Multiple sequence alignment - TraesCS3B01G041800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G041800 chr3B 100.000 2810 0 0 1 2810 20798568 20801377 0.000000e+00 5190
1 TraesCS3B01G041800 chr3D 84.881 1303 112 49 598 1860 14154410 14155667 0.000000e+00 1236
2 TraesCS3B01G041800 chr3D 80.537 298 23 19 110 386 14154001 14154284 2.210000e-46 196
3 TraesCS3B01G041800 chr3D 84.874 119 1 8 9 111 14153863 14153980 1.380000e-18 104
4 TraesCS3B01G041800 chr3A 84.235 1313 96 55 683 1941 22563820 22562565 0.000000e+00 1175
5 TraesCS3B01G041800 chr3A 82.326 430 44 13 1945 2366 22562498 22562093 7.450000e-91 344
6 TraesCS3B01G041800 chr3A 75.655 534 41 46 10 469 22564534 22564016 1.720000e-42 183


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G041800 chr3B 20798568 20801377 2809 False 5190.000000 5190 100.000000 1 2810 1 chr3B.!!$F1 2809
1 TraesCS3B01G041800 chr3D 14153863 14155667 1804 False 512.000000 1236 83.430667 9 1860 3 chr3D.!!$F1 1851
2 TraesCS3B01G041800 chr3A 22562093 22564534 2441 True 567.333333 1175 80.738667 10 2366 3 chr3A.!!$R1 2356

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
161 198 0.035534 TACGACTGGTGGTACCGCTA 60.036 55.0 24.21 18.05 42.58 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2141 2425 0.387239 GCATTTGCTGACACGGGAAC 60.387 55.0 0.0 0.0 38.21 3.62 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 3.121030 CAAGTTGAGCGAGCCCCG 61.121 66.667 0.00 0.00 42.21 5.73
52 53 3.626924 AAGTTGAGCGAGCCCCGT 61.627 61.111 0.00 0.00 41.15 5.28
53 54 3.591254 AAGTTGAGCGAGCCCCGTC 62.591 63.158 0.00 0.00 41.15 4.79
112 129 2.203209 CCATGTCGGCCCCTTAGC 60.203 66.667 0.00 0.00 0.00 3.09
148 185 3.381949 GCTTTAATGCCGAGATACGACT 58.618 45.455 1.93 0.00 45.77 4.18
157 194 1.332997 CGAGATACGACTGGTGGTACC 59.667 57.143 4.43 4.43 45.77 3.34
158 195 1.332997 GAGATACGACTGGTGGTACCG 59.667 57.143 7.57 0.00 42.58 4.02
160 197 0.682209 ATACGACTGGTGGTACCGCT 60.682 55.000 24.21 5.35 42.58 5.52
161 198 0.035534 TACGACTGGTGGTACCGCTA 60.036 55.000 24.21 18.05 42.58 4.26
164 201 0.455005 GACTGGTGGTACCGCTACTC 59.545 60.000 24.21 13.15 42.58 2.59
177 216 1.911766 CTACTCCACCACCACCGGT 60.912 63.158 0.00 0.00 41.07 5.28
203 247 3.980238 ACACGTAGTACGAACGAGTAG 57.020 47.619 28.47 15.08 46.05 2.57
205 249 4.482386 ACACGTAGTACGAACGAGTAGTA 58.518 43.478 28.47 0.00 46.05 1.82
209 253 7.113684 ACACGTAGTACGAACGAGTAGTATATC 59.886 40.741 28.47 0.00 46.05 1.63
228 272 9.018716 AGTATATCATCGAGTTAGATACGTACG 57.981 37.037 15.01 15.01 0.00 3.67
229 273 7.824704 ATATCATCGAGTTAGATACGTACGT 57.175 36.000 25.98 25.98 0.00 3.57
230 274 5.320607 TCATCGAGTTAGATACGTACGTG 57.679 43.478 30.25 10.54 0.00 4.49
244 288 8.615211 AGATACGTACGTGTTAATTATGAGACA 58.385 33.333 30.25 4.97 0.00 3.41
245 289 9.390795 GATACGTACGTGTTAATTATGAGACAT 57.609 33.333 30.25 9.87 0.00 3.06
249 293 7.219344 CGTACGTGTTAATTATGAGACATGACA 59.781 37.037 7.22 0.00 34.13 3.58
250 294 7.290857 ACGTGTTAATTATGAGACATGACAC 57.709 36.000 12.18 7.43 34.13 3.67
267 323 1.338389 ACACGATAGAAAACCGGTGGG 60.338 52.381 8.52 0.00 41.38 4.61
301 360 3.209410 GCAGGTTCTAGTAGCATGCATT 58.791 45.455 21.98 7.16 32.58 3.56
302 361 3.629398 GCAGGTTCTAGTAGCATGCATTT 59.371 43.478 21.98 6.77 32.58 2.32
304 363 5.277538 GCAGGTTCTAGTAGCATGCATTTAC 60.278 44.000 21.98 13.70 32.58 2.01
305 364 5.817296 CAGGTTCTAGTAGCATGCATTTACA 59.183 40.000 21.98 4.39 0.00 2.41
306 365 6.484643 CAGGTTCTAGTAGCATGCATTTACAT 59.515 38.462 21.98 0.00 0.00 2.29
329 405 8.768955 ACATGAACGAATCTCTTAATTATGCTC 58.231 33.333 0.00 0.00 0.00 4.26
388 470 4.070552 GCGCTCACCTTCCCGAGT 62.071 66.667 0.00 0.00 0.00 4.18
400 487 4.692475 CCGAGTCCCCGGCGTTTT 62.692 66.667 6.01 0.00 43.25 2.43
473 571 3.419759 CAACACGGGCACGGCTAC 61.420 66.667 15.46 0.00 46.48 3.58
495 593 3.209812 CCGACGCGATCTCCCTCA 61.210 66.667 15.93 0.00 0.00 3.86
497 595 2.725008 GACGCGATCTCCCTCAGG 59.275 66.667 15.93 0.00 0.00 3.86
498 596 3.492311 GACGCGATCTCCCTCAGGC 62.492 68.421 15.93 0.00 0.00 4.85
500 598 2.841988 GCGATCTCCCTCAGGCCT 60.842 66.667 0.00 0.00 0.00 5.19
501 599 2.866726 GCGATCTCCCTCAGGCCTC 61.867 68.421 0.00 0.00 0.00 4.70
502 600 1.456518 CGATCTCCCTCAGGCCTCA 60.457 63.158 0.00 0.00 0.00 3.86
503 601 1.462731 CGATCTCCCTCAGGCCTCAG 61.463 65.000 0.00 0.00 0.00 3.35
504 602 1.757423 GATCTCCCTCAGGCCTCAGC 61.757 65.000 0.00 0.00 38.76 4.26
514 612 2.360475 GCCTCAGCCCAACCACTC 60.360 66.667 0.00 0.00 0.00 3.51
515 613 2.046892 CCTCAGCCCAACCACTCG 60.047 66.667 0.00 0.00 0.00 4.18
516 614 2.743718 CTCAGCCCAACCACTCGT 59.256 61.111 0.00 0.00 0.00 4.18
517 615 1.669115 CTCAGCCCAACCACTCGTG 60.669 63.158 0.00 0.00 0.00 4.35
518 616 2.111043 CAGCCCAACCACTCGTGT 59.889 61.111 0.00 0.00 0.00 4.49
519 617 2.111043 AGCCCAACCACTCGTGTG 59.889 61.111 10.61 10.61 43.45 3.82
520 618 2.203153 GCCCAACCACTCGTGTGT 60.203 61.111 15.79 2.43 42.34 3.72
521 619 2.542907 GCCCAACCACTCGTGTGTG 61.543 63.158 15.79 8.69 42.34 3.82
530 628 1.532437 CACTCGTGTGTGGAGTACGTA 59.468 52.381 9.42 0.00 42.63 3.57
536 634 3.848019 CGTGTGTGGAGTACGTACAATAC 59.152 47.826 26.55 19.97 33.48 1.89
537 635 4.613394 CGTGTGTGGAGTACGTACAATACA 60.613 45.833 26.55 21.98 33.48 2.29
538 636 5.221880 GTGTGTGGAGTACGTACAATACAA 58.778 41.667 26.55 14.26 0.00 2.41
539 637 5.865552 GTGTGTGGAGTACGTACAATACAAT 59.134 40.000 26.55 4.76 0.00 2.71
541 639 6.094719 GTGTGGAGTACGTACAATACAATGA 58.905 40.000 26.55 4.64 0.00 2.57
542 640 6.755141 GTGTGGAGTACGTACAATACAATGAT 59.245 38.462 26.55 2.47 0.00 2.45
544 642 6.141844 GTGGAGTACGTACAATACAATGATCG 59.858 42.308 26.55 0.00 0.00 3.69
545 643 6.183360 TGGAGTACGTACAATACAATGATCGT 60.183 38.462 26.55 1.26 37.16 3.73
546 644 7.012232 TGGAGTACGTACAATACAATGATCGTA 59.988 37.037 26.55 2.93 35.90 3.43
549 647 6.801367 ACGTACAATACAATGATCGTACAC 57.199 37.500 0.00 0.00 34.06 2.90
550 648 5.453266 ACGTACAATACAATGATCGTACACG 59.547 40.000 0.00 0.00 41.45 4.49
551 649 5.453266 CGTACAATACAATGATCGTACACGT 59.547 40.000 1.19 0.00 40.80 4.49
552 650 6.628461 CGTACAATACAATGATCGTACACGTA 59.372 38.462 1.19 0.00 40.80 3.57
553 651 7.321984 CGTACAATACAATGATCGTACACGTAT 59.678 37.037 1.19 0.00 40.80 3.06
554 652 9.597999 GTACAATACAATGATCGTACACGTATA 57.402 33.333 1.19 0.00 40.80 1.47
555 653 8.498192 ACAATACAATGATCGTACACGTATAC 57.502 34.615 1.19 0.00 40.80 1.47
556 654 8.347771 ACAATACAATGATCGTACACGTATACT 58.652 33.333 2.04 0.00 40.80 2.12
557 655 8.627428 CAATACAATGATCGTACACGTATACTG 58.373 37.037 2.04 1.45 40.80 2.74
565 663 3.784468 CGTACACGTATACTGACAAGCAG 59.216 47.826 2.04 0.00 41.53 4.24
575 673 2.260844 TGACAAGCAGAAGGGTGAAG 57.739 50.000 0.00 0.00 0.00 3.02
578 676 2.952310 GACAAGCAGAAGGGTGAAGTTT 59.048 45.455 0.00 0.00 0.00 2.66
579 677 2.952310 ACAAGCAGAAGGGTGAAGTTTC 59.048 45.455 0.00 0.00 0.00 2.78
580 678 3.217626 CAAGCAGAAGGGTGAAGTTTCT 58.782 45.455 0.00 0.00 0.00 2.52
581 679 3.584733 AGCAGAAGGGTGAAGTTTCTT 57.415 42.857 0.00 0.00 0.00 2.52
582 680 3.217626 AGCAGAAGGGTGAAGTTTCTTG 58.782 45.455 0.00 0.00 0.00 3.02
585 683 2.158460 AGAAGGGTGAAGTTTCTTGGGG 60.158 50.000 0.00 0.00 0.00 4.96
586 684 0.482887 AGGGTGAAGTTTCTTGGGGG 59.517 55.000 0.00 0.00 0.00 5.40
587 685 0.481128 GGGTGAAGTTTCTTGGGGGA 59.519 55.000 0.00 0.00 0.00 4.81
588 686 1.133294 GGGTGAAGTTTCTTGGGGGAA 60.133 52.381 0.00 0.00 0.00 3.97
589 687 2.673258 GGTGAAGTTTCTTGGGGGAAA 58.327 47.619 0.00 0.00 33.47 3.13
590 688 3.035363 GGTGAAGTTTCTTGGGGGAAAA 58.965 45.455 0.00 0.00 37.02 2.29
591 689 3.181469 GGTGAAGTTTCTTGGGGGAAAAC 60.181 47.826 0.00 0.00 37.02 2.43
592 690 2.691011 TGAAGTTTCTTGGGGGAAAACG 59.309 45.455 0.00 0.00 37.02 3.60
593 691 2.447408 AGTTTCTTGGGGGAAAACGT 57.553 45.000 0.00 0.00 37.02 3.99
594 692 3.581265 AGTTTCTTGGGGGAAAACGTA 57.419 42.857 0.00 0.00 37.02 3.57
595 693 3.483421 AGTTTCTTGGGGGAAAACGTAG 58.517 45.455 0.00 0.00 37.02 3.51
647 745 4.873129 CGCCATGTCGACCGGGAG 62.873 72.222 22.57 16.80 0.00 4.30
673 800 3.712881 GAACAGCGACGTGGCCAC 61.713 66.667 26.78 26.78 0.00 5.01
702 831 1.864725 TTGCATGCACATCCACACGG 61.865 55.000 22.58 0.00 0.00 4.94
785 918 3.818787 GGAAGGCGGCTGCATGTG 61.819 66.667 20.17 0.00 45.35 3.21
786 919 3.058160 GAAGGCGGCTGCATGTGT 61.058 61.111 21.31 0.00 45.35 3.72
791 924 4.156622 CGGCTGCATGTGTCGCTG 62.157 66.667 0.50 0.00 0.00 5.18
851 1001 1.890510 GCTGAACGGAACCGGTGTT 60.891 57.895 8.52 8.46 40.58 3.32
862 1012 0.889186 ACCGGTGTTGATCAAGTGGC 60.889 55.000 6.12 0.00 0.00 5.01
863 1013 0.606401 CCGGTGTTGATCAAGTGGCT 60.606 55.000 8.80 0.00 0.00 4.75
864 1014 0.518636 CGGTGTTGATCAAGTGGCTG 59.481 55.000 8.80 1.02 0.00 4.85
865 1015 0.883833 GGTGTTGATCAAGTGGCTGG 59.116 55.000 8.80 0.00 0.00 4.85
948 1098 4.729856 GCCGCAAAGCCCAAGCAG 62.730 66.667 0.00 0.00 43.56 4.24
959 1109 1.224075 CCCAAGCAGCATCGTATCAG 58.776 55.000 0.00 0.00 0.00 2.90
962 1112 0.533755 AAGCAGCATCGTATCAGCCC 60.534 55.000 0.00 0.00 0.00 5.19
963 1113 1.963338 GCAGCATCGTATCAGCCCC 60.963 63.158 0.00 0.00 0.00 5.80
964 1114 1.447217 CAGCATCGTATCAGCCCCA 59.553 57.895 0.00 0.00 0.00 4.96
965 1115 0.602106 CAGCATCGTATCAGCCCCAG 60.602 60.000 0.00 0.00 0.00 4.45
1007 1158 2.101965 CAGCGCTCTCACTCTCCG 59.898 66.667 7.13 0.00 0.00 4.63
1018 1169 3.816524 CTCTCCGCTCGCCGTCTT 61.817 66.667 0.00 0.00 34.38 3.01
1022 1173 4.856607 CCGCTCGCCGTCTTCCTC 62.857 72.222 0.00 0.00 34.38 3.71
1023 1174 4.856607 CGCTCGCCGTCTTCCTCC 62.857 72.222 0.00 0.00 0.00 4.30
1053 1204 2.047844 TCGCAAGAGGCAGAGCAC 60.048 61.111 0.00 0.00 45.01 4.40
1055 1206 2.047844 GCAAGAGGCAGAGCACGA 60.048 61.111 0.00 0.00 43.97 4.35
1103 1260 4.938756 ACCCCAAGGCCCAGGACA 62.939 66.667 12.54 0.00 36.11 4.02
1284 1444 2.509336 CGCTTCTTCCATCGCCGT 60.509 61.111 0.00 0.00 0.00 5.68
1288 1448 0.876342 CTTCTTCCATCGCCGTAGCC 60.876 60.000 0.00 0.00 34.57 3.93
1588 1768 1.291877 CCAAGTGAAGAAGCGACGGG 61.292 60.000 0.00 0.00 0.00 5.28
1638 1825 1.671379 GACGCCTTCCACCACTTCC 60.671 63.158 0.00 0.00 0.00 3.46
1639 1826 2.742372 CGCCTTCCACCACTTCCG 60.742 66.667 0.00 0.00 0.00 4.30
1640 1827 2.747686 GCCTTCCACCACTTCCGA 59.252 61.111 0.00 0.00 0.00 4.55
1641 1828 1.376037 GCCTTCCACCACTTCCGAG 60.376 63.158 0.00 0.00 0.00 4.63
1642 1829 1.827399 GCCTTCCACCACTTCCGAGA 61.827 60.000 0.00 0.00 0.00 4.04
1660 1847 4.022676 CCGAGAAGAAACTAGATAGGAGCC 60.023 50.000 0.00 0.00 0.00 4.70
1726 1943 3.896272 ACTAATCGAGGAGGTTACCATCC 59.104 47.826 3.51 7.91 35.71 3.51
1740 1957 6.442564 AGGTTACCATCCACTACTAATGTCAA 59.557 38.462 3.51 0.00 0.00 3.18
1819 2038 3.094661 TTGCGACGGCGATGCAATC 62.095 57.895 29.00 10.47 43.13 2.67
1822 2041 1.589993 CGACGGCGATGCAATCTCT 60.590 57.895 16.62 0.00 42.58 3.10
1826 2045 1.148157 CGGCGATGCAATCTCTCGTT 61.148 55.000 0.00 0.00 42.58 3.85
1827 2046 0.302890 GGCGATGCAATCTCTCGTTG 59.697 55.000 8.31 0.00 42.58 4.10
1841 2062 2.644992 GTTGCCTTCTTGTGCCCG 59.355 61.111 0.00 0.00 0.00 6.13
1854 2075 4.193334 GCCCGGCGCCTTGATTTC 62.193 66.667 26.68 2.34 0.00 2.17
1879 2100 0.436913 CGTGTTGTTGCGCGATTAGA 59.563 50.000 12.10 0.00 44.10 2.10
1880 2101 1.782023 CGTGTTGTTGCGCGATTAGAC 60.782 52.381 12.10 2.48 44.10 2.59
1881 2102 1.193650 GTGTTGTTGCGCGATTAGACA 59.806 47.619 12.10 5.54 0.00 3.41
1892 2113 3.804325 CGCGATTAGACACCATTCTCATT 59.196 43.478 0.00 0.00 0.00 2.57
1901 2122 3.569701 ACACCATTCTCATTTGCGTTCTT 59.430 39.130 0.00 0.00 0.00 2.52
1905 2126 0.796312 TCTCATTTGCGTTCTTCGGC 59.204 50.000 0.00 0.00 40.26 5.54
1908 2129 1.539388 TCATTTGCGTTCTTCGGCAAT 59.461 42.857 0.00 0.00 40.26 3.56
1910 2131 0.662970 TTTGCGTTCTTCGGCAATGC 60.663 50.000 0.00 0.00 40.26 3.56
1931 2152 2.355363 TCGTCGCCGGAGTTGTTG 60.355 61.111 5.05 0.00 33.95 3.33
1932 2153 4.072088 CGTCGCCGGAGTTGTTGC 62.072 66.667 5.05 0.00 0.00 4.17
1936 2157 3.365265 GCCGGAGTTGTTGCTGGG 61.365 66.667 5.05 0.00 0.00 4.45
1941 2162 2.432444 CGGAGTTGTTGCTGGGATTAA 58.568 47.619 0.00 0.00 0.00 1.40
1942 2163 2.161609 CGGAGTTGTTGCTGGGATTAAC 59.838 50.000 0.00 0.00 0.00 2.01
1943 2164 3.421844 GGAGTTGTTGCTGGGATTAACT 58.578 45.455 0.00 0.00 0.00 2.24
1961 2245 0.457035 CTGTGCAGTGCAGTTGGTTT 59.543 50.000 20.42 0.00 40.08 3.27
1963 2247 0.592247 GTGCAGTGCAGTTGGTTTCG 60.592 55.000 20.42 0.00 40.08 3.46
1997 2281 2.202987 GGACGATGAGCCTGCCTG 60.203 66.667 0.00 0.00 0.00 4.85
2012 2296 3.052082 CTGTGCCTGTTGCCTCCG 61.052 66.667 0.00 0.00 40.16 4.63
2016 2300 2.747855 GCCTGTTGCCTCCGGAAG 60.748 66.667 5.23 0.00 0.00 3.46
2033 2317 0.614697 AAGGAGGCCGAAATTTGGGG 60.615 55.000 19.48 10.37 0.00 4.96
2034 2318 1.304962 GGAGGCCGAAATTTGGGGT 60.305 57.895 19.48 0.00 0.00 4.95
2035 2319 0.902984 GGAGGCCGAAATTTGGGGTT 60.903 55.000 19.48 3.29 0.00 4.11
2036 2320 0.246360 GAGGCCGAAATTTGGGGTTG 59.754 55.000 19.48 0.00 0.00 3.77
2037 2321 1.191489 AGGCCGAAATTTGGGGTTGG 61.191 55.000 19.48 0.00 0.00 3.77
2038 2322 1.295101 GCCGAAATTTGGGGTTGGG 59.705 57.895 19.48 0.00 0.00 4.12
2039 2323 1.295101 CCGAAATTTGGGGTTGGGC 59.705 57.895 11.21 0.00 0.00 5.36
2040 2324 1.080161 CGAAATTTGGGGTTGGGCG 60.080 57.895 0.00 0.00 0.00 6.13
2041 2325 1.295101 GAAATTTGGGGTTGGGCGG 59.705 57.895 0.00 0.00 0.00 6.13
2042 2326 2.796483 GAAATTTGGGGTTGGGCGGC 62.796 60.000 0.00 0.00 0.00 6.53
2079 2363 4.700365 GCGGGCGAACCAAGCAAC 62.700 66.667 0.00 0.00 39.90 4.17
2139 2423 2.047844 CTGGAGGTGGAGTGCGTG 60.048 66.667 0.00 0.00 0.00 5.34
2142 2426 4.664677 GAGGTGGAGTGCGTGCGT 62.665 66.667 0.00 0.00 0.00 5.24
2143 2427 4.235762 AGGTGGAGTGCGTGCGTT 62.236 61.111 0.00 0.00 0.00 4.84
2144 2428 3.712881 GGTGGAGTGCGTGCGTTC 61.713 66.667 0.00 0.00 0.00 3.95
2145 2429 3.712881 GTGGAGTGCGTGCGTTCC 61.713 66.667 7.31 7.31 0.00 3.62
2146 2430 4.980805 TGGAGTGCGTGCGTTCCC 62.981 66.667 10.68 0.19 0.00 3.97
2168 2452 2.490903 GTGTCAGCAAATGCCAGAATCT 59.509 45.455 0.94 0.00 43.38 2.40
2190 2474 4.285292 TCGTCGTTTCTGTAACTCTGTTC 58.715 43.478 0.00 0.00 34.46 3.18
2224 2509 0.387239 GCGTTCCCATGTCAGCAAAC 60.387 55.000 0.00 0.00 0.00 2.93
2239 2526 0.789383 CAAACGGCTGAATCGCGTTC 60.789 55.000 5.77 10.15 37.35 3.95
2241 2528 3.564027 CGGCTGAATCGCGTTCCC 61.564 66.667 5.77 6.36 35.91 3.97
2243 2530 1.745489 GGCTGAATCGCGTTCCCTT 60.745 57.895 5.77 0.00 35.91 3.95
2247 2534 1.394917 CTGAATCGCGTTCCCTTTCTG 59.605 52.381 5.77 2.26 35.91 3.02
2248 2535 1.270625 TGAATCGCGTTCCCTTTCTGT 60.271 47.619 5.77 0.00 35.91 3.41
2258 2545 1.487142 TCCCTTTCTGTGTTTCCGTGA 59.513 47.619 0.00 0.00 0.00 4.35
2260 2547 2.032924 CCCTTTCTGTGTTTCCGTGAAC 59.967 50.000 0.00 0.00 0.00 3.18
2263 2550 1.658994 TCTGTGTTTCCGTGAACCAC 58.341 50.000 7.16 7.16 0.00 4.16
2276 2564 1.144969 GAACCACGATTGCACTTCGA 58.855 50.000 21.40 0.00 39.81 3.71
2280 2568 1.595609 CACGATTGCACTTCGAAAGC 58.404 50.000 21.40 13.63 39.81 3.51
2283 2571 1.783416 CGATTGCACTTCGAAAGCGTC 60.783 52.381 11.80 13.92 38.88 5.19
2287 2575 0.111089 GCACTTCGAAAGCGTCTGTG 60.111 55.000 0.00 3.17 38.98 3.66
2291 2579 0.790207 TTCGAAAGCGTCTGTGATGC 59.210 50.000 0.00 3.80 44.07 3.91
2305 2593 1.069022 GTGATGCACGTTCAGTTGCAT 60.069 47.619 8.74 8.74 44.32 3.96
2306 2594 1.608109 TGATGCACGTTCAGTTGCATT 59.392 42.857 10.21 0.00 42.90 3.56
2307 2595 2.245096 GATGCACGTTCAGTTGCATTC 58.755 47.619 10.21 1.51 42.90 2.67
2308 2596 0.041400 TGCACGTTCAGTTGCATTCG 60.041 50.000 0.00 0.00 33.95 3.34
2309 2597 0.041312 GCACGTTCAGTTGCATTCGT 60.041 50.000 0.00 0.00 0.00 3.85
2352 2643 2.307098 AGAATGCTACTGTCAAGGCCTT 59.693 45.455 13.78 13.78 0.00 4.35
2353 2644 2.409948 ATGCTACTGTCAAGGCCTTC 57.590 50.000 17.29 6.07 0.00 3.46
2355 2646 1.699634 TGCTACTGTCAAGGCCTTCTT 59.300 47.619 17.29 0.28 35.79 2.52
2362 2653 2.430332 TGTCAAGGCCTTCTTTGGTTTG 59.570 45.455 17.29 1.24 32.41 2.93
2363 2654 2.430694 GTCAAGGCCTTCTTTGGTTTGT 59.569 45.455 17.29 0.00 32.41 2.83
2364 2655 3.634910 GTCAAGGCCTTCTTTGGTTTGTA 59.365 43.478 17.29 0.00 32.41 2.41
2365 2656 3.634910 TCAAGGCCTTCTTTGGTTTGTAC 59.365 43.478 17.29 0.00 32.41 2.90
2366 2657 3.595190 AGGCCTTCTTTGGTTTGTACT 57.405 42.857 0.00 0.00 0.00 2.73
2367 2658 4.717279 AGGCCTTCTTTGGTTTGTACTA 57.283 40.909 0.00 0.00 0.00 1.82
2368 2659 4.652822 AGGCCTTCTTTGGTTTGTACTAG 58.347 43.478 0.00 0.00 0.00 2.57
2369 2660 3.756963 GGCCTTCTTTGGTTTGTACTAGG 59.243 47.826 0.00 0.00 0.00 3.02
2370 2661 4.506095 GGCCTTCTTTGGTTTGTACTAGGA 60.506 45.833 0.00 0.00 0.00 2.94
2371 2662 5.254115 GCCTTCTTTGGTTTGTACTAGGAT 58.746 41.667 0.00 0.00 0.00 3.24
2372 2663 6.412214 GCCTTCTTTGGTTTGTACTAGGATA 58.588 40.000 0.00 0.00 0.00 2.59
2373 2664 7.054751 GCCTTCTTTGGTTTGTACTAGGATAT 58.945 38.462 0.00 0.00 0.00 1.63
2374 2665 8.208903 GCCTTCTTTGGTTTGTACTAGGATATA 58.791 37.037 0.00 0.00 0.00 0.86
2423 2714 9.120658 AGATTATGAATGGATCCTTATCTTCCA 57.879 33.333 14.23 0.00 43.37 3.53
2424 2715 9.171877 GATTATGAATGGATCCTTATCTTCCAC 57.828 37.037 14.23 0.00 42.09 4.02
2425 2716 4.960938 TGAATGGATCCTTATCTTCCACG 58.039 43.478 14.23 0.00 42.09 4.94
2426 2717 4.408921 TGAATGGATCCTTATCTTCCACGT 59.591 41.667 14.23 0.00 42.09 4.49
2427 2718 5.104527 TGAATGGATCCTTATCTTCCACGTT 60.105 40.000 14.23 0.00 42.09 3.99
2428 2719 4.837093 TGGATCCTTATCTTCCACGTTT 57.163 40.909 14.23 0.00 34.65 3.60
2429 2720 4.766375 TGGATCCTTATCTTCCACGTTTC 58.234 43.478 14.23 0.00 34.65 2.78
2430 2721 4.224147 TGGATCCTTATCTTCCACGTTTCA 59.776 41.667 14.23 0.00 34.65 2.69
2431 2722 5.183228 GGATCCTTATCTTCCACGTTTCAA 58.817 41.667 3.84 0.00 32.29 2.69
2432 2723 5.646360 GGATCCTTATCTTCCACGTTTCAAA 59.354 40.000 3.84 0.00 32.29 2.69
2433 2724 6.183360 GGATCCTTATCTTCCACGTTTCAAAG 60.183 42.308 3.84 0.00 32.29 2.77
2434 2725 5.860611 TCCTTATCTTCCACGTTTCAAAGA 58.139 37.500 0.00 0.00 32.69 2.52
2435 2726 6.292923 TCCTTATCTTCCACGTTTCAAAGAA 58.707 36.000 0.00 0.00 31.98 2.52
2436 2727 6.204108 TCCTTATCTTCCACGTTTCAAAGAAC 59.796 38.462 0.00 0.00 31.98 3.01
2437 2728 6.017440 CCTTATCTTCCACGTTTCAAAGAACA 60.017 38.462 0.00 0.00 31.98 3.18
2438 2729 5.828299 ATCTTCCACGTTTCAAAGAACAA 57.172 34.783 0.00 0.00 31.98 2.83
2439 2730 5.630661 TCTTCCACGTTTCAAAGAACAAA 57.369 34.783 0.00 0.00 0.00 2.83
2440 2731 6.015027 TCTTCCACGTTTCAAAGAACAAAA 57.985 33.333 0.00 0.00 0.00 2.44
2441 2732 5.859648 TCTTCCACGTTTCAAAGAACAAAAC 59.140 36.000 0.00 0.00 0.00 2.43
2442 2733 5.122512 TCCACGTTTCAAAGAACAAAACA 57.877 34.783 0.00 0.00 33.51 2.83
2443 2734 5.715070 TCCACGTTTCAAAGAACAAAACAT 58.285 33.333 0.00 0.00 33.51 2.71
2444 2735 6.159988 TCCACGTTTCAAAGAACAAAACATT 58.840 32.000 0.00 0.00 33.51 2.71
2445 2736 6.090088 TCCACGTTTCAAAGAACAAAACATTG 59.910 34.615 0.00 0.00 33.51 2.82
2446 2737 6.239945 CACGTTTCAAAGAACAAAACATTGG 58.760 36.000 0.00 0.00 33.51 3.16
2447 2738 5.163903 ACGTTTCAAAGAACAAAACATTGGC 60.164 36.000 0.00 0.00 33.51 4.52
2448 2739 5.163913 CGTTTCAAAGAACAAAACATTGGCA 60.164 36.000 0.00 0.00 33.51 4.92
2449 2740 5.793026 TTCAAAGAACAAAACATTGGCAC 57.207 34.783 0.00 0.00 0.00 5.01
2450 2741 3.862267 TCAAAGAACAAAACATTGGCACG 59.138 39.130 0.00 0.00 0.00 5.34
2451 2742 2.507339 AGAACAAAACATTGGCACGG 57.493 45.000 0.00 0.00 0.00 4.94
2452 2743 2.028130 AGAACAAAACATTGGCACGGA 58.972 42.857 0.00 0.00 0.00 4.69
2453 2744 2.124122 GAACAAAACATTGGCACGGAC 58.876 47.619 0.00 0.00 0.00 4.79
2454 2745 0.387565 ACAAAACATTGGCACGGACC 59.612 50.000 0.00 0.00 0.00 4.46
2455 2746 0.673437 CAAAACATTGGCACGGACCT 59.327 50.000 0.00 0.00 0.00 3.85
2456 2747 1.883275 CAAAACATTGGCACGGACCTA 59.117 47.619 0.00 0.00 0.00 3.08
2457 2748 2.279935 AAACATTGGCACGGACCTAA 57.720 45.000 0.00 0.00 0.00 2.69
2458 2749 2.507407 AACATTGGCACGGACCTAAT 57.493 45.000 0.00 0.00 0.00 1.73
2459 2750 1.750193 ACATTGGCACGGACCTAATG 58.250 50.000 14.02 14.02 35.80 1.90
2460 2751 1.280710 ACATTGGCACGGACCTAATGA 59.719 47.619 18.67 0.00 34.76 2.57
2461 2752 2.290641 ACATTGGCACGGACCTAATGAA 60.291 45.455 18.67 0.46 34.76 2.57
2462 2753 2.570415 TTGGCACGGACCTAATGAAA 57.430 45.000 0.00 0.00 0.00 2.69
2463 2754 2.570415 TGGCACGGACCTAATGAAAA 57.430 45.000 0.00 0.00 0.00 2.29
2464 2755 3.080300 TGGCACGGACCTAATGAAAAT 57.920 42.857 0.00 0.00 0.00 1.82
2465 2756 3.426615 TGGCACGGACCTAATGAAAATT 58.573 40.909 0.00 0.00 0.00 1.82
2466 2757 3.442273 TGGCACGGACCTAATGAAAATTC 59.558 43.478 0.00 0.00 0.00 2.17
2467 2758 3.694566 GGCACGGACCTAATGAAAATTCT 59.305 43.478 0.00 0.00 0.00 2.40
2468 2759 4.201920 GGCACGGACCTAATGAAAATTCTC 60.202 45.833 0.00 0.00 0.00 2.87
2469 2760 4.636206 GCACGGACCTAATGAAAATTCTCT 59.364 41.667 0.00 0.00 0.00 3.10
2470 2761 5.815740 GCACGGACCTAATGAAAATTCTCTA 59.184 40.000 0.00 0.00 0.00 2.43
2471 2762 6.483640 GCACGGACCTAATGAAAATTCTCTAT 59.516 38.462 0.00 0.00 0.00 1.98
2472 2763 7.307455 GCACGGACCTAATGAAAATTCTCTATC 60.307 40.741 0.00 0.00 0.00 2.08
2473 2764 7.171678 CACGGACCTAATGAAAATTCTCTATCC 59.828 40.741 0.00 0.00 0.00 2.59
2474 2765 7.071321 ACGGACCTAATGAAAATTCTCTATCCT 59.929 37.037 0.00 0.00 0.00 3.24
2475 2766 8.585881 CGGACCTAATGAAAATTCTCTATCCTA 58.414 37.037 0.00 0.00 0.00 2.94
2503 2794 8.779354 AAGTATAAACCAAGTGACATCTCTTC 57.221 34.615 0.00 0.00 0.00 2.87
2504 2795 7.036220 AGTATAAACCAAGTGACATCTCTTCG 58.964 38.462 0.00 0.00 0.00 3.79
2505 2796 2.086054 ACCAAGTGACATCTCTTCGC 57.914 50.000 0.00 0.00 0.00 4.70
2506 2797 1.620819 ACCAAGTGACATCTCTTCGCT 59.379 47.619 0.00 0.00 35.28 4.93
2507 2798 2.826128 ACCAAGTGACATCTCTTCGCTA 59.174 45.455 0.00 0.00 32.55 4.26
2508 2799 3.182967 CCAAGTGACATCTCTTCGCTAC 58.817 50.000 0.00 0.00 32.55 3.58
2509 2800 3.367395 CCAAGTGACATCTCTTCGCTACA 60.367 47.826 0.00 0.00 32.55 2.74
2510 2801 4.237724 CAAGTGACATCTCTTCGCTACAA 58.762 43.478 0.00 0.00 32.55 2.41
2511 2802 4.103365 AGTGACATCTCTTCGCTACAAG 57.897 45.455 0.00 0.00 31.94 3.16
2512 2803 3.119316 AGTGACATCTCTTCGCTACAAGG 60.119 47.826 0.00 0.00 31.94 3.61
2513 2804 2.197577 GACATCTCTTCGCTACAAGGC 58.802 52.381 0.00 0.00 0.00 4.35
2514 2805 1.827969 ACATCTCTTCGCTACAAGGCT 59.172 47.619 0.00 0.00 0.00 4.58
2515 2806 2.200067 CATCTCTTCGCTACAAGGCTG 58.800 52.381 0.00 0.00 0.00 4.85
2516 2807 1.545841 TCTCTTCGCTACAAGGCTGA 58.454 50.000 0.00 0.00 0.00 4.26
2517 2808 1.474478 TCTCTTCGCTACAAGGCTGAG 59.526 52.381 0.00 0.00 0.00 3.35
2518 2809 1.474478 CTCTTCGCTACAAGGCTGAGA 59.526 52.381 0.00 0.00 0.00 3.27
2519 2810 2.100584 CTCTTCGCTACAAGGCTGAGAT 59.899 50.000 0.00 0.00 0.00 2.75
2520 2811 3.288092 TCTTCGCTACAAGGCTGAGATA 58.712 45.455 0.00 0.00 0.00 1.98
2521 2812 3.066900 TCTTCGCTACAAGGCTGAGATAC 59.933 47.826 0.00 0.00 0.00 2.24
2522 2813 2.375146 TCGCTACAAGGCTGAGATACA 58.625 47.619 0.00 0.00 0.00 2.29
2523 2814 2.959030 TCGCTACAAGGCTGAGATACAT 59.041 45.455 0.00 0.00 0.00 2.29
2524 2815 3.055591 CGCTACAAGGCTGAGATACATG 58.944 50.000 0.00 0.00 0.00 3.21
2525 2816 3.491619 CGCTACAAGGCTGAGATACATGT 60.492 47.826 2.69 2.69 0.00 3.21
2526 2817 4.054671 GCTACAAGGCTGAGATACATGTC 58.945 47.826 0.00 0.00 0.00 3.06
2527 2818 4.442052 GCTACAAGGCTGAGATACATGTCA 60.442 45.833 0.00 0.00 0.00 3.58
2528 2819 4.558226 ACAAGGCTGAGATACATGTCAA 57.442 40.909 0.00 0.00 29.08 3.18
2529 2820 5.108187 ACAAGGCTGAGATACATGTCAAT 57.892 39.130 0.00 0.00 29.08 2.57
2530 2821 5.503927 ACAAGGCTGAGATACATGTCAATT 58.496 37.500 0.00 0.00 29.08 2.32
2531 2822 5.587844 ACAAGGCTGAGATACATGTCAATTC 59.412 40.000 0.00 0.00 29.08 2.17
2532 2823 5.363562 AGGCTGAGATACATGTCAATTCA 57.636 39.130 0.00 1.89 29.08 2.57
2533 2824 5.938279 AGGCTGAGATACATGTCAATTCAT 58.062 37.500 0.00 0.00 29.08 2.57
2534 2825 6.363065 AGGCTGAGATACATGTCAATTCATT 58.637 36.000 0.00 0.00 29.08 2.57
2535 2826 6.832384 AGGCTGAGATACATGTCAATTCATTT 59.168 34.615 0.00 0.00 29.08 2.32
2536 2827 7.341256 AGGCTGAGATACATGTCAATTCATTTT 59.659 33.333 0.00 0.00 29.08 1.82
2537 2828 7.646922 GGCTGAGATACATGTCAATTCATTTTC 59.353 37.037 0.00 0.00 29.08 2.29
2538 2829 7.646922 GCTGAGATACATGTCAATTCATTTTCC 59.353 37.037 0.00 0.00 29.08 3.13
2539 2830 8.812513 TGAGATACATGTCAATTCATTTTCCT 57.187 30.769 0.00 0.00 0.00 3.36
2540 2831 9.246670 TGAGATACATGTCAATTCATTTTCCTT 57.753 29.630 0.00 0.00 0.00 3.36
2545 2836 8.186709 ACATGTCAATTCATTTTCCTTTCTCT 57.813 30.769 0.00 0.00 0.00 3.10
2546 2837 8.086522 ACATGTCAATTCATTTTCCTTTCTCTG 58.913 33.333 0.00 0.00 0.00 3.35
2547 2838 6.985117 TGTCAATTCATTTTCCTTTCTCTGG 58.015 36.000 0.00 0.00 0.00 3.86
2548 2839 5.866092 GTCAATTCATTTTCCTTTCTCTGGC 59.134 40.000 0.00 0.00 0.00 4.85
2549 2840 5.539574 TCAATTCATTTTCCTTTCTCTGGCA 59.460 36.000 0.00 0.00 0.00 4.92
2550 2841 5.656213 ATTCATTTTCCTTTCTCTGGCAG 57.344 39.130 8.58 8.58 0.00 4.85
2551 2842 4.371624 TCATTTTCCTTTCTCTGGCAGA 57.628 40.909 17.68 17.68 0.00 4.26
2552 2843 4.728772 TCATTTTCCTTTCTCTGGCAGAA 58.271 39.130 19.29 6.96 39.56 3.02
2559 2850 3.498774 TTTCTCTGGCAGAAAGAAGCT 57.501 42.857 19.29 0.00 44.78 3.74
2560 2851 2.758736 TCTCTGGCAGAAAGAAGCTC 57.241 50.000 19.29 0.00 0.00 4.09
2561 2852 1.973515 TCTCTGGCAGAAAGAAGCTCA 59.026 47.619 19.29 0.00 0.00 4.26
2562 2853 2.570752 TCTCTGGCAGAAAGAAGCTCAT 59.429 45.455 19.29 0.00 0.00 2.90
2563 2854 3.008813 TCTCTGGCAGAAAGAAGCTCATT 59.991 43.478 19.29 0.00 0.00 2.57
2564 2855 3.757493 CTCTGGCAGAAAGAAGCTCATTT 59.243 43.478 19.29 0.00 0.00 2.32
2565 2856 3.755378 TCTGGCAGAAAGAAGCTCATTTC 59.245 43.478 16.28 13.21 35.99 2.17
2566 2857 3.757493 CTGGCAGAAAGAAGCTCATTTCT 59.243 43.478 9.42 16.48 44.53 2.52
2567 2858 4.147321 TGGCAGAAAGAAGCTCATTTCTT 58.853 39.130 18.62 7.77 46.50 2.52
2577 2868 7.998753 AGAAGCTCATTTCTTTTCTTTGTTG 57.001 32.000 0.00 0.00 33.74 3.33
2578 2869 6.478016 AGAAGCTCATTTCTTTTCTTTGTTGC 59.522 34.615 0.00 0.00 33.74 4.17
2579 2870 5.663456 AGCTCATTTCTTTTCTTTGTTGCA 58.337 33.333 0.00 0.00 0.00 4.08
2580 2871 6.108015 AGCTCATTTCTTTTCTTTGTTGCAA 58.892 32.000 0.00 0.00 0.00 4.08
2581 2872 6.594937 AGCTCATTTCTTTTCTTTGTTGCAAA 59.405 30.769 0.00 0.00 0.00 3.68
2582 2873 7.281549 AGCTCATTTCTTTTCTTTGTTGCAAAT 59.718 29.630 0.00 0.00 0.00 2.32
2583 2874 8.550376 GCTCATTTCTTTTCTTTGTTGCAAATA 58.450 29.630 0.00 0.00 0.00 1.40
2589 2880 9.985730 TTCTTTTCTTTGTTGCAAATATCATCT 57.014 25.926 0.00 0.00 0.00 2.90
2590 2881 9.630098 TCTTTTCTTTGTTGCAAATATCATCTC 57.370 29.630 0.00 0.00 0.00 2.75
2591 2882 9.414295 CTTTTCTTTGTTGCAAATATCATCTCA 57.586 29.630 0.00 0.00 0.00 3.27
2592 2883 9.932207 TTTTCTTTGTTGCAAATATCATCTCAT 57.068 25.926 0.00 0.00 0.00 2.90
2593 2884 9.932207 TTTCTTTGTTGCAAATATCATCTCATT 57.068 25.926 0.00 0.00 0.00 2.57
2594 2885 9.932207 TTCTTTGTTGCAAATATCATCTCATTT 57.068 25.926 0.00 0.00 0.00 2.32
2595 2886 9.932207 TCTTTGTTGCAAATATCATCTCATTTT 57.068 25.926 0.00 0.00 0.00 1.82
2598 2889 9.932207 TTGTTGCAAATATCATCTCATTTTTCT 57.068 25.926 0.00 0.00 0.00 2.52
2627 2918 8.960591 TCCTTTGAATTTTCTATCTCATGAACC 58.039 33.333 0.00 0.00 0.00 3.62
2628 2919 8.193438 CCTTTGAATTTTCTATCTCATGAACCC 58.807 37.037 0.00 0.00 0.00 4.11
2629 2920 8.648698 TTTGAATTTTCTATCTCATGAACCCA 57.351 30.769 0.00 0.00 0.00 4.51
2630 2921 8.648698 TTGAATTTTCTATCTCATGAACCCAA 57.351 30.769 0.00 0.00 0.00 4.12
2631 2922 8.648698 TGAATTTTCTATCTCATGAACCCAAA 57.351 30.769 0.00 0.00 0.00 3.28
2632 2923 9.087871 TGAATTTTCTATCTCATGAACCCAAAA 57.912 29.630 0.00 0.00 0.00 2.44
2633 2924 9.927668 GAATTTTCTATCTCATGAACCCAAAAA 57.072 29.630 0.00 2.55 0.00 1.94
2634 2925 9.933723 AATTTTCTATCTCATGAACCCAAAAAG 57.066 29.630 0.00 0.00 0.00 2.27
2635 2926 7.466746 TTTCTATCTCATGAACCCAAAAAGG 57.533 36.000 0.00 0.00 37.03 3.11
2636 2927 6.139679 TCTATCTCATGAACCCAAAAAGGT 57.860 37.500 0.00 0.00 44.00 3.50
2644 2935 2.979814 ACCCAAAAAGGTTCTTGTGC 57.020 45.000 0.00 0.00 36.44 4.57
2645 2936 1.136110 ACCCAAAAAGGTTCTTGTGCG 59.864 47.619 0.00 0.00 36.44 5.34
2646 2937 1.136110 CCCAAAAAGGTTCTTGTGCGT 59.864 47.619 0.00 0.00 34.66 5.24
2647 2938 2.359531 CCCAAAAAGGTTCTTGTGCGTA 59.640 45.455 0.00 0.00 34.66 4.42
2648 2939 3.181485 CCCAAAAAGGTTCTTGTGCGTAA 60.181 43.478 0.00 0.00 34.66 3.18
2649 2940 4.041723 CCAAAAAGGTTCTTGTGCGTAAG 58.958 43.478 0.00 0.00 43.44 2.34
2650 2941 4.439563 CCAAAAAGGTTCTTGTGCGTAAGT 60.440 41.667 0.47 0.00 41.68 2.24
2651 2942 3.963383 AAAGGTTCTTGTGCGTAAGTG 57.037 42.857 0.47 0.00 41.68 3.16
2652 2943 2.902705 AGGTTCTTGTGCGTAAGTGA 57.097 45.000 0.47 0.00 41.68 3.41
2653 2944 2.755650 AGGTTCTTGTGCGTAAGTGAG 58.244 47.619 0.47 0.00 41.68 3.51
2654 2945 2.364324 AGGTTCTTGTGCGTAAGTGAGA 59.636 45.455 0.47 0.00 41.68 3.27
2655 2946 3.006967 AGGTTCTTGTGCGTAAGTGAGAT 59.993 43.478 0.47 0.00 41.68 2.75
2656 2947 3.368236 GGTTCTTGTGCGTAAGTGAGATC 59.632 47.826 0.47 0.00 41.68 2.75
2657 2948 2.863739 TCTTGTGCGTAAGTGAGATCG 58.136 47.619 0.47 0.00 41.68 3.69
2661 2952 3.330766 GCGTAAGTGAGATCGCTGT 57.669 52.632 0.00 0.00 44.28 4.40
2662 2953 2.470196 GCGTAAGTGAGATCGCTGTA 57.530 50.000 0.00 0.00 44.28 2.74
2663 2954 2.376956 GCGTAAGTGAGATCGCTGTAG 58.623 52.381 0.00 0.00 44.28 2.74
2664 2955 2.855187 GCGTAAGTGAGATCGCTGTAGG 60.855 54.545 0.00 0.48 44.28 3.18
2665 2956 2.612672 CGTAAGTGAGATCGCTGTAGGA 59.387 50.000 0.00 0.00 36.72 2.94
2666 2957 3.064958 CGTAAGTGAGATCGCTGTAGGAA 59.935 47.826 0.00 0.00 36.72 3.36
2667 2958 4.261238 CGTAAGTGAGATCGCTGTAGGAAT 60.261 45.833 0.00 0.00 36.72 3.01
2668 2959 5.049612 CGTAAGTGAGATCGCTGTAGGAATA 60.050 44.000 0.00 0.00 36.72 1.75
2669 2960 5.446143 AAGTGAGATCGCTGTAGGAATAG 57.554 43.478 0.00 0.00 36.72 1.73
2670 2961 4.465886 AGTGAGATCGCTGTAGGAATAGT 58.534 43.478 0.00 0.00 35.04 2.12
2671 2962 4.277174 AGTGAGATCGCTGTAGGAATAGTG 59.723 45.833 0.00 0.00 35.04 2.74
2672 2963 3.004839 TGAGATCGCTGTAGGAATAGTGC 59.995 47.826 0.00 0.00 0.00 4.40
2673 2964 2.959030 AGATCGCTGTAGGAATAGTGCA 59.041 45.455 0.00 0.00 0.00 4.57
2674 2965 2.579207 TCGCTGTAGGAATAGTGCAC 57.421 50.000 9.40 9.40 0.00 4.57
2675 2966 1.136305 TCGCTGTAGGAATAGTGCACC 59.864 52.381 14.63 0.00 0.00 5.01
2676 2967 1.134818 CGCTGTAGGAATAGTGCACCA 60.135 52.381 14.63 0.00 0.00 4.17
2677 2968 2.280628 GCTGTAGGAATAGTGCACCAC 58.719 52.381 14.63 2.38 34.10 4.16
2678 2969 2.354704 GCTGTAGGAATAGTGCACCACA 60.355 50.000 14.63 5.72 36.74 4.17
2679 2970 3.682718 GCTGTAGGAATAGTGCACCACAT 60.683 47.826 14.63 1.39 36.74 3.21
2680 2971 4.517285 CTGTAGGAATAGTGCACCACATT 58.483 43.478 14.63 10.83 36.74 2.71
2681 2972 5.670485 CTGTAGGAATAGTGCACCACATTA 58.330 41.667 14.63 0.00 36.74 1.90
2682 2973 5.670485 TGTAGGAATAGTGCACCACATTAG 58.330 41.667 14.63 0.00 36.74 1.73
2683 2974 5.423931 TGTAGGAATAGTGCACCACATTAGA 59.576 40.000 14.63 0.00 36.74 2.10
2684 2975 5.028549 AGGAATAGTGCACCACATTAGAG 57.971 43.478 14.63 0.00 36.74 2.43
2685 2976 3.561725 GGAATAGTGCACCACATTAGAGC 59.438 47.826 14.63 0.00 36.74 4.09
2686 2977 3.912496 ATAGTGCACCACATTAGAGCA 57.088 42.857 14.63 0.00 36.74 4.26
2687 2978 2.795231 AGTGCACCACATTAGAGCAT 57.205 45.000 14.63 0.00 37.56 3.79
2688 2979 2.636830 AGTGCACCACATTAGAGCATC 58.363 47.619 14.63 0.00 37.56 3.91
2689 2980 2.238144 AGTGCACCACATTAGAGCATCT 59.762 45.455 14.63 0.00 42.75 2.90
2690 2981 2.611292 GTGCACCACATTAGAGCATCTC 59.389 50.000 5.22 0.00 39.51 2.75
2691 2982 3.928441 GTGCACCACATTAGAGCATCTCA 60.928 47.826 5.22 0.00 39.51 3.27
2692 2983 5.396011 GTGCACCACATTAGAGCATCTCAA 61.396 45.833 5.22 0.00 39.51 3.02
2693 2984 6.826793 GTGCACCACATTAGAGCATCTCAAA 61.827 44.000 5.22 0.00 39.51 2.69
2694 2985 8.746623 GTGCACCACATTAGAGCATCTCAAAC 62.747 46.154 5.22 0.00 39.51 2.93
2712 3003 7.428020 TCTCAAACAGATGATGAAAAACTTGG 58.572 34.615 0.00 0.00 0.00 3.61
2713 3004 7.068593 TCTCAAACAGATGATGAAAAACTTGGT 59.931 33.333 0.00 0.00 0.00 3.67
2714 3005 6.979817 TCAAACAGATGATGAAAAACTTGGTG 59.020 34.615 0.00 0.00 0.00 4.17
2715 3006 6.713762 AACAGATGATGAAAAACTTGGTGA 57.286 33.333 0.00 0.00 0.00 4.02
2716 3007 6.906157 ACAGATGATGAAAAACTTGGTGAT 57.094 33.333 0.00 0.00 0.00 3.06
2717 3008 6.684686 ACAGATGATGAAAAACTTGGTGATG 58.315 36.000 0.00 0.00 0.00 3.07
2718 3009 6.491062 ACAGATGATGAAAAACTTGGTGATGA 59.509 34.615 0.00 0.00 0.00 2.92
2719 3010 7.014518 ACAGATGATGAAAAACTTGGTGATGAA 59.985 33.333 0.00 0.00 0.00 2.57
2720 3011 7.868922 CAGATGATGAAAAACTTGGTGATGAAA 59.131 33.333 0.00 0.00 0.00 2.69
2721 3012 8.423349 AGATGATGAAAAACTTGGTGATGAAAA 58.577 29.630 0.00 0.00 0.00 2.29
2722 3013 8.961294 ATGATGAAAAACTTGGTGATGAAAAA 57.039 26.923 0.00 0.00 0.00 1.94
2743 3034 7.663043 AAAAACATTTTTAGGGTAGGTGACA 57.337 32.000 0.45 0.00 38.50 3.58
2744 3035 6.894339 AAACATTTTTAGGGTAGGTGACAG 57.106 37.500 0.00 0.00 0.00 3.51
2745 3036 5.836024 ACATTTTTAGGGTAGGTGACAGA 57.164 39.130 0.00 0.00 0.00 3.41
2746 3037 6.195600 ACATTTTTAGGGTAGGTGACAGAA 57.804 37.500 0.00 0.00 0.00 3.02
2747 3038 6.238648 ACATTTTTAGGGTAGGTGACAGAAG 58.761 40.000 0.00 0.00 0.00 2.85
2748 3039 4.903045 TTTTAGGGTAGGTGACAGAAGG 57.097 45.455 0.00 0.00 0.00 3.46
2749 3040 3.555117 TTAGGGTAGGTGACAGAAGGT 57.445 47.619 0.00 0.00 0.00 3.50
2750 3041 2.417719 AGGGTAGGTGACAGAAGGTT 57.582 50.000 0.00 0.00 0.00 3.50
2751 3042 2.702748 AGGGTAGGTGACAGAAGGTTT 58.297 47.619 0.00 0.00 0.00 3.27
2752 3043 3.053826 AGGGTAGGTGACAGAAGGTTTT 58.946 45.455 0.00 0.00 0.00 2.43
2753 3044 3.072622 AGGGTAGGTGACAGAAGGTTTTC 59.927 47.826 0.00 0.00 0.00 2.29
2754 3045 3.072622 GGGTAGGTGACAGAAGGTTTTCT 59.927 47.826 0.00 0.00 44.45 2.52
2763 3054 2.250924 AGAAGGTTTTCTGGCAATGGG 58.749 47.619 0.00 0.00 42.04 4.00
2764 3055 2.158325 AGAAGGTTTTCTGGCAATGGGA 60.158 45.455 0.00 0.00 42.04 4.37
2765 3056 2.629017 AGGTTTTCTGGCAATGGGAT 57.371 45.000 0.00 0.00 0.00 3.85
2766 3057 2.460669 AGGTTTTCTGGCAATGGGATC 58.539 47.619 0.00 0.00 0.00 3.36
2767 3058 2.043526 AGGTTTTCTGGCAATGGGATCT 59.956 45.455 0.00 0.00 0.00 2.75
2768 3059 2.833943 GGTTTTCTGGCAATGGGATCTT 59.166 45.455 0.00 0.00 0.00 2.40
2769 3060 3.368739 GGTTTTCTGGCAATGGGATCTTG 60.369 47.826 0.00 0.00 0.00 3.02
2770 3061 2.905415 TTCTGGCAATGGGATCTTGT 57.095 45.000 0.00 0.00 0.00 3.16
2771 3062 2.905415 TCTGGCAATGGGATCTTGTT 57.095 45.000 0.00 0.00 0.00 2.83
2772 3063 2.449464 TCTGGCAATGGGATCTTGTTG 58.551 47.619 0.00 0.00 0.00 3.33
2773 3064 0.896923 TGGCAATGGGATCTTGTTGC 59.103 50.000 16.03 16.03 44.55 4.17
2774 3065 1.188863 GGCAATGGGATCTTGTTGCT 58.811 50.000 20.47 0.00 44.64 3.91
2775 3066 1.551883 GGCAATGGGATCTTGTTGCTT 59.448 47.619 20.47 0.00 44.64 3.91
2776 3067 2.613691 GCAATGGGATCTTGTTGCTTG 58.386 47.619 16.65 4.32 42.61 4.01
2777 3068 2.231964 GCAATGGGATCTTGTTGCTTGA 59.768 45.455 16.65 0.00 42.61 3.02
2778 3069 3.306225 GCAATGGGATCTTGTTGCTTGAA 60.306 43.478 16.65 0.00 42.61 2.69
2779 3070 4.240096 CAATGGGATCTTGTTGCTTGAAC 58.760 43.478 0.00 0.00 34.84 3.18
2780 3071 2.942804 TGGGATCTTGTTGCTTGAACA 58.057 42.857 0.00 0.00 43.11 3.18
2781 3072 2.622942 TGGGATCTTGTTGCTTGAACAC 59.377 45.455 0.00 0.00 44.53 3.32
2782 3073 2.622942 GGGATCTTGTTGCTTGAACACA 59.377 45.455 0.00 0.00 44.53 3.72
2783 3074 3.550842 GGGATCTTGTTGCTTGAACACAC 60.551 47.826 0.00 0.00 44.53 3.82
2784 3075 2.823196 TCTTGTTGCTTGAACACACG 57.177 45.000 0.00 0.00 44.53 4.49
2785 3076 2.351455 TCTTGTTGCTTGAACACACGA 58.649 42.857 0.00 0.00 44.53 4.35
2786 3077 2.942376 TCTTGTTGCTTGAACACACGAT 59.058 40.909 0.00 0.00 44.53 3.73
2787 3078 2.753989 TGTTGCTTGAACACACGATG 57.246 45.000 0.00 0.00 39.78 3.84
2788 3079 2.013400 TGTTGCTTGAACACACGATGT 58.987 42.857 0.00 0.00 46.42 3.06
2789 3080 3.198872 TGTTGCTTGAACACACGATGTA 58.801 40.909 0.00 0.00 42.31 2.29
2790 3081 3.623510 TGTTGCTTGAACACACGATGTAA 59.376 39.130 0.00 0.00 42.31 2.41
2791 3082 4.095036 TGTTGCTTGAACACACGATGTAAA 59.905 37.500 0.00 0.00 42.31 2.01
2792 3083 4.884458 TGCTTGAACACACGATGTAAAA 57.116 36.364 0.00 0.00 42.31 1.52
2793 3084 4.593157 TGCTTGAACACACGATGTAAAAC 58.407 39.130 0.00 0.00 42.31 2.43
2794 3085 4.334203 TGCTTGAACACACGATGTAAAACT 59.666 37.500 0.00 0.00 42.31 2.66
2795 3086 4.670621 GCTTGAACACACGATGTAAAACTG 59.329 41.667 0.00 0.00 42.31 3.16
2796 3087 4.804608 TGAACACACGATGTAAAACTGG 57.195 40.909 0.00 0.00 42.31 4.00
2797 3088 4.193090 TGAACACACGATGTAAAACTGGT 58.807 39.130 0.00 0.00 42.31 4.00
2798 3089 4.034626 TGAACACACGATGTAAAACTGGTG 59.965 41.667 0.00 0.00 42.31 4.17
2799 3090 2.289547 ACACACGATGTAAAACTGGTGC 59.710 45.455 0.00 0.00 40.88 5.01
2800 3091 1.877443 ACACGATGTAAAACTGGTGCC 59.123 47.619 0.00 0.00 0.00 5.01
2801 3092 1.876799 CACGATGTAAAACTGGTGCCA 59.123 47.619 0.00 0.00 0.00 4.92
2802 3093 2.292016 CACGATGTAAAACTGGTGCCAA 59.708 45.455 0.00 0.00 0.00 4.52
2803 3094 3.057596 CACGATGTAAAACTGGTGCCAAT 60.058 43.478 0.00 0.00 0.00 3.16
2804 3095 3.572255 ACGATGTAAAACTGGTGCCAATT 59.428 39.130 0.00 0.00 0.00 2.32
2805 3096 4.038642 ACGATGTAAAACTGGTGCCAATTT 59.961 37.500 0.00 0.00 0.00 1.82
2806 3097 4.987912 CGATGTAAAACTGGTGCCAATTTT 59.012 37.500 13.69 13.69 38.59 1.82
2807 3098 5.465056 CGATGTAAAACTGGTGCCAATTTTT 59.535 36.000 14.28 13.10 36.82 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 0.028637 GAGAATACGGACGGACGGAC 59.971 60.000 6.00 0.00 38.39 4.79
52 53 1.431488 CGAGAATACGGACGGACGGA 61.431 60.000 6.00 0.00 38.39 4.69
53 54 1.010350 CGAGAATACGGACGGACGG 60.010 63.158 6.00 0.00 38.39 4.79
54 55 4.584327 CGAGAATACGGACGGACG 57.416 61.111 0.00 0.00 40.31 4.79
95 112 2.203209 GCTAAGGGGCCGACATGG 60.203 66.667 0.00 0.00 42.50 3.66
111 128 2.650813 AAGCGATCGACATGAGGGGC 62.651 60.000 21.57 0.00 0.00 5.80
112 129 0.179073 AAAGCGATCGACATGAGGGG 60.179 55.000 21.57 0.00 0.00 4.79
113 130 2.509052 TAAAGCGATCGACATGAGGG 57.491 50.000 21.57 0.00 0.00 4.30
114 131 3.363378 GCATTAAAGCGATCGACATGAGG 60.363 47.826 21.57 3.94 0.00 3.86
115 132 3.363378 GGCATTAAAGCGATCGACATGAG 60.363 47.826 21.57 3.37 34.64 2.90
116 133 2.543848 GGCATTAAAGCGATCGACATGA 59.456 45.455 21.57 0.96 34.64 3.07
117 134 2.660094 CGGCATTAAAGCGATCGACATG 60.660 50.000 21.57 12.75 34.64 3.21
118 135 1.526887 CGGCATTAAAGCGATCGACAT 59.473 47.619 21.57 5.72 34.64 3.06
148 185 1.077086 TGGAGTAGCGGTACCACCA 59.923 57.895 26.30 26.30 38.47 4.17
157 194 2.264794 GGTGGTGGTGGAGTAGCG 59.735 66.667 0.00 0.00 0.00 4.26
158 195 2.264794 CGGTGGTGGTGGAGTAGC 59.735 66.667 0.00 0.00 0.00 3.58
160 197 2.202053 ACCGGTGGTGGTGGAGTA 59.798 61.111 6.12 0.00 41.85 2.59
177 216 2.411418 CGTTCGTACTACGTGTACTGCA 60.411 50.000 19.16 0.00 46.89 4.41
178 217 2.159841 TCGTTCGTACTACGTGTACTGC 60.160 50.000 19.16 11.58 46.89 4.40
203 247 8.802856 ACGTACGTATCTAACTCGATGATATAC 58.197 37.037 21.41 0.00 0.00 1.47
205 249 7.330454 ACACGTACGTATCTAACTCGATGATAT 59.670 37.037 22.34 0.00 0.00 1.63
209 253 5.075670 ACACGTACGTATCTAACTCGATG 57.924 43.478 22.34 6.36 0.00 3.84
223 267 7.219344 TGTCATGTCTCATAATTAACACGTACG 59.781 37.037 15.01 15.01 0.00 3.67
224 268 8.318876 GTGTCATGTCTCATAATTAACACGTAC 58.681 37.037 0.00 0.00 0.00 3.67
225 269 8.402326 GTGTCATGTCTCATAATTAACACGTA 57.598 34.615 0.00 0.00 0.00 3.57
226 270 7.290857 GTGTCATGTCTCATAATTAACACGT 57.709 36.000 0.00 0.00 0.00 4.49
228 272 7.520119 TCGTGTCATGTCTCATAATTAACAC 57.480 36.000 0.00 0.00 33.07 3.32
229 273 9.463443 CTATCGTGTCATGTCTCATAATTAACA 57.537 33.333 0.00 0.00 0.00 2.41
230 274 9.678941 TCTATCGTGTCATGTCTCATAATTAAC 57.321 33.333 0.00 0.00 0.00 2.01
243 287 3.062099 CACCGGTTTTCTATCGTGTCATG 59.938 47.826 2.97 0.00 0.00 3.07
244 288 3.259064 CACCGGTTTTCTATCGTGTCAT 58.741 45.455 2.97 0.00 0.00 3.06
245 289 2.610976 CCACCGGTTTTCTATCGTGTCA 60.611 50.000 2.97 0.00 0.00 3.58
249 293 1.269012 TCCCACCGGTTTTCTATCGT 58.731 50.000 2.97 0.00 0.00 3.73
250 294 2.614829 ATCCCACCGGTTTTCTATCG 57.385 50.000 2.97 0.00 0.00 2.92
267 323 0.681175 AACCTGCAAGTGCCCAAATC 59.319 50.000 0.00 0.00 41.18 2.17
302 361 9.764363 AGCATAATTAAGAGATTCGTTCATGTA 57.236 29.630 0.00 0.00 0.00 2.29
304 363 8.226448 GGAGCATAATTAAGAGATTCGTTCATG 58.774 37.037 0.00 0.00 0.00 3.07
305 364 7.933577 TGGAGCATAATTAAGAGATTCGTTCAT 59.066 33.333 0.00 0.00 0.00 2.57
306 365 7.224753 GTGGAGCATAATTAAGAGATTCGTTCA 59.775 37.037 0.00 0.00 0.00 3.18
307 366 7.567771 CGTGGAGCATAATTAAGAGATTCGTTC 60.568 40.741 0.00 0.00 0.00 3.95
308 367 6.201044 CGTGGAGCATAATTAAGAGATTCGTT 59.799 38.462 0.00 0.00 0.00 3.85
309 368 5.692204 CGTGGAGCATAATTAAGAGATTCGT 59.308 40.000 0.00 0.00 0.00 3.85
388 470 4.238654 ACGTGAAAACGCCGGGGA 62.239 61.111 27.23 0.00 36.44 4.81
477 575 4.632458 GAGGGAGATCGCGTCGGC 62.632 72.222 5.77 1.44 0.00 5.54
478 576 3.187699 CTGAGGGAGATCGCGTCGG 62.188 68.421 5.77 0.00 0.00 4.79
479 577 2.329690 CTGAGGGAGATCGCGTCG 59.670 66.667 5.77 0.00 0.00 5.12
480 578 2.725008 CCTGAGGGAGATCGCGTC 59.275 66.667 5.77 2.98 33.58 5.19
481 579 3.532155 GCCTGAGGGAGATCGCGT 61.532 66.667 5.77 0.00 33.58 6.01
482 580 4.292178 GGCCTGAGGGAGATCGCG 62.292 72.222 0.00 0.00 33.58 5.87
497 595 2.360475 GAGTGGTTGGGCTGAGGC 60.360 66.667 0.00 0.00 37.82 4.70
498 596 2.046892 CGAGTGGTTGGGCTGAGG 60.047 66.667 0.00 0.00 0.00 3.86
500 598 2.425592 CACGAGTGGTTGGGCTGA 59.574 61.111 0.00 0.00 0.00 4.26
501 599 2.111043 ACACGAGTGGTTGGGCTG 59.889 61.111 8.19 0.00 34.19 4.85
502 600 2.111043 CACACGAGTGGTTGGGCT 59.889 61.111 4.94 0.00 42.13 5.19
511 609 1.532868 GTACGTACTCCACACACGAGT 59.467 52.381 18.47 0.00 43.05 4.18
512 610 1.532437 TGTACGTACTCCACACACGAG 59.468 52.381 25.12 0.00 38.96 4.18
513 611 1.592064 TGTACGTACTCCACACACGA 58.408 50.000 25.12 0.00 38.96 4.35
514 612 2.404265 TTGTACGTACTCCACACACG 57.596 50.000 25.12 0.00 41.32 4.49
515 613 4.797471 TGTATTGTACGTACTCCACACAC 58.203 43.478 25.12 13.46 0.00 3.82
516 614 5.450592 TTGTATTGTACGTACTCCACACA 57.549 39.130 25.12 17.53 0.00 3.72
517 615 6.094719 TCATTGTATTGTACGTACTCCACAC 58.905 40.000 25.12 15.53 0.00 3.82
518 616 6.270156 TCATTGTATTGTACGTACTCCACA 57.730 37.500 25.12 20.54 0.00 4.17
519 617 6.141844 CGATCATTGTATTGTACGTACTCCAC 59.858 42.308 25.12 18.54 0.00 4.02
520 618 6.183360 ACGATCATTGTATTGTACGTACTCCA 60.183 38.462 25.12 13.52 31.96 3.86
521 619 6.204359 ACGATCATTGTATTGTACGTACTCC 58.796 40.000 25.12 11.33 31.96 3.85
522 620 7.852454 TGTACGATCATTGTATTGTACGTACTC 59.148 37.037 25.12 13.57 44.58 2.59
523 621 7.641411 GTGTACGATCATTGTATTGTACGTACT 59.359 37.037 25.12 9.79 44.58 2.73
530 628 8.347771 AGTATACGTGTACGATCATTGTATTGT 58.652 33.333 15.60 0.00 43.02 2.71
536 634 6.196571 TGTCAGTATACGTGTACGATCATTG 58.803 40.000 15.60 8.42 43.02 2.82
537 635 6.367686 TGTCAGTATACGTGTACGATCATT 57.632 37.500 15.60 0.00 43.02 2.57
538 636 5.996669 TGTCAGTATACGTGTACGATCAT 57.003 39.130 15.60 4.19 43.02 2.45
539 637 5.728621 GCTTGTCAGTATACGTGTACGATCA 60.729 44.000 15.60 12.60 43.02 2.92
541 639 4.095334 TGCTTGTCAGTATACGTGTACGAT 59.905 41.667 15.60 0.00 43.02 3.73
542 640 3.436359 TGCTTGTCAGTATACGTGTACGA 59.564 43.478 15.60 13.01 43.02 3.43
544 642 4.978186 TCTGCTTGTCAGTATACGTGTAC 58.022 43.478 14.01 14.01 43.32 2.90
545 643 5.392703 CCTTCTGCTTGTCAGTATACGTGTA 60.393 44.000 0.00 0.00 43.32 2.90
546 644 4.486090 CTTCTGCTTGTCAGTATACGTGT 58.514 43.478 0.00 0.00 43.32 4.49
549 647 3.119101 ACCCTTCTGCTTGTCAGTATACG 60.119 47.826 0.00 0.00 43.32 3.06
550 648 4.081642 TCACCCTTCTGCTTGTCAGTATAC 60.082 45.833 0.00 0.00 43.32 1.47
551 649 4.093743 TCACCCTTCTGCTTGTCAGTATA 58.906 43.478 0.00 0.00 43.32 1.47
552 650 2.906389 TCACCCTTCTGCTTGTCAGTAT 59.094 45.455 0.00 0.00 43.32 2.12
553 651 2.325484 TCACCCTTCTGCTTGTCAGTA 58.675 47.619 0.00 0.00 43.32 2.74
554 652 1.131638 TCACCCTTCTGCTTGTCAGT 58.868 50.000 0.00 0.00 43.32 3.41
555 653 2.149578 CTTCACCCTTCTGCTTGTCAG 58.850 52.381 0.00 0.00 44.21 3.51
556 654 1.490490 ACTTCACCCTTCTGCTTGTCA 59.510 47.619 0.00 0.00 0.00 3.58
557 655 2.262423 ACTTCACCCTTCTGCTTGTC 57.738 50.000 0.00 0.00 0.00 3.18
565 663 2.239400 CCCCAAGAAACTTCACCCTTC 58.761 52.381 0.00 0.00 0.00 3.46
575 673 3.216800 ACTACGTTTTCCCCCAAGAAAC 58.783 45.455 0.00 0.00 35.53 2.78
578 676 2.029110 CGTACTACGTTTTCCCCCAAGA 60.029 50.000 0.00 0.00 36.74 3.02
579 677 2.340337 CGTACTACGTTTTCCCCCAAG 58.660 52.381 0.00 0.00 36.74 3.61
580 678 1.001860 CCGTACTACGTTTTCCCCCAA 59.998 52.381 7.79 0.00 40.58 4.12
581 679 0.607620 CCGTACTACGTTTTCCCCCA 59.392 55.000 7.79 0.00 40.58 4.96
582 680 0.894835 TCCGTACTACGTTTTCCCCC 59.105 55.000 7.79 0.00 40.58 5.40
585 683 2.925563 CACCATCCGTACTACGTTTTCC 59.074 50.000 7.79 0.00 40.58 3.13
586 684 3.836949 TCACCATCCGTACTACGTTTTC 58.163 45.455 7.79 0.00 40.58 2.29
587 685 3.940209 TCACCATCCGTACTACGTTTT 57.060 42.857 7.79 0.00 40.58 2.43
588 686 4.082081 TGAATCACCATCCGTACTACGTTT 60.082 41.667 7.79 0.00 40.58 3.60
589 687 3.444742 TGAATCACCATCCGTACTACGTT 59.555 43.478 7.79 0.00 40.58 3.99
590 688 3.018856 TGAATCACCATCCGTACTACGT 58.981 45.455 7.79 0.00 40.58 3.57
591 689 3.369385 GTGAATCACCATCCGTACTACG 58.631 50.000 1.10 1.32 42.11 3.51
605 703 2.756207 CAGTGATGGCAATGGTGAATCA 59.244 45.455 0.00 0.00 36.51 2.57
610 708 1.138036 CGCAGTGATGGCAATGGTG 59.862 57.895 0.00 0.00 40.28 4.17
634 732 1.000739 TTACCCTCCCGGTCGACAT 59.999 57.895 18.91 0.00 43.58 3.06
645 743 2.608268 GTCGCTGTTCTTCTTACCCTC 58.392 52.381 0.00 0.00 0.00 4.30
646 744 1.067776 CGTCGCTGTTCTTCTTACCCT 60.068 52.381 0.00 0.00 0.00 4.34
647 745 1.336609 ACGTCGCTGTTCTTCTTACCC 60.337 52.381 0.00 0.00 0.00 3.69
650 748 1.933500 GCCACGTCGCTGTTCTTCTTA 60.934 52.381 0.00 0.00 0.00 2.10
673 800 1.604308 TGCATGCAACTGGACCTGG 60.604 57.895 20.30 0.00 0.00 4.45
674 801 1.174078 TGTGCATGCAACTGGACCTG 61.174 55.000 24.58 0.00 36.72 4.00
675 802 0.251474 ATGTGCATGCAACTGGACCT 60.251 50.000 24.58 0.00 36.72 3.85
676 803 0.171903 GATGTGCATGCAACTGGACC 59.828 55.000 24.58 8.72 36.72 4.46
677 804 0.171903 GGATGTGCATGCAACTGGAC 59.828 55.000 24.58 9.53 37.91 4.02
678 805 0.251253 TGGATGTGCATGCAACTGGA 60.251 50.000 24.58 3.72 36.19 3.86
679 806 0.108992 GTGGATGTGCATGCAACTGG 60.109 55.000 24.58 0.00 40.81 4.00
680 807 0.599060 TGTGGATGTGCATGCAACTG 59.401 50.000 24.58 0.00 40.81 3.16
681 808 0.599558 GTGTGGATGTGCATGCAACT 59.400 50.000 24.58 12.84 40.81 3.16
768 901 3.818787 CACATGCAGCCGCCTTCC 61.819 66.667 0.00 0.00 37.32 3.46
840 990 1.535462 CACTTGATCAACACCGGTTCC 59.465 52.381 2.97 0.00 34.21 3.62
851 1001 1.078918 CGAGCCAGCCACTTGATCA 60.079 57.895 0.00 0.00 0.00 2.92
912 1062 1.305930 CCCTTTTGTACTCGCTGGGC 61.306 60.000 0.00 0.00 0.00 5.36
948 1098 1.963338 GCTGGGGCTGATACGATGC 60.963 63.158 0.00 0.00 35.22 3.91
1007 1158 4.516195 GGGAGGAAGACGGCGAGC 62.516 72.222 16.62 4.95 0.00 5.03
1033 1184 2.884685 CTCTGCCTCTTGCGAGCG 60.885 66.667 0.00 0.00 45.60 5.03
1267 1424 1.209275 CTACGGCGATGGAAGAAGCG 61.209 60.000 16.62 0.00 0.00 4.68
1271 1428 1.735376 GAGGCTACGGCGATGGAAGA 61.735 60.000 16.62 0.00 39.81 2.87
1273 1430 2.792947 GGAGGCTACGGCGATGGAA 61.793 63.158 16.62 0.00 39.81 3.53
1277 1437 4.541648 AGGGGAGGCTACGGCGAT 62.542 66.667 16.62 0.00 39.81 4.58
1622 1809 2.742372 CGGAAGTGGTGGAAGGCG 60.742 66.667 0.00 0.00 0.00 5.52
1638 1825 4.319911 CGGCTCCTATCTAGTTTCTTCTCG 60.320 50.000 0.00 0.00 0.00 4.04
1639 1826 4.557895 GCGGCTCCTATCTAGTTTCTTCTC 60.558 50.000 0.00 0.00 0.00 2.87
1640 1827 3.319689 GCGGCTCCTATCTAGTTTCTTCT 59.680 47.826 0.00 0.00 0.00 2.85
1641 1828 3.319689 AGCGGCTCCTATCTAGTTTCTTC 59.680 47.826 0.00 0.00 0.00 2.87
1642 1829 3.301274 AGCGGCTCCTATCTAGTTTCTT 58.699 45.455 0.00 0.00 0.00 2.52
1726 1943 6.757010 ACTCGCCTAAATTGACATTAGTAGTG 59.243 38.462 0.00 0.00 0.00 2.74
1740 1957 1.927895 CTTCGCTCACTCGCCTAAAT 58.072 50.000 0.00 0.00 0.00 1.40
1819 2038 0.514691 GCACAAGAAGGCAACGAGAG 59.485 55.000 0.00 0.00 46.39 3.20
1822 2041 1.896660 GGGCACAAGAAGGCAACGA 60.897 57.895 0.00 0.00 46.39 3.85
1841 2062 3.102097 CCGAGAAATCAAGGCGCC 58.898 61.111 21.89 21.89 0.00 6.53
1845 2066 0.673644 ACACGGCCGAGAAATCAAGG 60.674 55.000 35.90 9.57 0.00 3.61
1854 2075 4.368808 CGCAACAACACGGCCGAG 62.369 66.667 35.90 28.39 0.00 4.63
1879 2100 3.149196 AGAACGCAAATGAGAATGGTGT 58.851 40.909 0.00 0.00 0.00 4.16
1880 2101 3.837213 AGAACGCAAATGAGAATGGTG 57.163 42.857 0.00 0.00 0.00 4.17
1881 2102 3.120199 CGAAGAACGCAAATGAGAATGGT 60.120 43.478 0.00 0.00 34.51 3.55
1892 2113 1.081509 GCATTGCCGAAGAACGCAA 60.082 52.632 0.00 0.00 40.15 4.85
1919 2140 3.365265 CCCAGCAACAACTCCGGC 61.365 66.667 0.00 0.00 0.00 6.13
1927 2148 1.885887 GCACAGTTAATCCCAGCAACA 59.114 47.619 0.00 0.00 0.00 3.33
1931 2152 1.470098 CACTGCACAGTTAATCCCAGC 59.530 52.381 0.00 0.00 40.20 4.85
1932 2153 1.470098 GCACTGCACAGTTAATCCCAG 59.530 52.381 0.00 0.00 40.20 4.45
1942 2163 0.457035 AAACCAACTGCACTGCACAG 59.543 50.000 0.00 1.47 41.08 3.66
1943 2164 0.455410 GAAACCAACTGCACTGCACA 59.545 50.000 0.00 0.00 33.79 4.57
1961 2245 1.011968 CCGCTCCATTGAAACGACGA 61.012 55.000 0.00 0.00 0.00 4.20
1963 2247 0.672401 TCCCGCTCCATTGAAACGAC 60.672 55.000 0.00 0.00 0.00 4.34
1986 2270 4.340246 CAGGCACAGGCAGGCTCA 62.340 66.667 0.00 0.00 43.71 4.26
1987 2271 3.857309 AACAGGCACAGGCAGGCTC 62.857 63.158 0.00 0.00 43.71 4.70
2012 2296 0.817654 CCAAATTTCGGCCTCCTTCC 59.182 55.000 0.00 0.00 0.00 3.46
2016 2300 0.902984 AACCCCAAATTTCGGCCTCC 60.903 55.000 0.00 0.00 0.00 4.30
2020 2304 1.295101 CCCAACCCCAAATTTCGGC 59.705 57.895 0.00 0.00 0.00 5.54
2023 2307 1.295101 CCGCCCAACCCCAAATTTC 59.705 57.895 0.00 0.00 0.00 2.17
2044 2328 3.431725 GAAAACCCGGCGCTCCAG 61.432 66.667 7.64 0.00 0.00 3.86
2065 2349 1.657181 CGTTGTTGCTTGGTTCGCC 60.657 57.895 0.00 0.00 37.92 5.54
2068 2352 1.657181 CGCCGTTGTTGCTTGGTTC 60.657 57.895 0.00 0.00 0.00 3.62
2079 2363 3.788766 CCTTTCTCCGCGCCGTTG 61.789 66.667 0.00 0.00 0.00 4.10
2097 2381 2.315038 GAAATTCAGGAGCGCCGCTG 62.315 60.000 20.07 2.60 39.88 5.18
2122 2406 2.047844 CACGCACTCCACCTCCAG 60.048 66.667 0.00 0.00 0.00 3.86
2141 2425 0.387239 GCATTTGCTGACACGGGAAC 60.387 55.000 0.00 0.00 38.21 3.62
2142 2426 1.523154 GGCATTTGCTGACACGGGAA 61.523 55.000 0.00 0.00 41.70 3.97
2143 2427 1.971167 GGCATTTGCTGACACGGGA 60.971 57.895 0.00 0.00 41.70 5.14
2144 2428 2.203972 CTGGCATTTGCTGACACGGG 62.204 60.000 2.12 0.00 38.24 5.28
2145 2429 1.210931 CTGGCATTTGCTGACACGG 59.789 57.895 2.12 0.00 38.24 4.94
2146 2430 0.592637 TTCTGGCATTTGCTGACACG 59.407 50.000 2.12 0.00 38.24 4.49
2147 2431 2.490903 AGATTCTGGCATTTGCTGACAC 59.509 45.455 2.12 0.02 38.24 3.67
2168 2452 3.976793 ACAGAGTTACAGAAACGACGA 57.023 42.857 0.00 0.00 43.29 4.20
2204 2489 0.821301 TTTGCTGACATGGGAACGCA 60.821 50.000 0.00 0.00 0.00 5.24
2224 2509 3.564027 GGGAACGCGATTCAGCCG 61.564 66.667 15.93 0.00 39.30 5.52
2239 2526 1.961793 TCACGGAAACACAGAAAGGG 58.038 50.000 0.00 0.00 0.00 3.95
2241 2528 2.680841 TGGTTCACGGAAACACAGAAAG 59.319 45.455 0.87 0.00 34.05 2.62
2243 2530 2.404923 TGGTTCACGGAAACACAGAA 57.595 45.000 0.87 0.00 34.05 3.02
2258 2545 1.588674 TTCGAAGTGCAATCGTGGTT 58.411 45.000 19.07 0.00 40.99 3.67
2260 2547 1.725931 GCTTTCGAAGTGCAATCGTGG 60.726 52.381 19.07 12.66 40.99 4.94
2263 2550 0.163788 ACGCTTTCGAAGTGCAATCG 59.836 50.000 19.97 15.06 42.69 3.34
2264 2551 1.461127 AGACGCTTTCGAAGTGCAATC 59.539 47.619 19.97 16.57 42.69 2.67
2265 2552 1.195448 CAGACGCTTTCGAAGTGCAAT 59.805 47.619 19.97 10.71 42.69 3.56
2276 2564 0.880278 ACGTGCATCACAGACGCTTT 60.880 50.000 0.00 0.00 36.56 3.51
2280 2568 0.436150 CTGAACGTGCATCACAGACG 59.564 55.000 0.00 0.00 39.03 4.18
2283 2571 1.661178 GCAACTGAACGTGCATCACAG 60.661 52.381 0.00 0.40 33.40 3.66
2287 2575 2.245096 GAATGCAACTGAACGTGCATC 58.755 47.619 11.22 2.83 45.83 3.91
2291 2579 3.469629 CTTACGAATGCAACTGAACGTG 58.530 45.455 0.00 0.00 35.66 4.49
2305 2593 7.094890 TGCGGTTTTATATTTCAACCTTACGAA 60.095 33.333 0.00 0.00 38.28 3.85
2306 2594 6.370994 TGCGGTTTTATATTTCAACCTTACGA 59.629 34.615 0.00 0.00 38.28 3.43
2307 2595 6.544622 TGCGGTTTTATATTTCAACCTTACG 58.455 36.000 8.14 0.00 38.28 3.18
2308 2596 7.754625 TCTGCGGTTTTATATTTCAACCTTAC 58.245 34.615 0.00 0.00 38.28 2.34
2309 2597 7.925043 TCTGCGGTTTTATATTTCAACCTTA 57.075 32.000 0.00 0.00 38.28 2.69
2342 2633 2.430694 ACAAACCAAAGAAGGCCTTGAC 59.569 45.455 26.25 9.77 34.79 3.18
2348 2639 4.648651 TCCTAGTACAAACCAAAGAAGGC 58.351 43.478 0.00 0.00 0.00 4.35
2397 2688 9.120658 TGGAAGATAAGGATCCATTCATAATCT 57.879 33.333 15.82 3.95 38.30 2.40
2398 2689 9.171877 GTGGAAGATAAGGATCCATTCATAATC 57.828 37.037 15.82 1.44 44.55 1.75
2399 2690 7.826252 CGTGGAAGATAAGGATCCATTCATAAT 59.174 37.037 15.82 0.00 44.55 1.28
2400 2691 7.161404 CGTGGAAGATAAGGATCCATTCATAA 58.839 38.462 15.82 0.00 44.55 1.90
2401 2692 6.270000 ACGTGGAAGATAAGGATCCATTCATA 59.730 38.462 15.82 0.00 44.55 2.15
2402 2693 5.072329 ACGTGGAAGATAAGGATCCATTCAT 59.928 40.000 15.82 0.54 44.55 2.57
2403 2694 4.408921 ACGTGGAAGATAAGGATCCATTCA 59.591 41.667 15.82 0.00 44.55 2.57
2404 2695 4.962155 ACGTGGAAGATAAGGATCCATTC 58.038 43.478 15.82 7.49 44.55 2.67
2405 2696 5.373812 AACGTGGAAGATAAGGATCCATT 57.626 39.130 15.82 8.04 44.55 3.16
2406 2697 5.104527 TGAAACGTGGAAGATAAGGATCCAT 60.105 40.000 15.82 4.17 44.55 3.41
2407 2698 4.224147 TGAAACGTGGAAGATAAGGATCCA 59.776 41.667 15.82 0.00 40.84 3.41
2408 2699 4.766375 TGAAACGTGGAAGATAAGGATCC 58.234 43.478 2.48 2.48 31.81 3.36
2409 2700 6.594159 TCTTTGAAACGTGGAAGATAAGGATC 59.406 38.462 0.00 0.00 0.00 3.36
2410 2701 6.472887 TCTTTGAAACGTGGAAGATAAGGAT 58.527 36.000 0.00 0.00 0.00 3.24
2411 2702 5.860611 TCTTTGAAACGTGGAAGATAAGGA 58.139 37.500 0.00 0.00 0.00 3.36
2412 2703 6.017440 TGTTCTTTGAAACGTGGAAGATAAGG 60.017 38.462 0.00 0.00 31.58 2.69
2413 2704 6.954944 TGTTCTTTGAAACGTGGAAGATAAG 58.045 36.000 0.00 0.00 31.58 1.73
2414 2705 6.928979 TGTTCTTTGAAACGTGGAAGATAA 57.071 33.333 0.00 0.00 31.58 1.75
2415 2706 6.928979 TTGTTCTTTGAAACGTGGAAGATA 57.071 33.333 0.00 0.00 31.58 1.98
2416 2707 5.828299 TTGTTCTTTGAAACGTGGAAGAT 57.172 34.783 0.00 0.00 31.58 2.40
2417 2708 5.630661 TTTGTTCTTTGAAACGTGGAAGA 57.369 34.783 0.00 0.00 31.58 2.87
2418 2709 5.631512 TGTTTTGTTCTTTGAAACGTGGAAG 59.368 36.000 0.00 0.00 36.36 3.46
2419 2710 5.529791 TGTTTTGTTCTTTGAAACGTGGAA 58.470 33.333 0.00 0.00 36.36 3.53
2420 2711 5.122512 TGTTTTGTTCTTTGAAACGTGGA 57.877 34.783 0.00 0.00 36.36 4.02
2421 2712 6.239945 CAATGTTTTGTTCTTTGAAACGTGG 58.760 36.000 0.00 0.00 36.36 4.94
2422 2713 6.239945 CCAATGTTTTGTTCTTTGAAACGTG 58.760 36.000 0.00 0.00 36.36 4.49
2423 2714 5.163903 GCCAATGTTTTGTTCTTTGAAACGT 60.164 36.000 0.00 0.00 36.36 3.99
2424 2715 5.163913 TGCCAATGTTTTGTTCTTTGAAACG 60.164 36.000 0.00 0.00 36.36 3.60
2425 2716 6.020984 GTGCCAATGTTTTGTTCTTTGAAAC 58.979 36.000 0.00 0.00 34.67 2.78
2426 2717 5.163913 CGTGCCAATGTTTTGTTCTTTGAAA 60.164 36.000 0.00 0.00 0.00 2.69
2427 2718 4.328440 CGTGCCAATGTTTTGTTCTTTGAA 59.672 37.500 0.00 0.00 0.00 2.69
2428 2719 3.862267 CGTGCCAATGTTTTGTTCTTTGA 59.138 39.130 0.00 0.00 0.00 2.69
2429 2720 3.001127 CCGTGCCAATGTTTTGTTCTTTG 59.999 43.478 0.00 0.00 0.00 2.77
2430 2721 3.118956 TCCGTGCCAATGTTTTGTTCTTT 60.119 39.130 0.00 0.00 0.00 2.52
2431 2722 2.428890 TCCGTGCCAATGTTTTGTTCTT 59.571 40.909 0.00 0.00 0.00 2.52
2432 2723 2.028130 TCCGTGCCAATGTTTTGTTCT 58.972 42.857 0.00 0.00 0.00 3.01
2433 2724 2.124122 GTCCGTGCCAATGTTTTGTTC 58.876 47.619 0.00 0.00 0.00 3.18
2434 2725 1.202475 GGTCCGTGCCAATGTTTTGTT 60.202 47.619 0.00 0.00 0.00 2.83
2435 2726 0.387565 GGTCCGTGCCAATGTTTTGT 59.612 50.000 0.00 0.00 0.00 2.83
2436 2727 0.673437 AGGTCCGTGCCAATGTTTTG 59.327 50.000 0.00 0.00 0.00 2.44
2437 2728 2.279935 TAGGTCCGTGCCAATGTTTT 57.720 45.000 0.00 0.00 0.00 2.43
2438 2729 2.279935 TTAGGTCCGTGCCAATGTTT 57.720 45.000 0.00 0.00 0.00 2.83
2439 2730 2.091541 CATTAGGTCCGTGCCAATGTT 58.908 47.619 0.00 0.00 0.00 2.71
2440 2731 1.280710 TCATTAGGTCCGTGCCAATGT 59.719 47.619 12.50 0.00 33.20 2.71
2441 2732 2.036958 TCATTAGGTCCGTGCCAATG 57.963 50.000 9.31 9.31 32.96 2.82
2442 2733 2.799126 TTCATTAGGTCCGTGCCAAT 57.201 45.000 0.00 0.00 0.00 3.16
2443 2734 2.570415 TTTCATTAGGTCCGTGCCAA 57.430 45.000 0.00 0.00 0.00 4.52
2444 2735 2.570415 TTTTCATTAGGTCCGTGCCA 57.430 45.000 0.00 0.00 0.00 4.92
2445 2736 3.694566 AGAATTTTCATTAGGTCCGTGCC 59.305 43.478 0.00 0.00 0.00 5.01
2446 2737 4.636206 AGAGAATTTTCATTAGGTCCGTGC 59.364 41.667 0.00 0.00 0.00 5.34
2447 2738 7.171678 GGATAGAGAATTTTCATTAGGTCCGTG 59.828 40.741 0.00 0.00 0.00 4.94
2448 2739 7.071321 AGGATAGAGAATTTTCATTAGGTCCGT 59.929 37.037 0.00 0.00 0.00 4.69
2449 2740 7.445945 AGGATAGAGAATTTTCATTAGGTCCG 58.554 38.462 0.00 0.00 0.00 4.79
2477 2768 9.220767 GAAGAGATGTCACTTGGTTTATACTTT 57.779 33.333 0.00 0.00 0.00 2.66
2478 2769 7.545965 CGAAGAGATGTCACTTGGTTTATACTT 59.454 37.037 0.00 0.00 0.00 2.24
2479 2770 7.036220 CGAAGAGATGTCACTTGGTTTATACT 58.964 38.462 0.00 0.00 0.00 2.12
2480 2771 6.237861 GCGAAGAGATGTCACTTGGTTTATAC 60.238 42.308 0.00 0.00 0.00 1.47
2481 2772 5.810587 GCGAAGAGATGTCACTTGGTTTATA 59.189 40.000 0.00 0.00 0.00 0.98
2482 2773 4.631813 GCGAAGAGATGTCACTTGGTTTAT 59.368 41.667 0.00 0.00 0.00 1.40
2483 2774 3.994392 GCGAAGAGATGTCACTTGGTTTA 59.006 43.478 0.00 0.00 0.00 2.01
2484 2775 2.808543 GCGAAGAGATGTCACTTGGTTT 59.191 45.455 0.00 0.00 0.00 3.27
2485 2776 2.037772 AGCGAAGAGATGTCACTTGGTT 59.962 45.455 0.00 0.00 0.00 3.67
2486 2777 1.620819 AGCGAAGAGATGTCACTTGGT 59.379 47.619 0.00 0.00 0.00 3.67
2487 2778 2.376808 AGCGAAGAGATGTCACTTGG 57.623 50.000 0.00 0.00 0.00 3.61
2488 2779 3.838120 TGTAGCGAAGAGATGTCACTTG 58.162 45.455 0.00 0.00 0.00 3.16
2489 2780 4.489810 CTTGTAGCGAAGAGATGTCACTT 58.510 43.478 0.00 0.00 0.00 3.16
2490 2781 3.119316 CCTTGTAGCGAAGAGATGTCACT 60.119 47.826 0.00 0.00 0.00 3.41
2491 2782 3.182967 CCTTGTAGCGAAGAGATGTCAC 58.817 50.000 0.00 0.00 0.00 3.67
2492 2783 2.417379 GCCTTGTAGCGAAGAGATGTCA 60.417 50.000 0.00 0.00 0.00 3.58
2493 2784 2.159170 AGCCTTGTAGCGAAGAGATGTC 60.159 50.000 0.00 0.00 38.01 3.06
2494 2785 1.827969 AGCCTTGTAGCGAAGAGATGT 59.172 47.619 0.00 0.00 38.01 3.06
2495 2786 2.159184 TCAGCCTTGTAGCGAAGAGATG 60.159 50.000 0.00 0.00 38.01 2.90
2496 2787 2.100584 CTCAGCCTTGTAGCGAAGAGAT 59.899 50.000 0.00 0.00 38.01 2.75
2497 2788 1.474478 CTCAGCCTTGTAGCGAAGAGA 59.526 52.381 0.00 0.00 38.01 3.10
2498 2789 1.474478 TCTCAGCCTTGTAGCGAAGAG 59.526 52.381 0.00 0.00 38.01 2.85
2499 2790 1.545841 TCTCAGCCTTGTAGCGAAGA 58.454 50.000 0.00 0.00 38.01 2.87
2500 2791 2.593346 ATCTCAGCCTTGTAGCGAAG 57.407 50.000 0.00 0.00 38.01 3.79
2501 2792 2.758423 TGTATCTCAGCCTTGTAGCGAA 59.242 45.455 0.00 0.00 38.01 4.70
2502 2793 2.375146 TGTATCTCAGCCTTGTAGCGA 58.625 47.619 0.00 0.00 38.01 4.93
2503 2794 2.871182 TGTATCTCAGCCTTGTAGCG 57.129 50.000 0.00 0.00 38.01 4.26
2504 2795 4.054671 GACATGTATCTCAGCCTTGTAGC 58.945 47.826 0.00 0.00 0.00 3.58
2505 2796 5.268118 TGACATGTATCTCAGCCTTGTAG 57.732 43.478 0.00 0.00 0.00 2.74
2506 2797 5.675684 TTGACATGTATCTCAGCCTTGTA 57.324 39.130 0.00 0.00 0.00 2.41
2507 2798 4.558226 TTGACATGTATCTCAGCCTTGT 57.442 40.909 0.00 0.00 0.00 3.16
2508 2799 5.587443 TGAATTGACATGTATCTCAGCCTTG 59.413 40.000 0.00 0.00 0.00 3.61
2509 2800 5.748402 TGAATTGACATGTATCTCAGCCTT 58.252 37.500 0.00 0.00 0.00 4.35
2510 2801 5.363562 TGAATTGACATGTATCTCAGCCT 57.636 39.130 0.00 0.00 0.00 4.58
2511 2802 6.630444 AATGAATTGACATGTATCTCAGCC 57.370 37.500 0.00 0.00 0.00 4.85
2512 2803 7.646922 GGAAAATGAATTGACATGTATCTCAGC 59.353 37.037 0.00 0.00 0.00 4.26
2513 2804 8.900781 AGGAAAATGAATTGACATGTATCTCAG 58.099 33.333 0.00 0.00 0.00 3.35
2514 2805 8.812513 AGGAAAATGAATTGACATGTATCTCA 57.187 30.769 0.00 0.00 0.00 3.27
2519 2810 9.300681 AGAGAAAGGAAAATGAATTGACATGTA 57.699 29.630 0.00 0.00 0.00 2.29
2520 2811 8.086522 CAGAGAAAGGAAAATGAATTGACATGT 58.913 33.333 0.00 0.00 0.00 3.21
2521 2812 7.544566 CCAGAGAAAGGAAAATGAATTGACATG 59.455 37.037 0.00 0.00 0.00 3.21
2522 2813 7.609056 CCAGAGAAAGGAAAATGAATTGACAT 58.391 34.615 0.00 0.00 0.00 3.06
2523 2814 6.517194 GCCAGAGAAAGGAAAATGAATTGACA 60.517 38.462 0.00 0.00 0.00 3.58
2524 2815 5.866092 GCCAGAGAAAGGAAAATGAATTGAC 59.134 40.000 0.00 0.00 0.00 3.18
2525 2816 5.539574 TGCCAGAGAAAGGAAAATGAATTGA 59.460 36.000 0.00 0.00 0.00 2.57
2526 2817 5.786311 TGCCAGAGAAAGGAAAATGAATTG 58.214 37.500 0.00 0.00 0.00 2.32
2527 2818 5.776716 TCTGCCAGAGAAAGGAAAATGAATT 59.223 36.000 0.00 0.00 0.00 2.17
2528 2819 5.327732 TCTGCCAGAGAAAGGAAAATGAAT 58.672 37.500 0.00 0.00 0.00 2.57
2529 2820 4.728772 TCTGCCAGAGAAAGGAAAATGAA 58.271 39.130 0.00 0.00 0.00 2.57
2530 2821 4.371624 TCTGCCAGAGAAAGGAAAATGA 57.628 40.909 0.00 0.00 0.00 2.57
2531 2822 5.458041 TTTCTGCCAGAGAAAGGAAAATG 57.542 39.130 0.00 0.00 44.32 2.32
2539 2830 3.181451 TGAGCTTCTTTCTGCCAGAGAAA 60.181 43.478 0.00 0.00 46.52 2.52
2540 2831 2.369860 TGAGCTTCTTTCTGCCAGAGAA 59.630 45.455 0.00 0.00 39.05 2.87
2541 2832 1.973515 TGAGCTTCTTTCTGCCAGAGA 59.026 47.619 0.00 0.00 0.00 3.10
2542 2833 2.469274 TGAGCTTCTTTCTGCCAGAG 57.531 50.000 0.00 0.00 0.00 3.35
2543 2834 3.430042 AATGAGCTTCTTTCTGCCAGA 57.570 42.857 0.00 0.00 0.00 3.86
2544 2835 3.757493 AGAAATGAGCTTCTTTCTGCCAG 59.243 43.478 18.42 0.00 39.58 4.85
2545 2836 3.759581 AGAAATGAGCTTCTTTCTGCCA 58.240 40.909 18.42 0.00 39.58 4.92
2546 2837 4.780275 AAGAAATGAGCTTCTTTCTGCC 57.220 40.909 19.34 0.00 41.81 4.85
2552 2843 7.010830 GCAACAAAGAAAAGAAATGAGCTTCTT 59.989 33.333 0.00 0.00 45.49 2.52
2553 2844 6.478016 GCAACAAAGAAAAGAAATGAGCTTCT 59.522 34.615 0.00 0.00 37.24 2.85
2554 2845 6.256321 TGCAACAAAGAAAAGAAATGAGCTTC 59.744 34.615 0.00 0.00 0.00 3.86
2555 2846 6.108015 TGCAACAAAGAAAAGAAATGAGCTT 58.892 32.000 0.00 0.00 0.00 3.74
2556 2847 5.663456 TGCAACAAAGAAAAGAAATGAGCT 58.337 33.333 0.00 0.00 0.00 4.09
2557 2848 5.971895 TGCAACAAAGAAAAGAAATGAGC 57.028 34.783 0.00 0.00 0.00 4.26
2563 2854 9.985730 AGATGATATTTGCAACAAAGAAAAGAA 57.014 25.926 0.00 0.00 0.00 2.52
2564 2855 9.630098 GAGATGATATTTGCAACAAAGAAAAGA 57.370 29.630 0.00 0.00 0.00 2.52
2565 2856 9.414295 TGAGATGATATTTGCAACAAAGAAAAG 57.586 29.630 0.00 0.00 0.00 2.27
2566 2857 9.932207 ATGAGATGATATTTGCAACAAAGAAAA 57.068 25.926 0.00 0.00 0.00 2.29
2567 2858 9.932207 AATGAGATGATATTTGCAACAAAGAAA 57.068 25.926 0.00 0.00 0.00 2.52
2568 2859 9.932207 AAATGAGATGATATTTGCAACAAAGAA 57.068 25.926 0.00 0.00 0.00 2.52
2569 2860 9.932207 AAAATGAGATGATATTTGCAACAAAGA 57.068 25.926 0.00 0.00 0.00 2.52
2572 2863 9.932207 AGAAAAATGAGATGATATTTGCAACAA 57.068 25.926 0.00 0.00 0.00 2.83
2601 2892 8.960591 GGTTCATGAGATAGAAAATTCAAAGGA 58.039 33.333 0.00 0.00 0.00 3.36
2602 2893 8.193438 GGGTTCATGAGATAGAAAATTCAAAGG 58.807 37.037 0.00 0.00 0.00 3.11
2603 2894 8.742777 TGGGTTCATGAGATAGAAAATTCAAAG 58.257 33.333 0.00 0.00 0.00 2.77
2604 2895 8.648698 TGGGTTCATGAGATAGAAAATTCAAA 57.351 30.769 0.00 0.00 0.00 2.69
2605 2896 8.648698 TTGGGTTCATGAGATAGAAAATTCAA 57.351 30.769 0.00 0.00 0.00 2.69
2606 2897 8.648698 TTTGGGTTCATGAGATAGAAAATTCA 57.351 30.769 0.00 0.00 0.00 2.57
2607 2898 9.927668 TTTTTGGGTTCATGAGATAGAAAATTC 57.072 29.630 0.00 0.00 0.00 2.17
2608 2899 9.933723 CTTTTTGGGTTCATGAGATAGAAAATT 57.066 29.630 0.00 0.00 0.00 1.82
2609 2900 8.534496 CCTTTTTGGGTTCATGAGATAGAAAAT 58.466 33.333 0.00 0.00 0.00 1.82
2610 2901 7.508977 ACCTTTTTGGGTTCATGAGATAGAAAA 59.491 33.333 0.00 2.48 41.11 2.29
2611 2902 7.010160 ACCTTTTTGGGTTCATGAGATAGAAA 58.990 34.615 0.00 0.00 41.11 2.52
2612 2903 6.552008 ACCTTTTTGGGTTCATGAGATAGAA 58.448 36.000 0.00 0.00 41.11 2.10
2613 2904 6.139679 ACCTTTTTGGGTTCATGAGATAGA 57.860 37.500 0.00 0.00 41.11 1.98
2614 2905 6.840780 AACCTTTTTGGGTTCATGAGATAG 57.159 37.500 0.00 0.00 45.38 2.08
2625 2916 1.136110 CGCACAAGAACCTTTTTGGGT 59.864 47.619 0.00 0.00 42.05 4.51
2626 2917 1.136110 ACGCACAAGAACCTTTTTGGG 59.864 47.619 0.00 0.00 41.11 4.12
2627 2918 2.577449 ACGCACAAGAACCTTTTTGG 57.423 45.000 0.00 0.00 42.93 3.28
2628 2919 4.499040 CACTTACGCACAAGAACCTTTTTG 59.501 41.667 1.51 0.00 0.00 2.44
2629 2920 4.396790 TCACTTACGCACAAGAACCTTTTT 59.603 37.500 1.51 0.00 0.00 1.94
2630 2921 3.942748 TCACTTACGCACAAGAACCTTTT 59.057 39.130 1.51 0.00 0.00 2.27
2631 2922 3.537580 TCACTTACGCACAAGAACCTTT 58.462 40.909 1.51 0.00 0.00 3.11
2632 2923 3.131396 CTCACTTACGCACAAGAACCTT 58.869 45.455 1.51 0.00 0.00 3.50
2633 2924 2.364324 TCTCACTTACGCACAAGAACCT 59.636 45.455 1.51 0.00 0.00 3.50
2634 2925 2.750948 TCTCACTTACGCACAAGAACC 58.249 47.619 1.51 0.00 0.00 3.62
2635 2926 3.059570 CGATCTCACTTACGCACAAGAAC 59.940 47.826 1.51 0.00 0.00 3.01
2636 2927 3.242518 CGATCTCACTTACGCACAAGAA 58.757 45.455 1.51 0.00 0.00 2.52
2637 2928 2.863739 CGATCTCACTTACGCACAAGA 58.136 47.619 1.51 0.00 0.00 3.02
2644 2935 2.612672 TCCTACAGCGATCTCACTTACG 59.387 50.000 0.00 0.00 0.00 3.18
2645 2936 4.634184 TTCCTACAGCGATCTCACTTAC 57.366 45.455 0.00 0.00 0.00 2.34
2646 2937 6.017026 CACTATTCCTACAGCGATCTCACTTA 60.017 42.308 0.00 0.00 0.00 2.24
2647 2938 4.890581 ACTATTCCTACAGCGATCTCACTT 59.109 41.667 0.00 0.00 0.00 3.16
2648 2939 4.277174 CACTATTCCTACAGCGATCTCACT 59.723 45.833 0.00 0.00 0.00 3.41
2649 2940 4.541779 CACTATTCCTACAGCGATCTCAC 58.458 47.826 0.00 0.00 0.00 3.51
2650 2941 3.004839 GCACTATTCCTACAGCGATCTCA 59.995 47.826 0.00 0.00 0.00 3.27
2651 2942 3.004839 TGCACTATTCCTACAGCGATCTC 59.995 47.826 0.00 0.00 0.00 2.75
2652 2943 2.959030 TGCACTATTCCTACAGCGATCT 59.041 45.455 0.00 0.00 0.00 2.75
2653 2944 3.053455 GTGCACTATTCCTACAGCGATC 58.947 50.000 10.32 0.00 0.00 3.69
2654 2945 2.224066 GGTGCACTATTCCTACAGCGAT 60.224 50.000 17.98 0.00 0.00 4.58
2655 2946 1.136305 GGTGCACTATTCCTACAGCGA 59.864 52.381 17.98 0.00 0.00 4.93
2656 2947 1.134818 TGGTGCACTATTCCTACAGCG 60.135 52.381 17.98 0.00 0.00 5.18
2657 2948 2.280628 GTGGTGCACTATTCCTACAGC 58.719 52.381 17.98 0.00 0.00 4.40
2658 2949 3.610040 TGTGGTGCACTATTCCTACAG 57.390 47.619 17.98 0.00 35.11 2.74
2659 2950 4.568072 AATGTGGTGCACTATTCCTACA 57.432 40.909 17.98 3.98 35.11 2.74
2660 2951 5.914033 TCTAATGTGGTGCACTATTCCTAC 58.086 41.667 17.98 0.00 35.11 3.18
2661 2952 5.453339 GCTCTAATGTGGTGCACTATTCCTA 60.453 44.000 17.98 0.88 35.11 2.94
2662 2953 4.684485 GCTCTAATGTGGTGCACTATTCCT 60.684 45.833 17.98 0.00 35.11 3.36
2663 2954 3.561725 GCTCTAATGTGGTGCACTATTCC 59.438 47.826 17.98 0.00 35.11 3.01
2664 2955 4.191544 TGCTCTAATGTGGTGCACTATTC 58.808 43.478 17.98 0.00 35.11 1.75
2665 2956 4.220693 TGCTCTAATGTGGTGCACTATT 57.779 40.909 17.98 16.24 35.11 1.73
2666 2957 3.912496 TGCTCTAATGTGGTGCACTAT 57.088 42.857 17.98 6.39 35.11 2.12
2667 2958 3.452264 AGATGCTCTAATGTGGTGCACTA 59.548 43.478 17.98 8.10 36.31 2.74
2668 2959 2.238144 AGATGCTCTAATGTGGTGCACT 59.762 45.455 17.98 0.00 36.31 4.40
2669 2960 2.611292 GAGATGCTCTAATGTGGTGCAC 59.389 50.000 8.80 8.80 36.31 4.57
2670 2961 2.236893 TGAGATGCTCTAATGTGGTGCA 59.763 45.455 0.00 0.00 37.54 4.57
2671 2962 2.910199 TGAGATGCTCTAATGTGGTGC 58.090 47.619 0.00 0.00 0.00 5.01
2672 2963 4.696877 TGTTTGAGATGCTCTAATGTGGTG 59.303 41.667 0.00 0.00 29.44 4.17
2673 2964 4.910195 TGTTTGAGATGCTCTAATGTGGT 58.090 39.130 0.00 0.00 29.44 4.16
2674 2965 5.181009 TCTGTTTGAGATGCTCTAATGTGG 58.819 41.667 0.00 0.00 29.44 4.17
2675 2966 6.922247 ATCTGTTTGAGATGCTCTAATGTG 57.078 37.500 0.00 0.00 40.19 3.21
2686 2977 8.086522 CCAAGTTTTTCATCATCTGTTTGAGAT 58.913 33.333 0.00 0.00 42.70 2.75
2687 2978 7.068593 ACCAAGTTTTTCATCATCTGTTTGAGA 59.931 33.333 0.00 0.00 34.25 3.27
2688 2979 7.168637 CACCAAGTTTTTCATCATCTGTTTGAG 59.831 37.037 0.00 0.00 0.00 3.02
2689 2980 6.979817 CACCAAGTTTTTCATCATCTGTTTGA 59.020 34.615 0.00 0.00 0.00 2.69
2690 2981 6.979817 TCACCAAGTTTTTCATCATCTGTTTG 59.020 34.615 0.00 0.00 0.00 2.93
2691 2982 7.111247 TCACCAAGTTTTTCATCATCTGTTT 57.889 32.000 0.00 0.00 0.00 2.83
2692 2983 6.713762 TCACCAAGTTTTTCATCATCTGTT 57.286 33.333 0.00 0.00 0.00 3.16
2693 2984 6.491062 TCATCACCAAGTTTTTCATCATCTGT 59.509 34.615 0.00 0.00 0.00 3.41
2694 2985 6.916440 TCATCACCAAGTTTTTCATCATCTG 58.084 36.000 0.00 0.00 0.00 2.90
2695 2986 7.528996 TTCATCACCAAGTTTTTCATCATCT 57.471 32.000 0.00 0.00 0.00 2.90
2696 2987 8.592105 TTTTCATCACCAAGTTTTTCATCATC 57.408 30.769 0.00 0.00 0.00 2.92
2697 2988 8.961294 TTTTTCATCACCAAGTTTTTCATCAT 57.039 26.923 0.00 0.00 0.00 2.45
2719 3010 7.562088 TCTGTCACCTACCCTAAAAATGTTTTT 59.438 33.333 8.36 8.36 42.51 1.94
2720 3011 7.064229 TCTGTCACCTACCCTAAAAATGTTTT 58.936 34.615 0.00 0.00 0.00 2.43
2721 3012 6.607019 TCTGTCACCTACCCTAAAAATGTTT 58.393 36.000 0.00 0.00 0.00 2.83
2722 3013 6.195600 TCTGTCACCTACCCTAAAAATGTT 57.804 37.500 0.00 0.00 0.00 2.71
2723 3014 5.836024 TCTGTCACCTACCCTAAAAATGT 57.164 39.130 0.00 0.00 0.00 2.71
2724 3015 5.648092 CCTTCTGTCACCTACCCTAAAAATG 59.352 44.000 0.00 0.00 0.00 2.32
2725 3016 5.312443 ACCTTCTGTCACCTACCCTAAAAAT 59.688 40.000 0.00 0.00 0.00 1.82
2726 3017 4.661709 ACCTTCTGTCACCTACCCTAAAAA 59.338 41.667 0.00 0.00 0.00 1.94
2727 3018 4.237018 ACCTTCTGTCACCTACCCTAAAA 58.763 43.478 0.00 0.00 0.00 1.52
2728 3019 3.865571 ACCTTCTGTCACCTACCCTAAA 58.134 45.455 0.00 0.00 0.00 1.85
2729 3020 3.555117 ACCTTCTGTCACCTACCCTAA 57.445 47.619 0.00 0.00 0.00 2.69
2730 3021 3.555117 AACCTTCTGTCACCTACCCTA 57.445 47.619 0.00 0.00 0.00 3.53
2731 3022 2.417719 AACCTTCTGTCACCTACCCT 57.582 50.000 0.00 0.00 0.00 4.34
2732 3023 3.072622 AGAAAACCTTCTGTCACCTACCC 59.927 47.826 0.00 0.00 40.54 3.69
2733 3024 4.353383 AGAAAACCTTCTGTCACCTACC 57.647 45.455 0.00 0.00 40.54 3.18
2743 3034 2.158325 TCCCATTGCCAGAAAACCTTCT 60.158 45.455 0.00 0.00 42.96 2.85
2744 3035 2.247358 TCCCATTGCCAGAAAACCTTC 58.753 47.619 0.00 0.00 0.00 3.46
2745 3036 2.397044 TCCCATTGCCAGAAAACCTT 57.603 45.000 0.00 0.00 0.00 3.50
2746 3037 2.043526 AGATCCCATTGCCAGAAAACCT 59.956 45.455 0.00 0.00 0.00 3.50
2747 3038 2.460669 AGATCCCATTGCCAGAAAACC 58.539 47.619 0.00 0.00 0.00 3.27
2748 3039 3.259123 ACAAGATCCCATTGCCAGAAAAC 59.741 43.478 0.00 0.00 0.00 2.43
2749 3040 3.509442 ACAAGATCCCATTGCCAGAAAA 58.491 40.909 0.00 0.00 0.00 2.29
2750 3041 3.173953 ACAAGATCCCATTGCCAGAAA 57.826 42.857 0.00 0.00 0.00 2.52
2751 3042 2.827322 CAACAAGATCCCATTGCCAGAA 59.173 45.455 0.00 0.00 0.00 3.02
2752 3043 2.449464 CAACAAGATCCCATTGCCAGA 58.551 47.619 0.00 0.00 0.00 3.86
2753 3044 1.134907 GCAACAAGATCCCATTGCCAG 60.135 52.381 12.25 0.00 41.25 4.85
2754 3045 0.896923 GCAACAAGATCCCATTGCCA 59.103 50.000 12.25 0.00 41.25 4.92
2755 3046 1.188863 AGCAACAAGATCCCATTGCC 58.811 50.000 17.30 4.99 46.89 4.52
2756 3047 2.231964 TCAAGCAACAAGATCCCATTGC 59.768 45.455 14.49 14.49 46.21 3.56
2757 3048 4.240096 GTTCAAGCAACAAGATCCCATTG 58.760 43.478 0.00 0.00 34.76 2.82
2758 3049 3.896888 TGTTCAAGCAACAAGATCCCATT 59.103 39.130 0.00 0.00 42.35 3.16
2759 3050 3.256631 GTGTTCAAGCAACAAGATCCCAT 59.743 43.478 0.00 0.00 46.90 4.00
2760 3051 2.622942 GTGTTCAAGCAACAAGATCCCA 59.377 45.455 0.00 0.00 46.90 4.37
2761 3052 2.622942 TGTGTTCAAGCAACAAGATCCC 59.377 45.455 0.00 0.00 46.90 3.85
2762 3053 3.632189 GTGTGTTCAAGCAACAAGATCC 58.368 45.455 0.00 0.00 46.90 3.36
2763 3054 3.002246 TCGTGTGTTCAAGCAACAAGATC 59.998 43.478 0.00 0.00 46.90 2.75
2764 3055 2.942376 TCGTGTGTTCAAGCAACAAGAT 59.058 40.909 0.00 0.00 46.90 2.40
2765 3056 2.351455 TCGTGTGTTCAAGCAACAAGA 58.649 42.857 0.00 0.00 46.90 3.02
2766 3057 2.823196 TCGTGTGTTCAAGCAACAAG 57.177 45.000 0.00 0.00 46.90 3.16
2767 3058 2.421775 ACATCGTGTGTTCAAGCAACAA 59.578 40.909 0.00 0.00 46.90 2.83
2768 3059 2.013400 ACATCGTGTGTTCAAGCAACA 58.987 42.857 0.00 0.00 43.12 3.33
2769 3060 2.755836 ACATCGTGTGTTCAAGCAAC 57.244 45.000 0.00 0.00 38.01 4.17
2770 3061 4.884458 TTTACATCGTGTGTTCAAGCAA 57.116 36.364 1.87 0.00 42.29 3.91
2771 3062 4.334203 AGTTTTACATCGTGTGTTCAAGCA 59.666 37.500 1.87 0.00 42.29 3.91
2772 3063 4.670621 CAGTTTTACATCGTGTGTTCAAGC 59.329 41.667 1.87 0.05 42.29 4.01
2773 3064 5.204833 CCAGTTTTACATCGTGTGTTCAAG 58.795 41.667 1.87 0.00 42.29 3.02
2774 3065 4.636648 ACCAGTTTTACATCGTGTGTTCAA 59.363 37.500 1.87 0.00 42.29 2.69
2775 3066 4.034626 CACCAGTTTTACATCGTGTGTTCA 59.965 41.667 1.87 0.00 42.29 3.18
2776 3067 4.523813 CACCAGTTTTACATCGTGTGTTC 58.476 43.478 1.87 0.00 42.29 3.18
2777 3068 3.242936 GCACCAGTTTTACATCGTGTGTT 60.243 43.478 1.87 0.00 42.29 3.32
2778 3069 2.289547 GCACCAGTTTTACATCGTGTGT 59.710 45.455 1.58 1.87 44.95 3.72
2779 3070 2.350388 GGCACCAGTTTTACATCGTGTG 60.350 50.000 1.58 0.00 0.00 3.82
2780 3071 1.877443 GGCACCAGTTTTACATCGTGT 59.123 47.619 0.00 0.00 0.00 4.49
2781 3072 1.876799 TGGCACCAGTTTTACATCGTG 59.123 47.619 0.00 0.00 0.00 4.35
2782 3073 2.264005 TGGCACCAGTTTTACATCGT 57.736 45.000 0.00 0.00 0.00 3.73
2783 3074 3.848272 ATTGGCACCAGTTTTACATCG 57.152 42.857 0.00 0.00 0.00 3.84
2784 3075 6.859420 AAAAATTGGCACCAGTTTTACATC 57.141 33.333 19.41 0.00 42.31 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.