA 58.745 43.478 0.00 0.00 40.24 4.02
2630 3404 4.696402 CACTTGTAAAATACAGCCCCGTAA 59.304 41.667 0.00 0.00 40.24 3.18
2631 3405 5.181622 CACTTGTAAAATACAGCCCCGTAAA 59.818 40.000 0.00 0.00 40.24 2.01
2632 3406 5.181811 ACTTGTAAAATACAGCCCCGTAAAC 59.818 40.000 0.00 0.00 40.24 2.01
2633 3407 4.649692 TGTAAAATACAGCCCCGTAAACA 58.350 39.130 0.00 0.00 34.06 2.83
2634 3408 5.068636 TGTAAAATACAGCCCCGTAAACAA 58.931 37.500 0.00 0.00 34.06 2.83
2635 3409 5.533903 TGTAAAATACAGCCCCGTAAACAAA 59.466 36.000 0.00 0.00 34.06 2.83
2636 3410 5.532664 AAAATACAGCCCCGTAAACAAAA 57.467 34.783 0.00 0.00 0.00 2.44
2637 3411 4.508461 AATACAGCCCCGTAAACAAAAC 57.492 40.909 0.00 0.00 0.00 2.43
2638 3412 1.034356 ACAGCCCCGTAAACAAAACC 58.966 50.000 0.00 0.00 0.00 3.27
2639 3413 0.039888 CAGCCCCGTAAACAAAACCG 60.040 55.000 0.00 0.00 0.00 4.44
2640 3414 1.174078 AGCCCCGTAAACAAAACCGG 61.174 55.000 0.00 0.00 40.12 5.28
2641 3415 1.454572 GCCCCGTAAACAAAACCGGT 61.455 55.000 0.00 0.00 38.79 5.28
2642 3416 0.311477 CCCCGTAAACAAAACCGGTG 59.689 55.000 8.52 0.00 38.79 4.94
2643 3417 0.311477 CCCGTAAACAAAACCGGTGG 59.689 55.000 8.52 3.27 38.79 4.61
2644 3418 1.307097 CCGTAAACAAAACCGGTGGA 58.693 50.000 8.52 0.00 35.78 4.02
2645 3419 1.002576 CCGTAAACAAAACCGGTGGAC 60.003 52.381 8.52 0.00 35.78 4.02
2646 3420 1.669779 CGTAAACAAAACCGGTGGACA 59.330 47.619 8.52 0.00 0.00 4.02
2647 3421 2.097142 CGTAAACAAAACCGGTGGACAA 59.903 45.455 8.52 0.00 0.00 3.18
2648 3422 2.951457 AAACAAAACCGGTGGACAAG 57.049 45.000 8.52 0.00 0.00 3.16
2649 3423 2.131776 AACAAAACCGGTGGACAAGA 57.868 45.000 8.52 0.00 0.00 3.02
2650 3424 1.385528 ACAAAACCGGTGGACAAGAC 58.614 50.000 8.52 0.00 0.00 3.01
2651 3425 0.306533 CAAAACCGGTGGACAAGACG 59.693 55.000 8.52 0.00 0.00 4.18
2652 3426 0.178533 AAAACCGGTGGACAAGACGA 59.821 50.000 8.52 0.00 0.00 4.20
2653 3427 0.531311 AAACCGGTGGACAAGACGAC 60.531 55.000 8.52 0.00 0.00 4.34
2654 3428 2.048503 CCGGTGGACAAGACGACC 60.049 66.667 0.00 0.00 35.75 4.79
2655 3429 2.571216 CCGGTGGACAAGACGACCT 61.571 63.158 0.00 0.00 36.69 3.85
2656 3430 1.372997 CGGTGGACAAGACGACCTG 60.373 63.158 0.00 0.00 36.69 4.00
2657 3431 1.004918 GGTGGACAAGACGACCTGG 60.005 63.158 0.00 0.00 36.10 4.45
2658 3432 1.668151 GTGGACAAGACGACCTGGC 60.668 63.158 0.00 0.00 0.00 4.85
2659 3433 2.432628 GGACAAGACGACCTGGCG 60.433 66.667 8.60 8.60 37.29 5.69
2660 3434 3.112709 GACAAGACGACCTGGCGC 61.113 66.667 0.00 0.00 33.86 6.53
2661 3435 3.575351 GACAAGACGACCTGGCGCT 62.575 63.158 7.64 6.19 33.86 5.92
2662 3436 2.357517 CAAGACGACCTGGCGCTT 60.358 61.111 7.64 10.64 33.86 4.68
2663 3437 2.357517 AAGACGACCTGGCGCTTG 60.358 61.111 7.64 0.00 33.86 4.01
2664 3438 3.883744 AAGACGACCTGGCGCTTGG 62.884 63.158 7.64 12.64 33.86 3.61
2665 3439 4.373116 GACGACCTGGCGCTTGGA 62.373 66.667 22.11 0.00 33.86 3.53
2666 3440 3.876589 GACGACCTGGCGCTTGGAA 62.877 63.158 22.11 0.00 33.86 3.53
2667 3441 3.423154 CGACCTGGCGCTTGGAAC 61.423 66.667 22.11 14.82 0.00 3.62
2668 3442 3.423154 GACCTGGCGCTTGGAACG 61.423 66.667 22.11 0.77 0.00 3.95
2669 3443 4.250305 ACCTGGCGCTTGGAACGT 62.250 61.111 22.11 1.35 0.00 3.99
2670 3444 3.423154 CCTGGCGCTTGGAACGTC 61.423 66.667 7.64 0.00 35.23 4.34
2671 3445 3.777925 CTGGCGCTTGGAACGTCG 61.778 66.667 7.64 0.00 38.15 5.12
2672 3446 4.595538 TGGCGCTTGGAACGTCGT 62.596 61.111 7.64 0.00 38.15 4.34
2673 3447 2.431260 GGCGCTTGGAACGTCGTA 60.431 61.111 7.64 0.00 0.00 3.43
2674 3448 1.808390 GGCGCTTGGAACGTCGTAT 60.808 57.895 7.64 0.00 0.00 3.06
2675 3449 1.629504 GCGCTTGGAACGTCGTATC 59.370 57.895 0.00 0.00 0.00 2.24
2676 3450 1.074319 GCGCTTGGAACGTCGTATCA 61.074 55.000 0.00 0.00 0.00 2.15
2677 3451 0.638746 CGCTTGGAACGTCGTATCAC 59.361 55.000 0.00 0.00 0.00 3.06
2678 3452 0.638746 GCTTGGAACGTCGTATCACG 59.361 55.000 0.00 0.00 45.65 4.35
2694 3468 6.524239 TCGTATCACGATGGTAATTATTACGC 59.476 38.462 8.75 3.55 46.73 4.42
2695 3469 6.237384 CGTATCACGATGGTAATTATTACGCC 60.237 42.308 8.75 0.00 46.05 5.68
2696 3470 5.204409 TCACGATGGTAATTATTACGCCT 57.796 39.130 8.75 0.00 37.00 5.52
2697 3471 4.986034 TCACGATGGTAATTATTACGCCTG 59.014 41.667 8.75 2.75 37.00 4.85
2698 3472 4.748102 CACGATGGTAATTATTACGCCTGT 59.252 41.667 8.75 3.28 37.00 4.00
2699 3473 5.235616 CACGATGGTAATTATTACGCCTGTT 59.764 40.000 8.75 0.00 37.00 3.16
2700 3474 5.818857 ACGATGGTAATTATTACGCCTGTTT 59.181 36.000 8.75 0.00 37.00 2.83
2701 3475 6.018507 ACGATGGTAATTATTACGCCTGTTTC 60.019 38.462 8.75 0.00 37.00 2.78
2702 3476 6.565247 CGATGGTAATTATTACGCCTGTTTCC 60.565 42.308 8.75 0.00 37.00 3.13
2703 3477 5.747342 TGGTAATTATTACGCCTGTTTCCT 58.253 37.500 8.75 0.00 37.00 3.36
2704 3478 5.818857 TGGTAATTATTACGCCTGTTTCCTC 59.181 40.000 8.75 0.00 37.00 3.71
2705 3479 5.818857 GGTAATTATTACGCCTGTTTCCTCA 59.181 40.000 8.75 0.00 37.00 3.86
2706 3480 6.316890 GGTAATTATTACGCCTGTTTCCTCAA 59.683 38.462 8.75 0.00 37.00 3.02
2707 3481 6.827586 AATTATTACGCCTGTTTCCTCAAA 57.172 33.333 0.00 0.00 0.00 2.69
2708 3482 7.404671 AATTATTACGCCTGTTTCCTCAAAT 57.595 32.000 0.00 0.00 0.00 2.32
2709 3483 8.514330 AATTATTACGCCTGTTTCCTCAAATA 57.486 30.769 0.00 0.00 0.00 1.40
2710 3484 5.813080 ATTACGCCTGTTTCCTCAAATAC 57.187 39.130 0.00 0.00 0.00 1.89
2711 3485 3.134574 ACGCCTGTTTCCTCAAATACA 57.865 42.857 0.00 0.00 0.00 2.29
2712 3486 2.812011 ACGCCTGTTTCCTCAAATACAC 59.188 45.455 0.00 0.00 0.00 2.90
2713 3487 2.161609 CGCCTGTTTCCTCAAATACACC 59.838 50.000 0.00 0.00 0.00 4.16
2714 3488 2.161609 GCCTGTTTCCTCAAATACACCG 59.838 50.000 0.00 0.00 0.00 4.94
2715 3489 2.747446 CCTGTTTCCTCAAATACACCGG 59.253 50.000 0.00 0.00 0.00 5.28
2716 3490 3.408634 CTGTTTCCTCAAATACACCGGT 58.591 45.455 0.00 0.00 0.00 5.28
2717 3491 4.563993 CCTGTTTCCTCAAATACACCGGTA 60.564 45.833 6.87 0.00 0.00 4.02
2718 3492 4.970711 TGTTTCCTCAAATACACCGGTAA 58.029 39.130 6.87 0.00 32.19 2.85
2719 3493 5.562635 TGTTTCCTCAAATACACCGGTAAT 58.437 37.500 6.87 0.14 32.19 1.89
2720 3494 5.413213 TGTTTCCTCAAATACACCGGTAATG 59.587 40.000 6.87 0.00 32.19 1.90
2721 3495 4.145365 TCCTCAAATACACCGGTAATGG 57.855 45.455 6.87 0.00 32.19 3.16
2722 3496 3.118186 TCCTCAAATACACCGGTAATGGG 60.118 47.826 6.87 1.68 32.19 4.00
2723 3497 2.616842 CTCAAATACACCGGTAATGGGC 59.383 50.000 6.87 0.00 32.19 5.36
2724 3498 2.240160 TCAAATACACCGGTAATGGGCT 59.760 45.455 6.87 0.00 32.19 5.19
2725 3499 2.341846 AATACACCGGTAATGGGCTG 57.658 50.000 6.87 0.00 32.19 4.85
2726 3500 0.472471 ATACACCGGTAATGGGCTGG 59.528 55.000 6.87 0.00 38.32 4.85
2727 3501 0.910566 TACACCGGTAATGGGCTGGT 60.911 55.000 6.87 0.00 45.80 4.00
2728 3502 0.910566 ACACCGGTAATGGGCTGGTA 60.911 55.000 6.87 0.00 43.26 3.25
2729 3503 0.472471 CACCGGTAATGGGCTGGTAT 59.528 55.000 6.87 0.00 43.26 2.73
2730 3504 1.695242 CACCGGTAATGGGCTGGTATA 59.305 52.381 6.87 0.00 43.26 1.47
2731 3505 2.304761 CACCGGTAATGGGCTGGTATAT 59.695 50.000 6.87 0.00 43.26 0.86
2732 3506 2.304761 ACCGGTAATGGGCTGGTATATG 59.695 50.000 4.49 0.00 43.29 1.78
2733 3507 2.569853 CCGGTAATGGGCTGGTATATGA 59.430 50.000 0.00 0.00 0.00 2.15
2734 3508 3.199946 CCGGTAATGGGCTGGTATATGAT 59.800 47.826 0.00 0.00 0.00 2.45
2735 3509 4.407621 CCGGTAATGGGCTGGTATATGATA 59.592 45.833 0.00 0.00 0.00 2.15
2736 3510 5.357257 CGGTAATGGGCTGGTATATGATAC 58.643 45.833 0.00 0.00 0.00 2.24
2737 3511 5.105106 CGGTAATGGGCTGGTATATGATACA 60.105 44.000 0.00 0.00 0.00 2.29
2738 3512 6.408092 CGGTAATGGGCTGGTATATGATACAT 60.408 42.308 0.00 0.00 0.00 2.29
2739 3513 6.767902 GGTAATGGGCTGGTATATGATACATG 59.232 42.308 0.00 0.00 0.00 3.21
2740 3514 4.220693 TGGGCTGGTATATGATACATGC 57.779 45.455 0.00 2.79 0.00 4.06
2741 3515 3.054434 TGGGCTGGTATATGATACATGCC 60.054 47.826 16.90 16.90 36.95 4.40
2742 3516 3.200825 GGGCTGGTATATGATACATGCCT 59.799 47.826 20.96 0.00 37.44 4.75
2743 3517 4.446371 GGCTGGTATATGATACATGCCTC 58.554 47.826 17.46 0.00 35.77 4.70
2744 3518 4.080919 GGCTGGTATATGATACATGCCTCA 60.081 45.833 17.46 0.00 35.77 3.86
2745 3519 5.114780 GCTGGTATATGATACATGCCTCAG 58.885 45.833 0.00 0.00 0.00 3.35
2746 3520 5.089970 TGGTATATGATACATGCCTCAGC 57.910 43.478 0.00 0.00 40.48 4.26
2747 3521 4.115516 GGTATATGATACATGCCTCAGCG 58.884 47.826 0.00 0.00 44.31 5.18
2748 3522 2.084610 TATGATACATGCCTCAGCGC 57.915 50.000 0.00 0.00 44.31 5.92
2749 3523 0.107268 ATGATACATGCCTCAGCGCA 59.893 50.000 11.47 0.00 44.31 6.09
2751 3525 0.795085 GATACATGCCTCAGCGCATC 59.205 55.000 11.47 0.00 46.55 3.91
2752 3526 0.947660 ATACATGCCTCAGCGCATCG 60.948 55.000 11.47 0.00 46.55 3.84
2753 3527 2.976692 TACATGCCTCAGCGCATCGG 62.977 60.000 11.47 7.40 46.55 4.18
2754 3528 3.853487 ATGCCTCAGCGCATCGGA 61.853 61.111 11.47 0.00 46.55 4.55
2755 3529 3.174507 ATGCCTCAGCGCATCGGAT 62.175 57.895 11.47 0.00 46.55 4.18
2756 3530 2.590007 GCCTCAGCGCATCGGATT 60.590 61.111 11.47 0.00 0.00 3.01
2757 3531 2.182842 GCCTCAGCGCATCGGATTT 61.183 57.895 11.47 0.00 0.00 2.17
2758 3532 0.880278 GCCTCAGCGCATCGGATTTA 60.880 55.000 11.47 0.00 0.00 1.40
2759 3533 0.861837 CCTCAGCGCATCGGATTTAC 59.138 55.000 11.47 0.00 0.00 2.01
2760 3534 1.570813 CTCAGCGCATCGGATTTACA 58.429 50.000 11.47 0.00 0.00 2.41
2761 3535 1.933181 CTCAGCGCATCGGATTTACAA 59.067 47.619 11.47 0.00 0.00 2.41
2762 3536 2.351418 CTCAGCGCATCGGATTTACAAA 59.649 45.455 11.47 0.00 0.00 2.83
2763 3537 2.942376 TCAGCGCATCGGATTTACAAAT 59.058 40.909 11.47 0.00 0.00 2.32
2764 3538 4.123506 TCAGCGCATCGGATTTACAAATA 58.876 39.130 11.47 0.00 0.00 1.40
2765 3539 4.025229 TCAGCGCATCGGATTTACAAATAC 60.025 41.667 11.47 0.00 0.00 1.89
2766 3540 3.874543 AGCGCATCGGATTTACAAATACA 59.125 39.130 11.47 0.00 0.00 2.29
2767 3541 4.334203 AGCGCATCGGATTTACAAATACAA 59.666 37.500 11.47 0.00 0.00 2.41
2768 3542 4.436523 GCGCATCGGATTTACAAATACAAC 59.563 41.667 0.30 0.00 0.00 3.32
2769 3543 4.967575 CGCATCGGATTTACAAATACAACC 59.032 41.667 0.00 0.00 0.00 3.77
2770 3544 5.278604 GCATCGGATTTACAAATACAACCC 58.721 41.667 0.00 0.00 0.00 4.11
2771 3545 5.507077 CATCGGATTTACAAATACAACCCG 58.493 41.667 0.00 0.00 34.17 5.28
2772 3546 4.577875 TCGGATTTACAAATACAACCCGT 58.422 39.130 0.00 0.00 34.38 5.28
2773 3547 4.392445 TCGGATTTACAAATACAACCCGTG 59.608 41.667 0.00 0.00 34.38 4.94
2774 3548 4.154556 CGGATTTACAAATACAACCCGTGT 59.845 41.667 0.00 0.00 44.82 4.49
2775 3549 5.633927 GGATTTACAAATACAACCCGTGTC 58.366 41.667 0.00 0.00 41.98 3.67
2776 3550 5.181622 GGATTTACAAATACAACCCGTGTCA 59.818 40.000 0.00 0.00 41.98 3.58
2777 3551 6.127842 GGATTTACAAATACAACCCGTGTCAT 60.128 38.462 0.00 0.00 41.98 3.06
2778 3552 5.614923 TTACAAATACAACCCGTGTCATG 57.385 39.130 0.00 0.00 41.98 3.07
2779 3553 3.482436 ACAAATACAACCCGTGTCATGT 58.518 40.909 0.00 0.00 41.98 3.21
2780 3554 4.643463 ACAAATACAACCCGTGTCATGTA 58.357 39.130 0.00 0.00 41.98 2.29
2781 3555 5.250200 ACAAATACAACCCGTGTCATGTAT 58.750 37.500 0.00 0.00 41.98 2.29
2782 3556 5.708230 ACAAATACAACCCGTGTCATGTATT 59.292 36.000 3.23 3.23 45.81 1.89
2783 3557 6.827586 AAATACAACCCGTGTCATGTATTT 57.172 33.333 12.31 12.31 46.30 1.40
2784 3558 6.431198 AATACAACCCGTGTCATGTATTTC 57.569 37.500 3.23 0.00 43.02 2.17
2785 3559 4.015872 ACAACCCGTGTCATGTATTTCT 57.984 40.909 0.00 0.00 34.38 2.52
2786 3560 4.394729 ACAACCCGTGTCATGTATTTCTT 58.605 39.130 0.00 0.00 34.38 2.52
2787 3561 4.825085 ACAACCCGTGTCATGTATTTCTTT 59.175 37.500 0.00 0.00 34.38 2.52
2788 3562 5.153513 CAACCCGTGTCATGTATTTCTTTG 58.846 41.667 0.00 0.00 0.00 2.77
2789 3563 3.756434 ACCCGTGTCATGTATTTCTTTGG 59.244 43.478 0.00 0.00 0.00 3.28
2790 3564 3.128589 CCCGTGTCATGTATTTCTTTGGG 59.871 47.826 0.00 0.00 0.00 4.12
2791 3565 4.006989 CCGTGTCATGTATTTCTTTGGGA 58.993 43.478 0.00 0.00 0.00 4.37
2792 3566 4.457603 CCGTGTCATGTATTTCTTTGGGAA 59.542 41.667 0.00 0.00 0.00 3.97
2793 3567 5.390613 CGTGTCATGTATTTCTTTGGGAAC 58.609 41.667 0.00 0.00 33.13 3.62
2812 3586 6.604735 GGAACCAGTAATATGCAAGTGTAG 57.395 41.667 0.00 0.00 0.00 2.74
2813 3587 6.346096 GGAACCAGTAATATGCAAGTGTAGA 58.654 40.000 0.00 0.00 0.00 2.59
2814 3588 6.821665 GGAACCAGTAATATGCAAGTGTAGAA 59.178 38.462 0.00 0.00 0.00 2.10
2815 3589 7.011482 GGAACCAGTAATATGCAAGTGTAGAAG 59.989 40.741 0.00 0.00 0.00 2.85
2816 3590 6.947464 ACCAGTAATATGCAAGTGTAGAAGT 58.053 36.000 0.00 0.00 0.00 3.01
2817 3591 7.394816 ACCAGTAATATGCAAGTGTAGAAGTT 58.605 34.615 0.00 0.00 0.00 2.66
2818 3592 7.883311 ACCAGTAATATGCAAGTGTAGAAGTTT 59.117 33.333 0.00 0.00 0.00 2.66
2819 3593 9.378551 CCAGTAATATGCAAGTGTAGAAGTTTA 57.621 33.333 0.00 0.00 0.00 2.01
2821 3595 9.084164 AGTAATATGCAAGTGTAGAAGTTTACG 57.916 33.333 0.00 0.00 0.00 3.18
2822 3596 6.903883 ATATGCAAGTGTAGAAGTTTACGG 57.096 37.500 0.00 0.00 0.00 4.02
2823 3597 3.395639 TGCAAGTGTAGAAGTTTACGGG 58.604 45.455 0.00 0.00 0.00 5.28
2824 3598 3.181463 TGCAAGTGTAGAAGTTTACGGGT 60.181 43.478 0.00 0.00 0.00 5.28
2825 3599 3.185797 GCAAGTGTAGAAGTTTACGGGTG 59.814 47.826 0.00 0.00 0.00 4.61
2826 3600 4.374399 CAAGTGTAGAAGTTTACGGGTGT 58.626 43.478 0.00 0.00 0.00 4.16
2827 3601 3.986277 AGTGTAGAAGTTTACGGGTGTG 58.014 45.455 0.00 0.00 0.00 3.82
2828 3602 3.062042 GTGTAGAAGTTTACGGGTGTGG 58.938 50.000 0.00 0.00 0.00 4.17
2829 3603 2.037511 TGTAGAAGTTTACGGGTGTGGG 59.962 50.000 0.00 0.00 0.00 4.61
2830 3604 1.426751 AGAAGTTTACGGGTGTGGGA 58.573 50.000 0.00 0.00 0.00 4.37
2831 3605 1.770061 AGAAGTTTACGGGTGTGGGAA 59.230 47.619 0.00 0.00 0.00 3.97
2832 3606 2.173143 AGAAGTTTACGGGTGTGGGAAA 59.827 45.455 0.00 0.00 0.00 3.13
2833 3607 2.963599 AGTTTACGGGTGTGGGAAAT 57.036 45.000 0.00 0.00 0.00 2.17
2834 3608 4.041938 AGAAGTTTACGGGTGTGGGAAATA 59.958 41.667 0.00 0.00 0.00 1.40
2835 3609 4.579647 AGTTTACGGGTGTGGGAAATAT 57.420 40.909 0.00 0.00 0.00 1.28
2836 3610 4.520179 AGTTTACGGGTGTGGGAAATATC 58.480 43.478 0.00 0.00 0.00 1.63
2837 3611 3.564053 TTACGGGTGTGGGAAATATCC 57.436 47.619 0.00 0.00 45.77 2.59
2849 3623 4.440839 GGAAATATCCGGCAATCCAATC 57.559 45.455 0.00 0.00 35.59 2.67
2850 3624 3.119849 GGAAATATCCGGCAATCCAATCG 60.120 47.826 0.00 0.00 35.59 3.34
2851 3625 2.113860 ATATCCGGCAATCCAATCGG 57.886 50.000 0.00 0.00 43.42 4.18
2852 3626 0.036164 TATCCGGCAATCCAATCGGG 59.964 55.000 0.00 0.00 42.44 5.14
2863 3637 3.393426 TCCAATCGGGACCTAAGTAGT 57.607 47.619 0.00 0.00 42.15 2.73
2864 3638 4.524802 TCCAATCGGGACCTAAGTAGTA 57.475 45.455 0.00 0.00 42.15 1.82
2865 3639 4.870636 TCCAATCGGGACCTAAGTAGTAA 58.129 43.478 0.00 0.00 42.15 2.24
2901 3675 1.555075 GGCCTCCTGTGAGTGTAATCA 59.445 52.381 0.00 0.00 36.86 2.57
2902 3676 2.027192 GGCCTCCTGTGAGTGTAATCAA 60.027 50.000 0.00 0.00 36.86 2.57
2904 3678 3.873952 GCCTCCTGTGAGTGTAATCAATC 59.126 47.826 0.00 0.00 38.86 2.67
2905 3679 4.446371 CCTCCTGTGAGTGTAATCAATCC 58.554 47.826 0.00 0.00 37.80 3.01
2907 3681 3.513912 TCCTGTGAGTGTAATCAATCCGT 59.486 43.478 0.00 0.00 37.80 4.69
2908 3682 3.618594 CCTGTGAGTGTAATCAATCCGTG 59.381 47.826 0.00 0.00 37.80 4.94
2909 3683 4.245660 CTGTGAGTGTAATCAATCCGTGT 58.754 43.478 0.00 0.00 37.80 4.49
2910 3684 3.993736 TGTGAGTGTAATCAATCCGTGTG 59.006 43.478 0.00 0.00 37.80 3.82
2911 3685 3.000041 TGAGTGTAATCAATCCGTGTGC 59.000 45.455 0.00 0.00 37.80 4.57
2912 3686 1.999735 AGTGTAATCAATCCGTGTGCG 59.000 47.619 0.00 0.00 37.95 5.34
2930 3704 0.687757 CGTTGGGAGGGAGGAGATCA 60.688 60.000 0.00 0.00 0.00 2.92
2974 3748 3.850098 AACCAGCTCGTGCCCAAGG 62.850 63.158 5.73 6.12 40.80 3.61
2982 3756 2.597510 GTGCCCAAGGTGGTGTCC 60.598 66.667 0.00 0.00 35.17 4.02
3031 3809 2.881074 CGTTATGGTGGTGAGAGTGAG 58.119 52.381 0.00 0.00 0.00 3.51
3032 3810 2.231478 CGTTATGGTGGTGAGAGTGAGT 59.769 50.000 0.00 0.00 0.00 3.41
3033 3811 3.589988 GTTATGGTGGTGAGAGTGAGTG 58.410 50.000 0.00 0.00 0.00 3.51
3034 3812 2.015456 ATGGTGGTGAGAGTGAGTGA 57.985 50.000 0.00 0.00 0.00 3.41
3035 3813 1.332195 TGGTGGTGAGAGTGAGTGAG 58.668 55.000 0.00 0.00 0.00 3.51
3036 3814 1.333177 GGTGGTGAGAGTGAGTGAGT 58.667 55.000 0.00 0.00 0.00 3.41
3109 3887 5.297029 GCTGGTTATGTTATGTTCCTCCTTC 59.703 44.000 0.00 0.00 0.00 3.46
3110 3888 5.751586 TGGTTATGTTATGTTCCTCCTTCC 58.248 41.667 0.00 0.00 0.00 3.46
3117 3895 6.969043 TGTTATGTTCCTCCTTCCATGTTAT 58.031 36.000 0.00 0.00 0.00 1.89
3188 3966 3.637229 GGCTGTTGCTCCTAGTAGTATGA 59.363 47.826 0.00 0.00 39.59 2.15
3189 3967 4.099573 GGCTGTTGCTCCTAGTAGTATGAA 59.900 45.833 0.00 0.00 39.59 2.57
3190 3968 5.221541 GGCTGTTGCTCCTAGTAGTATGAAT 60.222 44.000 0.00 0.00 39.59 2.57
3191 3969 5.694006 GCTGTTGCTCCTAGTAGTATGAATG 59.306 44.000 0.00 0.00 36.03 2.67
3247 4025 0.873743 TTTTTGCCGCTTTCTTGCCG 60.874 50.000 0.00 0.00 0.00 5.69
3293 4071 8.046708 TGTCTTACCTGCTCATTTGTATGTATT 58.953 33.333 0.00 0.00 33.34 1.89
3294 4072 8.338259 GTCTTACCTGCTCATTTGTATGTATTG 58.662 37.037 0.00 0.00 33.34 1.90
3295 4073 8.046708 TCTTACCTGCTCATTTGTATGTATTGT 58.953 33.333 0.00 0.00 33.34 2.71
3296 4074 6.441093 ACCTGCTCATTTGTATGTATTGTG 57.559 37.500 0.00 0.00 33.34 3.33
3308 4086 6.342906 TGTATGTATTGTGGTACTAGTTGCC 58.657 40.000 0.00 4.90 0.00 4.52
3311 4089 2.736144 TTGTGGTACTAGTTGCCGAG 57.264 50.000 0.00 0.00 0.00 4.63
3312 4090 0.245539 TGTGGTACTAGTTGCCGAGC 59.754 55.000 0.00 0.00 0.00 5.03
3313 4091 0.245539 GTGGTACTAGTTGCCGAGCA 59.754 55.000 0.00 0.00 36.47 4.26
3514 4299 5.354767 TCTGTATGCATCTTACTTGCTGAG 58.645 41.667 0.19 0.00 40.77 3.35
3527 4312 1.078848 GCTGAGCCGTCTTGGATGT 60.079 57.895 0.00 0.00 42.00 3.06
3528 4313 1.364626 GCTGAGCCGTCTTGGATGTG 61.365 60.000 0.00 0.00 42.00 3.21
3530 4315 1.078848 GAGCCGTCTTGGATGTGCT 60.079 57.895 0.00 0.00 42.00 4.40
3531 4316 1.078848 AGCCGTCTTGGATGTGCTC 60.079 57.895 0.00 0.00 42.00 4.26
3532 4317 1.375908 GCCGTCTTGGATGTGCTCA 60.376 57.895 0.00 0.00 42.00 4.26
3534 4319 1.742761 CCGTCTTGGATGTGCTCATT 58.257 50.000 2.26 0.00 42.00 2.57
3536 4321 2.489329 CCGTCTTGGATGTGCTCATTTT 59.511 45.455 2.26 0.00 42.00 1.82
3537 4322 3.495193 CGTCTTGGATGTGCTCATTTTG 58.505 45.455 2.26 0.00 34.06 2.44
3538 4323 3.058016 CGTCTTGGATGTGCTCATTTTGT 60.058 43.478 2.26 0.00 34.06 2.83
3539 4324 4.154015 CGTCTTGGATGTGCTCATTTTGTA 59.846 41.667 2.26 0.00 34.06 2.41
3541 4326 6.032094 GTCTTGGATGTGCTCATTTTGTATG 58.968 40.000 2.26 0.00 34.06 2.39
3542 4327 5.711506 TCTTGGATGTGCTCATTTTGTATGT 59.288 36.000 2.26 0.00 34.06 2.29
3543 4328 5.981088 TGGATGTGCTCATTTTGTATGTT 57.019 34.783 2.26 0.00 34.06 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 1.687612 CTGCCACTCCCTGTTCCAT 59.312 57.895 0.00 0.00 0.00 3.41
148 865 2.967397 GATCACCACGTGTCCCGA 59.033 61.111 15.65 5.39 40.70 5.14
207 925 0.393132 GGTTTACTGCTGGGCTCTCC 60.393 60.000 0.00 0.00 0.00 3.71
228 946 2.109181 GGATTTCTCGCCTCGGGG 59.891 66.667 0.00 0.00 0.00 5.73
239 957 2.178273 GCGTGCGGTTGGGATTTC 59.822 61.111 0.00 0.00 0.00 2.17
266 987 2.797866 CTAGCGGTACTATGCGCGGG 62.798 65.000 8.83 0.00 35.87 6.13
273 994 4.519213 CCAGATCTAGCTAGCGGTACTAT 58.481 47.826 16.35 2.15 0.00 2.12
281 1002 1.243902 AGTCGCCAGATCTAGCTAGC 58.756 55.000 16.35 6.62 0.00 3.42
377 1098 4.202253 GGGGAAATGATAAATGCTTCACCC 60.202 45.833 0.00 0.00 34.12 4.61
479 1200 1.669760 GGTCATCGACACGGCCAAA 60.670 57.895 2.24 0.00 33.68 3.28
558 1282 3.357079 CCCGGTGCAGTGCAGAAC 61.357 66.667 20.42 11.11 40.08 3.01
565 1289 2.144738 ACAGGTAACCCGGTGCAGT 61.145 57.895 0.00 0.00 37.79 4.40
566 1290 2.747686 ACAGGTAACCCGGTGCAG 59.252 61.111 0.00 0.00 37.79 4.41
570 1294 1.459921 TCACCACAGGTAACCCGGT 60.460 57.895 0.00 0.00 40.03 5.28
571 1295 1.295423 CTCACCACAGGTAACCCGG 59.705 63.158 0.00 0.00 32.11 5.73
572 1296 1.295423 CCTCACCACAGGTAACCCG 59.705 63.158 0.00 0.00 32.11 5.28
586 1310 4.231753 CGTACGAAACGTGCCTCA 57.768 55.556 10.44 0.00 46.72 3.86
597 1321 3.740397 CCCACCGTCAGCGTACGA 61.740 66.667 21.65 0.00 45.68 3.43
615 1339 1.618074 GGGACCCACGTAACTCCTAGT 60.618 57.143 5.33 0.00 0.00 2.57
618 1342 1.980772 CGGGACCCACGTAACTCCT 60.981 63.158 12.15 0.00 0.00 3.69
619 1343 2.575461 CGGGACCCACGTAACTCC 59.425 66.667 12.15 0.00 0.00 3.85
622 1346 2.104253 CATGCGGGACCCACGTAAC 61.104 63.158 12.15 0.00 0.00 2.50
623 1347 2.266372 CATGCGGGACCCACGTAA 59.734 61.111 12.15 0.00 0.00 3.18
643 1367 0.313043 TCGTCTCCACGTTTCAGACC 59.687 55.000 11.06 0.00 46.76 3.85
682 1406 3.861276 AGTGACACGGTTGATATTCGA 57.139 42.857 0.00 0.00 0.00 3.71
716 1440 1.019278 ATCGCGCTTTTCACGTCCAT 61.019 50.000 5.56 0.00 0.00 3.41
719 1443 0.516524 GTCATCGCGCTTTTCACGTC 60.517 55.000 5.56 0.00 0.00 4.34
725 1449 0.168788 CCACATGTCATCGCGCTTTT 59.831 50.000 5.56 0.00 0.00 2.27
729 1453 1.835483 GATCCCACATGTCATCGCGC 61.835 60.000 0.00 0.00 0.00 6.86
733 1457 1.224069 CGCCGATCCCACATGTCATC 61.224 60.000 0.00 0.00 0.00 2.92
836 1560 3.675228 CGACGATATTTAATCCCCTCCCG 60.675 52.174 0.00 0.00 0.00 5.14
856 1580 0.976073 GTTGGGATGGTCTCCTCCGA 60.976 60.000 0.00 0.00 44.28 4.55
857 1581 1.522569 GTTGGGATGGTCTCCTCCG 59.477 63.158 0.00 0.00 44.28 4.63
986 1710 2.795175 AGACATATACGAGCGGTTGG 57.205 50.000 6.83 0.00 0.00 3.77
988 1712 4.360563 CAAGAAGACATATACGAGCGGTT 58.639 43.478 0.00 0.00 0.00 4.44
990 1714 2.726760 GCAAGAAGACATATACGAGCGG 59.273 50.000 0.00 0.00 0.00 5.52
1176 1914 4.391830 CGAAAAAGATGAGGAATTGACGGA 59.608 41.667 0.00 0.00 0.00 4.69
1186 1924 1.429423 GGCGGCGAAAAAGATGAGG 59.571 57.895 12.98 0.00 0.00 3.86
1228 1976 1.347378 CCCCATGAAAAACCCACCAAG 59.653 52.381 0.00 0.00 0.00 3.61
1231 1979 1.346395 GAACCCCATGAAAAACCCACC 59.654 52.381 0.00 0.00 0.00 4.61
1232 1980 2.037121 CAGAACCCCATGAAAAACCCAC 59.963 50.000 0.00 0.00 0.00 4.61
1237 1985 2.158593 TCCGTCAGAACCCCATGAAAAA 60.159 45.455 0.00 0.00 0.00 1.94
1242 1990 0.464373 CCATCCGTCAGAACCCCATG 60.464 60.000 0.00 0.00 0.00 3.66
1243 1991 0.620410 TCCATCCGTCAGAACCCCAT 60.620 55.000 0.00 0.00 0.00 4.00
1244 1992 0.620410 ATCCATCCGTCAGAACCCCA 60.620 55.000 0.00 0.00 0.00 4.96
1245 1993 0.546598 AATCCATCCGTCAGAACCCC 59.453 55.000 0.00 0.00 0.00 4.95
1246 1994 1.486726 AGAATCCATCCGTCAGAACCC 59.513 52.381 0.00 0.00 0.00 4.11
1247 1995 2.939103 CAAGAATCCATCCGTCAGAACC 59.061 50.000 0.00 0.00 0.00 3.62
1248 1996 2.352960 GCAAGAATCCATCCGTCAGAAC 59.647 50.000 0.00 0.00 0.00 3.01
1249 1997 2.237143 AGCAAGAATCCATCCGTCAGAA 59.763 45.455 0.00 0.00 0.00 3.02
1250 1998 1.833630 AGCAAGAATCCATCCGTCAGA 59.166 47.619 0.00 0.00 0.00 3.27
1251 1999 2.208431 GAGCAAGAATCCATCCGTCAG 58.792 52.381 0.00 0.00 0.00 3.51
1252 2000 1.134401 GGAGCAAGAATCCATCCGTCA 60.134 52.381 0.00 0.00 36.79 4.35
1253 2001 1.139853 AGGAGCAAGAATCCATCCGTC 59.860 52.381 0.00 0.00 39.47 4.79
1254 2002 1.139853 GAGGAGCAAGAATCCATCCGT 59.860 52.381 0.00 0.00 39.47 4.69
1255 2003 1.415659 AGAGGAGCAAGAATCCATCCG 59.584 52.381 0.00 0.00 39.47 4.18
1256 2004 3.212685 CAAGAGGAGCAAGAATCCATCC 58.787 50.000 0.00 0.00 39.47 3.51
1279 2031 4.020617 CCCGTCCCTGCAGCAGAA 62.021 66.667 24.90 8.69 32.44 3.02
1281 2033 4.335647 AACCCGTCCCTGCAGCAG 62.336 66.667 16.23 16.23 0.00 4.24
1371 2123 2.953669 ATTTCGACGGACGGAATCG 58.046 52.632 0.53 0.00 45.77 3.34
1388 2140 5.736207 GCTTTTTCTCTCGGGTGTCAAAAAT 60.736 40.000 0.00 0.00 0.00 1.82
1393 2145 1.416401 AGCTTTTTCTCTCGGGTGTCA 59.584 47.619 0.00 0.00 0.00 3.58
1394 2146 1.801178 CAGCTTTTTCTCTCGGGTGTC 59.199 52.381 0.00 0.00 0.00 3.67
1395 2147 1.141053 ACAGCTTTTTCTCTCGGGTGT 59.859 47.619 0.00 0.00 34.48 4.16
1396 2148 1.801178 GACAGCTTTTTCTCTCGGGTG 59.199 52.381 0.00 0.00 0.00 4.61
1397 2149 1.270893 GGACAGCTTTTTCTCTCGGGT 60.271 52.381 0.00 0.00 0.00 5.28
1400 2152 1.002544 AGGGGACAGCTTTTTCTCTCG 59.997 52.381 0.00 0.00 0.00 4.04
1412 2167 4.354662 ACTCTACTAGGAAAAGGGGACAG 58.645 47.826 0.00 0.00 0.00 3.51
1443 2198 5.294306 CACTGACTGACTAGCAAAACTGAAA 59.706 40.000 0.00 0.00 0.00 2.69
1476 2233 1.684450 GGATCCTCCTCGTCTTCTTCC 59.316 57.143 3.84 0.00 32.53 3.46
1485 2242 2.341543 CGCCATGGATCCTCCTCG 59.658 66.667 18.40 2.36 37.46 4.63
1505 2263 2.343506 CATGTGGTGCTGGCTCAAA 58.656 52.632 0.00 0.00 0.00 2.69
1703 2461 3.364249 CTCCTCGTCGTCGGTGTCG 62.364 68.421 1.55 0.00 37.69 4.35
2072 2830 2.818487 CGGTGTTGTTGACGCAGCA 61.818 57.895 0.00 0.00 40.59 4.41
2177 2935 2.669569 GCTGGCTTCGTGGCTTCA 60.670 61.111 6.35 0.00 42.34 3.02
2186 2944 0.463474 GGGACTCATCTGCTGGCTTC 60.463 60.000 0.00 0.00 0.00 3.86
2197 2955 1.305297 TCAGGCGACAGGGACTCAT 60.305 57.895 0.00 0.00 34.60 2.90
2267 3040 1.079750 GAACTCTGGGTCGTCAGGC 60.080 63.158 0.00 0.00 35.58 4.85
2303 3076 4.069232 TCCGGCAGCTGAAGACCG 62.069 66.667 20.43 20.09 45.21 4.79
2432 3205 1.153549 GTCCATGTCCAGGTCGAGC 60.154 63.158 6.48 6.48 0.00 5.03
2438 3211 1.257750 TGTCGAGGTCCATGTCCAGG 61.258 60.000 6.89 0.00 0.00 4.45
2495 3268 3.541950 ATCATCCATGCCTCGGCCG 62.542 63.158 22.12 22.12 41.09 6.13
2522 3295 0.241749 ACACGCAGAAATCGACGGTA 59.758 50.000 0.00 0.00 0.00 4.02
2583 3357 0.377203 CGGCTGGAAAACGCTATTCC 59.623 55.000 7.35 7.35 45.39 3.01
2584 3358 0.377203 CCGGCTGGAAAACGCTATTC 59.623 55.000 5.28 0.00 37.49 1.75
2585 3359 0.322187 ACCGGCTGGAAAACGCTATT 60.322 50.000 21.41 0.00 39.21 1.73
2586 3360 0.322187 AACCGGCTGGAAAACGCTAT 60.322 50.000 21.41 0.00 39.21 2.97
2587 3361 0.321021 TAACCGGCTGGAAAACGCTA 59.679 50.000 21.41 0.00 39.21 4.26
2588 3362 1.071814 TAACCGGCTGGAAAACGCT 59.928 52.632 21.41 0.00 39.21 5.07
2589 3363 1.208358 GTAACCGGCTGGAAAACGC 59.792 57.895 21.41 0.00 39.21 4.84
2590 3364 0.236449 GTGTAACCGGCTGGAAAACG 59.764 55.000 21.41 0.00 39.21 3.60
2591 3365 1.601166 AGTGTAACCGGCTGGAAAAC 58.399 50.000 21.41 13.27 37.80 2.43
2592 3366 1.950909 CAAGTGTAACCGGCTGGAAAA 59.049 47.619 21.41 0.00 37.80 2.29
2593 3367 1.134037 ACAAGTGTAACCGGCTGGAAA 60.134 47.619 21.41 1.91 37.80 3.13
2594 3368 0.470766 ACAAGTGTAACCGGCTGGAA 59.529 50.000 21.41 2.35 37.80 3.53
2595 3369 1.340088 TACAAGTGTAACCGGCTGGA 58.660 50.000 21.41 0.00 37.80 3.86
2596 3370 2.172851 TTACAAGTGTAACCGGCTGG 57.827 50.000 11.02 11.02 37.80 4.85
2597 3371 4.759516 ATTTTACAAGTGTAACCGGCTG 57.240 40.909 0.00 0.00 39.92 4.85
2598 3372 5.307204 TGTATTTTACAAGTGTAACCGGCT 58.693 37.500 0.00 0.00 39.92 5.52
2599 3373 5.610235 TGTATTTTACAAGTGTAACCGGC 57.390 39.130 0.00 0.00 39.92 6.13
2600 3374 5.391203 GGCTGTATTTTACAAGTGTAACCGG 60.391 44.000 0.00 0.00 39.92 5.28
2601 3375 5.391203 GGGCTGTATTTTACAAGTGTAACCG 60.391 44.000 3.38 0.00 39.92 4.44
2602 3376 5.106038 GGGGCTGTATTTTACAAGTGTAACC 60.106 44.000 3.38 0.82 39.92 2.85
2603 3377 5.391203 CGGGGCTGTATTTTACAAGTGTAAC 60.391 44.000 3.38 0.00 39.92 2.50
2604 3378 4.696402 CGGGGCTGTATTTTACAAGTGTAA 59.304 41.667 0.00 0.00 38.38 2.41
2605 3379 4.255301 CGGGGCTGTATTTTACAAGTGTA 58.745 43.478 0.00 0.00 38.38 2.90
2606 3380 3.078837 CGGGGCTGTATTTTACAAGTGT 58.921 45.455 0.00 0.00 38.38 3.55
2607 3381 3.078837 ACGGGGCTGTATTTTACAAGTG 58.921 45.455 0.00 0.00 38.38 3.16
2608 3382 3.428413 ACGGGGCTGTATTTTACAAGT 57.572 42.857 0.00 0.00 38.38 3.16
2609 3383 5.181622 TGTTTACGGGGCTGTATTTTACAAG 59.818 40.000 0.00 0.00 38.38 3.16
2610 3384 5.068636 TGTTTACGGGGCTGTATTTTACAA 58.931 37.500 0.00 0.00 38.38 2.41
2611 3385 4.649692 TGTTTACGGGGCTGTATTTTACA 58.350 39.130 0.00 0.00 37.13 2.41
2612 3386 5.625921 TTGTTTACGGGGCTGTATTTTAC 57.374 39.130 0.00 0.00 0.00 2.01
2613 3387 6.445475 GTTTTGTTTACGGGGCTGTATTTTA 58.555 36.000 0.00 0.00 0.00 1.52
2614 3388 5.291178 GTTTTGTTTACGGGGCTGTATTTT 58.709 37.500 0.00 0.00 0.00 1.82
2615 3389 4.262121 GGTTTTGTTTACGGGGCTGTATTT 60.262 41.667 0.00 0.00 0.00 1.40
2616 3390 3.256383 GGTTTTGTTTACGGGGCTGTATT 59.744 43.478 0.00 0.00 0.00 1.89
2617 3391 2.821378 GGTTTTGTTTACGGGGCTGTAT 59.179 45.455 0.00 0.00 0.00 2.29
2618 3392 2.228925 GGTTTTGTTTACGGGGCTGTA 58.771 47.619 0.00 0.00 0.00 2.74
2619 3393 1.034356 GGTTTTGTTTACGGGGCTGT 58.966 50.000 0.00 0.00 0.00 4.40
2620 3394 0.039888 CGGTTTTGTTTACGGGGCTG 60.040 55.000 0.00 0.00 0.00 4.85
2621 3395 1.174078 CCGGTTTTGTTTACGGGGCT 61.174 55.000 0.00 0.00 42.48 5.19
2622 3396 1.286570 CCGGTTTTGTTTACGGGGC 59.713 57.895 0.00 0.00 42.48 5.80
2626 3400 1.669779 TGTCCACCGGTTTTGTTTACG 59.330 47.619 2.97 0.00 0.00 3.18
2627 3401 3.377798 TCTTGTCCACCGGTTTTGTTTAC 59.622 43.478 2.97 0.00 0.00 2.01
2628 3402 3.377798 GTCTTGTCCACCGGTTTTGTTTA 59.622 43.478 2.97 0.00 0.00 2.01
2629 3403 2.164827 GTCTTGTCCACCGGTTTTGTTT 59.835 45.455 2.97 0.00 0.00 2.83
2630 3404 1.746787 GTCTTGTCCACCGGTTTTGTT 59.253 47.619 2.97 0.00 0.00 2.83
2631 3405 1.385528 GTCTTGTCCACCGGTTTTGT 58.614 50.000 2.97 0.00 0.00 2.83
2632 3406 0.306533 CGTCTTGTCCACCGGTTTTG 59.693 55.000 2.97 0.00 0.00 2.44
2633 3407 0.178533 TCGTCTTGTCCACCGGTTTT 59.821 50.000 2.97 0.00 0.00 2.43
2634 3408 0.531311 GTCGTCTTGTCCACCGGTTT 60.531 55.000 2.97 0.00 0.00 3.27
2635 3409 1.068585 GTCGTCTTGTCCACCGGTT 59.931 57.895 2.97 0.00 0.00 4.44
2636 3410 2.732658 GTCGTCTTGTCCACCGGT 59.267 61.111 0.00 0.00 0.00 5.28
2637 3411 2.048503 GGTCGTCTTGTCCACCGG 60.049 66.667 0.00 0.00 0.00 5.28
2638 3412 1.372997 CAGGTCGTCTTGTCCACCG 60.373 63.158 0.00 0.00 33.78 4.94
2639 3413 1.004918 CCAGGTCGTCTTGTCCACC 60.005 63.158 0.00 0.00 0.00 4.61
2640 3414 1.668151 GCCAGGTCGTCTTGTCCAC 60.668 63.158 0.00 0.00 0.00 4.02
2641 3415 2.741092 GCCAGGTCGTCTTGTCCA 59.259 61.111 0.00 0.00 0.00 4.02
2642 3416 2.432628 CGCCAGGTCGTCTTGTCC 60.433 66.667 0.00 0.00 0.00 4.02
2643 3417 3.112709 GCGCCAGGTCGTCTTGTC 61.113 66.667 0.00 0.00 0.00 3.18
2644 3418 3.165160 AAGCGCCAGGTCGTCTTGT 62.165 57.895 2.29 0.00 0.00 3.16
2645 3419 2.357517 AAGCGCCAGGTCGTCTTG 60.358 61.111 2.29 0.00 0.00 3.02
2646 3420 2.357517 CAAGCGCCAGGTCGTCTT 60.358 61.111 2.29 6.27 0.00 3.01
2647 3421 4.379243 CCAAGCGCCAGGTCGTCT 62.379 66.667 2.29 1.29 0.00 4.18
2648 3422 3.876589 TTCCAAGCGCCAGGTCGTC 62.877 63.158 14.57 0.00 0.00 4.20
2649 3423 3.936203 TTCCAAGCGCCAGGTCGT 61.936 61.111 14.57 0.00 0.00 4.34
2650 3424 3.423154 GTTCCAAGCGCCAGGTCG 61.423 66.667 14.57 0.00 0.00 4.79
2651 3425 3.423154 CGTTCCAAGCGCCAGGTC 61.423 66.667 14.57 8.90 0.00 3.85
2652 3426 4.250305 ACGTTCCAAGCGCCAGGT 62.250 61.111 14.57 0.00 0.00 4.00
2653 3427 3.423154 GACGTTCCAAGCGCCAGG 61.423 66.667 2.29 6.58 0.00 4.45
2654 3428 3.777925 CGACGTTCCAAGCGCCAG 61.778 66.667 2.29 0.00 0.00 4.85
2655 3429 2.495366 ATACGACGTTCCAAGCGCCA 62.495 55.000 5.50 0.00 0.00 5.69
2656 3430 1.749609 GATACGACGTTCCAAGCGCC 61.750 60.000 5.50 0.00 0.00 6.53
2657 3431 1.074319 TGATACGACGTTCCAAGCGC 61.074 55.000 5.50 0.00 0.00 5.92
2658 3432 0.638746 GTGATACGACGTTCCAAGCG 59.361 55.000 5.50 0.00 0.00 4.68
2659 3433 0.638746 CGTGATACGACGTTCCAAGC 59.361 55.000 5.50 0.00 46.05 4.01
2660 3434 2.251869 TCGTGATACGACGTTCCAAG 57.748 50.000 5.50 7.31 46.73 3.61
2667 3441 7.252768 CGTAATAATTACCATCGTGATACGACG 60.253 40.741 6.17 0.00 42.15 5.12
2668 3442 7.460637 GCGTAATAATTACCATCGTGATACGAC 60.461 40.741 6.17 0.00 42.15 4.34
2669 3443 6.524239 GCGTAATAATTACCATCGTGATACGA 59.476 38.462 6.51 6.51 42.88 3.43
2670 3444 6.237384 GGCGTAATAATTACCATCGTGATACG 60.237 42.308 0.00 0.00 36.50 3.06
2671 3445 6.810182 AGGCGTAATAATTACCATCGTGATAC 59.190 38.462 0.00 0.00 32.49 2.24
2672 3446 6.809689 CAGGCGTAATAATTACCATCGTGATA 59.190 38.462 0.00 0.00 32.49 2.15
2673 3447 5.637810 CAGGCGTAATAATTACCATCGTGAT 59.362 40.000 0.00 0.00 32.49 3.06
2674 3448 4.986034 CAGGCGTAATAATTACCATCGTGA 59.014 41.667 0.00 0.00 32.49 4.35
2675 3449 4.748102 ACAGGCGTAATAATTACCATCGTG 59.252 41.667 0.00 0.00 32.49 4.35
2676 3450 4.952460 ACAGGCGTAATAATTACCATCGT 58.048 39.130 0.00 0.00 32.49 3.73
2677 3451 5.917541 AACAGGCGTAATAATTACCATCG 57.082 39.130 0.00 0.00 32.49 3.84
2678 3452 6.485648 AGGAAACAGGCGTAATAATTACCATC 59.514 38.462 0.00 0.00 32.49 3.51
2679 3453 6.362248 AGGAAACAGGCGTAATAATTACCAT 58.638 36.000 0.00 0.00 32.49 3.55
2680 3454 5.747342 AGGAAACAGGCGTAATAATTACCA 58.253 37.500 0.00 0.00 32.49 3.25
2681 3455 5.818857 TGAGGAAACAGGCGTAATAATTACC 59.181 40.000 0.00 0.00 32.49 2.85
2682 3456 6.913873 TGAGGAAACAGGCGTAATAATTAC 57.086 37.500 0.00 0.00 0.00 1.89
2683 3457 7.925043 TTTGAGGAAACAGGCGTAATAATTA 57.075 32.000 0.00 0.00 0.00 1.40
2684 3458 6.827586 TTTGAGGAAACAGGCGTAATAATT 57.172 33.333 0.00 0.00 0.00 1.40
2685 3459 7.554835 TGTATTTGAGGAAACAGGCGTAATAAT 59.445 33.333 0.00 0.00 0.00 1.28
2686 3460 6.879993 TGTATTTGAGGAAACAGGCGTAATAA 59.120 34.615 0.00 0.00 0.00 1.40
2687 3461 6.314400 GTGTATTTGAGGAAACAGGCGTAATA 59.686 38.462 0.00 0.00 0.00 0.98
2688 3462 5.123344 GTGTATTTGAGGAAACAGGCGTAAT 59.877 40.000 0.00 0.00 0.00 1.89
2689 3463 4.453136 GTGTATTTGAGGAAACAGGCGTAA 59.547 41.667 0.00 0.00 0.00 3.18
2690 3464 3.998341 GTGTATTTGAGGAAACAGGCGTA 59.002 43.478 0.00 0.00 0.00 4.42
2691 3465 2.812011 GTGTATTTGAGGAAACAGGCGT 59.188 45.455 0.00 0.00 0.00 5.68
2692 3466 2.161609 GGTGTATTTGAGGAAACAGGCG 59.838 50.000 0.00 0.00 0.00 5.52
2693 3467 2.161609 CGGTGTATTTGAGGAAACAGGC 59.838 50.000 0.00 0.00 0.00 4.85
2694 3468 2.747446 CCGGTGTATTTGAGGAAACAGG 59.253 50.000 0.00 0.00 0.00 4.00
2695 3469 3.408634 ACCGGTGTATTTGAGGAAACAG 58.591 45.455 6.12 0.00 0.00 3.16
2696 3470 3.495434 ACCGGTGTATTTGAGGAAACA 57.505 42.857 6.12 0.00 0.00 2.83
2697 3471 5.163693 CCATTACCGGTGTATTTGAGGAAAC 60.164 44.000 19.93 0.00 0.00 2.78
2698 3472 4.944930 CCATTACCGGTGTATTTGAGGAAA 59.055 41.667 19.93 0.00 0.00 3.13
2699 3473 4.519213 CCATTACCGGTGTATTTGAGGAA 58.481 43.478 19.93 0.00 0.00 3.36
2700 3474 3.118186 CCCATTACCGGTGTATTTGAGGA 60.118 47.826 19.93 0.00 0.00 3.71
2701 3475 3.211045 CCCATTACCGGTGTATTTGAGG 58.789 50.000 19.93 7.86 0.00 3.86
2702 3476 2.616842 GCCCATTACCGGTGTATTTGAG 59.383 50.000 19.93 0.00 0.00 3.02
2703 3477 2.240160 AGCCCATTACCGGTGTATTTGA 59.760 45.455 19.93 0.00 0.00 2.69
2704 3478 2.357637 CAGCCCATTACCGGTGTATTTG 59.642 50.000 19.93 7.20 0.00 2.32
2705 3479 2.650322 CAGCCCATTACCGGTGTATTT 58.350 47.619 19.93 0.00 0.00 1.40
2706 3480 1.133915 CCAGCCCATTACCGGTGTATT 60.134 52.381 19.93 0.00 0.00 1.89
2707 3481 0.472471 CCAGCCCATTACCGGTGTAT 59.528 55.000 19.93 7.87 0.00 2.29
2708 3482 0.910566 ACCAGCCCATTACCGGTGTA 60.911 55.000 19.93 5.37 0.00 2.90
2709 3483 0.910566 TACCAGCCCATTACCGGTGT 60.911 55.000 19.93 5.41 0.00 4.16
2710 3484 0.472471 ATACCAGCCCATTACCGGTG 59.528 55.000 19.93 0.00 0.00 4.94
2711 3485 2.106187 TATACCAGCCCATTACCGGT 57.894 50.000 13.98 13.98 0.00 5.28
2712 3486 2.569853 TCATATACCAGCCCATTACCGG 59.430 50.000 0.00 0.00 0.00 5.28
2713 3487 3.973206 TCATATACCAGCCCATTACCG 57.027 47.619 0.00 0.00 0.00 4.02
2714 3488 6.308015 TGTATCATATACCAGCCCATTACC 57.692 41.667 0.00 0.00 0.00 2.85
2715 3489 6.260936 GCATGTATCATATACCAGCCCATTAC 59.739 42.308 0.00 0.00 0.00 1.89
2716 3490 6.356556 GCATGTATCATATACCAGCCCATTA 58.643 40.000 0.00 0.00 0.00 1.90
2717 3491 5.195940 GCATGTATCATATACCAGCCCATT 58.804 41.667 0.00 0.00 0.00 3.16
2718 3492 4.385643 GGCATGTATCATATACCAGCCCAT 60.386 45.833 14.27 0.00 33.22 4.00
2719 3493 3.054434 GGCATGTATCATATACCAGCCCA 60.054 47.826 14.27 0.00 33.22 5.36
2720 3494 3.200825 AGGCATGTATCATATACCAGCCC 59.799 47.826 18.51 5.98 37.19 5.19
2721 3495 4.080919 TGAGGCATGTATCATATACCAGCC 60.081 45.833 16.15 16.15 36.93 4.85
2722 3496 5.089970 TGAGGCATGTATCATATACCAGC 57.910 43.478 0.00 0.00 0.00 4.85
2723 3497 5.114780 GCTGAGGCATGTATCATATACCAG 58.885 45.833 0.00 0.00 38.54 4.00
2724 3498 4.381932 CGCTGAGGCATGTATCATATACCA 60.382 45.833 0.00 0.00 38.60 3.25
2725 3499 4.115516 CGCTGAGGCATGTATCATATACC 58.884 47.826 0.00 0.00 38.60 2.73
2726 3500 3.553511 GCGCTGAGGCATGTATCATATAC 59.446 47.826 0.00 0.00 38.60 1.47
2727 3501 3.195396 TGCGCTGAGGCATGTATCATATA 59.805 43.478 9.73 0.00 38.17 0.86
2728 3502 2.027837 TGCGCTGAGGCATGTATCATAT 60.028 45.455 9.73 0.00 38.17 1.78
2729 3503 1.344114 TGCGCTGAGGCATGTATCATA 59.656 47.619 9.73 0.00 38.17 2.15
2730 3504 0.107268 TGCGCTGAGGCATGTATCAT 59.893 50.000 9.73 0.00 38.17 2.45
2731 3505 1.521616 TGCGCTGAGGCATGTATCA 59.478 52.632 9.73 0.00 38.17 2.15
2732 3506 4.443857 TGCGCTGAGGCATGTATC 57.556 55.556 9.73 0.00 38.17 2.24
2739 3513 0.880278 TAAATCCGATGCGCTGAGGC 60.880 55.000 9.73 0.00 0.00 4.70
2740 3514 0.861837 GTAAATCCGATGCGCTGAGG 59.138 55.000 9.73 9.21 0.00 3.86
2741 3515 1.570813 TGTAAATCCGATGCGCTGAG 58.429 50.000 9.73 0.00 0.00 3.35
2742 3516 2.017138 TTGTAAATCCGATGCGCTGA 57.983 45.000 9.73 0.00 0.00 4.26
2743 3517 2.823196 TTTGTAAATCCGATGCGCTG 57.177 45.000 9.73 0.00 0.00 5.18
2744 3518 3.874543 TGTATTTGTAAATCCGATGCGCT 59.125 39.130 9.73 0.00 0.00 5.92
2745 3519 4.203950 TGTATTTGTAAATCCGATGCGC 57.796 40.909 0.00 0.00 0.00 6.09
2746 3520 4.967575 GGTTGTATTTGTAAATCCGATGCG 59.032 41.667 0.00 0.00 0.00 4.73
2747 3521 5.278604 GGGTTGTATTTGTAAATCCGATGC 58.721 41.667 0.00 0.00 0.00 3.91
2748 3522 5.065474 ACGGGTTGTATTTGTAAATCCGATG 59.935 40.000 12.84 1.64 35.54 3.84
2749 3523 5.065474 CACGGGTTGTATTTGTAAATCCGAT 59.935 40.000 12.84 0.00 35.54 4.18
2750 3524 4.392445 CACGGGTTGTATTTGTAAATCCGA 59.608 41.667 12.84 0.00 35.54 4.55
2751 3525 4.154556 ACACGGGTTGTATTTGTAAATCCG 59.845 41.667 4.86 4.86 36.32 4.18
2752 3526 5.181622 TGACACGGGTTGTATTTGTAAATCC 59.818 40.000 0.00 0.00 39.17 3.01
2753 3527 6.243811 TGACACGGGTTGTATTTGTAAATC 57.756 37.500 0.00 0.00 39.17 2.17
2754 3528 6.207810 ACATGACACGGGTTGTATTTGTAAAT 59.792 34.615 0.00 0.00 39.17 1.40
2755 3529 5.531659 ACATGACACGGGTTGTATTTGTAAA 59.468 36.000 0.00 0.00 39.17 2.01
2756 3530 5.064558 ACATGACACGGGTTGTATTTGTAA 58.935 37.500 0.00 0.00 39.17 2.41
2757 3531 4.643463 ACATGACACGGGTTGTATTTGTA 58.357 39.130 0.00 0.00 39.17 2.41
2758 3532 3.482436 ACATGACACGGGTTGTATTTGT 58.518 40.909 0.00 0.00 39.17 2.83
2759 3533 5.811399 ATACATGACACGGGTTGTATTTG 57.189 39.130 8.96 0.00 39.17 2.32
2760 3534 6.657541 AGAAATACATGACACGGGTTGTATTT 59.342 34.615 28.26 28.26 45.05 1.40
2761 3535 6.177610 AGAAATACATGACACGGGTTGTATT 58.822 36.000 18.05 18.05 40.26 1.89
2762 3536 5.741011 AGAAATACATGACACGGGTTGTAT 58.259 37.500 8.96 8.96 39.17 2.29
2763 3537 5.155278 AGAAATACATGACACGGGTTGTA 57.845 39.130 4.88 4.88 39.17 2.41
2764 3538 4.015872 AGAAATACATGACACGGGTTGT 57.984 40.909 0.00 0.12 43.10 3.32
2765 3539 5.153513 CAAAGAAATACATGACACGGGTTG 58.846 41.667 0.00 0.00 0.00 3.77
2766 3540 4.217550 CCAAAGAAATACATGACACGGGTT 59.782 41.667 0.00 0.00 0.00 4.11
2767 3541 3.756434 CCAAAGAAATACATGACACGGGT 59.244 43.478 0.00 0.00 0.00 5.28
2768 3542 3.128589 CCCAAAGAAATACATGACACGGG 59.871 47.826 0.00 0.00 0.00 5.28
2769 3543 4.006989 TCCCAAAGAAATACATGACACGG 58.993 43.478 0.00 0.00 0.00 4.94
2770 3544 5.390613 GTTCCCAAAGAAATACATGACACG 58.609 41.667 0.00 0.00 35.85 4.49
2771 3545 5.242838 TGGTTCCCAAAGAAATACATGACAC 59.757 40.000 0.00 0.00 35.85 3.67
2772 3546 5.389520 TGGTTCCCAAAGAAATACATGACA 58.610 37.500 0.00 0.00 35.85 3.58
2773 3547 5.476945 ACTGGTTCCCAAAGAAATACATGAC 59.523 40.000 0.00 0.00 35.85 3.06
2774 3548 5.640147 ACTGGTTCCCAAAGAAATACATGA 58.360 37.500 0.00 0.00 35.85 3.07
2775 3549 5.982890 ACTGGTTCCCAAAGAAATACATG 57.017 39.130 0.00 0.00 35.85 3.21
2776 3550 9.936329 ATATTACTGGTTCCCAAAGAAATACAT 57.064 29.630 0.00 0.00 35.85 2.29
2777 3551 9.184523 CATATTACTGGTTCCCAAAGAAATACA 57.815 33.333 0.00 0.00 35.85 2.29
2778 3552 8.135529 GCATATTACTGGTTCCCAAAGAAATAC 58.864 37.037 0.00 0.00 35.85 1.89
2779 3553 7.836685 TGCATATTACTGGTTCCCAAAGAAATA 59.163 33.333 0.00 0.00 35.85 1.40
2780 3554 6.667414 TGCATATTACTGGTTCCCAAAGAAAT 59.333 34.615 0.00 0.00 35.85 2.17
2781 3555 6.013379 TGCATATTACTGGTTCCCAAAGAAA 58.987 36.000 0.00 0.00 35.85 2.52
2782 3556 5.575157 TGCATATTACTGGTTCCCAAAGAA 58.425 37.500 0.00 0.00 30.80 2.52
2783 3557 5.186256 TGCATATTACTGGTTCCCAAAGA 57.814 39.130 0.00 0.00 30.80 2.52
2784 3558 5.418840 ACTTGCATATTACTGGTTCCCAAAG 59.581 40.000 0.00 0.00 30.80 2.77
2785 3559 5.184864 CACTTGCATATTACTGGTTCCCAAA 59.815 40.000 0.00 0.00 30.80 3.28
2786 3560 4.704540 CACTTGCATATTACTGGTTCCCAA 59.295 41.667 0.00 0.00 30.80 4.12
2787 3561 4.263727 ACACTTGCATATTACTGGTTCCCA 60.264 41.667 0.00 0.00 0.00 4.37
2788 3562 4.270008 ACACTTGCATATTACTGGTTCCC 58.730 43.478 0.00 0.00 0.00 3.97
2789 3563 6.346096 TCTACACTTGCATATTACTGGTTCC 58.654 40.000 0.00 0.00 0.00 3.62
2790 3564 7.549488 ACTTCTACACTTGCATATTACTGGTTC 59.451 37.037 0.00 0.00 0.00 3.62
2791 3565 7.394816 ACTTCTACACTTGCATATTACTGGTT 58.605 34.615 0.00 0.00 0.00 3.67
2792 3566 6.947464 ACTTCTACACTTGCATATTACTGGT 58.053 36.000 0.00 0.00 0.00 4.00
2793 3567 7.849804 AACTTCTACACTTGCATATTACTGG 57.150 36.000 0.00 0.00 0.00 4.00
2795 3569 9.084164 CGTAAACTTCTACACTTGCATATTACT 57.916 33.333 0.00 0.00 0.00 2.24
2796 3570 8.325997 CCGTAAACTTCTACACTTGCATATTAC 58.674 37.037 0.00 0.00 0.00 1.89
2797 3571 7.493320 CCCGTAAACTTCTACACTTGCATATTA 59.507 37.037 0.00 0.00 0.00 0.98
2798 3572 6.315393 CCCGTAAACTTCTACACTTGCATATT 59.685 38.462 0.00 0.00 0.00 1.28
2799 3573 5.815740 CCCGTAAACTTCTACACTTGCATAT 59.184 40.000 0.00 0.00 0.00 1.78
2800 3574 5.172934 CCCGTAAACTTCTACACTTGCATA 58.827 41.667 0.00 0.00 0.00 3.14
2801 3575 4.000988 CCCGTAAACTTCTACACTTGCAT 58.999 43.478 0.00 0.00 0.00 3.96
2802 3576 3.181463 ACCCGTAAACTTCTACACTTGCA 60.181 43.478 0.00 0.00 0.00 4.08
2803 3577 3.185797 CACCCGTAAACTTCTACACTTGC 59.814 47.826 0.00 0.00 0.00 4.01
2804 3578 4.210537 CACACCCGTAAACTTCTACACTTG 59.789 45.833 0.00 0.00 0.00 3.16
2805 3579 4.374399 CACACCCGTAAACTTCTACACTT 58.626 43.478 0.00 0.00 0.00 3.16
2806 3580 3.243975 CCACACCCGTAAACTTCTACACT 60.244 47.826 0.00 0.00 0.00 3.55
2807 3581 3.062042 CCACACCCGTAAACTTCTACAC 58.938 50.000 0.00 0.00 0.00 2.90
2808 3582 2.037511 CCCACACCCGTAAACTTCTACA 59.962 50.000 0.00 0.00 0.00 2.74
2809 3583 2.299867 TCCCACACCCGTAAACTTCTAC 59.700 50.000 0.00 0.00 0.00 2.59
2810 3584 2.607499 TCCCACACCCGTAAACTTCTA 58.393 47.619 0.00 0.00 0.00 2.10
2811 3585 1.426751 TCCCACACCCGTAAACTTCT 58.573 50.000 0.00 0.00 0.00 2.85
2812 3586 2.259266 TTCCCACACCCGTAAACTTC 57.741 50.000 0.00 0.00 0.00 3.01
2813 3587 2.732844 TTTCCCACACCCGTAAACTT 57.267 45.000 0.00 0.00 0.00 2.66
2814 3588 2.963599 ATTTCCCACACCCGTAAACT 57.036 45.000 0.00 0.00 0.00 2.66
2815 3589 3.628942 GGATATTTCCCACACCCGTAAAC 59.371 47.826 0.00 0.00 35.84 2.01
2816 3590 3.682155 CGGATATTTCCCACACCCGTAAA 60.682 47.826 0.00 0.00 39.01 2.01
2817 3591 2.158928 CGGATATTTCCCACACCCGTAA 60.159 50.000 0.00 0.00 39.01 3.18
2818 3592 1.413445 CGGATATTTCCCACACCCGTA 59.587 52.381 0.00 0.00 39.01 4.02
2819 3593 0.179468 CGGATATTTCCCACACCCGT 59.821 55.000 0.00 0.00 39.01 5.28
2820 3594 0.534203 CCGGATATTTCCCACACCCG 60.534 60.000 0.00 0.00 39.01 5.28
2821 3595 0.822121 GCCGGATATTTCCCACACCC 60.822 60.000 5.05 0.00 39.01 4.61
2822 3596 0.106918 TGCCGGATATTTCCCACACC 60.107 55.000 5.05 0.00 39.01 4.16
2823 3597 1.757682 TTGCCGGATATTTCCCACAC 58.242 50.000 5.05 0.00 39.01 3.82
2824 3598 2.582052 GATTGCCGGATATTTCCCACA 58.418 47.619 5.05 0.00 39.01 4.17
2825 3599 1.886542 GGATTGCCGGATATTTCCCAC 59.113 52.381 5.05 0.00 39.01 4.61
2826 3600 1.496857 TGGATTGCCGGATATTTCCCA 59.503 47.619 5.05 0.00 39.01 4.37
2827 3601 2.286365 TGGATTGCCGGATATTTCCC 57.714 50.000 5.05 0.00 39.01 3.97
2828 3602 3.119849 CGATTGGATTGCCGGATATTTCC 60.120 47.826 5.05 3.85 38.81 3.13
2829 3603 3.119849 CCGATTGGATTGCCGGATATTTC 60.120 47.826 5.05 0.00 44.29 2.17
2830 3604 2.819608 CCGATTGGATTGCCGGATATTT 59.180 45.455 5.05 0.00 44.29 1.40
2831 3605 2.436417 CCGATTGGATTGCCGGATATT 58.564 47.619 5.05 0.00 44.29 1.28
2832 3606 1.340017 CCCGATTGGATTGCCGGATAT 60.340 52.381 5.05 0.00 44.29 1.63
2833 3607 0.036164 CCCGATTGGATTGCCGGATA 59.964 55.000 5.05 0.00 44.29 2.59
2834 3608 1.228245 CCCGATTGGATTGCCGGAT 60.228 57.895 5.05 0.00 44.29 4.18
2835 3609 2.191908 CCCGATTGGATTGCCGGA 59.808 61.111 5.05 0.00 44.29 5.14
2836 3610 2.191908 TCCCGATTGGATTGCCGG 59.808 61.111 0.00 0.00 38.61 6.13
2843 3617 3.393426 ACTACTTAGGTCCCGATTGGA 57.607 47.619 0.00 0.00 42.41 3.53
2844 3618 5.603170 TTTACTACTTAGGTCCCGATTGG 57.397 43.478 0.00 0.00 0.00 3.16
2845 3619 6.018180 GCATTTTACTACTTAGGTCCCGATTG 60.018 42.308 0.00 0.00 0.00 2.67
2846 3620 6.053650 GCATTTTACTACTTAGGTCCCGATT 58.946 40.000 0.00 0.00 0.00 3.34
2847 3621 5.365895 AGCATTTTACTACTTAGGTCCCGAT 59.634 40.000 0.00 0.00 0.00 4.18
2848 3622 4.713321 AGCATTTTACTACTTAGGTCCCGA 59.287 41.667 0.00 0.00 0.00 5.14
2849 3623 4.809426 CAGCATTTTACTACTTAGGTCCCG 59.191 45.833 0.00 0.00 0.00 5.14
2850 3624 5.123936 CCAGCATTTTACTACTTAGGTCCC 58.876 45.833 0.00 0.00 0.00 4.46
2851 3625 5.585047 CACCAGCATTTTACTACTTAGGTCC 59.415 44.000 0.00 0.00 0.00 4.46
2852 3626 6.092259 CACACCAGCATTTTACTACTTAGGTC 59.908 42.308 0.00 0.00 0.00 3.85
2853 3627 5.938125 CACACCAGCATTTTACTACTTAGGT 59.062 40.000 0.00 0.00 0.00 3.08
2854 3628 6.170506 TCACACCAGCATTTTACTACTTAGG 58.829 40.000 0.00 0.00 0.00 2.69
2855 3629 7.201644 CCATCACACCAGCATTTTACTACTTAG 60.202 40.741 0.00 0.00 0.00 2.18
2856 3630 6.597672 CCATCACACCAGCATTTTACTACTTA 59.402 38.462 0.00 0.00 0.00 2.24
2857 3631 5.415701 CCATCACACCAGCATTTTACTACTT 59.584 40.000 0.00 0.00 0.00 2.24
2858 3632 4.943705 CCATCACACCAGCATTTTACTACT 59.056 41.667 0.00 0.00 0.00 2.57
2859 3633 4.096382 CCCATCACACCAGCATTTTACTAC 59.904 45.833 0.00 0.00 0.00 2.73
2860 3634 4.269183 CCCATCACACCAGCATTTTACTA 58.731 43.478 0.00 0.00 0.00 1.82
2861 3635 3.091545 CCCATCACACCAGCATTTTACT 58.908 45.455 0.00 0.00 0.00 2.24
2862 3636 2.417243 GCCCATCACACCAGCATTTTAC 60.417 50.000 0.00 0.00 0.00 2.01
2863 3637 1.824230 GCCCATCACACCAGCATTTTA 59.176 47.619 0.00 0.00 0.00 1.52
2864 3638 0.609662 GCCCATCACACCAGCATTTT 59.390 50.000 0.00 0.00 0.00 1.82
2865 3639 1.259840 GGCCCATCACACCAGCATTT 61.260 55.000 0.00 0.00 0.00 2.32
2901 3675 1.671054 CTCCCAACGCACACGGATT 60.671 57.895 0.00 0.00 46.04 3.01
2902 3676 2.047274 CTCCCAACGCACACGGAT 60.047 61.111 0.00 0.00 46.04 4.18
2907 3681 3.636231 CCTCCCTCCCAACGCACA 61.636 66.667 0.00 0.00 0.00 4.57
2908 3682 3.316573 CTCCTCCCTCCCAACGCAC 62.317 68.421 0.00 0.00 0.00 5.34
2909 3683 2.822643 ATCTCCTCCCTCCCAACGCA 62.823 60.000 0.00 0.00 0.00 5.24
2910 3684 2.034048 GATCTCCTCCCTCCCAACGC 62.034 65.000 0.00 0.00 0.00 4.84
2911 3685 0.687757 TGATCTCCTCCCTCCCAACG 60.688 60.000 0.00 0.00 0.00 4.10
2912 3686 1.696884 GATGATCTCCTCCCTCCCAAC 59.303 57.143 0.00 0.00 0.00 3.77
2974 3748 1.071228 ACTAGGGAAAACGGACACCAC 59.929 52.381 0.00 0.00 0.00 4.16
2982 3756 1.134560 CTCGGGAGACTAGGGAAAACG 59.865 57.143 0.00 0.00 33.60 3.60
3031 3809 9.522804 CCTACTATCAAAAATACTCTCACTCAC 57.477 37.037 0.00 0.00 0.00 3.51
3032 3810 9.256228 ACCTACTATCAAAAATACTCTCACTCA 57.744 33.333 0.00 0.00 0.00 3.41
3065 3843 6.323996 ACCAGCAGCTACTATAACTTATCACA 59.676 38.462 0.00 0.00 0.00 3.58
3109 3887 5.163622 GGACCAACATTGACAGATAACATGG 60.164 44.000 0.00 0.00 0.00 3.66
3110 3888 5.415389 TGGACCAACATTGACAGATAACATG 59.585 40.000 0.00 0.00 0.00 3.21
3117 3895 2.437651 TGTCTGGACCAACATTGACAGA 59.562 45.455 8.94 8.55 33.86 3.41
3190 3968 9.307121 TGCGAACTTATTTTTCTTTTTCATTCA 57.693 25.926 0.00 0.00 0.00 2.57
3240 4018 3.469008 TCTCAAAGAAAGACGGCAAGA 57.531 42.857 0.00 0.00 0.00 3.02
3247 4025 6.410540 AGACATACCCATCTCAAAGAAAGAC 58.589 40.000 0.00 0.00 0.00 3.01
3293 4071 0.245539 GCTCGGCAACTAGTACCACA 59.754 55.000 13.69 0.99 0.00 4.17
3294 4072 0.245539 TGCTCGGCAACTAGTACCAC 59.754 55.000 13.69 4.74 34.76 4.16
3295 4073 0.530744 CTGCTCGGCAACTAGTACCA 59.469 55.000 13.69 2.60 38.41 3.25
3296 4074 0.806492 GCTGCTCGGCAACTAGTACC 60.806 60.000 0.00 0.00 38.41 3.34
3308 4086 1.329906 GAAACATCCATCAGCTGCTCG 59.670 52.381 9.47 0.00 0.00 5.03
3311 4089 1.466856 TGGAAACATCCATCAGCTGC 58.533 50.000 9.47 0.00 34.33 5.25
3312 4090 3.087031 ACTTGGAAACATCCATCAGCTG 58.913 45.455 7.63 7.63 42.32 4.24
3313 4091 3.446442 ACTTGGAAACATCCATCAGCT 57.554 42.857 0.00 0.00 42.32 4.24
3374 4152 3.888934 ACATGCAAAACGAGCTAAACAG 58.111 40.909 0.00 0.00 0.00 3.16
3405 4190 9.376075 TCTCATCTTTCTTTTTCAGCATAGTAG 57.624 33.333 0.00 0.00 0.00 2.57
3406 4191 9.896645 ATCTCATCTTTCTTTTTCAGCATAGTA 57.103 29.630 0.00 0.00 0.00 1.82
3407 4192 8.675504 CATCTCATCTTTCTTTTTCAGCATAGT 58.324 33.333 0.00 0.00 0.00 2.12
3451 4236 4.202503 ACCAATCTCAAAGAGAGCAGGAAA 60.203 41.667 14.89 0.00 42.26 3.13
3470 4255 4.284490 AGATGAGCACAGTAAAGAGACCAA 59.716 41.667 0.00 0.00 0.00 3.67
3479 4264 4.470334 TGCATACAGATGAGCACAGTAA 57.530 40.909 0.00 0.00 34.73 2.24
3514 4299 0.745845 ATGAGCACATCCAAGACGGC 60.746 55.000 0.00 0.00 29.98 5.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.