Multiple sequence alignment - TraesCS3B01G038000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G038000 chr3B 100.000 2426 0 0 1 2426 18425830 18428255 0.000000e+00 4481.0
1 TraesCS3B01G038000 chr3B 86.456 1676 142 43 783 2410 18305814 18307452 0.000000e+00 1759.0
2 TraesCS3B01G038000 chr3B 82.803 1570 195 41 770 2298 18393619 18395154 0.000000e+00 1334.0
3 TraesCS3B01G038000 chr3B 81.046 1683 211 55 783 2426 18469263 18470876 0.000000e+00 1242.0
4 TraesCS3B01G038000 chr3B 86.402 706 67 19 783 1466 18484424 18485122 0.000000e+00 745.0
5 TraesCS3B01G038000 chr3B 83.101 503 46 10 1939 2424 18552201 18552681 2.880000e-114 422.0
6 TraesCS3B01G038000 chr3B 80.000 125 25 0 1977 2101 665446051 665445927 2.570000e-15 93.5
7 TraesCS3B01G038000 chr3D 83.529 1700 184 47 783 2426 12741082 12742741 0.000000e+00 1500.0
8 TraesCS3B01G038000 chr3D 84.207 1469 173 36 979 2426 12828830 12830260 0.000000e+00 1373.0
9 TraesCS3B01G038000 chr3D 82.769 1625 194 46 846 2426 12841094 12842676 0.000000e+00 1371.0
10 TraesCS3B01G038000 chr3D 81.302 1690 234 47 783 2424 12835503 12837158 0.000000e+00 1295.0
11 TraesCS3B01G038000 chr3D 85.930 661 76 8 1647 2292 12825182 12825840 0.000000e+00 689.0
12 TraesCS3B01G038000 chr3D 84.046 702 92 14 783 1466 12848265 12848964 0.000000e+00 658.0
13 TraesCS3B01G038000 chr3D 91.624 394 26 6 1 391 385392965 385393354 2.740000e-149 538.0
14 TraesCS3B01G038000 chr3D 91.414 396 29 4 1 394 455992710 455992318 2.740000e-149 538.0
15 TraesCS3B01G038000 chr3D 83.908 261 32 5 846 1100 12824918 12825174 8.670000e-60 241.0
16 TraesCS3B01G038000 chr3A 82.340 1359 183 33 1098 2426 24529448 24528117 0.000000e+00 1127.0
17 TraesCS3B01G038000 chr3A 83.757 1102 116 34 893 1961 24559896 24558825 0.000000e+00 985.0
18 TraesCS3B01G038000 chr3A 93.082 477 23 3 1959 2426 24563377 24562902 0.000000e+00 689.0
19 TraesCS3B01G038000 chr3A 88.550 131 6 3 566 692 24602439 24602314 1.500000e-32 150.0
20 TraesCS3B01G038000 chr3A 95.652 46 1 1 2010 2055 642348361 642348317 3.350000e-09 73.1
21 TraesCS3B01G038000 chr3A 84.000 75 5 7 393 462 156232027 156232099 5.600000e-07 65.8
22 TraesCS3B01G038000 chr5D 92.424 396 25 4 1 394 447927138 447926746 5.860000e-156 560.0
23 TraesCS3B01G038000 chr5D 91.624 394 28 4 1 392 447918741 447918351 7.630000e-150 540.0
24 TraesCS3B01G038000 chr5D 90.741 54 1 4 391 442 530428372 530428423 4.330000e-08 69.4
25 TraesCS3B01G038000 chr1D 92.366 393 25 4 1 391 14488766 14488377 2.730000e-154 555.0
26 TraesCS3B01G038000 chr1D 92.172 396 26 4 1 394 392003473 392003081 2.730000e-154 555.0
27 TraesCS3B01G038000 chr1D 91.414 396 29 4 1 394 14497739 14497347 2.740000e-149 538.0
28 TraesCS3B01G038000 chr1D 91.392 395 29 4 1 393 391986218 391985827 9.870000e-149 536.0
29 TraesCS3B01G038000 chr6D 91.414 396 29 4 1 394 154054382 154053990 2.740000e-149 538.0
30 TraesCS3B01G038000 chr5B 81.081 259 37 6 1929 2178 233204217 233203962 1.900000e-46 196.0
31 TraesCS3B01G038000 chr5B 92.453 53 4 0 396 448 478561390 478561338 2.590000e-10 76.8
32 TraesCS3B01G038000 chr5B 94.000 50 3 0 393 442 702567689 702567738 2.590000e-10 76.8
33 TraesCS3B01G038000 chr7D 83.333 138 19 2 1959 2096 6488056 6488189 9.110000e-25 124.0
34 TraesCS3B01G038000 chr1A 76.991 226 29 13 1968 2191 572996402 572996606 9.170000e-20 108.0
35 TraesCS3B01G038000 chr1A 95.455 44 2 0 2144 2187 324608162 324608119 1.200000e-08 71.3
36 TraesCS3B01G038000 chr1A 89.130 46 2 2 2004 2046 589966715 589966670 1.000000e-03 54.7
37 TraesCS3B01G038000 chr7B 98.000 50 1 0 393 442 211243170 211243219 1.190000e-13 87.9
38 TraesCS3B01G038000 chr7B 86.885 61 5 3 384 442 41286943 41287002 5.600000e-07 65.8
39 TraesCS3B01G038000 chr1B 91.228 57 5 0 393 449 683383542 683383598 7.190000e-11 78.7
40 TraesCS3B01G038000 chr2A 93.878 49 3 0 392 440 171843199 171843151 9.300000e-10 75.0
41 TraesCS3B01G038000 chr4A 86.765 68 5 4 399 464 647387612 647387547 3.350000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G038000 chr3B 18425830 18428255 2425 False 4481.000000 4481 100.000000 1 2426 1 chr3B.!!$F3 2425
1 TraesCS3B01G038000 chr3B 18305814 18307452 1638 False 1759.000000 1759 86.456000 783 2410 1 chr3B.!!$F1 1627
2 TraesCS3B01G038000 chr3B 18393619 18395154 1535 False 1334.000000 1334 82.803000 770 2298 1 chr3B.!!$F2 1528
3 TraesCS3B01G038000 chr3B 18469263 18470876 1613 False 1242.000000 1242 81.046000 783 2426 1 chr3B.!!$F4 1643
4 TraesCS3B01G038000 chr3B 18484424 18485122 698 False 745.000000 745 86.402000 783 1466 1 chr3B.!!$F5 683
5 TraesCS3B01G038000 chr3D 12741082 12742741 1659 False 1500.000000 1500 83.529000 783 2426 1 chr3D.!!$F1 1643
6 TraesCS3B01G038000 chr3D 12835503 12842676 7173 False 1333.000000 1371 82.035500 783 2426 2 chr3D.!!$F5 1643
7 TraesCS3B01G038000 chr3D 12824918 12830260 5342 False 767.666667 1373 84.681667 846 2426 3 chr3D.!!$F4 1580
8 TraesCS3B01G038000 chr3D 12848265 12848964 699 False 658.000000 658 84.046000 783 1466 1 chr3D.!!$F2 683
9 TraesCS3B01G038000 chr3A 24528117 24529448 1331 True 1127.000000 1127 82.340000 1098 2426 1 chr3A.!!$R1 1328
10 TraesCS3B01G038000 chr3A 24558825 24563377 4552 True 837.000000 985 88.419500 893 2426 2 chr3A.!!$R4 1533

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
975 9156 0.033781 CAGAGCAGGGCTAGCTGATC 59.966 60.0 15.72 14.07 43.58 2.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2302 14423 0.109723 GCCCACCCAGACAAGTTGTA 59.89 55.0 8.88 0.0 0.0 2.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
68 69 8.812972 AGTATTTCAACTTAGTCCATACTCACA 58.187 33.333 0.00 0.00 37.15 3.58
69 70 9.431887 GTATTTCAACTTAGTCCATACTCACAA 57.568 33.333 0.00 0.00 37.15 3.33
71 72 8.740123 TTTCAACTTAGTCCATACTCACAAAA 57.260 30.769 0.00 0.00 37.15 2.44
74 75 7.990886 TCAACTTAGTCCATACTCACAAAAAGT 59.009 33.333 0.00 0.00 37.15 2.66
75 76 9.268268 CAACTTAGTCCATACTCACAAAAAGTA 57.732 33.333 0.00 0.00 37.15 2.24
81 82 9.614792 AGTCCATACTCACAAAAAGTATAATCC 57.385 33.333 0.00 0.00 37.75 3.01
84 85 9.613428 CCATACTCACAAAAAGTATAATCCTCA 57.387 33.333 0.00 0.00 37.75 3.86
196 197 9.435688 AAACAATTTATAAAGGCATGGTTTCTC 57.564 29.630 3.94 0.00 0.00 2.87
197 198 7.555965 ACAATTTATAAAGGCATGGTTTCTCC 58.444 34.615 3.94 0.00 0.00 3.71
210 211 5.789574 TGGTTTCTCCACCATAATTACCT 57.210 39.130 0.00 0.00 42.27 3.08
211 212 6.894735 TGGTTTCTCCACCATAATTACCTA 57.105 37.500 0.00 0.00 42.27 3.08
212 213 7.460214 TGGTTTCTCCACCATAATTACCTAT 57.540 36.000 0.00 0.00 42.27 2.57
213 214 7.287061 TGGTTTCTCCACCATAATTACCTATG 58.713 38.462 0.00 0.00 42.27 2.23
217 218 7.090319 TCTCCACCATAATTACCTATGCAAT 57.910 36.000 0.00 0.00 0.00 3.56
220 221 9.466497 CTCCACCATAATTACCTATGCAATATT 57.534 33.333 0.00 0.00 0.00 1.28
221 222 9.821240 TCCACCATAATTACCTATGCAATATTT 57.179 29.630 0.00 0.00 0.00 1.40
223 224 9.773328 CACCATAATTACCTATGCAATATTTCG 57.227 33.333 0.00 0.00 0.00 3.46
224 225 9.515226 ACCATAATTACCTATGCAATATTTCGT 57.485 29.630 0.00 0.00 0.00 3.85
230 231 6.604735 ACCTATGCAATATTTCGTTCACTC 57.395 37.500 0.00 0.00 0.00 3.51
231 232 5.527582 ACCTATGCAATATTTCGTTCACTCC 59.472 40.000 0.00 0.00 0.00 3.85
232 233 4.536364 ATGCAATATTTCGTTCACTCCG 57.464 40.909 0.00 0.00 0.00 4.63
233 234 3.591023 TGCAATATTTCGTTCACTCCGA 58.409 40.909 0.00 0.00 0.00 4.55
234 235 3.997681 TGCAATATTTCGTTCACTCCGAA 59.002 39.130 0.00 0.00 42.08 4.30
246 247 5.828299 TTCACTCCGAACATTTTCAGTTT 57.172 34.783 0.00 0.00 0.00 2.66
247 248 5.828299 TCACTCCGAACATTTTCAGTTTT 57.172 34.783 0.00 0.00 0.00 2.43
248 249 6.928979 TCACTCCGAACATTTTCAGTTTTA 57.071 33.333 0.00 0.00 0.00 1.52
249 250 7.323049 TCACTCCGAACATTTTCAGTTTTAA 57.677 32.000 0.00 0.00 0.00 1.52
250 251 7.936584 TCACTCCGAACATTTTCAGTTTTAAT 58.063 30.769 0.00 0.00 0.00 1.40
251 252 9.058174 TCACTCCGAACATTTTCAGTTTTAATA 57.942 29.630 0.00 0.00 0.00 0.98
252 253 9.113876 CACTCCGAACATTTTCAGTTTTAATAC 57.886 33.333 0.00 0.00 0.00 1.89
253 254 9.063615 ACTCCGAACATTTTCAGTTTTAATACT 57.936 29.630 0.00 0.00 0.00 2.12
254 255 9.893305 CTCCGAACATTTTCAGTTTTAATACTT 57.107 29.630 0.00 0.00 0.00 2.24
255 256 9.672086 TCCGAACATTTTCAGTTTTAATACTTG 57.328 29.630 0.00 0.00 0.00 3.16
304 305 7.650834 TTGAATTTGAATTTGAATCGGTTCC 57.349 32.000 5.84 0.00 33.26 3.62
305 306 5.861251 TGAATTTGAATTTGAATCGGTTCCG 59.139 36.000 5.84 4.74 33.26 4.30
307 308 5.440234 TTTGAATTTGAATCGGTTCCGAA 57.560 34.783 17.72 1.30 41.89 4.30
308 309 4.413495 TGAATTTGAATCGGTTCCGAAC 57.587 40.909 17.72 14.43 41.89 3.95
310 311 5.239351 TGAATTTGAATCGGTTCCGAACTA 58.761 37.500 17.72 9.28 41.89 2.24
311 312 5.701750 TGAATTTGAATCGGTTCCGAACTAA 59.298 36.000 17.72 16.04 41.89 2.24
312 313 4.996062 TTTGAATCGGTTCCGAACTAAC 57.004 40.909 17.72 8.31 41.89 2.34
316 317 1.442520 CGGTTCCGAACTAACGCGA 60.443 57.895 15.93 0.00 0.00 5.87
317 318 1.400990 CGGTTCCGAACTAACGCGAG 61.401 60.000 15.93 2.26 0.00 5.03
318 319 0.109597 GGTTCCGAACTAACGCGAGA 60.110 55.000 15.93 0.00 0.00 4.04
319 320 1.468736 GGTTCCGAACTAACGCGAGAT 60.469 52.381 15.93 0.13 0.00 2.75
321 322 3.429085 GTTCCGAACTAACGCGAGATAA 58.571 45.455 15.93 0.00 0.00 1.75
323 324 2.419673 TCCGAACTAACGCGAGATAACA 59.580 45.455 15.93 0.00 0.00 2.41
325 326 3.001365 CCGAACTAACGCGAGATAACAAC 60.001 47.826 15.93 0.00 0.00 3.32
326 327 3.605056 CGAACTAACGCGAGATAACAACA 59.395 43.478 15.93 0.00 0.00 3.33
327 328 4.258899 CGAACTAACGCGAGATAACAACAG 60.259 45.833 15.93 0.00 0.00 3.16
328 329 4.170292 ACTAACGCGAGATAACAACAGT 57.830 40.909 15.93 0.00 0.00 3.55
329 330 5.300969 ACTAACGCGAGATAACAACAGTA 57.699 39.130 15.93 0.00 0.00 2.74
331 332 6.327934 ACTAACGCGAGATAACAACAGTAAT 58.672 36.000 15.93 0.00 0.00 1.89
332 333 5.697848 AACGCGAGATAACAACAGTAATC 57.302 39.130 15.93 0.00 0.00 1.75
334 335 4.033019 CGCGAGATAACAACAGTAATCGA 58.967 43.478 0.00 0.00 0.00 3.59
335 336 4.497966 CGCGAGATAACAACAGTAATCGAA 59.502 41.667 0.00 0.00 0.00 3.71
336 337 5.330866 CGCGAGATAACAACAGTAATCGAAG 60.331 44.000 0.00 0.00 0.00 3.79
337 338 5.515626 GCGAGATAACAACAGTAATCGAAGT 59.484 40.000 0.00 0.00 0.00 3.01
340 341 7.253354 CGAGATAACAACAGTAATCGAAGTGAC 60.253 40.741 0.00 0.00 0.00 3.67
341 342 7.375834 AGATAACAACAGTAATCGAAGTGACA 58.624 34.615 0.00 0.00 0.00 3.58
342 343 8.035394 AGATAACAACAGTAATCGAAGTGACAT 58.965 33.333 0.00 0.00 0.00 3.06
344 345 4.152402 ACAACAGTAATCGAAGTGACATGC 59.848 41.667 0.00 0.00 0.00 4.06
345 346 3.262420 ACAGTAATCGAAGTGACATGCC 58.738 45.455 0.00 0.00 0.00 4.40
347 348 3.873361 CAGTAATCGAAGTGACATGCCAT 59.127 43.478 0.00 0.00 0.00 4.40
348 349 4.025396 CAGTAATCGAAGTGACATGCCATC 60.025 45.833 0.00 0.00 0.00 3.51
350 351 2.696989 TCGAAGTGACATGCCATCAT 57.303 45.000 0.00 0.00 0.00 2.45
351 352 2.989909 TCGAAGTGACATGCCATCATT 58.010 42.857 0.00 0.00 0.00 2.57
353 354 4.122046 TCGAAGTGACATGCCATCATTAG 58.878 43.478 0.00 0.00 0.00 1.73
354 355 3.303593 CGAAGTGACATGCCATCATTAGC 60.304 47.826 0.00 0.00 0.00 3.09
355 356 3.286329 AGTGACATGCCATCATTAGCA 57.714 42.857 0.00 0.00 44.45 3.49
356 357 3.211865 AGTGACATGCCATCATTAGCAG 58.788 45.455 0.00 0.00 43.38 4.24
358 359 3.250280 GTGACATGCCATCATTAGCAGAG 59.750 47.826 0.00 0.00 43.38 3.35
359 360 3.135167 TGACATGCCATCATTAGCAGAGA 59.865 43.478 0.00 0.00 43.38 3.10
360 361 4.132336 GACATGCCATCATTAGCAGAGAA 58.868 43.478 0.00 0.00 43.38 2.87
361 362 4.726583 ACATGCCATCATTAGCAGAGAAT 58.273 39.130 0.00 0.00 43.38 2.40
363 364 6.301486 ACATGCCATCATTAGCAGAGAATTA 58.699 36.000 0.00 0.00 43.38 1.40
364 365 6.206243 ACATGCCATCATTAGCAGAGAATTAC 59.794 38.462 0.00 0.00 43.38 1.89
365 366 5.933617 TGCCATCATTAGCAGAGAATTACT 58.066 37.500 0.00 0.00 33.08 2.24
366 367 5.761726 TGCCATCATTAGCAGAGAATTACTG 59.238 40.000 7.50 7.50 38.27 2.74
367 368 5.762218 GCCATCATTAGCAGAGAATTACTGT 59.238 40.000 11.87 0.00 37.64 3.55
368 369 6.931281 GCCATCATTAGCAGAGAATTACTGTA 59.069 38.462 11.87 0.00 37.64 2.74
370 371 7.117523 CCATCATTAGCAGAGAATTACTGTAGC 59.882 40.741 11.87 0.00 37.64 3.58
371 372 7.353414 TCATTAGCAGAGAATTACTGTAGCT 57.647 36.000 11.87 0.00 37.64 3.32
375 376 6.232581 AGCAGAGAATTACTGTAGCTCAAT 57.767 37.500 11.87 0.00 37.64 2.57
376 377 6.648192 AGCAGAGAATTACTGTAGCTCAATT 58.352 36.000 11.87 2.43 37.64 2.32
377 378 7.786030 AGCAGAGAATTACTGTAGCTCAATTA 58.214 34.615 11.87 0.00 37.64 1.40
379 380 8.707839 GCAGAGAATTACTGTAGCTCAATTATC 58.292 37.037 11.87 7.79 37.64 1.75
380 381 9.202273 CAGAGAATTACTGTAGCTCAATTATCC 57.798 37.037 13.29 0.00 31.93 2.59
381 382 8.085296 AGAGAATTACTGTAGCTCAATTATCCG 58.915 37.037 13.29 0.00 31.93 4.18
382 383 7.155328 AGAATTACTGTAGCTCAATTATCCGG 58.845 38.462 0.00 0.00 0.00 5.14
384 385 3.039011 ACTGTAGCTCAATTATCCGGGT 58.961 45.455 0.00 0.00 0.00 5.28
385 386 3.181465 ACTGTAGCTCAATTATCCGGGTG 60.181 47.826 0.00 0.00 0.00 4.61
386 387 2.769663 TGTAGCTCAATTATCCGGGTGT 59.230 45.455 0.00 0.00 0.00 4.16
389 390 1.940613 GCTCAATTATCCGGGTGTCAC 59.059 52.381 0.00 0.00 0.00 3.67
391 392 3.808728 CTCAATTATCCGGGTGTCACAT 58.191 45.455 0.00 0.00 0.00 3.21
392 393 4.199310 CTCAATTATCCGGGTGTCACATT 58.801 43.478 0.00 0.00 0.00 2.71
395 396 6.181190 TCAATTATCCGGGTGTCACATTTTA 58.819 36.000 0.00 0.00 0.00 1.52
396 397 6.317642 TCAATTATCCGGGTGTCACATTTTAG 59.682 38.462 0.00 0.00 0.00 1.85
397 398 3.713826 ATCCGGGTGTCACATTTTAGT 57.286 42.857 0.00 0.00 0.00 2.24
398 399 4.829872 ATCCGGGTGTCACATTTTAGTA 57.170 40.909 0.00 0.00 0.00 1.82
399 400 3.929094 TCCGGGTGTCACATTTTAGTAC 58.071 45.455 0.00 0.00 0.00 2.73
401 402 4.066490 CCGGGTGTCACATTTTAGTACAA 58.934 43.478 5.12 0.00 0.00 2.41
402 403 4.515944 CCGGGTGTCACATTTTAGTACAAA 59.484 41.667 5.12 0.00 0.00 2.83
404 405 5.237779 CGGGTGTCACATTTTAGTACAAAGT 59.762 40.000 5.12 0.00 0.00 2.66
405 406 6.238538 CGGGTGTCACATTTTAGTACAAAGTT 60.239 38.462 5.12 0.00 0.00 2.66
406 407 6.915843 GGGTGTCACATTTTAGTACAAAGTTG 59.084 38.462 5.12 0.00 0.00 3.16
407 408 7.415877 GGGTGTCACATTTTAGTACAAAGTTGT 60.416 37.037 5.12 1.75 44.86 3.32
408 409 8.614346 GGTGTCACATTTTAGTACAAAGTTGTA 58.386 33.333 5.12 0.00 42.35 2.41
421 422 6.663944 ACAAAGTTGTACTCAAGTTGAGAC 57.336 37.500 34.16 25.95 42.45 3.36
422 423 6.170506 ACAAAGTTGTACTCAAGTTGAGACA 58.829 36.000 34.16 27.73 42.45 3.41
423 424 6.092259 ACAAAGTTGTACTCAAGTTGAGACAC 59.908 38.462 34.16 28.09 42.45 3.67
424 425 8.008986 ACAAAGTTGTACTCAAGTTGAGACACT 61.009 37.037 34.16 24.49 42.45 3.55
434 435 7.873719 TCAAGTTGAGACACTTATTTTGGAA 57.126 32.000 0.08 0.00 35.10 3.53
435 436 7.703328 TCAAGTTGAGACACTTATTTTGGAAC 58.297 34.615 0.08 0.00 35.10 3.62
436 437 6.300354 AGTTGAGACACTTATTTTGGAACG 57.700 37.500 0.00 0.00 0.00 3.95
437 438 5.238650 AGTTGAGACACTTATTTTGGAACGG 59.761 40.000 0.00 0.00 0.00 4.44
438 439 4.963373 TGAGACACTTATTTTGGAACGGA 58.037 39.130 0.00 0.00 0.00 4.69
439 440 4.994852 TGAGACACTTATTTTGGAACGGAG 59.005 41.667 0.00 0.00 0.00 4.63
440 441 4.324267 AGACACTTATTTTGGAACGGAGG 58.676 43.478 0.00 0.00 0.00 4.30
442 443 3.181437 ACACTTATTTTGGAACGGAGGGT 60.181 43.478 0.00 0.00 0.00 4.34
443 444 3.190535 CACTTATTTTGGAACGGAGGGTG 59.809 47.826 0.00 0.00 0.00 4.61
449 450 0.682852 TGGAACGGAGGGTGTGTAAG 59.317 55.000 0.00 0.00 0.00 2.34
450 451 0.971386 GGAACGGAGGGTGTGTAAGA 59.029 55.000 0.00 0.00 0.00 2.10
453 454 3.259902 GAACGGAGGGTGTGTAAGAATC 58.740 50.000 0.00 0.00 0.00 2.52
454 455 2.253610 ACGGAGGGTGTGTAAGAATCA 58.746 47.619 0.00 0.00 0.00 2.57
455 456 2.838202 ACGGAGGGTGTGTAAGAATCAT 59.162 45.455 0.00 0.00 0.00 2.45
458 459 4.991056 CGGAGGGTGTGTAAGAATCATATG 59.009 45.833 0.00 0.00 0.00 1.78
459 460 5.221441 CGGAGGGTGTGTAAGAATCATATGA 60.221 44.000 8.10 8.10 0.00 2.15
460 461 6.591935 GGAGGGTGTGTAAGAATCATATGAA 58.408 40.000 9.99 0.00 0.00 2.57
461 462 6.483640 GGAGGGTGTGTAAGAATCATATGAAC 59.516 42.308 9.99 7.29 0.00 3.18
462 463 7.200434 AGGGTGTGTAAGAATCATATGAACT 57.800 36.000 9.99 9.48 0.00 3.01
463 464 7.050377 AGGGTGTGTAAGAATCATATGAACTG 58.950 38.462 9.99 0.00 0.00 3.16
464 465 7.047891 GGGTGTGTAAGAATCATATGAACTGA 58.952 38.462 9.99 3.08 0.00 3.41
465 466 7.552687 GGGTGTGTAAGAATCATATGAACTGAA 59.447 37.037 9.99 2.74 0.00 3.02
466 467 8.607459 GGTGTGTAAGAATCATATGAACTGAAG 58.393 37.037 9.99 0.00 0.00 3.02
467 468 9.155975 GTGTGTAAGAATCATATGAACTGAAGT 57.844 33.333 9.99 0.90 0.00 3.01
468 469 9.154847 TGTGTAAGAATCATATGAACTGAAGTG 57.845 33.333 9.99 0.00 0.00 3.16
469 470 9.371136 GTGTAAGAATCATATGAACTGAAGTGA 57.629 33.333 9.99 0.00 0.00 3.41
470 471 9.591792 TGTAAGAATCATATGAACTGAAGTGAG 57.408 33.333 9.99 0.00 0.00 3.51
471 472 9.809096 GTAAGAATCATATGAACTGAAGTGAGA 57.191 33.333 9.99 0.00 0.00 3.27
473 474 9.545105 AAGAATCATATGAACTGAAGTGAGATC 57.455 33.333 9.99 0.00 0.00 2.75
474 475 8.702819 AGAATCATATGAACTGAAGTGAGATCA 58.297 33.333 9.99 0.00 0.00 2.92
475 476 8.659925 AATCATATGAACTGAAGTGAGATCAC 57.340 34.615 9.99 4.77 46.77 3.06
488 489 4.830912 GTGAGATCACGCAGATTGAATTC 58.169 43.478 0.00 0.00 37.00 2.17
489 490 4.569966 GTGAGATCACGCAGATTGAATTCT 59.430 41.667 7.05 0.00 37.00 2.40
490 491 4.807834 TGAGATCACGCAGATTGAATTCTC 59.192 41.667 7.05 0.00 37.00 2.87
491 492 5.021033 AGATCACGCAGATTGAATTCTCT 57.979 39.130 7.05 0.00 37.00 3.10
492 493 5.049167 AGATCACGCAGATTGAATTCTCTC 58.951 41.667 7.05 3.57 37.00 3.20
493 494 3.182182 TCACGCAGATTGAATTCTCTCG 58.818 45.455 7.05 9.94 0.00 4.04
494 495 2.283617 CACGCAGATTGAATTCTCTCGG 59.716 50.000 7.05 5.48 0.00 4.63
496 497 2.793790 CGCAGATTGAATTCTCTCGGAG 59.206 50.000 7.05 0.00 0.00 4.63
497 498 3.736433 CGCAGATTGAATTCTCTCGGAGT 60.736 47.826 7.05 0.00 0.00 3.85
501 502 6.073873 GCAGATTGAATTCTCTCGGAGTAATG 60.074 42.308 7.05 0.00 0.00 1.90
505 506 7.596749 TTGAATTCTCTCGGAGTAATGTTTC 57.403 36.000 7.05 3.74 0.00 2.78
507 508 5.941555 ATTCTCTCGGAGTAATGTTTCCT 57.058 39.130 4.69 0.00 0.00 3.36
508 509 7.123697 TGAATTCTCTCGGAGTAATGTTTCCTA 59.876 37.037 7.05 0.00 0.00 2.94
509 510 6.452494 TTCTCTCGGAGTAATGTTTCCTAG 57.548 41.667 4.69 0.00 0.00 3.02
510 511 4.338682 TCTCTCGGAGTAATGTTTCCTAGC 59.661 45.833 4.69 0.00 0.00 3.42
512 513 4.098044 TCTCGGAGTAATGTTTCCTAGCTG 59.902 45.833 4.69 0.00 0.00 4.24
515 516 3.873952 GGAGTAATGTTTCCTAGCTGCTG 59.126 47.826 13.43 2.21 0.00 4.41
516 517 4.508662 GAGTAATGTTTCCTAGCTGCTGT 58.491 43.478 13.43 0.00 0.00 4.40
519 520 6.284459 AGTAATGTTTCCTAGCTGCTGTATC 58.716 40.000 13.43 0.00 0.00 2.24
521 522 4.392921 TGTTTCCTAGCTGCTGTATCTC 57.607 45.455 13.43 0.00 0.00 2.75
522 523 3.181486 TGTTTCCTAGCTGCTGTATCTCG 60.181 47.826 13.43 0.00 0.00 4.04
523 524 0.955178 TCCTAGCTGCTGTATCTCGC 59.045 55.000 13.43 0.00 0.00 5.03
524 525 0.958091 CCTAGCTGCTGTATCTCGCT 59.042 55.000 13.43 0.00 34.88 4.93
525 526 1.335780 CCTAGCTGCTGTATCTCGCTG 60.336 57.143 13.43 0.00 32.49 5.18
529 530 0.859882 CTGCTGTATCTCGCTGCATG 59.140 55.000 0.00 0.00 39.42 4.06
530 531 0.531311 TGCTGTATCTCGCTGCATGG 60.531 55.000 0.00 0.00 36.22 3.66
532 533 1.495878 CTGTATCTCGCTGCATGGTC 58.504 55.000 0.00 0.00 0.00 4.02
533 534 0.249031 TGTATCTCGCTGCATGGTCG 60.249 55.000 0.00 0.00 0.00 4.79
534 535 1.300156 TATCTCGCTGCATGGTCGC 60.300 57.895 0.00 0.00 0.00 5.19
535 536 2.699576 TATCTCGCTGCATGGTCGCC 62.700 60.000 0.00 0.00 0.00 5.54
539 540 3.643978 GCTGCATGGTCGCCGATC 61.644 66.667 0.00 0.00 0.00 3.69
540 541 2.969238 CTGCATGGTCGCCGATCC 60.969 66.667 0.00 0.00 0.00 3.36
542 543 4.891727 GCATGGTCGCCGATCCGT 62.892 66.667 0.00 0.00 0.00 4.69
543 544 2.202878 CATGGTCGCCGATCCGTT 60.203 61.111 0.00 0.00 0.00 4.44
544 545 2.202878 ATGGTCGCCGATCCGTTG 60.203 61.111 0.00 0.00 0.00 4.10
545 546 3.014085 ATGGTCGCCGATCCGTTGT 62.014 57.895 0.00 0.00 0.00 3.32
549 550 1.070038 GTCGCCGATCCGTTGTTTTA 58.930 50.000 0.00 0.00 0.00 1.52
550 551 1.460359 GTCGCCGATCCGTTGTTTTAA 59.540 47.619 0.00 0.00 0.00 1.52
551 552 1.727880 TCGCCGATCCGTTGTTTTAAG 59.272 47.619 0.00 0.00 0.00 1.85
552 553 1.201987 CGCCGATCCGTTGTTTTAAGG 60.202 52.381 0.00 0.00 0.00 2.69
553 554 1.466866 GCCGATCCGTTGTTTTAAGGC 60.467 52.381 0.00 0.00 35.00 4.35
554 555 1.131693 CCGATCCGTTGTTTTAAGGCC 59.868 52.381 0.00 0.00 0.00 5.19
555 556 1.131693 CGATCCGTTGTTTTAAGGCCC 59.868 52.381 0.00 0.00 0.00 5.80
556 557 2.164338 GATCCGTTGTTTTAAGGCCCA 58.836 47.619 0.00 0.00 0.00 5.36
557 558 2.068834 TCCGTTGTTTTAAGGCCCAA 57.931 45.000 0.00 0.00 0.00 4.12
558 559 2.385803 TCCGTTGTTTTAAGGCCCAAA 58.614 42.857 0.00 0.00 0.00 3.28
559 560 2.966516 TCCGTTGTTTTAAGGCCCAAAT 59.033 40.909 0.00 0.00 0.00 2.32
560 561 3.063485 CCGTTGTTTTAAGGCCCAAATG 58.937 45.455 0.00 0.00 0.00 2.32
561 562 2.478514 CGTTGTTTTAAGGCCCAAATGC 59.521 45.455 0.00 0.00 0.00 3.56
570 571 2.508361 GCCCAAATGCCTGCATAGT 58.492 52.632 4.84 0.00 35.31 2.12
571 572 0.386838 GCCCAAATGCCTGCATAGTC 59.613 55.000 4.84 0.00 35.31 2.59
572 573 1.035139 CCCAAATGCCTGCATAGTCC 58.965 55.000 4.84 0.00 35.31 3.85
573 574 1.410648 CCCAAATGCCTGCATAGTCCT 60.411 52.381 4.84 0.00 35.31 3.85
576 577 3.567164 CCAAATGCCTGCATAGTCCTAAG 59.433 47.826 4.84 0.00 35.31 2.18
577 578 2.557920 ATGCCTGCATAGTCCTAAGC 57.442 50.000 2.09 0.00 34.49 3.09
578 579 0.469917 TGCCTGCATAGTCCTAAGCC 59.530 55.000 0.00 0.00 0.00 4.35
579 580 0.250510 GCCTGCATAGTCCTAAGCCC 60.251 60.000 0.00 0.00 0.00 5.19
580 581 0.398318 CCTGCATAGTCCTAAGCCCC 59.602 60.000 0.00 0.00 0.00 5.80
581 582 1.131638 CTGCATAGTCCTAAGCCCCA 58.868 55.000 0.00 0.00 0.00 4.96
582 583 1.490490 CTGCATAGTCCTAAGCCCCAA 59.510 52.381 0.00 0.00 0.00 4.12
583 584 1.211949 TGCATAGTCCTAAGCCCCAAC 59.788 52.381 0.00 0.00 0.00 3.77
584 585 1.211949 GCATAGTCCTAAGCCCCAACA 59.788 52.381 0.00 0.00 0.00 3.33
586 587 3.279434 CATAGTCCTAAGCCCCAACAAC 58.721 50.000 0.00 0.00 0.00 3.32
587 588 1.446016 AGTCCTAAGCCCCAACAACT 58.554 50.000 0.00 0.00 0.00 3.16
588 589 1.073923 AGTCCTAAGCCCCAACAACTG 59.926 52.381 0.00 0.00 0.00 3.16
590 591 1.777878 TCCTAAGCCCCAACAACTGAA 59.222 47.619 0.00 0.00 0.00 3.02
591 592 2.378547 TCCTAAGCCCCAACAACTGAAT 59.621 45.455 0.00 0.00 0.00 2.57
592 593 2.755103 CCTAAGCCCCAACAACTGAATC 59.245 50.000 0.00 0.00 0.00 2.52
593 594 2.683211 AAGCCCCAACAACTGAATCT 57.317 45.000 0.00 0.00 0.00 2.40
594 595 1.915141 AGCCCCAACAACTGAATCTG 58.085 50.000 0.00 0.00 0.00 2.90
597 598 0.523072 CCCAACAACTGAATCTGCCG 59.477 55.000 0.00 0.00 0.00 5.69
598 599 1.522668 CCAACAACTGAATCTGCCGA 58.477 50.000 0.00 0.00 0.00 5.54
601 602 3.495193 CAACAACTGAATCTGCCGATTG 58.505 45.455 8.20 0.00 39.89 2.67
602 603 1.470098 ACAACTGAATCTGCCGATTGC 59.530 47.619 8.20 1.48 39.89 3.56
604 605 1.376543 ACTGAATCTGCCGATTGCTG 58.623 50.000 8.20 6.81 39.89 4.41
611 612 2.984562 TCTGCCGATTGCTGATTGTAA 58.015 42.857 0.00 0.00 42.28 2.41
614 615 3.081061 TGCCGATTGCTGATTGTAAAGT 58.919 40.909 0.00 0.00 42.00 2.66
616 617 4.697828 TGCCGATTGCTGATTGTAAAGTTA 59.302 37.500 0.00 0.00 42.00 2.24
619 620 7.228507 TGCCGATTGCTGATTGTAAAGTTATAT 59.771 33.333 0.00 0.00 42.00 0.86
620 621 7.535258 GCCGATTGCTGATTGTAAAGTTATATG 59.465 37.037 0.00 0.00 36.87 1.78
621 622 7.535258 CCGATTGCTGATTGTAAAGTTATATGC 59.465 37.037 0.00 0.00 0.00 3.14
622 623 8.285394 CGATTGCTGATTGTAAAGTTATATGCT 58.715 33.333 0.00 0.00 0.00 3.79
623 624 9.956720 GATTGCTGATTGTAAAGTTATATGCTT 57.043 29.630 0.00 0.00 0.00 3.91
632 633 9.613428 TTGTAAAGTTATATGCTTATGTGAGCT 57.387 29.630 2.46 0.00 43.11 4.09
633 634 9.613428 TGTAAAGTTATATGCTTATGTGAGCTT 57.387 29.630 2.46 0.00 43.11 3.74
636 637 8.737168 AAGTTATATGCTTATGTGAGCTTTCA 57.263 30.769 2.46 0.00 43.11 2.69
639 640 9.226345 GTTATATGCTTATGTGAGCTTTCAAAC 57.774 33.333 2.46 0.00 43.11 2.93
640 641 5.972107 ATGCTTATGTGAGCTTTCAAACT 57.028 34.783 0.00 0.00 43.11 2.66
641 642 8.737168 ATATGCTTATGTGAGCTTTCAAACTA 57.263 30.769 0.00 0.00 43.11 2.24
643 644 6.902341 TGCTTATGTGAGCTTTCAAACTAAG 58.098 36.000 0.00 0.00 43.11 2.18
644 645 5.797434 GCTTATGTGAGCTTTCAAACTAAGC 59.203 40.000 14.22 14.22 46.47 3.09
652 653 4.898370 GCTTTCAAACTAAGCGTCATAGG 58.102 43.478 0.00 0.00 38.68 2.57
654 655 5.106673 GCTTTCAAACTAAGCGTCATAGGTT 60.107 40.000 0.00 0.00 38.68 3.50
655 656 6.567891 GCTTTCAAACTAAGCGTCATAGGTTT 60.568 38.462 0.00 0.00 38.68 3.27
656 657 6.476243 TTCAAACTAAGCGTCATAGGTTTC 57.524 37.500 0.00 0.00 27.87 2.78
657 658 4.933400 TCAAACTAAGCGTCATAGGTTTCC 59.067 41.667 0.00 0.00 27.87 3.13
658 659 4.546829 AACTAAGCGTCATAGGTTTCCA 57.453 40.909 0.00 0.00 33.53 3.53
659 660 3.858247 ACTAAGCGTCATAGGTTTCCAC 58.142 45.455 0.00 0.00 33.53 4.02
660 661 3.514309 ACTAAGCGTCATAGGTTTCCACT 59.486 43.478 0.00 0.00 33.53 4.00
662 663 1.899814 AGCGTCATAGGTTTCCACTCA 59.100 47.619 0.00 0.00 0.00 3.41
663 664 2.501723 AGCGTCATAGGTTTCCACTCAT 59.498 45.455 0.00 0.00 0.00 2.90
664 665 3.704566 AGCGTCATAGGTTTCCACTCATA 59.295 43.478 0.00 0.00 0.00 2.15
665 666 3.802685 GCGTCATAGGTTTCCACTCATAC 59.197 47.826 0.00 0.00 0.00 2.39
666 667 4.679639 GCGTCATAGGTTTCCACTCATACA 60.680 45.833 0.00 0.00 0.00 2.29
667 668 5.043903 CGTCATAGGTTTCCACTCATACAG 58.956 45.833 0.00 0.00 0.00 2.74
668 669 5.163550 CGTCATAGGTTTCCACTCATACAGA 60.164 44.000 0.00 0.00 0.00 3.41
669 670 6.461648 CGTCATAGGTTTCCACTCATACAGAT 60.462 42.308 0.00 0.00 0.00 2.90
670 671 7.255486 CGTCATAGGTTTCCACTCATACAGATA 60.255 40.741 0.00 0.00 0.00 1.98
671 672 7.868415 GTCATAGGTTTCCACTCATACAGATAC 59.132 40.741 0.00 0.00 0.00 2.24
672 673 7.785028 TCATAGGTTTCCACTCATACAGATACT 59.215 37.037 0.00 0.00 0.00 2.12
673 674 9.078990 CATAGGTTTCCACTCATACAGATACTA 57.921 37.037 0.00 0.00 0.00 1.82
674 675 7.349412 AGGTTTCCACTCATACAGATACTAC 57.651 40.000 0.00 0.00 0.00 2.73
675 676 7.126733 AGGTTTCCACTCATACAGATACTACT 58.873 38.462 0.00 0.00 0.00 2.57
676 677 7.285858 AGGTTTCCACTCATACAGATACTACTC 59.714 40.741 0.00 0.00 0.00 2.59
678 679 7.809546 TTCCACTCATACAGATACTACTCTG 57.190 40.000 0.00 0.00 46.59 3.35
679 680 5.765677 TCCACTCATACAGATACTACTCTGC 59.234 44.000 1.14 0.00 45.37 4.26
681 682 5.767665 CACTCATACAGATACTACTCTGCCT 59.232 44.000 1.14 0.00 45.37 4.75
682 683 6.001460 ACTCATACAGATACTACTCTGCCTC 58.999 44.000 1.14 0.00 45.37 4.70
683 684 5.941788 TCATACAGATACTACTCTGCCTCA 58.058 41.667 1.14 0.00 45.37 3.86
684 685 6.000840 TCATACAGATACTACTCTGCCTCAG 58.999 44.000 1.14 0.00 45.37 3.35
695 696 3.784701 TCTGCCTCAGAGATTTCGTAC 57.215 47.619 0.00 0.00 35.39 3.67
696 697 3.089284 TCTGCCTCAGAGATTTCGTACA 58.911 45.455 0.00 0.00 35.39 2.90
698 699 3.849911 TGCCTCAGAGATTTCGTACAAG 58.150 45.455 0.00 0.00 0.00 3.16
700 701 3.614616 GCCTCAGAGATTTCGTACAAGTG 59.385 47.826 0.00 0.00 0.00 3.16
701 702 4.810790 CCTCAGAGATTTCGTACAAGTGT 58.189 43.478 0.00 0.00 0.00 3.55
702 703 5.621555 GCCTCAGAGATTTCGTACAAGTGTA 60.622 44.000 0.00 0.00 0.00 2.90
705 706 7.148289 CCTCAGAGATTTCGTACAAGTGTAGTA 60.148 40.741 0.00 0.00 0.00 1.82
706 707 7.749808 TCAGAGATTTCGTACAAGTGTAGTAG 58.250 38.462 0.00 0.00 0.00 2.57
707 708 6.967767 CAGAGATTTCGTACAAGTGTAGTAGG 59.032 42.308 0.00 0.00 0.00 3.18
708 709 6.883217 AGAGATTTCGTACAAGTGTAGTAGGA 59.117 38.462 0.00 0.00 35.34 2.94
709 710 7.556996 AGAGATTTCGTACAAGTGTAGTAGGAT 59.443 37.037 0.00 0.00 36.57 3.24
710 711 8.064336 AGATTTCGTACAAGTGTAGTAGGATT 57.936 34.615 0.00 0.00 36.57 3.01
714 715 9.577110 TTTCGTACAAGTGTAGTAGGATTATTG 57.423 33.333 0.00 0.00 36.57 1.90
715 716 8.510243 TCGTACAAGTGTAGTAGGATTATTGA 57.490 34.615 0.00 0.00 33.08 2.57
717 718 7.861372 CGTACAAGTGTAGTAGGATTATTGAGG 59.139 40.741 0.00 0.00 31.00 3.86
718 719 7.125792 ACAAGTGTAGTAGGATTATTGAGGG 57.874 40.000 0.00 0.00 0.00 4.30
720 721 7.402071 ACAAGTGTAGTAGGATTATTGAGGGAA 59.598 37.037 0.00 0.00 0.00 3.97
721 722 7.604657 AGTGTAGTAGGATTATTGAGGGAAG 57.395 40.000 0.00 0.00 0.00 3.46
722 723 6.555360 AGTGTAGTAGGATTATTGAGGGAAGG 59.445 42.308 0.00 0.00 0.00 3.46
723 724 6.326843 GTGTAGTAGGATTATTGAGGGAAGGT 59.673 42.308 0.00 0.00 0.00 3.50
724 725 6.906901 TGTAGTAGGATTATTGAGGGAAGGTT 59.093 38.462 0.00 0.00 0.00 3.50
725 726 8.069356 TGTAGTAGGATTATTGAGGGAAGGTTA 58.931 37.037 0.00 0.00 0.00 2.85
726 727 7.376335 AGTAGGATTATTGAGGGAAGGTTAC 57.624 40.000 0.00 0.00 0.00 2.50
727 728 5.291905 AGGATTATTGAGGGAAGGTTACG 57.708 43.478 0.00 0.00 0.00 3.18
728 729 4.720273 AGGATTATTGAGGGAAGGTTACGT 59.280 41.667 0.00 0.00 0.00 3.57
729 730 5.901276 AGGATTATTGAGGGAAGGTTACGTA 59.099 40.000 0.00 0.00 0.00 3.57
730 731 6.384886 AGGATTATTGAGGGAAGGTTACGTAA 59.615 38.462 3.29 3.29 0.00 3.18
731 732 7.049754 GGATTATTGAGGGAAGGTTACGTAAA 58.950 38.462 10.11 0.00 0.00 2.01
732 733 7.553760 GGATTATTGAGGGAAGGTTACGTAAAA 59.446 37.037 10.11 0.00 0.00 1.52
733 734 7.671495 TTATTGAGGGAAGGTTACGTAAAAC 57.329 36.000 10.11 6.38 0.00 2.43
736 737 5.058490 TGAGGGAAGGTTACGTAAAACTTG 58.942 41.667 23.39 0.00 45.37 3.16
737 738 5.163322 TGAGGGAAGGTTACGTAAAACTTGA 60.163 40.000 23.39 6.68 45.37 3.02
739 740 4.084380 GGGAAGGTTACGTAAAACTTGACG 60.084 45.833 23.39 0.00 45.37 4.35
740 741 4.507756 GGAAGGTTACGTAAAACTTGACGT 59.492 41.667 23.39 9.80 45.37 4.34
747 748 4.720530 CGTAAAACTTGACGTAAGCCTT 57.279 40.909 0.00 0.00 40.16 4.35
752 753 6.628919 AAAACTTGACGTAAGCCTTTGTAT 57.371 33.333 0.00 0.00 40.16 2.29
753 754 7.733402 AAAACTTGACGTAAGCCTTTGTATA 57.267 32.000 0.00 0.00 40.16 1.47
755 756 6.963049 ACTTGACGTAAGCCTTTGTATAAG 57.037 37.500 0.00 0.00 40.16 1.73
756 757 6.461640 ACTTGACGTAAGCCTTTGTATAAGT 58.538 36.000 0.00 0.00 40.16 2.24
757 758 6.367969 ACTTGACGTAAGCCTTTGTATAAGTG 59.632 38.462 0.00 0.00 40.16 3.16
758 759 5.786311 TGACGTAAGCCTTTGTATAAGTGT 58.214 37.500 0.00 0.00 45.62 3.55
759 760 6.923012 TGACGTAAGCCTTTGTATAAGTGTA 58.077 36.000 0.00 0.00 45.62 2.90
760 761 7.031372 TGACGTAAGCCTTTGTATAAGTGTAG 58.969 38.462 0.00 0.00 45.62 2.74
761 762 6.335777 ACGTAAGCCTTTGTATAAGTGTAGG 58.664 40.000 0.00 0.00 45.62 3.18
762 763 6.153340 ACGTAAGCCTTTGTATAAGTGTAGGA 59.847 38.462 0.00 0.00 45.62 2.94
763 764 7.147776 ACGTAAGCCTTTGTATAAGTGTAGGAT 60.148 37.037 0.00 0.00 45.62 3.24
766 767 8.959705 AAGCCTTTGTATAAGTGTAGGATTAC 57.040 34.615 0.00 0.00 30.32 1.89
767 768 8.320338 AGCCTTTGTATAAGTGTAGGATTACT 57.680 34.615 0.00 0.00 0.00 2.24
768 769 8.204836 AGCCTTTGTATAAGTGTAGGATTACTG 58.795 37.037 0.00 0.00 0.00 2.74
770 771 8.701895 CCTTTGTATAAGTGTAGGATTACTGGA 58.298 37.037 0.00 0.00 0.00 3.86
821 822 0.670162 TGCTTTGTCTGCAGGCTTTC 59.330 50.000 20.86 6.68 35.31 2.62
834 842 3.482786 CAGGCTTTCGACGAGATTTTTG 58.517 45.455 0.00 0.00 0.00 2.44
841 849 1.654105 CGACGAGATTTTTGGACGAGG 59.346 52.381 0.00 0.00 0.00 4.63
872 880 1.207593 GCATGCACCTCGTGTTGTC 59.792 57.895 14.21 0.00 35.75 3.18
920 9083 5.415221 CAGCAGGAGCCTATATAAACTAGC 58.585 45.833 0.00 0.00 43.56 3.42
936 9101 0.966179 TAGCAGCTCGAACCAACAGA 59.034 50.000 0.00 0.00 0.00 3.41
975 9156 0.033781 CAGAGCAGGGCTAGCTGATC 59.966 60.000 15.72 14.07 43.58 2.92
1278 13245 0.660595 CGATCCGCATAGTCGACACC 60.661 60.000 19.50 1.56 37.55 4.16
1291 13258 0.389391 CGACACCTCCAATATCGGCT 59.611 55.000 0.00 0.00 0.00 5.52
1449 13431 1.187974 CAGAAAAGCATGCATGGGGA 58.812 50.000 27.34 0.00 0.00 4.81
1467 13449 0.985549 GACAGTCGATCGTTCAGCAC 59.014 55.000 15.94 4.55 0.00 4.40
1468 13450 0.598562 ACAGTCGATCGTTCAGCACT 59.401 50.000 15.94 7.05 0.00 4.40
1469 13451 1.000163 ACAGTCGATCGTTCAGCACTT 60.000 47.619 15.94 0.00 0.00 3.16
1470 13452 1.651138 CAGTCGATCGTTCAGCACTTC 59.349 52.381 15.94 0.00 0.00 3.01
1471 13453 1.269723 AGTCGATCGTTCAGCACTTCA 59.730 47.619 15.94 0.00 0.00 3.02
1472 13454 1.651138 GTCGATCGTTCAGCACTTCAG 59.349 52.381 15.94 0.00 0.00 3.02
1473 13455 0.368227 CGATCGTTCAGCACTTCAGC 59.632 55.000 7.03 0.00 0.00 4.26
1492 13492 3.037431 GCTCCAGCTCATGACGATATT 57.963 47.619 0.00 0.00 38.21 1.28
1504 13504 4.379339 TGACGATATTGATGTTCACGGA 57.621 40.909 0.00 0.00 0.00 4.69
1515 13523 4.391830 TGATGTTCACGGAGTATTTGCTTC 59.608 41.667 0.00 0.00 41.61 3.86
1588 13599 1.795872 TGTGTCAGCGTCGTTTATTGG 59.204 47.619 0.00 0.00 0.00 3.16
1616 13627 0.099082 CCGTCTACGAGGCAGAAGTC 59.901 60.000 3.65 0.00 43.02 3.01
1727 13782 5.821204 AGTTTGTAATTGTGCAAGTCAGAC 58.179 37.500 0.00 0.00 30.51 3.51
1745 13800 5.827797 GTCAGACTAAGGTGATCTCATCTCT 59.172 44.000 0.00 0.00 36.03 3.10
1754 13814 2.517553 TGATCTCATCTCTCTGTCCCCT 59.482 50.000 0.00 0.00 0.00 4.79
1755 13815 3.724209 TGATCTCATCTCTCTGTCCCCTA 59.276 47.826 0.00 0.00 0.00 3.53
1756 13816 4.356492 TGATCTCATCTCTCTGTCCCCTAT 59.644 45.833 0.00 0.00 0.00 2.57
1757 13817 4.111255 TCTCATCTCTCTGTCCCCTATG 57.889 50.000 0.00 0.00 0.00 2.23
1758 13818 3.724209 TCTCATCTCTCTGTCCCCTATGA 59.276 47.826 0.00 0.00 0.00 2.15
1759 13819 4.081406 CTCATCTCTCTGTCCCCTATGAG 58.919 52.174 0.00 0.00 34.69 2.90
1760 13820 3.164268 CATCTCTCTGTCCCCTATGAGG 58.836 54.545 0.00 0.00 34.30 3.86
1761 13821 1.133325 TCTCTCTGTCCCCTATGAGGC 60.133 57.143 0.00 0.00 32.73 4.70
1784 13844 0.394565 GAGCACTGCATACCTAGGGG 59.605 60.000 14.81 3.21 38.88 4.79
1791 13851 1.352083 GCATACCTAGGGGCATCTCA 58.648 55.000 14.81 0.00 35.63 3.27
1907 13993 0.804989 CAAATTCCCGCAGACCAGAC 59.195 55.000 0.00 0.00 0.00 3.51
1969 14072 0.391661 TGACGCAGAAGGGCTTCATC 60.392 55.000 0.00 0.00 41.84 2.92
1984 14087 4.442706 GCTTCATCGACAATAAGGAGGAA 58.557 43.478 0.00 0.00 0.00 3.36
1988 14091 3.247006 TCGACAATAAGGAGGAAGCAC 57.753 47.619 0.00 0.00 0.00 4.40
1997 14100 1.072331 AGGAGGAAGCACGTGTCAATT 59.928 47.619 18.38 7.26 0.00 2.32
2044 14147 1.734465 GCGGAGAGGTTTGACATCTTG 59.266 52.381 0.00 0.00 39.60 3.02
2098 14203 5.617751 CGGAAATCAAAAGACAAAGCTCGAT 60.618 40.000 0.00 0.00 0.00 3.59
2112 14220 4.213564 AGCTCGATGAAAAGAAGACCAT 57.786 40.909 0.00 0.00 0.00 3.55
2117 14225 3.686241 CGATGAAAAGAAGACCATGCTCA 59.314 43.478 0.00 0.00 0.00 4.26
2139 14249 3.394836 GAGGAGGGTTGAGCCGCT 61.395 66.667 0.00 0.00 38.44 5.52
2191 14302 5.300969 CATCAACATGGACGAGTTTGATT 57.699 39.130 0.00 0.00 0.00 2.57
2194 14305 5.757886 TCAACATGGACGAGTTTGATTTTC 58.242 37.500 0.00 0.00 0.00 2.29
2235 14346 1.393883 GCCGTCCTCGAAAAGATGTTC 59.606 52.381 0.00 0.00 39.71 3.18
2244 14355 5.095691 TCGAAAAGATGTTCAAGCACTTC 57.904 39.130 0.00 0.00 0.00 3.01
2245 14356 4.816385 TCGAAAAGATGTTCAAGCACTTCT 59.184 37.500 0.00 0.00 33.65 2.85
2248 14360 6.567321 CGAAAAGATGTTCAAGCACTTCTGAT 60.567 38.462 0.00 0.00 32.82 2.90
2286 14407 1.445238 GAGCCAGCGACAGAGTGAC 60.445 63.158 0.00 0.00 0.00 3.67
2334 14455 3.242867 TGGGTGGGCAAAATTTACATGA 58.757 40.909 0.00 0.00 0.00 3.07
2352 14473 6.194796 ACATGAACCGGAACTTTTATGATG 57.805 37.500 9.46 2.26 0.00 3.07
2386 14507 8.775527 TGTAAAAGCTAATGAACATTCGTTGTA 58.224 29.630 8.96 0.00 37.68 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 8.997621 TGTGAGTATGGACTAAGTTGAAATAC 57.002 34.615 0.00 0.00 35.45 1.89
45 46 8.918202 TTTGTGAGTATGGACTAAGTTGAAAT 57.082 30.769 0.00 0.00 35.45 2.17
46 47 8.740123 TTTTGTGAGTATGGACTAAGTTGAAA 57.260 30.769 0.00 0.00 35.45 2.69
47 48 8.740123 TTTTTGTGAGTATGGACTAAGTTGAA 57.260 30.769 0.00 0.00 35.45 2.69
48 49 7.990886 ACTTTTTGTGAGTATGGACTAAGTTGA 59.009 33.333 0.00 0.00 35.45 3.18
49 50 8.154649 ACTTTTTGTGAGTATGGACTAAGTTG 57.845 34.615 0.00 0.00 35.45 3.16
57 58 9.832445 GAGGATTATACTTTTTGTGAGTATGGA 57.168 33.333 6.96 0.00 39.83 3.41
58 59 9.613428 TGAGGATTATACTTTTTGTGAGTATGG 57.387 33.333 6.96 0.00 39.83 2.74
170 171 9.435688 GAGAAACCATGCCTTTATAAATTGTTT 57.564 29.630 0.00 0.00 0.00 2.83
171 172 8.040727 GGAGAAACCATGCCTTTATAAATTGTT 58.959 33.333 0.00 0.00 38.79 2.83
172 173 7.180051 TGGAGAAACCATGCCTTTATAAATTGT 59.820 33.333 0.00 0.00 44.64 2.71
173 174 7.555087 TGGAGAAACCATGCCTTTATAAATTG 58.445 34.615 0.00 0.00 44.64 2.32
174 175 7.732222 TGGAGAAACCATGCCTTTATAAATT 57.268 32.000 0.00 0.00 44.64 1.82
189 190 6.206829 GCATAGGTAATTATGGTGGAGAAACC 59.793 42.308 0.00 0.00 40.94 3.27
191 192 6.905736 TGCATAGGTAATTATGGTGGAGAAA 58.094 36.000 0.00 0.00 32.77 2.52
192 193 6.508030 TGCATAGGTAATTATGGTGGAGAA 57.492 37.500 0.00 0.00 32.77 2.87
193 194 6.508030 TTGCATAGGTAATTATGGTGGAGA 57.492 37.500 0.00 0.00 32.77 3.71
194 195 9.466497 AATATTGCATAGGTAATTATGGTGGAG 57.534 33.333 0.00 0.00 32.77 3.86
195 196 9.821240 AAATATTGCATAGGTAATTATGGTGGA 57.179 29.630 0.00 0.00 32.77 4.02
197 198 9.773328 CGAAATATTGCATAGGTAATTATGGTG 57.227 33.333 0.00 0.00 32.77 4.17
198 199 9.515226 ACGAAATATTGCATAGGTAATTATGGT 57.485 29.630 0.00 0.00 32.77 3.55
204 205 8.677148 AGTGAACGAAATATTGCATAGGTAAT 57.323 30.769 0.00 0.00 33.67 1.89
205 206 7.225931 GGAGTGAACGAAATATTGCATAGGTAA 59.774 37.037 0.00 0.00 0.00 2.85
207 208 5.527582 GGAGTGAACGAAATATTGCATAGGT 59.472 40.000 0.00 0.00 0.00 3.08
208 209 5.333339 CGGAGTGAACGAAATATTGCATAGG 60.333 44.000 0.00 0.00 0.00 2.57
209 210 5.462068 TCGGAGTGAACGAAATATTGCATAG 59.538 40.000 0.00 0.00 37.42 2.23
210 211 5.353111 TCGGAGTGAACGAAATATTGCATA 58.647 37.500 0.00 0.00 37.42 3.14
211 212 4.188462 TCGGAGTGAACGAAATATTGCAT 58.812 39.130 0.00 0.00 37.42 3.96
212 213 3.591023 TCGGAGTGAACGAAATATTGCA 58.409 40.909 0.00 0.00 37.42 4.08
213 214 4.593597 TTCGGAGTGAACGAAATATTGC 57.406 40.909 0.00 0.00 46.03 3.56
224 225 5.828299 AAACTGAAAATGTTCGGAGTGAA 57.172 34.783 11.62 0.00 41.99 3.18
225 226 5.828299 AAAACTGAAAATGTTCGGAGTGA 57.172 34.783 11.62 0.00 41.99 3.41
226 227 9.113876 GTATTAAAACTGAAAATGTTCGGAGTG 57.886 33.333 11.62 0.00 41.99 3.51
227 228 9.063615 AGTATTAAAACTGAAAATGTTCGGAGT 57.936 29.630 11.62 0.00 41.99 3.85
228 229 9.893305 AAGTATTAAAACTGAAAATGTTCGGAG 57.107 29.630 11.62 0.00 41.99 4.63
230 231 9.672086 TCAAGTATTAAAACTGAAAATGTTCGG 57.328 29.630 2.65 2.65 44.53 4.30
278 279 8.555361 GGAACCGATTCAAATTCAAATTCAAAA 58.445 29.630 0.00 0.00 36.46 2.44
279 280 7.095857 CGGAACCGATTCAAATTCAAATTCAAA 60.096 33.333 7.53 0.00 42.83 2.69
280 281 6.364706 CGGAACCGATTCAAATTCAAATTCAA 59.635 34.615 7.53 0.00 42.83 2.69
281 282 5.861251 CGGAACCGATTCAAATTCAAATTCA 59.139 36.000 7.53 0.00 42.83 2.57
282 283 6.090129 TCGGAACCGATTCAAATTCAAATTC 58.910 36.000 12.04 0.00 44.01 2.17
283 284 6.019779 TCGGAACCGATTCAAATTCAAATT 57.980 33.333 12.04 0.00 44.01 1.82
284 285 5.637006 TCGGAACCGATTCAAATTCAAAT 57.363 34.783 12.04 0.00 44.01 2.32
298 299 1.400990 CTCGCGTTAGTTCGGAACCG 61.401 60.000 16.84 14.05 41.35 4.44
299 300 0.109597 TCTCGCGTTAGTTCGGAACC 60.110 55.000 16.84 1.71 0.00 3.62
302 303 2.419673 TGTTATCTCGCGTTAGTTCGGA 59.580 45.455 5.77 0.00 0.00 4.55
303 304 2.789208 TGTTATCTCGCGTTAGTTCGG 58.211 47.619 5.77 0.00 0.00 4.30
304 305 3.605056 TGTTGTTATCTCGCGTTAGTTCG 59.395 43.478 5.77 0.00 0.00 3.95
305 306 4.620184 ACTGTTGTTATCTCGCGTTAGTTC 59.380 41.667 5.77 0.00 0.00 3.01
307 308 4.170292 ACTGTTGTTATCTCGCGTTAGT 57.830 40.909 5.77 0.00 0.00 2.24
308 309 6.344002 CGATTACTGTTGTTATCTCGCGTTAG 60.344 42.308 5.77 0.00 32.03 2.34
310 311 4.264614 CGATTACTGTTGTTATCTCGCGTT 59.735 41.667 5.77 0.00 32.03 4.84
311 312 3.789756 CGATTACTGTTGTTATCTCGCGT 59.210 43.478 5.77 0.00 32.03 6.01
312 313 4.033019 TCGATTACTGTTGTTATCTCGCG 58.967 43.478 0.00 0.00 32.03 5.87
316 317 7.375834 TGTCACTTCGATTACTGTTGTTATCT 58.624 34.615 0.00 0.00 32.03 1.98
317 318 7.576750 TGTCACTTCGATTACTGTTGTTATC 57.423 36.000 0.00 0.00 0.00 1.75
318 319 7.413000 GCATGTCACTTCGATTACTGTTGTTAT 60.413 37.037 0.00 0.00 0.00 1.89
319 320 6.128661 GCATGTCACTTCGATTACTGTTGTTA 60.129 38.462 0.00 0.00 0.00 2.41
321 322 4.152402 GCATGTCACTTCGATTACTGTTGT 59.848 41.667 0.00 0.00 0.00 3.32
323 324 3.684788 GGCATGTCACTTCGATTACTGTT 59.315 43.478 0.00 0.00 0.00 3.16
325 326 3.261580 TGGCATGTCACTTCGATTACTG 58.738 45.455 0.00 0.00 0.00 2.74
326 327 3.610040 TGGCATGTCACTTCGATTACT 57.390 42.857 0.00 0.00 0.00 2.24
327 328 3.871006 TGATGGCATGTCACTTCGATTAC 59.129 43.478 3.81 0.00 0.00 1.89
328 329 4.135747 TGATGGCATGTCACTTCGATTA 57.864 40.909 3.81 0.00 0.00 1.75
329 330 2.989909 TGATGGCATGTCACTTCGATT 58.010 42.857 3.81 0.00 0.00 3.34
331 332 2.696989 ATGATGGCATGTCACTTCGA 57.303 45.000 3.81 0.00 32.31 3.71
332 333 3.303593 GCTAATGATGGCATGTCACTTCG 60.304 47.826 3.81 0.00 34.26 3.79
334 335 3.623703 TGCTAATGATGGCATGTCACTT 58.376 40.909 3.81 0.00 38.22 3.16
335 336 3.118149 TCTGCTAATGATGGCATGTCACT 60.118 43.478 3.81 0.00 42.60 3.41
336 337 3.208594 TCTGCTAATGATGGCATGTCAC 58.791 45.455 3.81 0.00 42.60 3.67
337 338 3.135167 TCTCTGCTAATGATGGCATGTCA 59.865 43.478 3.81 0.60 42.60 3.58
340 341 5.707242 AATTCTCTGCTAATGATGGCATG 57.293 39.130 3.81 0.00 42.60 4.06
341 342 6.430308 CAGTAATTCTCTGCTAATGATGGCAT 59.570 38.462 0.00 0.00 42.60 4.40
342 343 5.761726 CAGTAATTCTCTGCTAATGATGGCA 59.238 40.000 0.00 0.00 41.17 4.92
344 345 7.117523 GCTACAGTAATTCTCTGCTAATGATGG 59.882 40.741 9.54 0.00 36.50 3.51
345 346 7.871973 AGCTACAGTAATTCTCTGCTAATGATG 59.128 37.037 9.54 0.00 36.50 3.07
347 348 7.068716 TGAGCTACAGTAATTCTCTGCTAATGA 59.931 37.037 9.54 0.00 36.50 2.57
348 349 7.205992 TGAGCTACAGTAATTCTCTGCTAATG 58.794 38.462 9.54 0.00 36.50 1.90
350 351 6.775594 TGAGCTACAGTAATTCTCTGCTAA 57.224 37.500 9.54 0.00 36.50 3.09
351 352 6.775594 TTGAGCTACAGTAATTCTCTGCTA 57.224 37.500 9.54 3.30 36.50 3.49
353 354 6.917217 AATTGAGCTACAGTAATTCTCTGC 57.083 37.500 9.54 0.00 36.50 4.26
354 355 9.202273 GGATAATTGAGCTACAGTAATTCTCTG 57.798 37.037 8.43 8.43 38.68 3.35
355 356 8.085296 CGGATAATTGAGCTACAGTAATTCTCT 58.915 37.037 0.00 0.00 0.00 3.10
356 357 7.329717 CCGGATAATTGAGCTACAGTAATTCTC 59.670 40.741 0.00 0.00 0.00 2.87
358 359 6.369065 CCCGGATAATTGAGCTACAGTAATTC 59.631 42.308 0.73 0.00 0.00 2.17
359 360 6.183361 ACCCGGATAATTGAGCTACAGTAATT 60.183 38.462 0.73 0.00 0.00 1.40
360 361 5.307196 ACCCGGATAATTGAGCTACAGTAAT 59.693 40.000 0.73 0.00 0.00 1.89
361 362 4.652421 ACCCGGATAATTGAGCTACAGTAA 59.348 41.667 0.73 0.00 0.00 2.24
363 364 3.039011 ACCCGGATAATTGAGCTACAGT 58.961 45.455 0.73 0.00 0.00 3.55
364 365 3.181465 ACACCCGGATAATTGAGCTACAG 60.181 47.826 0.73 0.00 0.00 2.74
365 366 2.769663 ACACCCGGATAATTGAGCTACA 59.230 45.455 0.73 0.00 0.00 2.74
366 367 3.181469 TGACACCCGGATAATTGAGCTAC 60.181 47.826 0.73 0.00 0.00 3.58
367 368 3.035363 TGACACCCGGATAATTGAGCTA 58.965 45.455 0.73 0.00 0.00 3.32
368 369 1.837439 TGACACCCGGATAATTGAGCT 59.163 47.619 0.73 0.00 0.00 4.09
370 371 3.260475 TGTGACACCCGGATAATTGAG 57.740 47.619 0.73 0.00 0.00 3.02
371 372 3.924114 ATGTGACACCCGGATAATTGA 57.076 42.857 0.73 0.00 0.00 2.57
375 376 5.168647 ACTAAAATGTGACACCCGGATAA 57.831 39.130 0.73 0.00 0.00 1.75
376 377 4.829872 ACTAAAATGTGACACCCGGATA 57.170 40.909 0.73 0.00 0.00 2.59
377 378 3.713826 ACTAAAATGTGACACCCGGAT 57.286 42.857 0.73 0.00 0.00 4.18
379 380 3.666274 TGTACTAAAATGTGACACCCGG 58.334 45.455 2.45 0.00 0.00 5.73
380 381 5.237779 ACTTTGTACTAAAATGTGACACCCG 59.762 40.000 2.45 0.00 0.00 5.28
381 382 6.628919 ACTTTGTACTAAAATGTGACACCC 57.371 37.500 2.45 0.00 0.00 4.61
382 383 7.477494 ACAACTTTGTACTAAAATGTGACACC 58.523 34.615 2.45 0.00 40.16 4.16
397 398 7.277098 GTGTCTCAACTTGAGTACAACTTTGTA 59.723 37.037 16.75 0.00 44.58 2.41
398 399 6.092259 GTGTCTCAACTTGAGTACAACTTTGT 59.908 38.462 16.75 0.00 44.58 2.83
399 400 6.313905 AGTGTCTCAACTTGAGTACAACTTTG 59.686 38.462 16.75 0.00 44.58 2.77
401 402 5.978814 AGTGTCTCAACTTGAGTACAACTT 58.021 37.500 16.75 7.90 44.58 2.66
402 403 5.599999 AGTGTCTCAACTTGAGTACAACT 57.400 39.130 16.75 12.91 44.58 3.16
404 405 8.958119 AAATAAGTGTCTCAACTTGAGTACAA 57.042 30.769 16.75 10.59 44.58 2.41
405 406 8.826710 CAAAATAAGTGTCTCAACTTGAGTACA 58.173 33.333 16.75 15.64 44.58 2.90
406 407 8.283291 CCAAAATAAGTGTCTCAACTTGAGTAC 58.717 37.037 16.75 15.91 44.58 2.73
407 408 8.208224 TCCAAAATAAGTGTCTCAACTTGAGTA 58.792 33.333 16.75 6.55 44.58 2.59
408 409 7.054124 TCCAAAATAAGTGTCTCAACTTGAGT 58.946 34.615 16.75 2.11 44.58 3.41
409 410 7.496529 TCCAAAATAAGTGTCTCAACTTGAG 57.503 36.000 12.02 12.02 45.59 3.02
411 412 6.632834 CGTTCCAAAATAAGTGTCTCAACTTG 59.367 38.462 0.00 0.00 40.58 3.16
412 413 6.238648 CCGTTCCAAAATAAGTGTCTCAACTT 60.239 38.462 0.00 0.00 42.89 2.66
414 415 5.237779 TCCGTTCCAAAATAAGTGTCTCAAC 59.762 40.000 0.00 0.00 0.00 3.18
415 416 5.369833 TCCGTTCCAAAATAAGTGTCTCAA 58.630 37.500 0.00 0.00 0.00 3.02
416 417 4.963373 TCCGTTCCAAAATAAGTGTCTCA 58.037 39.130 0.00 0.00 0.00 3.27
418 419 4.324267 CCTCCGTTCCAAAATAAGTGTCT 58.676 43.478 0.00 0.00 0.00 3.41
419 420 3.439129 CCCTCCGTTCCAAAATAAGTGTC 59.561 47.826 0.00 0.00 0.00 3.67
421 422 3.190535 CACCCTCCGTTCCAAAATAAGTG 59.809 47.826 0.00 0.00 0.00 3.16
422 423 3.181437 ACACCCTCCGTTCCAAAATAAGT 60.181 43.478 0.00 0.00 0.00 2.24
423 424 3.190535 CACACCCTCCGTTCCAAAATAAG 59.809 47.826 0.00 0.00 0.00 1.73
424 425 3.150767 CACACCCTCCGTTCCAAAATAA 58.849 45.455 0.00 0.00 0.00 1.40
425 426 2.106857 ACACACCCTCCGTTCCAAAATA 59.893 45.455 0.00 0.00 0.00 1.40
426 427 1.133606 ACACACCCTCCGTTCCAAAAT 60.134 47.619 0.00 0.00 0.00 1.82
427 428 0.256464 ACACACCCTCCGTTCCAAAA 59.744 50.000 0.00 0.00 0.00 2.44
430 431 0.682852 CTTACACACCCTCCGTTCCA 59.317 55.000 0.00 0.00 0.00 3.53
432 433 2.825861 TTCTTACACACCCTCCGTTC 57.174 50.000 0.00 0.00 0.00 3.95
433 434 2.635915 TGATTCTTACACACCCTCCGTT 59.364 45.455 0.00 0.00 0.00 4.44
434 435 2.253610 TGATTCTTACACACCCTCCGT 58.746 47.619 0.00 0.00 0.00 4.69
435 436 3.543680 ATGATTCTTACACACCCTCCG 57.456 47.619 0.00 0.00 0.00 4.63
436 437 6.174720 TCATATGATTCTTACACACCCTCC 57.825 41.667 0.00 0.00 0.00 4.30
437 438 7.225538 CAGTTCATATGATTCTTACACACCCTC 59.774 40.741 6.17 0.00 0.00 4.30
438 439 7.050377 CAGTTCATATGATTCTTACACACCCT 58.950 38.462 6.17 0.00 0.00 4.34
439 440 7.047891 TCAGTTCATATGATTCTTACACACCC 58.952 38.462 6.17 0.00 0.00 4.61
440 441 8.492673 TTCAGTTCATATGATTCTTACACACC 57.507 34.615 6.17 0.00 0.00 4.16
442 443 9.154847 CACTTCAGTTCATATGATTCTTACACA 57.845 33.333 6.17 0.00 0.00 3.72
443 444 9.371136 TCACTTCAGTTCATATGATTCTTACAC 57.629 33.333 6.17 0.00 0.00 2.90
449 450 8.763356 GTGATCTCACTTCAGTTCATATGATTC 58.237 37.037 6.17 3.43 43.25 2.52
450 451 7.437565 CGTGATCTCACTTCAGTTCATATGATT 59.562 37.037 6.17 0.00 44.34 2.57
453 454 5.051173 GCGTGATCTCACTTCAGTTCATATG 60.051 44.000 8.57 0.00 44.34 1.78
454 455 5.046529 GCGTGATCTCACTTCAGTTCATAT 58.953 41.667 8.57 0.00 44.34 1.78
455 456 4.082245 TGCGTGATCTCACTTCAGTTCATA 60.082 41.667 8.57 0.00 44.34 2.15
458 459 2.665537 CTGCGTGATCTCACTTCAGTTC 59.334 50.000 15.42 0.00 44.34 3.01
459 460 2.297315 TCTGCGTGATCTCACTTCAGTT 59.703 45.455 19.53 0.00 44.34 3.16
460 461 1.889170 TCTGCGTGATCTCACTTCAGT 59.111 47.619 19.53 0.00 44.34 3.41
461 462 2.643933 TCTGCGTGATCTCACTTCAG 57.356 50.000 16.62 16.62 44.34 3.02
462 463 3.056607 TCAATCTGCGTGATCTCACTTCA 60.057 43.478 8.57 5.63 44.34 3.02
463 464 3.515630 TCAATCTGCGTGATCTCACTTC 58.484 45.455 8.57 1.61 44.34 3.01
464 465 3.599730 TCAATCTGCGTGATCTCACTT 57.400 42.857 8.57 0.00 44.34 3.16
465 466 3.599730 TTCAATCTGCGTGATCTCACT 57.400 42.857 8.57 0.00 44.34 3.41
466 467 4.569966 AGAATTCAATCTGCGTGATCTCAC 59.430 41.667 8.44 0.07 43.15 3.51
467 468 4.763073 AGAATTCAATCTGCGTGATCTCA 58.237 39.130 8.44 0.00 33.57 3.27
468 469 5.049167 AGAGAATTCAATCTGCGTGATCTC 58.951 41.667 8.44 0.00 33.88 2.75
469 470 5.021033 AGAGAATTCAATCTGCGTGATCT 57.979 39.130 8.44 0.00 33.57 2.75
470 471 4.085158 CGAGAGAATTCAATCTGCGTGATC 60.085 45.833 8.44 0.00 33.57 2.92
471 472 3.801050 CGAGAGAATTCAATCTGCGTGAT 59.199 43.478 8.44 0.00 36.89 3.06
472 473 3.182182 CGAGAGAATTCAATCTGCGTGA 58.818 45.455 8.44 0.00 0.00 4.35
473 474 2.283617 CCGAGAGAATTCAATCTGCGTG 59.716 50.000 8.44 1.41 0.00 5.34
474 475 2.166459 TCCGAGAGAATTCAATCTGCGT 59.834 45.455 8.44 0.00 0.00 5.24
475 476 2.793790 CTCCGAGAGAATTCAATCTGCG 59.206 50.000 8.44 8.38 0.00 5.18
478 479 7.118496 ACATTACTCCGAGAGAATTCAATCT 57.882 36.000 8.44 2.34 33.32 2.40
479 480 7.778470 AACATTACTCCGAGAGAATTCAATC 57.222 36.000 8.44 4.13 33.32 2.67
482 483 6.070767 AGGAAACATTACTCCGAGAGAATTCA 60.071 38.462 8.44 0.00 36.78 2.57
483 484 6.342111 AGGAAACATTACTCCGAGAGAATTC 58.658 40.000 1.33 0.00 36.78 2.17
484 485 6.301169 AGGAAACATTACTCCGAGAGAATT 57.699 37.500 1.33 0.00 36.78 2.17
488 489 4.339814 AGCTAGGAAACATTACTCCGAGAG 59.660 45.833 1.33 0.00 36.78 3.20
489 490 4.098044 CAGCTAGGAAACATTACTCCGAGA 59.902 45.833 1.33 0.00 36.78 4.04
490 491 4.363999 CAGCTAGGAAACATTACTCCGAG 58.636 47.826 0.00 0.00 37.47 4.63
491 492 3.430374 GCAGCTAGGAAACATTACTCCGA 60.430 47.826 0.00 0.00 36.78 4.55
492 493 2.866762 GCAGCTAGGAAACATTACTCCG 59.133 50.000 0.00 0.00 36.78 4.63
493 494 3.873952 CAGCAGCTAGGAAACATTACTCC 59.126 47.826 0.00 0.00 0.00 3.85
494 495 4.508662 ACAGCAGCTAGGAAACATTACTC 58.491 43.478 0.00 0.00 0.00 2.59
496 497 6.284459 AGATACAGCAGCTAGGAAACATTAC 58.716 40.000 0.00 0.00 0.00 1.89
497 498 6.485830 AGATACAGCAGCTAGGAAACATTA 57.514 37.500 0.00 0.00 0.00 1.90
501 502 3.376540 CGAGATACAGCAGCTAGGAAAC 58.623 50.000 0.00 0.00 0.00 2.78
505 506 0.958091 AGCGAGATACAGCAGCTAGG 59.042 55.000 0.00 0.00 36.28 3.02
507 508 0.031314 GCAGCGAGATACAGCAGCTA 59.969 55.000 0.00 0.00 41.65 3.32
508 509 1.227205 GCAGCGAGATACAGCAGCT 60.227 57.895 0.00 0.00 41.65 4.24
509 510 0.879400 ATGCAGCGAGATACAGCAGC 60.879 55.000 0.00 0.00 44.48 5.25
510 511 0.859882 CATGCAGCGAGATACAGCAG 59.140 55.000 0.00 0.00 38.75 4.24
512 513 0.531532 ACCATGCAGCGAGATACAGC 60.532 55.000 0.00 0.00 0.00 4.40
515 516 1.552348 GCGACCATGCAGCGAGATAC 61.552 60.000 0.00 0.00 34.15 2.24
516 517 1.300156 GCGACCATGCAGCGAGATA 60.300 57.895 0.00 0.00 34.15 1.98
522 523 3.643978 GATCGGCGACCATGCAGC 61.644 66.667 13.76 0.00 36.28 5.25
523 524 2.969238 GGATCGGCGACCATGCAG 60.969 66.667 13.76 0.00 36.28 4.41
524 525 4.889856 CGGATCGGCGACCATGCA 62.890 66.667 13.76 0.00 36.28 3.96
525 526 4.891727 ACGGATCGGCGACCATGC 62.892 66.667 13.76 0.00 0.00 4.06
529 530 1.571215 AAAACAACGGATCGGCGACC 61.571 55.000 13.76 14.92 0.00 4.79
530 531 1.070038 TAAAACAACGGATCGGCGAC 58.930 50.000 13.76 6.32 0.00 5.19
532 533 1.201987 CCTTAAAACAACGGATCGGCG 60.202 52.381 0.00 0.00 0.00 6.46
533 534 1.466866 GCCTTAAAACAACGGATCGGC 60.467 52.381 0.00 0.00 0.00 5.54
534 535 1.131693 GGCCTTAAAACAACGGATCGG 59.868 52.381 0.00 0.00 0.00 4.18
535 536 1.131693 GGGCCTTAAAACAACGGATCG 59.868 52.381 0.84 0.00 0.00 3.69
536 537 2.164338 TGGGCCTTAAAACAACGGATC 58.836 47.619 4.53 0.00 0.00 3.36
537 538 2.296073 TGGGCCTTAAAACAACGGAT 57.704 45.000 4.53 0.00 0.00 4.18
538 539 2.068834 TTGGGCCTTAAAACAACGGA 57.931 45.000 4.53 0.00 0.00 4.69
539 540 2.892784 TTTGGGCCTTAAAACAACGG 57.107 45.000 4.53 0.00 0.00 4.44
540 541 2.478514 GCATTTGGGCCTTAAAACAACG 59.521 45.455 4.53 0.00 0.00 4.10
552 553 0.386838 GACTATGCAGGCATTTGGGC 59.613 55.000 12.54 2.23 43.80 5.36
553 554 1.035139 GGACTATGCAGGCATTTGGG 58.965 55.000 12.54 3.84 37.82 4.12
554 555 2.062971 AGGACTATGCAGGCATTTGG 57.937 50.000 12.54 6.13 37.82 3.28
555 556 3.004106 GCTTAGGACTATGCAGGCATTTG 59.996 47.826 12.54 8.47 37.82 2.32
556 557 3.217626 GCTTAGGACTATGCAGGCATTT 58.782 45.455 12.54 0.00 37.82 2.32
557 558 2.487986 GGCTTAGGACTATGCAGGCATT 60.488 50.000 12.54 0.00 37.79 3.56
558 559 1.072965 GGCTTAGGACTATGCAGGCAT 59.927 52.381 11.94 11.94 37.79 4.40
559 560 0.469917 GGCTTAGGACTATGCAGGCA 59.530 55.000 16.05 0.00 37.79 4.75
560 561 0.250510 GGGCTTAGGACTATGCAGGC 60.251 60.000 16.05 6.95 37.79 4.85
561 562 0.398318 GGGGCTTAGGACTATGCAGG 59.602 60.000 16.05 0.00 37.79 4.85
562 563 1.131638 TGGGGCTTAGGACTATGCAG 58.868 55.000 16.05 0.00 37.79 4.41
563 564 1.211949 GTTGGGGCTTAGGACTATGCA 59.788 52.381 16.05 0.00 37.79 3.96
564 565 1.211949 TGTTGGGGCTTAGGACTATGC 59.788 52.381 8.29 8.29 36.02 3.14
565 566 3.054361 AGTTGTTGGGGCTTAGGACTATG 60.054 47.826 0.00 0.00 0.00 2.23
568 569 1.073923 CAGTTGTTGGGGCTTAGGACT 59.926 52.381 0.00 0.00 0.00 3.85
569 570 1.073284 TCAGTTGTTGGGGCTTAGGAC 59.927 52.381 0.00 0.00 0.00 3.85
570 571 1.440618 TCAGTTGTTGGGGCTTAGGA 58.559 50.000 0.00 0.00 0.00 2.94
571 572 2.286365 TTCAGTTGTTGGGGCTTAGG 57.714 50.000 0.00 0.00 0.00 2.69
572 573 3.441572 CAGATTCAGTTGTTGGGGCTTAG 59.558 47.826 0.00 0.00 0.00 2.18
573 574 3.420893 CAGATTCAGTTGTTGGGGCTTA 58.579 45.455 0.00 0.00 0.00 3.09
576 577 0.244721 GCAGATTCAGTTGTTGGGGC 59.755 55.000 0.00 0.00 0.00 5.80
577 578 0.890683 GGCAGATTCAGTTGTTGGGG 59.109 55.000 0.00 0.00 0.00 4.96
578 579 0.523072 CGGCAGATTCAGTTGTTGGG 59.477 55.000 0.00 0.00 0.00 4.12
579 580 1.522668 TCGGCAGATTCAGTTGTTGG 58.477 50.000 0.00 0.00 0.00 3.77
580 581 3.495193 CAATCGGCAGATTCAGTTGTTG 58.505 45.455 9.27 0.00 44.68 3.33
581 582 2.095059 GCAATCGGCAGATTCAGTTGTT 60.095 45.455 9.27 0.00 44.68 2.83
582 583 1.470098 GCAATCGGCAGATTCAGTTGT 59.530 47.619 9.27 0.00 44.68 3.32
583 584 1.741706 AGCAATCGGCAGATTCAGTTG 59.258 47.619 9.27 1.06 44.68 3.16
584 585 1.741706 CAGCAATCGGCAGATTCAGTT 59.258 47.619 9.27 0.00 44.68 3.16
586 587 1.660167 TCAGCAATCGGCAGATTCAG 58.340 50.000 9.27 1.03 44.68 3.02
587 588 2.336945 ATCAGCAATCGGCAGATTCA 57.663 45.000 9.27 0.00 45.36 2.57
594 595 3.764885 ACTTTACAATCAGCAATCGGC 57.235 42.857 0.00 0.00 45.30 5.54
597 598 9.956720 AAGCATATAACTTTACAATCAGCAATC 57.043 29.630 0.00 0.00 0.00 2.67
611 612 8.737168 TGAAAGCTCACATAAGCATATAACTT 57.263 30.769 0.00 0.00 45.00 2.66
614 615 9.177608 AGTTTGAAAGCTCACATAAGCATATAA 57.822 29.630 0.00 0.00 45.00 0.98
616 617 7.636150 AGTTTGAAAGCTCACATAAGCATAT 57.364 32.000 0.00 0.00 45.00 1.78
619 620 6.568462 GCTTAGTTTGAAAGCTCACATAAGCA 60.568 38.462 19.95 0.00 44.75 3.91
620 621 5.797434 GCTTAGTTTGAAAGCTCACATAAGC 59.203 40.000 14.85 14.85 44.75 3.09
621 622 6.017933 CGCTTAGTTTGAAAGCTCACATAAG 58.982 40.000 6.29 0.00 45.73 1.73
622 623 5.468746 ACGCTTAGTTTGAAAGCTCACATAA 59.531 36.000 6.29 0.00 45.73 1.90
623 624 4.994852 ACGCTTAGTTTGAAAGCTCACATA 59.005 37.500 6.29 0.00 45.73 2.29
624 625 3.815401 ACGCTTAGTTTGAAAGCTCACAT 59.185 39.130 6.29 0.00 45.73 3.21
625 626 3.202906 ACGCTTAGTTTGAAAGCTCACA 58.797 40.909 6.29 0.00 45.73 3.58
626 627 3.247648 TGACGCTTAGTTTGAAAGCTCAC 59.752 43.478 6.29 0.00 45.73 3.51
628 629 4.670227 ATGACGCTTAGTTTGAAAGCTC 57.330 40.909 6.29 4.08 45.73 4.09
630 631 4.392138 ACCTATGACGCTTAGTTTGAAAGC 59.608 41.667 0.00 0.00 44.72 3.51
631 632 6.481954 AACCTATGACGCTTAGTTTGAAAG 57.518 37.500 0.00 0.00 0.00 2.62
632 633 6.072893 GGAAACCTATGACGCTTAGTTTGAAA 60.073 38.462 0.00 0.00 0.00 2.69
633 634 5.410439 GGAAACCTATGACGCTTAGTTTGAA 59.590 40.000 0.00 0.00 0.00 2.69
635 636 4.693566 TGGAAACCTATGACGCTTAGTTTG 59.306 41.667 0.00 0.00 0.00 2.93
636 637 4.694037 GTGGAAACCTATGACGCTTAGTTT 59.306 41.667 0.00 0.00 0.00 2.66
639 640 4.113354 GAGTGGAAACCTATGACGCTTAG 58.887 47.826 0.00 0.00 0.00 2.18
640 641 3.512329 TGAGTGGAAACCTATGACGCTTA 59.488 43.478 0.00 0.00 0.00 3.09
641 642 2.301870 TGAGTGGAAACCTATGACGCTT 59.698 45.455 0.00 0.00 0.00 4.68
643 644 2.380084 TGAGTGGAAACCTATGACGC 57.620 50.000 0.00 0.00 0.00 5.19
644 645 5.006153 TGTATGAGTGGAAACCTATGACG 57.994 43.478 0.00 0.00 0.00 4.35
645 646 6.222038 TCTGTATGAGTGGAAACCTATGAC 57.778 41.667 0.00 0.00 0.00 3.06
647 648 7.957002 AGTATCTGTATGAGTGGAAACCTATG 58.043 38.462 0.00 0.00 0.00 2.23
648 649 9.080097 GTAGTATCTGTATGAGTGGAAACCTAT 57.920 37.037 0.00 0.00 0.00 2.57
649 650 8.280084 AGTAGTATCTGTATGAGTGGAAACCTA 58.720 37.037 0.00 0.00 0.00 3.08
650 651 7.126733 AGTAGTATCTGTATGAGTGGAAACCT 58.873 38.462 0.00 0.00 0.00 3.50
652 653 8.132362 CAGAGTAGTATCTGTATGAGTGGAAAC 58.868 40.741 0.00 0.00 41.52 2.78
654 655 6.263392 GCAGAGTAGTATCTGTATGAGTGGAA 59.737 42.308 5.69 0.00 46.93 3.53
655 656 5.765677 GCAGAGTAGTATCTGTATGAGTGGA 59.234 44.000 5.69 0.00 46.93 4.02
656 657 5.048364 GGCAGAGTAGTATCTGTATGAGTGG 60.048 48.000 5.69 0.00 46.93 4.00
657 658 5.767665 AGGCAGAGTAGTATCTGTATGAGTG 59.232 44.000 5.69 0.00 46.93 3.51
658 659 5.947663 AGGCAGAGTAGTATCTGTATGAGT 58.052 41.667 5.69 0.00 46.93 3.41
659 660 6.000840 TGAGGCAGAGTAGTATCTGTATGAG 58.999 44.000 5.69 0.00 46.93 2.90
660 661 5.941788 TGAGGCAGAGTAGTATCTGTATGA 58.058 41.667 5.69 0.00 46.93 2.15
662 663 6.194285 TCTGAGGCAGAGTAGTATCTGTAT 57.806 41.667 5.69 0.00 46.93 2.29
663 664 5.632034 TCTGAGGCAGAGTAGTATCTGTA 57.368 43.478 5.69 0.00 46.93 2.74
664 665 4.511786 TCTGAGGCAGAGTAGTATCTGT 57.488 45.455 5.69 0.00 46.93 3.41
675 676 3.089284 TGTACGAAATCTCTGAGGCAGA 58.911 45.455 4.59 0.00 38.25 4.26
676 677 3.510388 TGTACGAAATCTCTGAGGCAG 57.490 47.619 4.59 0.00 0.00 4.85
678 679 3.614616 CACTTGTACGAAATCTCTGAGGC 59.385 47.826 4.59 0.00 0.00 4.70
679 680 4.810790 ACACTTGTACGAAATCTCTGAGG 58.189 43.478 4.59 0.00 0.00 3.86
681 682 6.570672 ACTACACTTGTACGAAATCTCTGA 57.429 37.500 0.00 0.00 0.00 3.27
682 683 6.967767 CCTACTACACTTGTACGAAATCTCTG 59.032 42.308 0.00 0.00 0.00 3.35
683 684 6.883217 TCCTACTACACTTGTACGAAATCTCT 59.117 38.462 0.00 0.00 0.00 3.10
684 685 7.081526 TCCTACTACACTTGTACGAAATCTC 57.918 40.000 0.00 0.00 0.00 2.75
686 687 9.962783 ATAATCCTACTACACTTGTACGAAATC 57.037 33.333 0.00 0.00 0.00 2.17
688 689 9.577110 CAATAATCCTACTACACTTGTACGAAA 57.423 33.333 0.00 0.00 0.00 3.46
689 690 8.959548 TCAATAATCCTACTACACTTGTACGAA 58.040 33.333 0.00 0.00 0.00 3.85
690 691 8.510243 TCAATAATCCTACTACACTTGTACGA 57.490 34.615 0.00 0.00 0.00 3.43
692 693 8.142551 CCCTCAATAATCCTACTACACTTGTAC 58.857 40.741 0.00 0.00 0.00 2.90
693 694 8.063153 TCCCTCAATAATCCTACTACACTTGTA 58.937 37.037 0.00 0.00 0.00 2.41
694 695 6.901300 TCCCTCAATAATCCTACTACACTTGT 59.099 38.462 0.00 0.00 0.00 3.16
695 696 7.361457 TCCCTCAATAATCCTACTACACTTG 57.639 40.000 0.00 0.00 0.00 3.16
696 697 7.071321 CCTTCCCTCAATAATCCTACTACACTT 59.929 40.741 0.00 0.00 0.00 3.16
698 699 6.326843 ACCTTCCCTCAATAATCCTACTACAC 59.673 42.308 0.00 0.00 0.00 2.90
700 701 6.997942 ACCTTCCCTCAATAATCCTACTAC 57.002 41.667 0.00 0.00 0.00 2.73
701 702 7.232127 CGTAACCTTCCCTCAATAATCCTACTA 59.768 40.741 0.00 0.00 0.00 1.82
702 703 6.041751 CGTAACCTTCCCTCAATAATCCTACT 59.958 42.308 0.00 0.00 0.00 2.57
705 706 4.720273 ACGTAACCTTCCCTCAATAATCCT 59.280 41.667 0.00 0.00 0.00 3.24
706 707 5.032327 ACGTAACCTTCCCTCAATAATCC 57.968 43.478 0.00 0.00 0.00 3.01
707 708 8.393366 GTTTTACGTAACCTTCCCTCAATAATC 58.607 37.037 7.70 0.00 0.00 1.75
708 709 8.105197 AGTTTTACGTAACCTTCCCTCAATAAT 58.895 33.333 7.70 0.00 0.00 1.28
709 710 7.452562 AGTTTTACGTAACCTTCCCTCAATAA 58.547 34.615 7.70 0.00 0.00 1.40
710 711 7.008021 AGTTTTACGTAACCTTCCCTCAATA 57.992 36.000 7.70 0.00 0.00 1.90
713 714 4.961438 AGTTTTACGTAACCTTCCCTCA 57.039 40.909 7.70 0.00 0.00 3.86
714 715 5.178252 GTCAAGTTTTACGTAACCTTCCCTC 59.822 44.000 7.70 1.09 0.00 4.30
715 716 5.059161 GTCAAGTTTTACGTAACCTTCCCT 58.941 41.667 7.70 0.00 0.00 4.20
717 718 5.010249 CGTCAAGTTTTACGTAACCTTCC 57.990 43.478 7.70 5.56 34.48 3.46
726 727 4.720530 AAGGCTTACGTCAAGTTTTACG 57.279 40.909 0.00 6.08 44.47 3.18
727 728 5.813717 ACAAAGGCTTACGTCAAGTTTTAC 58.186 37.500 0.00 0.00 36.55 2.01
728 729 7.733402 ATACAAAGGCTTACGTCAAGTTTTA 57.267 32.000 0.00 0.00 36.55 1.52
729 730 4.976224 ACAAAGGCTTACGTCAAGTTTT 57.024 36.364 0.00 0.00 36.55 2.43
730 731 7.443272 ACTTATACAAAGGCTTACGTCAAGTTT 59.557 33.333 0.00 0.00 36.55 2.66
731 732 6.932960 ACTTATACAAAGGCTTACGTCAAGTT 59.067 34.615 0.00 0.00 36.55 2.66
732 733 6.367969 CACTTATACAAAGGCTTACGTCAAGT 59.632 38.462 0.00 10.93 36.55 3.16
733 734 6.367969 ACACTTATACAAAGGCTTACGTCAAG 59.632 38.462 0.00 10.37 37.31 3.02
735 736 5.786311 ACACTTATACAAAGGCTTACGTCA 58.214 37.500 0.00 0.00 0.00 4.35
736 737 6.474751 CCTACACTTATACAAAGGCTTACGTC 59.525 42.308 0.00 0.00 0.00 4.34
737 738 6.153340 TCCTACACTTATACAAAGGCTTACGT 59.847 38.462 0.00 3.66 0.00 3.57
739 740 8.959705 AATCCTACACTTATACAAAGGCTTAC 57.040 34.615 0.00 0.00 0.00 2.34
741 742 8.769359 AGTAATCCTACACTTATACAAAGGCTT 58.231 33.333 0.00 0.00 0.00 4.35
742 743 8.204836 CAGTAATCCTACACTTATACAAAGGCT 58.795 37.037 0.00 0.00 0.00 4.58
744 745 8.701895 TCCAGTAATCCTACACTTATACAAAGG 58.298 37.037 0.00 0.00 0.00 3.11
763 764 9.923143 CGATGTCAGGTAATTATATTCCAGTAA 57.077 33.333 0.00 0.00 0.00 2.24
766 767 6.818644 CCCGATGTCAGGTAATTATATTCCAG 59.181 42.308 0.00 0.00 0.00 3.86
767 768 6.499000 TCCCGATGTCAGGTAATTATATTCCA 59.501 38.462 0.00 0.00 0.00 3.53
768 769 6.942976 TCCCGATGTCAGGTAATTATATTCC 58.057 40.000 0.00 0.00 0.00 3.01
770 771 7.674348 TCTCTCCCGATGTCAGGTAATTATATT 59.326 37.037 0.00 0.00 0.00 1.28
771 772 7.182760 TCTCTCCCGATGTCAGGTAATTATAT 58.817 38.462 0.00 0.00 0.00 0.86
772 773 6.549242 TCTCTCCCGATGTCAGGTAATTATA 58.451 40.000 0.00 0.00 0.00 0.98
773 774 5.394738 TCTCTCCCGATGTCAGGTAATTAT 58.605 41.667 0.00 0.00 0.00 1.28
774 775 4.800023 TCTCTCCCGATGTCAGGTAATTA 58.200 43.478 0.00 0.00 0.00 1.40
775 776 3.639094 CTCTCTCCCGATGTCAGGTAATT 59.361 47.826 0.00 0.00 0.00 1.40
777 778 2.656002 CTCTCTCCCGATGTCAGGTAA 58.344 52.381 0.00 0.00 0.00 2.85
778 779 1.133761 CCTCTCTCCCGATGTCAGGTA 60.134 57.143 0.00 0.00 0.00 3.08
780 781 1.743321 GCCTCTCTCCCGATGTCAGG 61.743 65.000 0.00 0.00 0.00 3.86
821 822 1.654105 CCTCGTCCAAAAATCTCGTCG 59.346 52.381 0.00 0.00 0.00 5.12
834 842 4.436998 CCCTCGTGTGCCTCGTCC 62.437 72.222 0.00 0.00 0.00 4.79
920 9083 1.462283 CATGTCTGTTGGTTCGAGCTG 59.538 52.381 0.00 0.00 0.00 4.24
936 9101 3.216800 TGTGCTCTTTGCTTTCTCATGT 58.783 40.909 0.00 0.00 43.37 3.21
975 9156 4.389576 GAGGCCGTGCTTGCGTTG 62.390 66.667 0.00 0.00 0.00 4.10
1179 13146 2.920384 TCGCTGTGGTACTGGCCA 60.920 61.111 4.71 4.71 35.93 5.36
1278 13245 3.521524 GCGTTTAAGCCGATATTGGAG 57.478 47.619 13.71 0.00 0.00 3.86
1449 13431 0.598562 AGTGCTGAACGATCGACTGT 59.401 50.000 24.34 3.42 0.00 3.55
1472 13454 2.735663 CAATATCGTCATGAGCTGGAGC 59.264 50.000 0.00 0.00 42.49 4.70
1473 13455 4.248691 TCAATATCGTCATGAGCTGGAG 57.751 45.455 0.00 0.00 0.00 3.86
1474 13456 4.039609 ACATCAATATCGTCATGAGCTGGA 59.960 41.667 0.00 0.00 0.00 3.86
1492 13492 3.937814 AGCAAATACTCCGTGAACATCA 58.062 40.909 0.00 0.00 0.00 3.07
1504 13504 4.829492 AGCTGAAACTTGGAAGCAAATACT 59.171 37.500 0.00 0.00 38.14 2.12
1515 13523 4.107622 CACACTTGAAAGCTGAAACTTGG 58.892 43.478 0.00 0.00 0.00 3.61
1588 13599 2.507769 CGTAGACGGCCGGGAAAC 60.508 66.667 31.76 19.71 35.37 2.78
1697 13740 6.689669 ACTTGCACAATTACAAACTTACGTTC 59.310 34.615 0.00 0.00 31.66 3.95
1713 13756 3.133901 TCACCTTAGTCTGACTTGCACAA 59.866 43.478 16.53 2.75 0.00 3.33
1727 13782 5.241506 GGACAGAGAGATGAGATCACCTTAG 59.758 48.000 0.00 0.00 0.00 2.18
1745 13800 2.450886 TCATAGCCTCATAGGGGACAGA 59.549 50.000 0.00 0.00 35.37 3.41
1754 13814 2.041701 TGCAGTGCTCATAGCCTCATA 58.958 47.619 17.60 0.00 41.51 2.15
1755 13815 0.835276 TGCAGTGCTCATAGCCTCAT 59.165 50.000 17.60 0.00 41.51 2.90
1756 13816 0.835276 ATGCAGTGCTCATAGCCTCA 59.165 50.000 17.60 0.00 41.51 3.86
1757 13817 2.411904 GTATGCAGTGCTCATAGCCTC 58.588 52.381 17.60 0.00 41.51 4.70
1758 13818 1.071385 GGTATGCAGTGCTCATAGCCT 59.929 52.381 17.60 0.00 41.51 4.58
1759 13819 1.071385 AGGTATGCAGTGCTCATAGCC 59.929 52.381 17.60 9.69 42.63 3.93
1760 13820 2.540265 AGGTATGCAGTGCTCATAGC 57.460 50.000 17.60 15.37 42.22 2.97
1761 13821 3.056250 CCCTAGGTATGCAGTGCTCATAG 60.056 52.174 17.60 15.90 0.00 2.23
1791 13851 1.528292 TTGCGGGCGTTTTAAGGCAT 61.528 50.000 9.09 0.00 41.30 4.40
1848 13909 0.820871 ATGTTTGTGCCACCACGTTT 59.179 45.000 0.00 0.00 45.04 3.60
1907 13993 0.541863 AAACCTCCCCTGACATAGCG 59.458 55.000 0.00 0.00 0.00 4.26
1910 14003 3.028850 CTCGTAAACCTCCCCTGACATA 58.971 50.000 0.00 0.00 0.00 2.29
1969 14072 1.927174 CGTGCTTCCTCCTTATTGTCG 59.073 52.381 0.00 0.00 0.00 4.35
1984 14087 0.241749 CATGGCAATTGACACGTGCT 59.758 50.000 18.26 0.00 34.80 4.40
1997 14100 1.288188 TCCTCCTTGATGTCATGGCA 58.712 50.000 0.60 0.60 40.03 4.92
2059 14164 6.012658 TGATTTCCGAGGTTGATCTTTTTG 57.987 37.500 0.00 0.00 0.00 2.44
2098 14203 5.132502 TCTTTGAGCATGGTCTTCTTTTCA 58.867 37.500 24.30 0.51 0.00 2.69
2112 14220 1.349026 CAACCCTCCTCTCTTTGAGCA 59.651 52.381 0.00 0.00 41.35 4.26
2117 14225 0.988063 GGCTCAACCCTCCTCTCTTT 59.012 55.000 0.00 0.00 0.00 2.52
2139 14249 1.964373 GGTTTCCTTCGAAGCGGCA 60.964 57.895 19.99 0.00 30.40 5.69
2149 14259 5.130145 TGATGGTCAACATTTTGGTTTCCTT 59.870 36.000 0.00 0.00 40.72 3.36
2175 14286 5.570206 CACATGAAAATCAAACTCGTCCATG 59.430 40.000 0.00 0.00 36.08 3.66
2187 14298 3.305267 CGACCTTTGCCACATGAAAATCA 60.305 43.478 0.00 0.00 0.00 2.57
2191 14302 1.336440 CACGACCTTTGCCACATGAAA 59.664 47.619 0.00 0.00 0.00 2.69
2194 14305 1.081242 GCACGACCTTTGCCACATG 60.081 57.895 0.00 0.00 33.58 3.21
2235 14346 4.367450 GCTACCTCTATCAGAAGTGCTTG 58.633 47.826 0.00 0.00 0.00 4.01
2298 14419 3.486383 CCACCCAGACAAGTTGTATGTT 58.514 45.455 24.75 11.80 37.86 2.71
2302 14423 0.109723 GCCCACCCAGACAAGTTGTA 59.890 55.000 8.88 0.00 0.00 2.41
2334 14455 3.361786 CCCCATCATAAAAGTTCCGGTT 58.638 45.455 0.00 0.00 0.00 4.44
2352 14473 1.099689 TTAGCTTTTACATGCGCCCC 58.900 50.000 4.18 0.00 0.00 5.80
2386 14507 6.811170 CCGTATGCAATCTTTACAACCAAAAT 59.189 34.615 0.00 0.00 0.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.