Multiple sequence alignment - TraesCS3B01G036600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G036600 chr3B 100.000 3068 0 0 1 3068 17959741 17956674 0.000000e+00 5666.0
1 TraesCS3B01G036600 chr3B 97.872 47 1 0 528 574 36018108 36018062 7.050000e-12 82.4
2 TraesCS3B01G036600 chr3D 92.218 1452 77 22 637 2078 12354509 12353084 0.000000e+00 2023.0
3 TraesCS3B01G036600 chr3D 86.800 250 24 5 221 470 12355818 12355578 1.400000e-68 270.0
4 TraesCS3B01G036600 chr3D 92.373 118 6 1 2954 3068 12381529 12381646 6.810000e-37 165.0
5 TraesCS3B01G036600 chr3D 97.917 48 1 0 527 574 38378978 38378931 1.960000e-12 84.2
6 TraesCS3B01G036600 chr3A 92.092 1429 71 19 673 2081 24798242 24799648 0.000000e+00 1975.0
7 TraesCS3B01G036600 chr3A 89.302 673 46 11 1 671 24793483 24794131 0.000000e+00 821.0
8 TraesCS3B01G036600 chr3A 86.026 229 15 10 731 947 24795154 24795377 2.380000e-56 230.0
9 TraesCS3B01G036600 chr3A 89.256 121 7 3 2954 3068 24774904 24774784 2.470000e-31 147.0
10 TraesCS3B01G036600 chr3A 86.813 91 7 1 654 744 24794149 24794234 2.520000e-16 97.1
11 TraesCS3B01G036600 chr3A 93.478 46 3 0 529 574 217352197 217352242 5.490000e-08 69.4
12 TraesCS3B01G036600 chr7D 90.756 595 49 2 2354 2942 498258186 498258780 0.000000e+00 789.0
13 TraesCS3B01G036600 chr1A 90.741 594 43 8 2356 2942 518772208 518771620 0.000000e+00 782.0
14 TraesCS3B01G036600 chr1D 90.420 595 45 7 2356 2942 472307356 472306766 0.000000e+00 773.0
15 TraesCS3B01G036600 chr2A 87.960 598 57 12 2356 2942 618634 619227 0.000000e+00 691.0
16 TraesCS3B01G036600 chr2A 95.918 49 0 2 527 574 41106063 41106110 9.120000e-11 78.7
17 TraesCS3B01G036600 chr1B 87.731 595 62 8 2358 2942 636869743 636870336 0.000000e+00 684.0
18 TraesCS3B01G036600 chr1B 87.416 596 65 7 2355 2942 488219130 488219723 0.000000e+00 676.0
19 TraesCS3B01G036600 chr6B 84.743 603 70 14 2355 2942 618657586 618656991 4.410000e-163 584.0
20 TraesCS3B01G036600 chr6B 80.000 460 79 10 17 469 51430151 51430604 8.200000e-86 327.0
21 TraesCS3B01G036600 chr2D 83.595 573 74 14 2356 2918 349300082 349300644 1.260000e-143 520.0
22 TraesCS3B01G036600 chr2D 95.833 48 2 0 527 574 548462981 548463028 9.120000e-11 78.7
23 TraesCS3B01G036600 chr2D 97.674 43 1 0 529 571 636127598 636127640 1.180000e-09 75.0
24 TraesCS3B01G036600 chr4A 83.509 570 77 11 2357 2918 712114302 712114862 1.630000e-142 516.0
25 TraesCS3B01G036600 chr7A 95.918 49 0 2 527 574 30414156 30414109 9.120000e-11 78.7
26 TraesCS3B01G036600 chr7A 95.833 48 2 0 527 574 652530830 652530877 9.120000e-11 78.7
27 TraesCS3B01G036600 chr6A 95.833 48 2 0 527 574 606575332 606575379 9.120000e-11 78.7
28 TraesCS3B01G036600 chr6A 93.750 48 3 0 527 574 51902128 51902175 4.240000e-09 73.1
29 TraesCS3B01G036600 chr5A 93.750 48 3 0 527 574 548689692 548689645 4.240000e-09 73.1
30 TraesCS3B01G036600 chr4D 91.489 47 3 1 528 574 491373794 491373749 2.550000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G036600 chr3B 17956674 17959741 3067 True 5666.000 5666 100.00000 1 3068 1 chr3B.!!$R1 3067
1 TraesCS3B01G036600 chr3D 12353084 12355818 2734 True 1146.500 2023 89.50900 221 2078 2 chr3D.!!$R2 1857
2 TraesCS3B01G036600 chr3A 24793483 24799648 6165 False 780.775 1975 88.55825 1 2081 4 chr3A.!!$F2 2080
3 TraesCS3B01G036600 chr7D 498258186 498258780 594 False 789.000 789 90.75600 2354 2942 1 chr7D.!!$F1 588
4 TraesCS3B01G036600 chr1A 518771620 518772208 588 True 782.000 782 90.74100 2356 2942 1 chr1A.!!$R1 586
5 TraesCS3B01G036600 chr1D 472306766 472307356 590 True 773.000 773 90.42000 2356 2942 1 chr1D.!!$R1 586
6 TraesCS3B01G036600 chr2A 618634 619227 593 False 691.000 691 87.96000 2356 2942 1 chr2A.!!$F1 586
7 TraesCS3B01G036600 chr1B 636869743 636870336 593 False 684.000 684 87.73100 2358 2942 1 chr1B.!!$F2 584
8 TraesCS3B01G036600 chr1B 488219130 488219723 593 False 676.000 676 87.41600 2355 2942 1 chr1B.!!$F1 587
9 TraesCS3B01G036600 chr6B 618656991 618657586 595 True 584.000 584 84.74300 2355 2942 1 chr6B.!!$R1 587
10 TraesCS3B01G036600 chr2D 349300082 349300644 562 False 520.000 520 83.59500 2356 2918 1 chr2D.!!$F1 562
11 TraesCS3B01G036600 chr4A 712114302 712114862 560 False 516.000 516 83.50900 2357 2918 1 chr4A.!!$F1 561

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
272 274 0.391263 ACCGCCTCGAGGATTGTTTC 60.391 55.0 35.69 14.09 37.39 2.78 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2203 6429 0.032403 TGTCCATTTCGGTCGACGTT 59.968 50.0 9.92 0.0 44.69 3.99 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.181471 CGAGTGCTAATCCACTGATCCTT 60.181 47.826 0.00 0.00 45.55 3.36
33 34 3.128242 CCACTGATCCTTTGATGCAACTC 59.872 47.826 0.00 0.00 0.00 3.01
52 53 1.123077 CCCTCGAGGATGATGGTTGA 58.877 55.000 33.39 0.00 38.24 3.18
75 76 3.230134 TCTTTGCAATGCCCTTTGTACT 58.770 40.909 1.53 0.00 0.00 2.73
76 77 3.005684 TCTTTGCAATGCCCTTTGTACTG 59.994 43.478 1.53 0.00 0.00 2.74
80 81 2.795329 CAATGCCCTTTGTACTGACCT 58.205 47.619 0.00 0.00 0.00 3.85
90 91 4.715534 TTGTACTGACCTTTTCATCCCA 57.284 40.909 0.00 0.00 32.17 4.37
93 94 2.863809 ACTGACCTTTTCATCCCACAC 58.136 47.619 0.00 0.00 32.17 3.82
111 113 3.248602 CACACGACTTCTTCCTTTTCCAG 59.751 47.826 0.00 0.00 0.00 3.86
113 115 3.248602 CACGACTTCTTCCTTTTCCAGTG 59.751 47.826 0.00 0.00 0.00 3.66
149 151 1.378882 CCAAGCATCCATGACCACCG 61.379 60.000 0.00 0.00 0.00 4.94
169 171 2.939103 CGTCATTCTTCAATCAGACCCC 59.061 50.000 0.00 0.00 0.00 4.95
171 173 4.593956 GTCATTCTTCAATCAGACCCCTT 58.406 43.478 0.00 0.00 0.00 3.95
174 176 5.488919 TCATTCTTCAATCAGACCCCTTAGT 59.511 40.000 0.00 0.00 0.00 2.24
188 190 2.424246 CCCTTAGTCTCTCGGTGTCTTC 59.576 54.545 0.00 0.00 0.00 2.87
200 202 2.162208 CGGTGTCTTCATCATTGGGTTG 59.838 50.000 0.00 0.00 0.00 3.77
206 208 2.601240 TCATCATTGGGTTGCCTCAA 57.399 45.000 0.00 0.00 0.00 3.02
222 224 3.364964 GCCTCAAATGTTGTGGTTCGTAG 60.365 47.826 9.99 0.00 44.17 3.51
229 231 2.094906 TGTTGTGGTTCGTAGATCTCGG 60.095 50.000 0.00 0.00 35.04 4.63
272 274 0.391263 ACCGCCTCGAGGATTGTTTC 60.391 55.000 35.69 14.09 37.39 2.78
283 285 4.089361 GAGGATTGTTTCTTCCCCAATGT 58.911 43.478 0.00 0.00 32.05 2.71
284 286 4.492646 AGGATTGTTTCTTCCCCAATGTT 58.507 39.130 0.00 0.00 32.05 2.71
378 380 2.582636 AGGACATGCACTAATTTCCCCT 59.417 45.455 0.00 0.00 28.13 4.79
400 402 5.814705 CCTAATGCACTCCTTCTCAGTTTAG 59.185 44.000 0.00 0.00 0.00 1.85
477 479 3.491447 GCATCCAAATCGCCAGCTAAAAT 60.491 43.478 0.00 0.00 0.00 1.82
482 484 3.782889 AATCGCCAGCTAAAATTGACC 57.217 42.857 0.00 0.00 0.00 4.02
491 493 4.981674 CAGCTAAAATTGACCGAGCAAAAA 59.018 37.500 0.00 0.00 35.55 1.94
500 503 9.662545 AAATTGACCGAGCAAAAATAAAAATTG 57.337 25.926 0.00 0.00 0.00 2.32
531 534 6.016777 CCTGACATATAGCTAAAGGGCAAAAG 60.017 42.308 0.00 0.00 34.17 2.27
534 537 7.396055 TGACATATAGCTAAAGGGCAAAAGTTT 59.604 33.333 0.00 0.00 34.17 2.66
541 544 6.769608 CTAAAGGGCAAAAGTTTTAGCTTG 57.230 37.500 16.80 2.40 0.00 4.01
567 570 6.042777 TGCAAAATTTCGTGACCAAATAACA 58.957 32.000 0.00 0.00 0.00 2.41
568 571 6.703607 TGCAAAATTTCGTGACCAAATAACAT 59.296 30.769 0.00 0.00 0.00 2.71
569 572 7.225538 TGCAAAATTTCGTGACCAAATAACATT 59.774 29.630 0.00 0.00 0.00 2.71
570 573 7.739911 GCAAAATTTCGTGACCAAATAACATTC 59.260 33.333 0.00 0.00 0.00 2.67
571 574 7.561237 AAATTTCGTGACCAAATAACATTCG 57.439 32.000 0.00 0.00 0.00 3.34
572 575 5.926214 TTTCGTGACCAAATAACATTCGA 57.074 34.783 0.00 0.00 0.00 3.71
573 576 5.524511 TTCGTGACCAAATAACATTCGAG 57.475 39.130 0.00 0.00 0.00 4.04
574 577 4.811908 TCGTGACCAAATAACATTCGAGA 58.188 39.130 0.00 0.00 0.00 4.04
575 578 5.231702 TCGTGACCAAATAACATTCGAGAA 58.768 37.500 0.00 0.00 0.00 2.87
576 579 5.697178 TCGTGACCAAATAACATTCGAGAAA 59.303 36.000 0.00 0.00 0.00 2.52
577 580 6.015504 CGTGACCAAATAACATTCGAGAAAG 58.984 40.000 0.00 0.00 0.00 2.62
578 581 6.314784 GTGACCAAATAACATTCGAGAAAGG 58.685 40.000 0.00 0.00 0.00 3.11
579 582 6.001460 TGACCAAATAACATTCGAGAAAGGT 58.999 36.000 0.00 0.00 32.08 3.50
580 583 6.072728 TGACCAAATAACATTCGAGAAAGGTG 60.073 38.462 0.00 0.00 30.97 4.00
581 584 5.768164 ACCAAATAACATTCGAGAAAGGTGT 59.232 36.000 0.00 0.00 30.97 4.16
582 585 6.086222 CCAAATAACATTCGAGAAAGGTGTG 58.914 40.000 0.00 0.00 30.97 3.82
583 586 4.946784 ATAACATTCGAGAAAGGTGTGC 57.053 40.909 0.00 0.00 30.97 4.57
584 587 2.254546 ACATTCGAGAAAGGTGTGCA 57.745 45.000 0.00 0.00 28.97 4.57
585 588 2.146342 ACATTCGAGAAAGGTGTGCAG 58.854 47.619 0.00 0.00 28.97 4.41
590 593 3.476552 TCGAGAAAGGTGTGCAGAATTT 58.523 40.909 0.00 0.00 0.00 1.82
604 607 5.569059 GTGCAGAATTTCGTGACCAAATAAG 59.431 40.000 0.00 0.00 0.00 1.73
615 618 4.868734 GTGACCAAATAAGGTTCGAGTAGG 59.131 45.833 0.00 0.00 43.38 3.18
624 627 3.442076 AGGTTCGAGTAGGAAATCCAGT 58.558 45.455 1.67 0.00 38.89 4.00
625 628 3.447944 AGGTTCGAGTAGGAAATCCAGTC 59.552 47.826 1.67 0.43 38.89 3.51
626 629 3.447944 GGTTCGAGTAGGAAATCCAGTCT 59.552 47.826 1.67 0.00 38.89 3.24
627 630 4.081586 GGTTCGAGTAGGAAATCCAGTCTT 60.082 45.833 1.67 0.00 38.89 3.01
628 631 5.126707 GGTTCGAGTAGGAAATCCAGTCTTA 59.873 44.000 1.67 0.00 38.89 2.10
629 632 6.350780 GGTTCGAGTAGGAAATCCAGTCTTAA 60.351 42.308 1.67 0.00 38.89 1.85
630 633 6.452494 TCGAGTAGGAAATCCAGTCTTAAG 57.548 41.667 1.67 0.00 38.89 1.85
659 662 5.661458 ACTAATACGTGAGGTTCAGATTGG 58.339 41.667 0.00 0.00 0.00 3.16
711 4913 5.061853 TCTACCGCTCGTTCTGTATAGAAT 58.938 41.667 5.13 0.00 44.27 2.40
712 4914 6.226052 TCTACCGCTCGTTCTGTATAGAATA 58.774 40.000 5.13 0.00 44.27 1.75
713 4915 5.359716 ACCGCTCGTTCTGTATAGAATAG 57.640 43.478 5.13 7.50 44.27 1.73
714 4916 5.061853 ACCGCTCGTTCTGTATAGAATAGA 58.938 41.667 14.68 11.86 44.27 1.98
715 4917 5.179742 ACCGCTCGTTCTGTATAGAATAGAG 59.820 44.000 21.95 21.95 44.27 2.43
804 5006 6.095720 TGTTCAACCTAATTCAAACCGAACTT 59.904 34.615 0.00 0.00 36.12 2.66
805 5007 6.308371 TCAACCTAATTCAAACCGAACTTC 57.692 37.500 0.00 0.00 36.12 3.01
806 5008 5.823570 TCAACCTAATTCAAACCGAACTTCA 59.176 36.000 0.00 0.00 36.12 3.02
807 5009 6.488683 TCAACCTAATTCAAACCGAACTTCAT 59.511 34.615 0.00 0.00 36.12 2.57
808 5010 6.254281 ACCTAATTCAAACCGAACTTCATG 57.746 37.500 0.00 0.00 36.12 3.07
819 5021 1.324740 AACTTCATGCATGGCGCCAT 61.325 50.000 36.10 36.10 41.33 4.40
836 5038 2.542597 CCATATTTGCGTTGCATTGCT 58.457 42.857 10.49 0.00 38.76 3.91
873 5075 3.372206 CGTCCATCGCATTCTTTCTCTTT 59.628 43.478 0.00 0.00 0.00 2.52
874 5076 4.493220 CGTCCATCGCATTCTTTCTCTTTC 60.493 45.833 0.00 0.00 0.00 2.62
875 5077 4.633565 GTCCATCGCATTCTTTCTCTTTCT 59.366 41.667 0.00 0.00 0.00 2.52
878 5080 4.543590 TCGCATTCTTTCTCTTTCTCCT 57.456 40.909 0.00 0.00 0.00 3.69
881 5083 3.944650 GCATTCTTTCTCTTTCTCCTCCC 59.055 47.826 0.00 0.00 0.00 4.30
882 5084 4.566488 GCATTCTTTCTCTTTCTCCTCCCA 60.566 45.833 0.00 0.00 0.00 4.37
883 5085 4.899352 TTCTTTCTCTTTCTCCTCCCAG 57.101 45.455 0.00 0.00 0.00 4.45
885 5087 4.693420 TCTTTCTCTTTCTCCTCCCAGAT 58.307 43.478 0.00 0.00 0.00 2.90
886 5088 4.714308 TCTTTCTCTTTCTCCTCCCAGATC 59.286 45.833 0.00 0.00 0.00 2.75
899 5119 6.499436 TCCTCCCAGATCCATCGTATAAATA 58.501 40.000 0.00 0.00 0.00 1.40
908 5133 9.213777 AGATCCATCGTATAAATATGTACCCAT 57.786 33.333 0.00 0.00 34.97 4.00
909 5134 9.261180 GATCCATCGTATAAATATGTACCCATG 57.739 37.037 0.00 0.00 32.29 3.66
918 5143 1.624336 ATGTACCCATGGCATGCATC 58.376 50.000 22.02 11.58 0.00 3.91
963 5189 5.767372 CGGAGGTCGATCGATACATCGTG 62.767 56.522 22.50 9.17 44.99 4.35
1146 5372 3.406200 CTGTGGGAGCTGGAGGGG 61.406 72.222 0.00 0.00 0.00 4.79
1391 5617 0.616111 TTCACCTCCTCCTGCTCCTC 60.616 60.000 0.00 0.00 0.00 3.71
1680 5906 1.142474 GAAAGTACCCCAACACGACG 58.858 55.000 0.00 0.00 0.00 5.12
1853 6079 2.247635 TCCCCACAGAGTAAGCTCCTAT 59.752 50.000 0.00 0.00 42.59 2.57
1854 6080 3.465966 TCCCCACAGAGTAAGCTCCTATA 59.534 47.826 0.00 0.00 42.59 1.31
1855 6081 4.108124 TCCCCACAGAGTAAGCTCCTATAT 59.892 45.833 0.00 0.00 42.59 0.86
1856 6082 5.315109 TCCCCACAGAGTAAGCTCCTATATA 59.685 44.000 0.00 0.00 42.59 0.86
1888 6114 8.256605 AGATGTATAGTAACTCATGGATGCATC 58.743 37.037 18.81 18.81 36.95 3.91
1890 6116 7.910584 TGTATAGTAACTCATGGATGCATCAT 58.089 34.615 27.25 15.74 0.00 2.45
1905 6131 1.066002 CATCATTCATGGCGTTGGGAC 59.934 52.381 0.00 0.00 0.00 4.46
1913 6139 1.173043 TGGCGTTGGGACATTGAATC 58.827 50.000 0.00 0.00 39.30 2.52
1916 6142 1.670811 GCGTTGGGACATTGAATCGAT 59.329 47.619 0.00 0.00 39.30 3.59
1950 6176 2.203788 AAGGGAGACGACAGGGCA 60.204 61.111 0.00 0.00 0.00 5.36
1986 6212 4.496336 AAGATGGAGGCGCTGGGC 62.496 66.667 7.64 8.35 42.51 5.36
2052 6278 1.204113 AGAGCTTCCAGGACAAGGGG 61.204 60.000 0.00 0.00 0.00 4.79
2055 6281 1.301293 CTTCCAGGACAAGGGGCTC 59.699 63.158 0.00 0.00 0.00 4.70
2058 6284 2.674220 CCAGGACAAGGGGCTCCTC 61.674 68.421 5.00 0.00 44.07 3.71
2075 6301 2.303022 TCCTCCTTCCTTGACATGACAC 59.697 50.000 0.00 0.00 0.00 3.67
2078 6304 1.442769 CTTCCTTGACATGACACCGG 58.557 55.000 0.00 0.00 0.00 5.28
2079 6305 0.605319 TTCCTTGACATGACACCGGC 60.605 55.000 0.00 0.00 0.00 6.13
2081 6307 2.358125 TTGACATGACACCGGCCG 60.358 61.111 21.04 21.04 0.00 6.13
2082 6308 3.892740 TTGACATGACACCGGCCGG 62.893 63.158 42.17 42.17 42.03 6.13
2086 6312 3.395702 ATGACACCGGCCGGCTTA 61.396 61.111 43.58 26.98 39.32 3.09
2087 6313 2.742116 ATGACACCGGCCGGCTTAT 61.742 57.895 43.58 27.94 39.32 1.73
2088 6314 1.404479 ATGACACCGGCCGGCTTATA 61.404 55.000 43.58 25.87 39.32 0.98
2089 6315 1.370064 GACACCGGCCGGCTTATAT 59.630 57.895 43.58 21.49 39.32 0.86
2090 6316 0.604578 GACACCGGCCGGCTTATATA 59.395 55.000 43.58 0.00 39.32 0.86
2091 6317 1.206371 GACACCGGCCGGCTTATATAT 59.794 52.381 43.58 19.78 39.32 0.86
2092 6318 2.428171 GACACCGGCCGGCTTATATATA 59.572 50.000 43.58 0.00 39.32 0.86
2093 6319 3.036091 ACACCGGCCGGCTTATATATAT 58.964 45.455 43.58 18.08 39.32 0.86
2094 6320 4.217510 ACACCGGCCGGCTTATATATATA 58.782 43.478 43.58 0.00 39.32 0.86
2095 6321 4.280174 ACACCGGCCGGCTTATATATATAG 59.720 45.833 43.58 15.48 39.32 1.31
2096 6322 4.521639 CACCGGCCGGCTTATATATATAGA 59.478 45.833 43.58 0.00 39.32 1.98
2097 6323 5.185249 CACCGGCCGGCTTATATATATAGAT 59.815 44.000 43.58 15.99 39.32 1.98
2098 6324 5.418209 ACCGGCCGGCTTATATATATAGATC 59.582 44.000 43.58 1.83 39.32 2.75
2099 6325 5.448768 CCGGCCGGCTTATATATATAGATCG 60.449 48.000 34.96 14.74 0.00 3.69
2100 6326 5.353400 CGGCCGGCTTATATATATAGATCGA 59.647 44.000 28.56 0.00 0.00 3.59
2101 6327 6.038382 CGGCCGGCTTATATATATAGATCGAT 59.962 42.308 28.56 0.00 0.00 3.59
2102 6328 7.419204 GGCCGGCTTATATATATAGATCGATC 58.581 42.308 28.56 17.91 0.00 3.69
2103 6329 7.419204 GCCGGCTTATATATATAGATCGATCC 58.581 42.308 22.15 4.34 0.00 3.36
2104 6330 7.067129 GCCGGCTTATATATATAGATCGATCCA 59.933 40.741 22.15 9.12 0.00 3.41
2105 6331 8.957466 CCGGCTTATATATATAGATCGATCCAA 58.043 37.037 21.66 10.98 0.00 3.53
2106 6332 9.995957 CGGCTTATATATATAGATCGATCCAAG 57.004 37.037 21.66 11.30 0.00 3.61
2114 6340 2.898705 AGATCGATCCAAGTTGTGAGC 58.101 47.619 21.66 1.19 0.00 4.26
2115 6341 2.234661 AGATCGATCCAAGTTGTGAGCA 59.765 45.455 21.66 0.00 0.00 4.26
2116 6342 2.768253 TCGATCCAAGTTGTGAGCAT 57.232 45.000 1.45 0.00 0.00 3.79
2117 6343 2.621338 TCGATCCAAGTTGTGAGCATC 58.379 47.619 1.45 0.00 0.00 3.91
2118 6344 2.234661 TCGATCCAAGTTGTGAGCATCT 59.765 45.455 1.45 0.00 34.92 2.90
2119 6345 2.350804 CGATCCAAGTTGTGAGCATCTG 59.649 50.000 1.45 0.00 34.92 2.90
2120 6346 2.936919 TCCAAGTTGTGAGCATCTGT 57.063 45.000 1.45 0.00 34.92 3.41
2121 6347 2.497138 TCCAAGTTGTGAGCATCTGTG 58.503 47.619 1.45 0.00 34.92 3.66
2136 6362 6.324522 GCATCTGTGCGTCATATTATAGTC 57.675 41.667 0.00 0.00 42.28 2.59
2137 6363 5.863935 GCATCTGTGCGTCATATTATAGTCA 59.136 40.000 0.00 0.00 42.28 3.41
2138 6364 6.034363 GCATCTGTGCGTCATATTATAGTCAG 59.966 42.308 0.00 0.00 42.28 3.51
2139 6365 6.635030 TCTGTGCGTCATATTATAGTCAGT 57.365 37.500 0.00 0.00 0.00 3.41
2140 6366 7.739498 TCTGTGCGTCATATTATAGTCAGTA 57.261 36.000 0.00 0.00 0.00 2.74
2141 6367 7.582352 TCTGTGCGTCATATTATAGTCAGTAC 58.418 38.462 0.00 0.00 0.00 2.73
2142 6368 6.368213 TGTGCGTCATATTATAGTCAGTACG 58.632 40.000 0.00 0.00 0.00 3.67
2143 6369 5.911615 GCGTCATATTATAGTCAGTACGC 57.088 43.478 0.00 0.00 44.94 4.42
2147 6373 8.754936 CGTCATATTATAGTCAGTACGCATAG 57.245 38.462 0.00 0.00 0.00 2.23
2148 6374 8.388853 CGTCATATTATAGTCAGTACGCATAGT 58.611 37.037 0.00 0.00 0.00 2.12
2164 6390 6.453092 ACGCATAGTACAATATGTAGGAACC 58.547 40.000 0.00 0.00 32.84 3.62
2165 6391 6.267014 ACGCATAGTACAATATGTAGGAACCT 59.733 38.462 0.00 0.00 32.84 3.50
2166 6392 6.807230 CGCATAGTACAATATGTAGGAACCTC 59.193 42.308 0.00 0.00 32.84 3.85
2167 6393 7.523216 CGCATAGTACAATATGTAGGAACCTCA 60.523 40.741 0.00 0.00 32.84 3.86
2168 6394 7.599245 GCATAGTACAATATGTAGGAACCTCAC 59.401 40.741 0.00 0.00 32.84 3.51
2169 6395 8.638873 CATAGTACAATATGTAGGAACCTCACA 58.361 37.037 0.00 1.70 32.84 3.58
2170 6396 7.490657 AGTACAATATGTAGGAACCTCACAA 57.509 36.000 0.00 0.00 32.84 3.33
2171 6397 7.556844 AGTACAATATGTAGGAACCTCACAAG 58.443 38.462 0.00 0.00 32.84 3.16
2172 6398 6.374417 ACAATATGTAGGAACCTCACAAGT 57.626 37.500 0.00 0.00 0.00 3.16
2173 6399 6.173339 ACAATATGTAGGAACCTCACAAGTG 58.827 40.000 0.00 0.00 0.00 3.16
2174 6400 6.173339 CAATATGTAGGAACCTCACAAGTGT 58.827 40.000 0.00 0.00 0.00 3.55
2175 6401 3.469008 TGTAGGAACCTCACAAGTGTG 57.531 47.619 5.02 5.02 46.91 3.82
2176 6402 2.769663 TGTAGGAACCTCACAAGTGTGT 59.230 45.455 11.06 0.39 45.76 3.72
2177 6403 3.962063 TGTAGGAACCTCACAAGTGTGTA 59.038 43.478 11.06 0.00 45.76 2.90
2178 6404 4.591498 TGTAGGAACCTCACAAGTGTGTAT 59.409 41.667 11.06 0.00 45.76 2.29
2179 6405 4.008074 AGGAACCTCACAAGTGTGTATG 57.992 45.455 11.06 4.22 45.76 2.39
2180 6406 3.646162 AGGAACCTCACAAGTGTGTATGA 59.354 43.478 11.06 0.00 45.76 2.15
2181 6407 3.997021 GGAACCTCACAAGTGTGTATGAG 59.003 47.826 11.06 1.71 45.76 2.90
2182 6408 3.045601 ACCTCACAAGTGTGTATGAGC 57.954 47.619 11.06 0.00 45.76 4.26
2183 6409 2.368548 ACCTCACAAGTGTGTATGAGCA 59.631 45.455 11.06 0.00 45.76 4.26
2184 6410 3.008375 ACCTCACAAGTGTGTATGAGCAT 59.992 43.478 11.06 0.00 45.76 3.79
2185 6411 4.005650 CCTCACAAGTGTGTATGAGCATT 58.994 43.478 11.06 0.00 45.76 3.56
2186 6412 5.178061 CCTCACAAGTGTGTATGAGCATTA 58.822 41.667 11.06 0.00 45.76 1.90
2187 6413 5.819379 CCTCACAAGTGTGTATGAGCATTAT 59.181 40.000 11.06 0.00 45.76 1.28
2188 6414 6.238293 CCTCACAAGTGTGTATGAGCATTATG 60.238 42.308 11.06 0.00 45.76 1.90
2189 6415 6.405538 TCACAAGTGTGTATGAGCATTATGA 58.594 36.000 11.06 0.00 45.76 2.15
2190 6416 6.878389 TCACAAGTGTGTATGAGCATTATGAA 59.122 34.615 11.06 0.00 45.76 2.57
2191 6417 7.064966 TCACAAGTGTGTATGAGCATTATGAAG 59.935 37.037 11.06 0.00 45.76 3.02
2192 6418 6.881065 ACAAGTGTGTATGAGCATTATGAAGT 59.119 34.615 0.00 0.00 35.72 3.01
2193 6419 8.040727 ACAAGTGTGTATGAGCATTATGAAGTA 58.959 33.333 0.00 0.00 35.72 2.24
2194 6420 8.331022 CAAGTGTGTATGAGCATTATGAAGTAC 58.669 37.037 0.00 0.00 0.00 2.73
2195 6421 7.555965 AGTGTGTATGAGCATTATGAAGTACA 58.444 34.615 0.00 0.00 0.00 2.90
2196 6422 7.492669 AGTGTGTATGAGCATTATGAAGTACAC 59.507 37.037 16.22 16.22 40.41 2.90
2197 6423 7.277760 GTGTGTATGAGCATTATGAAGTACACA 59.722 37.037 19.18 19.18 44.65 3.72
2198 6424 7.821846 TGTGTATGAGCATTATGAAGTACACAA 59.178 33.333 20.02 10.99 44.20 3.33
2199 6425 8.664798 GTGTATGAGCATTATGAAGTACACAAA 58.335 33.333 17.25 0.00 40.00 2.83
2200 6426 8.664798 TGTATGAGCATTATGAAGTACACAAAC 58.335 33.333 0.00 0.00 0.00 2.93
2201 6427 7.686438 ATGAGCATTATGAAGTACACAAACA 57.314 32.000 0.00 0.00 0.00 2.83
2202 6428 7.503521 TGAGCATTATGAAGTACACAAACAA 57.496 32.000 0.00 0.00 0.00 2.83
2203 6429 7.935520 TGAGCATTATGAAGTACACAAACAAA 58.064 30.769 0.00 0.00 0.00 2.83
2204 6430 8.409371 TGAGCATTATGAAGTACACAAACAAAA 58.591 29.630 0.00 0.00 0.00 2.44
2205 6431 8.574196 AGCATTATGAAGTACACAAACAAAAC 57.426 30.769 0.00 0.00 0.00 2.43
2206 6432 7.378461 AGCATTATGAAGTACACAAACAAAACG 59.622 33.333 0.00 0.00 0.00 3.60
2207 6433 7.166804 GCATTATGAAGTACACAAACAAAACGT 59.833 33.333 0.00 0.00 0.00 3.99
2208 6434 8.678510 CATTATGAAGTACACAAACAAAACGTC 58.321 33.333 0.00 0.00 0.00 4.34
2209 6435 4.639959 TGAAGTACACAAACAAAACGTCG 58.360 39.130 0.00 0.00 0.00 5.12
2210 6436 4.388165 TGAAGTACACAAACAAAACGTCGA 59.612 37.500 0.00 0.00 0.00 4.20
2211 6437 4.249181 AGTACACAAACAAAACGTCGAC 57.751 40.909 5.18 5.18 0.00 4.20
2212 6438 2.530832 ACACAAACAAAACGTCGACC 57.469 45.000 10.58 0.00 0.00 4.79
2213 6439 1.201943 ACACAAACAAAACGTCGACCG 60.202 47.619 10.58 7.90 44.03 4.79
2214 6440 1.060842 CACAAACAAAACGTCGACCGA 59.939 47.619 10.58 0.00 40.70 4.69
2215 6441 1.731160 ACAAACAAAACGTCGACCGAA 59.269 42.857 10.58 0.00 40.70 4.30
2216 6442 2.159234 ACAAACAAAACGTCGACCGAAA 59.841 40.909 10.58 0.00 40.70 3.46
2217 6443 3.181508 ACAAACAAAACGTCGACCGAAAT 60.182 39.130 10.58 0.00 40.70 2.17
2218 6444 2.656192 ACAAAACGTCGACCGAAATG 57.344 45.000 10.58 5.78 40.70 2.32
2219 6445 1.262151 ACAAAACGTCGACCGAAATGG 59.738 47.619 10.58 0.00 46.41 3.16
2220 6446 1.527736 CAAAACGTCGACCGAAATGGA 59.472 47.619 10.58 0.00 42.00 3.41
2221 6447 1.142474 AAACGTCGACCGAAATGGAC 58.858 50.000 10.58 0.00 42.00 4.02
2222 6448 0.032403 AACGTCGACCGAAATGGACA 59.968 50.000 10.58 0.00 42.00 4.02
2223 6449 0.032403 ACGTCGACCGAAATGGACAA 59.968 50.000 10.58 0.00 42.00 3.18
2224 6450 1.141645 CGTCGACCGAAATGGACAAA 58.858 50.000 10.58 0.00 42.00 2.83
2225 6451 1.126113 CGTCGACCGAAATGGACAAAG 59.874 52.381 10.58 0.00 42.00 2.77
2226 6452 2.409975 GTCGACCGAAATGGACAAAGA 58.590 47.619 3.51 0.00 42.00 2.52
2227 6453 2.803956 GTCGACCGAAATGGACAAAGAA 59.196 45.455 3.51 0.00 42.00 2.52
2228 6454 3.249080 GTCGACCGAAATGGACAAAGAAA 59.751 43.478 3.51 0.00 42.00 2.52
2229 6455 3.878103 TCGACCGAAATGGACAAAGAAAA 59.122 39.130 0.00 0.00 42.00 2.29
2230 6456 3.972502 CGACCGAAATGGACAAAGAAAAC 59.027 43.478 0.00 0.00 42.00 2.43
2231 6457 4.496673 CGACCGAAATGGACAAAGAAAACA 60.497 41.667 0.00 0.00 42.00 2.83
2232 6458 4.678622 ACCGAAATGGACAAAGAAAACAC 58.321 39.130 0.00 0.00 42.00 3.32
2233 6459 4.158764 ACCGAAATGGACAAAGAAAACACA 59.841 37.500 0.00 0.00 42.00 3.72
2234 6460 4.739716 CCGAAATGGACAAAGAAAACACAG 59.260 41.667 0.00 0.00 42.00 3.66
2235 6461 4.207019 CGAAATGGACAAAGAAAACACAGC 59.793 41.667 0.00 0.00 0.00 4.40
2236 6462 3.733443 ATGGACAAAGAAAACACAGCC 57.267 42.857 0.00 0.00 0.00 4.85
2237 6463 1.754226 TGGACAAAGAAAACACAGCCC 59.246 47.619 0.00 0.00 0.00 5.19
2238 6464 1.754226 GGACAAAGAAAACACAGCCCA 59.246 47.619 0.00 0.00 0.00 5.36
2239 6465 2.365293 GGACAAAGAAAACACAGCCCAT 59.635 45.455 0.00 0.00 0.00 4.00
2240 6466 3.181466 GGACAAAGAAAACACAGCCCATT 60.181 43.478 0.00 0.00 0.00 3.16
2241 6467 4.441792 GACAAAGAAAACACAGCCCATTT 58.558 39.130 0.00 0.00 0.00 2.32
2242 6468 4.190772 ACAAAGAAAACACAGCCCATTTG 58.809 39.130 0.00 0.00 33.70 2.32
2243 6469 2.531522 AGAAAACACAGCCCATTTGC 57.468 45.000 0.00 0.00 0.00 3.68
2244 6470 1.139163 GAAAACACAGCCCATTTGCG 58.861 50.000 0.00 0.00 36.02 4.85
2245 6471 0.749649 AAAACACAGCCCATTTGCGA 59.250 45.000 0.00 0.00 36.02 5.10
2246 6472 0.749649 AAACACAGCCCATTTGCGAA 59.250 45.000 0.00 0.00 36.02 4.70
2247 6473 0.968405 AACACAGCCCATTTGCGAAT 59.032 45.000 0.00 0.00 36.02 3.34
2248 6474 0.244450 ACACAGCCCATTTGCGAATG 59.756 50.000 18.39 18.39 41.87 2.67
2258 6484 4.131202 CATTTGCGAATGGTTTGGTTTG 57.869 40.909 17.69 0.00 39.17 2.93
2259 6485 3.526931 TTTGCGAATGGTTTGGTTTGA 57.473 38.095 0.00 0.00 0.00 2.69
2260 6486 2.500509 TGCGAATGGTTTGGTTTGAC 57.499 45.000 0.00 0.00 0.00 3.18
2261 6487 1.751351 TGCGAATGGTTTGGTTTGACA 59.249 42.857 0.00 0.00 0.00 3.58
2262 6488 2.124122 GCGAATGGTTTGGTTTGACAC 58.876 47.619 0.00 0.00 0.00 3.67
2263 6489 2.223711 GCGAATGGTTTGGTTTGACACT 60.224 45.455 0.00 0.00 0.00 3.55
2264 6490 3.003897 GCGAATGGTTTGGTTTGACACTA 59.996 43.478 0.00 0.00 0.00 2.74
2265 6491 4.533222 CGAATGGTTTGGTTTGACACTAC 58.467 43.478 0.00 0.00 0.00 2.73
2266 6492 4.555906 CGAATGGTTTGGTTTGACACTACC 60.556 45.833 0.00 0.00 34.93 3.18
2267 6493 2.290464 TGGTTTGGTTTGACACTACCG 58.710 47.619 2.40 0.00 37.23 4.02
2268 6494 2.093075 TGGTTTGGTTTGACACTACCGA 60.093 45.455 2.40 0.00 37.23 4.69
2269 6495 3.143728 GGTTTGGTTTGACACTACCGAT 58.856 45.455 2.40 0.00 37.23 4.18
2270 6496 4.202336 TGGTTTGGTTTGACACTACCGATA 60.202 41.667 2.40 0.00 37.23 2.92
2271 6497 4.390909 GGTTTGGTTTGACACTACCGATAG 59.609 45.833 2.40 0.00 37.23 2.08
2287 6513 4.916983 CGATAGGGATGCAAATTTGGAA 57.083 40.909 16.71 0.00 30.51 3.53
2288 6514 4.610945 CGATAGGGATGCAAATTTGGAAC 58.389 43.478 16.71 13.58 30.51 3.62
2289 6515 4.499696 CGATAGGGATGCAAATTTGGAACC 60.500 45.833 24.91 24.91 40.04 3.62
2290 6516 2.906568 AGGGATGCAAATTTGGAACCT 58.093 42.857 29.24 26.66 40.49 3.50
2291 6517 2.833943 AGGGATGCAAATTTGGAACCTC 59.166 45.455 29.24 21.60 40.49 3.85
2292 6518 2.566724 GGGATGCAAATTTGGAACCTCA 59.433 45.455 29.24 15.16 40.49 3.86
2293 6519 3.007831 GGGATGCAAATTTGGAACCTCAA 59.992 43.478 29.24 3.48 40.49 3.02
2294 6520 3.996363 GGATGCAAATTTGGAACCTCAAC 59.004 43.478 25.41 10.93 38.21 3.18
2295 6521 3.467374 TGCAAATTTGGAACCTCAACC 57.533 42.857 19.47 0.00 0.00 3.77
2296 6522 2.103941 TGCAAATTTGGAACCTCAACCC 59.896 45.455 19.47 0.00 0.00 4.11
2297 6523 2.368548 GCAAATTTGGAACCTCAACCCT 59.631 45.455 19.47 0.00 0.00 4.34
2298 6524 3.554960 GCAAATTTGGAACCTCAACCCTC 60.555 47.826 19.47 0.00 0.00 4.30
2299 6525 2.604912 ATTTGGAACCTCAACCCTCC 57.395 50.000 0.00 0.00 0.00 4.30
2300 6526 1.227249 TTTGGAACCTCAACCCTCCA 58.773 50.000 0.00 0.00 36.16 3.86
2301 6527 1.227249 TTGGAACCTCAACCCTCCAA 58.773 50.000 0.00 0.00 43.91 3.53
2302 6528 0.476771 TGGAACCTCAACCCTCCAAC 59.523 55.000 0.00 0.00 35.02 3.77
2303 6529 0.251209 GGAACCTCAACCCTCCAACC 60.251 60.000 0.00 0.00 0.00 3.77
2304 6530 0.251209 GAACCTCAACCCTCCAACCC 60.251 60.000 0.00 0.00 0.00 4.11
2305 6531 0.701310 AACCTCAACCCTCCAACCCT 60.701 55.000 0.00 0.00 0.00 4.34
2306 6532 1.134438 ACCTCAACCCTCCAACCCTC 61.134 60.000 0.00 0.00 0.00 4.30
2307 6533 0.842467 CCTCAACCCTCCAACCCTCT 60.842 60.000 0.00 0.00 0.00 3.69
2308 6534 1.068121 CTCAACCCTCCAACCCTCTT 58.932 55.000 0.00 0.00 0.00 2.85
2309 6535 1.425448 CTCAACCCTCCAACCCTCTTT 59.575 52.381 0.00 0.00 0.00 2.52
2310 6536 2.642807 CTCAACCCTCCAACCCTCTTTA 59.357 50.000 0.00 0.00 0.00 1.85
2311 6537 2.642807 TCAACCCTCCAACCCTCTTTAG 59.357 50.000 0.00 0.00 0.00 1.85
2312 6538 2.375509 CAACCCTCCAACCCTCTTTAGT 59.624 50.000 0.00 0.00 0.00 2.24
2313 6539 2.714808 ACCCTCCAACCCTCTTTAGTT 58.285 47.619 0.00 0.00 0.00 2.24
2314 6540 2.375509 ACCCTCCAACCCTCTTTAGTTG 59.624 50.000 0.00 0.00 42.41 3.16
2315 6541 2.642807 CCCTCCAACCCTCTTTAGTTGA 59.357 50.000 4.52 0.00 44.93 3.18
2316 6542 3.073946 CCCTCCAACCCTCTTTAGTTGAA 59.926 47.826 4.52 0.00 44.93 2.69
2317 6543 4.327680 CCTCCAACCCTCTTTAGTTGAAG 58.672 47.826 4.52 0.00 44.93 3.02
2318 6544 4.202472 CCTCCAACCCTCTTTAGTTGAAGT 60.202 45.833 4.52 0.00 44.93 3.01
2319 6545 5.012768 CCTCCAACCCTCTTTAGTTGAAGTA 59.987 44.000 4.52 0.00 44.93 2.24
2320 6546 6.465321 CCTCCAACCCTCTTTAGTTGAAGTAA 60.465 42.308 4.52 0.00 44.93 2.24
2321 6547 6.902408 TCCAACCCTCTTTAGTTGAAGTAAA 58.098 36.000 5.22 5.22 44.93 2.01
2322 6548 6.996282 TCCAACCCTCTTTAGTTGAAGTAAAG 59.004 38.462 21.01 21.01 44.93 1.85
2323 6549 6.771267 CCAACCCTCTTTAGTTGAAGTAAAGT 59.229 38.462 24.16 9.73 44.93 2.66
2324 6550 7.935210 CCAACCCTCTTTAGTTGAAGTAAAGTA 59.065 37.037 24.16 14.27 44.93 2.24
2325 6551 9.333724 CAACCCTCTTTAGTTGAAGTAAAGTAA 57.666 33.333 24.16 11.20 44.93 2.24
2326 6552 9.910267 AACCCTCTTTAGTTGAAGTAAAGTAAA 57.090 29.630 24.16 10.66 40.35 2.01
2464 6694 1.747355 GCTAAGATGCACACAGCCAAT 59.253 47.619 0.00 0.00 44.83 3.16
2471 6705 0.243636 GCACACAGCCAATACCAACC 59.756 55.000 0.00 0.00 37.23 3.77
2477 6713 0.608035 AGCCAATACCAACCCACACG 60.608 55.000 0.00 0.00 0.00 4.49
2520 6763 9.686683 AATAGCAAAGTCATATAAGACCAAAGT 57.313 29.630 4.52 0.00 39.34 2.66
2521 6764 7.617041 AGCAAAGTCATATAAGACCAAAGTC 57.383 36.000 4.52 0.00 43.89 3.01
2537 6780 5.188434 CCAAAGTCATGCCTAAATGAGAGA 58.812 41.667 0.00 0.00 37.24 3.10
2567 6811 7.712264 AAAAATCAAATCGAACAAATCTGCA 57.288 28.000 0.00 0.00 0.00 4.41
2595 6842 6.402766 CGACAAAATACAACAACCATATCCGT 60.403 38.462 0.00 0.00 0.00 4.69
2596 6847 6.616947 ACAAAATACAACAACCATATCCGTG 58.383 36.000 0.00 0.00 0.00 4.94
2707 6959 1.909700 TCCAACCATCAAAGGTCAGC 58.090 50.000 0.00 0.00 42.25 4.26
2859 7117 3.177228 AGACCAGGTACTTGAGAAGCAT 58.823 45.455 6.55 0.00 34.60 3.79
2945 7203 3.460648 GCTAGAAAGCCGACCATGT 57.539 52.632 0.00 0.00 43.40 3.21
2946 7204 1.009829 GCTAGAAAGCCGACCATGTG 58.990 55.000 0.00 0.00 43.40 3.21
2947 7205 1.656652 CTAGAAAGCCGACCATGTGG 58.343 55.000 0.00 0.00 42.17 4.17
2960 7218 1.203052 CCATGTGGTGGTCATTTCTGC 59.797 52.381 0.00 0.00 43.44 4.26
2961 7219 2.165167 CATGTGGTGGTCATTTCTGCT 58.835 47.619 0.00 0.00 0.00 4.24
2962 7220 1.608055 TGTGGTGGTCATTTCTGCTG 58.392 50.000 0.00 0.00 0.00 4.41
2963 7221 0.883833 GTGGTGGTCATTTCTGCTGG 59.116 55.000 0.00 0.00 0.00 4.85
2964 7222 0.770499 TGGTGGTCATTTCTGCTGGA 59.230 50.000 0.00 0.00 0.00 3.86
2965 7223 1.144708 TGGTGGTCATTTCTGCTGGAA 59.855 47.619 0.00 0.00 0.00 3.53
2966 7224 2.238521 GGTGGTCATTTCTGCTGGAAA 58.761 47.619 7.61 7.61 46.33 3.13
2967 7225 2.029918 GGTGGTCATTTCTGCTGGAAAC 60.030 50.000 7.39 0.00 45.29 2.78
2968 7226 2.622942 GTGGTCATTTCTGCTGGAAACA 59.377 45.455 7.39 0.65 45.29 2.83
2979 7237 3.514777 TGGAAACAGCTAGAGCACG 57.485 52.632 4.01 0.00 45.16 5.34
2980 7238 0.966179 TGGAAACAGCTAGAGCACGA 59.034 50.000 4.01 0.00 45.16 4.35
2981 7239 1.336887 TGGAAACAGCTAGAGCACGAC 60.337 52.381 4.01 0.00 45.16 4.34
2982 7240 1.351153 GAAACAGCTAGAGCACGACC 58.649 55.000 4.01 0.00 45.16 4.79
2983 7241 0.388649 AAACAGCTAGAGCACGACCG 60.389 55.000 4.01 0.00 45.16 4.79
2984 7242 1.241990 AACAGCTAGAGCACGACCGA 61.242 55.000 4.01 0.00 45.16 4.69
2985 7243 1.241990 ACAGCTAGAGCACGACCGAA 61.242 55.000 4.01 0.00 45.16 4.30
2986 7244 0.109272 CAGCTAGAGCACGACCGAAA 60.109 55.000 4.01 0.00 45.16 3.46
2987 7245 0.109226 AGCTAGAGCACGACCGAAAC 60.109 55.000 4.01 0.00 45.16 2.78
2988 7246 1.077089 GCTAGAGCACGACCGAAACC 61.077 60.000 0.00 0.00 41.59 3.27
2989 7247 0.242825 CTAGAGCACGACCGAAACCA 59.757 55.000 0.00 0.00 0.00 3.67
2990 7248 0.242825 TAGAGCACGACCGAAACCAG 59.757 55.000 0.00 0.00 0.00 4.00
2991 7249 1.300697 GAGCACGACCGAAACCAGT 60.301 57.895 0.00 0.00 0.00 4.00
2992 7250 0.038892 GAGCACGACCGAAACCAGTA 60.039 55.000 0.00 0.00 0.00 2.74
2993 7251 0.319297 AGCACGACCGAAACCAGTAC 60.319 55.000 0.00 0.00 0.00 2.73
2994 7252 0.319297 GCACGACCGAAACCAGTACT 60.319 55.000 0.00 0.00 0.00 2.73
2995 7253 1.415374 CACGACCGAAACCAGTACTG 58.585 55.000 16.34 16.34 0.00 2.74
2996 7254 0.319297 ACGACCGAAACCAGTACTGC 60.319 55.000 17.86 2.74 0.00 4.40
2997 7255 0.038526 CGACCGAAACCAGTACTGCT 60.039 55.000 17.86 0.18 0.00 4.24
2998 7256 1.200716 CGACCGAAACCAGTACTGCTA 59.799 52.381 17.86 0.00 0.00 3.49
2999 7257 2.731341 CGACCGAAACCAGTACTGCTAG 60.731 54.545 17.86 6.71 0.00 3.42
3000 7258 1.067071 ACCGAAACCAGTACTGCTAGC 60.067 52.381 17.86 8.10 0.00 3.42
3001 7259 1.067142 CCGAAACCAGTACTGCTAGCA 60.067 52.381 18.22 18.22 0.00 3.49
3002 7260 1.993370 CGAAACCAGTACTGCTAGCAC 59.007 52.381 14.93 4.26 0.00 4.40
3003 7261 2.352814 CGAAACCAGTACTGCTAGCACT 60.353 50.000 14.93 6.94 0.00 4.40
3004 7262 3.665190 GAAACCAGTACTGCTAGCACTT 58.335 45.455 14.93 6.31 0.00 3.16
3005 7263 3.320673 AACCAGTACTGCTAGCACTTC 57.679 47.619 14.93 6.74 0.00 3.01
3006 7264 2.530701 ACCAGTACTGCTAGCACTTCT 58.469 47.619 14.93 9.02 0.00 2.85
3007 7265 2.900546 ACCAGTACTGCTAGCACTTCTT 59.099 45.455 14.93 0.00 0.00 2.52
3008 7266 3.257393 CCAGTACTGCTAGCACTTCTTG 58.743 50.000 14.93 5.51 0.00 3.02
3009 7267 3.056536 CCAGTACTGCTAGCACTTCTTGA 60.057 47.826 14.93 0.00 0.00 3.02
3010 7268 4.382470 CCAGTACTGCTAGCACTTCTTGAT 60.382 45.833 14.93 0.00 0.00 2.57
3011 7269 5.174395 CAGTACTGCTAGCACTTCTTGATT 58.826 41.667 14.93 0.00 0.00 2.57
3012 7270 5.641209 CAGTACTGCTAGCACTTCTTGATTT 59.359 40.000 14.93 0.00 0.00 2.17
3013 7271 6.148480 CAGTACTGCTAGCACTTCTTGATTTT 59.852 38.462 14.93 0.00 0.00 1.82
3014 7272 5.368256 ACTGCTAGCACTTCTTGATTTTG 57.632 39.130 14.93 1.47 0.00 2.44
3015 7273 4.823989 ACTGCTAGCACTTCTTGATTTTGT 59.176 37.500 14.93 2.18 0.00 2.83
3016 7274 5.300286 ACTGCTAGCACTTCTTGATTTTGTT 59.700 36.000 14.93 0.00 0.00 2.83
3017 7275 6.147864 TGCTAGCACTTCTTGATTTTGTTT 57.852 33.333 14.93 0.00 0.00 2.83
3018 7276 6.572519 TGCTAGCACTTCTTGATTTTGTTTT 58.427 32.000 14.93 0.00 0.00 2.43
3019 7277 6.476380 TGCTAGCACTTCTTGATTTTGTTTTG 59.524 34.615 14.93 0.00 0.00 2.44
3020 7278 6.476706 GCTAGCACTTCTTGATTTTGTTTTGT 59.523 34.615 10.63 0.00 0.00 2.83
3021 7279 7.010460 GCTAGCACTTCTTGATTTTGTTTTGTT 59.990 33.333 10.63 0.00 0.00 2.83
3022 7280 7.671495 AGCACTTCTTGATTTTGTTTTGTTT 57.329 28.000 0.00 0.00 0.00 2.83
3023 7281 7.742151 AGCACTTCTTGATTTTGTTTTGTTTC 58.258 30.769 0.00 0.00 0.00 2.78
3024 7282 7.603784 AGCACTTCTTGATTTTGTTTTGTTTCT 59.396 29.630 0.00 0.00 0.00 2.52
3025 7283 7.689400 GCACTTCTTGATTTTGTTTTGTTTCTG 59.311 33.333 0.00 0.00 0.00 3.02
3026 7284 8.924691 CACTTCTTGATTTTGTTTTGTTTCTGA 58.075 29.630 0.00 0.00 0.00 3.27
3027 7285 9.657419 ACTTCTTGATTTTGTTTTGTTTCTGAT 57.343 25.926 0.00 0.00 0.00 2.90
3033 7291 9.474920 TGATTTTGTTTTGTTTCTGATATGACC 57.525 29.630 0.00 0.00 0.00 4.02
3034 7292 9.474920 GATTTTGTTTTGTTTCTGATATGACCA 57.525 29.630 0.00 0.00 0.00 4.02
3035 7293 9.829507 ATTTTGTTTTGTTTCTGATATGACCAA 57.170 25.926 0.00 0.00 0.00 3.67
3036 7294 8.641499 TTTGTTTTGTTTCTGATATGACCAAC 57.359 30.769 0.00 0.00 0.00 3.77
3037 7295 7.340122 TGTTTTGTTTCTGATATGACCAACA 57.660 32.000 0.00 0.00 0.00 3.33
3038 7296 7.424803 TGTTTTGTTTCTGATATGACCAACAG 58.575 34.615 0.00 0.00 0.00 3.16
3039 7297 7.068103 TGTTTTGTTTCTGATATGACCAACAGT 59.932 33.333 0.00 0.00 0.00 3.55
3040 7298 6.558771 TTGTTTCTGATATGACCAACAGTG 57.441 37.500 0.00 0.00 0.00 3.66
3041 7299 5.863965 TGTTTCTGATATGACCAACAGTGA 58.136 37.500 0.00 0.00 0.00 3.41
3042 7300 6.295249 TGTTTCTGATATGACCAACAGTGAA 58.705 36.000 0.00 0.00 0.00 3.18
3043 7301 6.427853 TGTTTCTGATATGACCAACAGTGAAG 59.572 38.462 0.00 0.00 0.00 3.02
3044 7302 5.745312 TCTGATATGACCAACAGTGAAGT 57.255 39.130 0.00 0.00 0.00 3.01
3045 7303 6.114187 TCTGATATGACCAACAGTGAAGTT 57.886 37.500 0.00 0.00 0.00 2.66
3046 7304 6.533730 TCTGATATGACCAACAGTGAAGTTT 58.466 36.000 0.00 0.00 0.00 2.66
3047 7305 6.650807 TCTGATATGACCAACAGTGAAGTTTC 59.349 38.462 0.00 0.00 0.00 2.78
3048 7306 6.295249 TGATATGACCAACAGTGAAGTTTCA 58.705 36.000 0.00 0.00 34.20 2.69
3059 7317 3.943671 TGAAGTTTCACCCTGAAGGAA 57.056 42.857 0.00 0.00 37.70 3.36
3060 7318 3.551846 TGAAGTTTCACCCTGAAGGAAC 58.448 45.455 0.00 0.00 37.70 3.62
3061 7319 2.658807 AGTTTCACCCTGAAGGAACC 57.341 50.000 0.00 0.00 37.70 3.62
3062 7320 1.850345 AGTTTCACCCTGAAGGAACCA 59.150 47.619 0.00 0.00 37.70 3.67
3063 7321 1.954382 GTTTCACCCTGAAGGAACCAC 59.046 52.381 0.00 0.00 37.70 4.16
3064 7322 1.217916 TTCACCCTGAAGGAACCACA 58.782 50.000 0.00 0.00 39.89 4.17
3065 7323 0.472471 TCACCCTGAAGGAACCACAC 59.528 55.000 0.00 0.00 39.89 3.82
3066 7324 0.474184 CACCCTGAAGGAACCACACT 59.526 55.000 0.00 0.00 39.89 3.55
3067 7325 1.697432 CACCCTGAAGGAACCACACTA 59.303 52.381 0.00 0.00 39.89 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 0.250234 CCTCGAGGGAGTTGCATCAA 59.750 55.000 24.62 0.00 38.70 2.57
33 34 1.123077 TCAACCATCATCCTCGAGGG 58.877 55.000 30.80 16.22 42.62 4.30
52 53 3.775261 ACAAAGGGCATTGCAAAGATT 57.225 38.095 11.39 0.00 33.52 2.40
75 76 1.418264 TCGTGTGGGATGAAAAGGTCA 59.582 47.619 0.00 0.00 41.67 4.02
76 77 1.804748 GTCGTGTGGGATGAAAAGGTC 59.195 52.381 0.00 0.00 0.00 3.85
80 81 3.485463 AGAAGTCGTGTGGGATGAAAA 57.515 42.857 0.00 0.00 0.00 2.29
90 91 3.118371 ACTGGAAAAGGAAGAAGTCGTGT 60.118 43.478 0.00 0.00 0.00 4.49
93 94 2.224314 GCACTGGAAAAGGAAGAAGTCG 59.776 50.000 0.00 0.00 0.00 4.18
111 113 5.565592 TTGGATCAACTGATTACATGCAC 57.434 39.130 0.00 0.00 34.37 4.57
113 115 4.096833 TGCTTGGATCAACTGATTACATGC 59.903 41.667 18.70 18.70 39.86 4.06
149 151 4.227864 AGGGGTCTGATTGAAGAATGAC 57.772 45.455 0.00 0.00 0.00 3.06
156 158 4.689062 AGAGACTAAGGGGTCTGATTGAA 58.311 43.478 1.71 0.00 45.32 2.69
169 171 4.396478 TGATGAAGACACCGAGAGACTAAG 59.604 45.833 0.00 0.00 0.00 2.18
171 173 3.951663 TGATGAAGACACCGAGAGACTA 58.048 45.455 0.00 0.00 0.00 2.59
174 176 3.118992 CCAATGATGAAGACACCGAGAGA 60.119 47.826 0.00 0.00 0.00 3.10
188 190 3.055675 ACATTTGAGGCAACCCAATGATG 60.056 43.478 7.45 0.00 37.17 3.07
200 202 1.336755 ACGAACCACAACATTTGAGGC 59.663 47.619 2.65 0.00 44.09 4.70
206 208 4.174009 CGAGATCTACGAACCACAACATT 58.826 43.478 0.00 0.00 0.00 2.71
222 224 1.293924 CACAAGCCATGACCGAGATC 58.706 55.000 0.00 0.00 0.00 2.75
229 231 3.425359 CGAAGATTCACACAAGCCATGAC 60.425 47.826 0.00 0.00 0.00 3.06
272 274 3.000727 GACTACGTCAACATTGGGGAAG 58.999 50.000 0.00 0.00 32.09 3.46
284 286 1.203758 ACGCCATTGATGACTACGTCA 59.796 47.619 0.00 0.00 46.90 4.35
339 341 4.202357 TGTCCTTTGATGAAGTGTGTAGCT 60.202 41.667 0.00 0.00 33.29 3.32
378 380 6.398918 GTCTAAACTGAGAAGGAGTGCATTA 58.601 40.000 0.00 0.00 0.00 1.90
400 402 1.909302 TGAGGGTCAAGATCCTTGGTC 59.091 52.381 2.91 0.00 43.34 4.02
477 479 7.708752 ACTCAATTTTTATTTTTGCTCGGTCAA 59.291 29.630 0.00 0.00 0.00 3.18
482 484 7.382218 AGGTGACTCAATTTTTATTTTTGCTCG 59.618 33.333 0.00 0.00 32.90 5.03
500 503 6.451393 CCTTTAGCTATATGTCAGGTGACTC 58.549 44.000 11.31 0.00 44.99 3.36
534 537 5.231147 GTCACGAAATTTTGCAACAAGCTAA 59.769 36.000 0.00 0.00 45.94 3.09
541 544 4.849111 TTTGGTCACGAAATTTTGCAAC 57.151 36.364 0.00 4.12 0.00 4.17
567 570 2.839486 TCTGCACACCTTTCTCGAAT 57.161 45.000 0.00 0.00 0.00 3.34
568 571 2.613026 TTCTGCACACCTTTCTCGAA 57.387 45.000 0.00 0.00 0.00 3.71
569 572 2.839486 ATTCTGCACACCTTTCTCGA 57.161 45.000 0.00 0.00 0.00 4.04
570 573 3.665323 CGAAATTCTGCACACCTTTCTCG 60.665 47.826 0.00 0.00 0.00 4.04
571 574 3.251004 ACGAAATTCTGCACACCTTTCTC 59.749 43.478 0.00 0.00 0.00 2.87
572 575 3.003689 CACGAAATTCTGCACACCTTTCT 59.996 43.478 0.00 0.00 0.00 2.52
573 576 3.003275 TCACGAAATTCTGCACACCTTTC 59.997 43.478 0.00 0.00 0.00 2.62
574 577 2.948979 TCACGAAATTCTGCACACCTTT 59.051 40.909 0.00 0.00 0.00 3.11
575 578 2.290641 GTCACGAAATTCTGCACACCTT 59.709 45.455 0.00 0.00 0.00 3.50
576 579 1.873591 GTCACGAAATTCTGCACACCT 59.126 47.619 0.00 0.00 0.00 4.00
577 580 1.069227 GGTCACGAAATTCTGCACACC 60.069 52.381 0.00 0.00 0.00 4.16
578 581 1.601903 TGGTCACGAAATTCTGCACAC 59.398 47.619 0.00 0.00 0.00 3.82
579 582 1.960417 TGGTCACGAAATTCTGCACA 58.040 45.000 0.00 0.00 0.00 4.57
580 583 3.347958 TTTGGTCACGAAATTCTGCAC 57.652 42.857 0.00 0.00 0.00 4.57
581 584 5.335583 CCTTATTTGGTCACGAAATTCTGCA 60.336 40.000 2.83 0.00 0.00 4.41
582 585 5.095490 CCTTATTTGGTCACGAAATTCTGC 58.905 41.667 2.83 0.00 0.00 4.26
583 586 6.254281 ACCTTATTTGGTCACGAAATTCTG 57.746 37.500 2.83 0.00 34.86 3.02
584 587 6.348213 CGAACCTTATTTGGTCACGAAATTCT 60.348 38.462 2.83 0.00 39.83 2.40
585 588 5.793457 CGAACCTTATTTGGTCACGAAATTC 59.207 40.000 2.83 0.00 39.83 2.17
590 593 3.006110 ACTCGAACCTTATTTGGTCACGA 59.994 43.478 12.34 12.34 41.98 4.35
604 607 3.447944 AGACTGGATTTCCTACTCGAACC 59.552 47.826 0.00 0.00 36.82 3.62
624 627 9.236006 ACCTCACGTATTAGTTAAGACTTAAGA 57.764 33.333 10.09 0.00 37.33 2.10
625 628 9.852091 AACCTCACGTATTAGTTAAGACTTAAG 57.148 33.333 7.93 0.00 37.33 1.85
626 629 9.846248 GAACCTCACGTATTAGTTAAGACTTAA 57.154 33.333 3.44 3.44 37.33 1.85
627 630 9.013229 TGAACCTCACGTATTAGTTAAGACTTA 57.987 33.333 0.00 0.00 37.33 2.24
628 631 7.889469 TGAACCTCACGTATTAGTTAAGACTT 58.111 34.615 0.00 0.00 37.33 3.01
629 632 7.392673 TCTGAACCTCACGTATTAGTTAAGACT 59.607 37.037 0.00 0.00 39.97 3.24
630 633 7.533426 TCTGAACCTCACGTATTAGTTAAGAC 58.467 38.462 0.00 0.00 0.00 3.01
693 4895 5.408909 TCCTCTATTCTATACAGAACGAGCG 59.591 44.000 6.44 0.00 43.50 5.03
711 4913 1.413118 TCATCTGCCGCATTCCTCTA 58.587 50.000 0.00 0.00 0.00 2.43
712 4914 0.543277 TTCATCTGCCGCATTCCTCT 59.457 50.000 0.00 0.00 0.00 3.69
713 4915 0.942962 CTTCATCTGCCGCATTCCTC 59.057 55.000 0.00 0.00 0.00 3.71
714 4916 0.543277 TCTTCATCTGCCGCATTCCT 59.457 50.000 0.00 0.00 0.00 3.36
715 4917 1.382522 TTCTTCATCTGCCGCATTCC 58.617 50.000 0.00 0.00 0.00 3.01
808 5010 3.941035 GCAAATATGGCGCCATGC 58.059 55.556 44.59 37.40 45.38 4.06
819 5021 1.467204 CGGAGCAATGCAACGCAAATA 60.467 47.619 8.35 0.00 43.62 1.40
873 5075 0.558220 ACGATGGATCTGGGAGGAGA 59.442 55.000 0.00 0.00 0.00 3.71
874 5076 2.294449 TACGATGGATCTGGGAGGAG 57.706 55.000 0.00 0.00 0.00 3.69
875 5077 4.397919 TTATACGATGGATCTGGGAGGA 57.602 45.455 0.00 0.00 0.00 3.71
878 5080 7.733773 ACATATTTATACGATGGATCTGGGA 57.266 36.000 0.00 0.00 0.00 4.37
881 5083 8.474831 TGGGTACATATTTATACGATGGATCTG 58.525 37.037 0.00 0.00 0.00 2.90
882 5084 8.603898 TGGGTACATATTTATACGATGGATCT 57.396 34.615 0.00 0.00 0.00 2.75
883 5085 9.261180 CATGGGTACATATTTATACGATGGATC 57.739 37.037 0.00 0.00 34.99 3.36
885 5087 7.561251 CCATGGGTACATATTTATACGATGGA 58.439 38.462 2.85 0.00 35.72 3.41
886 5088 6.260050 GCCATGGGTACATATTTATACGATGG 59.740 42.308 15.13 10.53 36.24 3.51
899 5119 1.146359 AGATGCATGCCATGGGTACAT 59.854 47.619 16.68 5.65 37.99 2.29
908 5133 3.691118 GTGTTAGAAGAAGATGCATGCCA 59.309 43.478 16.68 3.52 0.00 4.92
909 5134 3.065925 GGTGTTAGAAGAAGATGCATGCC 59.934 47.826 16.68 0.00 0.00 4.40
918 5143 1.275291 TCCGGCTGGTGTTAGAAGAAG 59.725 52.381 12.43 0.00 36.30 2.85
959 5185 5.472478 ACTGTGTATGTCTACTTCTTCACGA 59.528 40.000 0.00 0.00 0.00 4.35
963 5189 4.559251 CGCACTGTGTATGTCTACTTCTTC 59.441 45.833 9.86 0.00 0.00 2.87
1113 5339 3.966543 AGGAACCCCACCTTGGCG 61.967 66.667 0.00 0.00 35.79 5.69
1368 5594 1.374758 GCAGGAGGAGGTGAACACG 60.375 63.158 0.00 0.00 0.00 4.49
1398 5624 3.998672 ACGTGGTGGTGCCGGTAG 61.999 66.667 1.90 0.00 41.21 3.18
1662 5888 0.752054 TCGTCGTGTTGGGGTACTTT 59.248 50.000 0.00 0.00 0.00 2.66
1671 5897 1.670971 CGAACCCGATCGTCGTGTTG 61.671 60.000 15.09 0.00 40.32 3.33
1680 5906 2.431942 ACGTGCACGAACCCGATC 60.432 61.111 42.94 0.00 43.02 3.69
1855 6081 9.674068 CCATGAGTTACTATACATCTAGAGCTA 57.326 37.037 0.00 0.00 0.00 3.32
1856 6082 8.387039 TCCATGAGTTACTATACATCTAGAGCT 58.613 37.037 0.00 0.00 0.00 4.09
1869 6095 6.829849 TGAATGATGCATCCATGAGTTACTA 58.170 36.000 23.67 0.71 0.00 1.82
1870 6096 5.687780 TGAATGATGCATCCATGAGTTACT 58.312 37.500 23.67 1.41 0.00 2.24
1871 6097 6.379386 CATGAATGATGCATCCATGAGTTAC 58.621 40.000 27.21 10.85 37.41 2.50
1872 6098 5.475564 CCATGAATGATGCATCCATGAGTTA 59.524 40.000 30.35 12.18 37.41 2.24
1888 6114 1.105457 ATGTCCCAACGCCATGAATG 58.895 50.000 0.00 0.00 0.00 2.67
1890 6116 0.887247 CAATGTCCCAACGCCATGAA 59.113 50.000 0.00 0.00 0.00 2.57
1905 6131 2.286831 GCTGCACCTGATCGATTCAATG 60.287 50.000 0.00 0.00 32.78 2.82
1938 6164 1.069765 CTTGTGTGCCCTGTCGTCT 59.930 57.895 0.00 0.00 0.00 4.18
1950 6176 0.392706 TGCTCGTGTCCATCTTGTGT 59.607 50.000 0.00 0.00 0.00 3.72
1986 6212 1.958288 TGGAGAGGAAAGGAGGGAAG 58.042 55.000 0.00 0.00 0.00 3.46
1995 6221 1.956869 TCTGCTGGATGGAGAGGAAA 58.043 50.000 0.00 0.00 38.24 3.13
2052 6278 1.556911 TCATGTCAAGGAAGGAGGAGC 59.443 52.381 0.00 0.00 0.00 4.70
2055 6281 2.616510 GGTGTCATGTCAAGGAAGGAGG 60.617 54.545 0.00 0.00 0.00 4.30
2058 6284 1.442769 CGGTGTCATGTCAAGGAAGG 58.557 55.000 0.00 0.00 0.00 3.46
2075 6301 5.448768 CGATCTATATATATAAGCCGGCCGG 60.449 48.000 40.26 40.26 38.57 6.13
2078 6304 7.067129 TGGATCGATCTATATATATAAGCCGGC 59.933 40.741 21.89 21.89 0.00 6.13
2079 6305 8.507524 TGGATCGATCTATATATATAAGCCGG 57.492 38.462 23.96 0.00 0.00 6.13
2088 6314 8.194104 GCTCACAACTTGGATCGATCTATATAT 58.806 37.037 23.96 5.05 0.00 0.86
2089 6315 7.176690 TGCTCACAACTTGGATCGATCTATATA 59.823 37.037 23.96 3.50 0.00 0.86
2090 6316 6.015095 TGCTCACAACTTGGATCGATCTATAT 60.015 38.462 23.96 7.36 0.00 0.86
2091 6317 5.301805 TGCTCACAACTTGGATCGATCTATA 59.698 40.000 23.96 9.10 0.00 1.31
2092 6318 4.100035 TGCTCACAACTTGGATCGATCTAT 59.900 41.667 23.96 2.08 0.00 1.98
2093 6319 3.447229 TGCTCACAACTTGGATCGATCTA 59.553 43.478 23.96 16.51 0.00 1.98
2094 6320 2.234661 TGCTCACAACTTGGATCGATCT 59.765 45.455 23.96 2.03 0.00 2.75
2095 6321 2.621338 TGCTCACAACTTGGATCGATC 58.379 47.619 17.36 17.36 0.00 3.69
2096 6322 2.768253 TGCTCACAACTTGGATCGAT 57.232 45.000 0.00 0.00 0.00 3.59
2097 6323 2.234661 AGATGCTCACAACTTGGATCGA 59.765 45.455 0.00 0.00 0.00 3.59
2098 6324 2.350804 CAGATGCTCACAACTTGGATCG 59.649 50.000 0.00 0.00 0.00 3.69
2099 6325 3.126514 CACAGATGCTCACAACTTGGATC 59.873 47.826 0.00 0.00 0.00 3.36
2100 6326 3.079578 CACAGATGCTCACAACTTGGAT 58.920 45.455 0.00 0.00 0.00 3.41
2101 6327 2.497138 CACAGATGCTCACAACTTGGA 58.503 47.619 0.00 0.00 0.00 3.53
2102 6328 2.983402 CACAGATGCTCACAACTTGG 57.017 50.000 0.00 0.00 0.00 3.61
2114 6340 7.087007 ACTGACTATAATATGACGCACAGATG 58.913 38.462 0.00 0.00 30.39 2.90
2115 6341 7.220741 ACTGACTATAATATGACGCACAGAT 57.779 36.000 0.00 0.00 31.26 2.90
2116 6342 6.635030 ACTGACTATAATATGACGCACAGA 57.365 37.500 0.00 0.00 0.00 3.41
2117 6343 6.520104 CGTACTGACTATAATATGACGCACAG 59.480 42.308 0.00 0.00 0.00 3.66
2118 6344 6.368213 CGTACTGACTATAATATGACGCACA 58.632 40.000 0.00 0.00 0.00 4.57
2119 6345 6.834133 CGTACTGACTATAATATGACGCAC 57.166 41.667 0.00 0.00 0.00 5.34
2121 6347 5.911615 GCGTACTGACTATAATATGACGC 57.088 43.478 0.00 0.00 45.03 5.19
2122 6348 8.388853 ACTATGCGTACTGACTATAATATGACG 58.611 37.037 0.00 0.00 0.00 4.35
2131 6357 9.011095 ACATATTGTACTATGCGTACTGACTAT 57.989 33.333 0.00 0.00 46.89 2.12
2132 6358 8.387190 ACATATTGTACTATGCGTACTGACTA 57.613 34.615 0.00 0.00 46.89 2.59
2133 6359 7.273320 ACATATTGTACTATGCGTACTGACT 57.727 36.000 0.00 0.00 46.89 3.41
2134 6360 7.749570 CCTACATATTGTACTATGCGTACTGAC 59.250 40.741 0.00 0.00 46.89 3.51
2135 6361 7.662669 TCCTACATATTGTACTATGCGTACTGA 59.337 37.037 0.00 0.00 46.89 3.41
2136 6362 7.813645 TCCTACATATTGTACTATGCGTACTG 58.186 38.462 0.00 2.44 46.89 2.74
2137 6363 7.991084 TCCTACATATTGTACTATGCGTACT 57.009 36.000 0.00 0.00 46.89 2.73
2138 6364 7.540055 GGTTCCTACATATTGTACTATGCGTAC 59.460 40.741 0.00 0.00 46.94 3.67
2139 6365 7.449395 AGGTTCCTACATATTGTACTATGCGTA 59.551 37.037 0.00 1.35 33.26 4.42
2140 6366 6.267014 AGGTTCCTACATATTGTACTATGCGT 59.733 38.462 0.00 0.27 33.26 5.24
2141 6367 6.688578 AGGTTCCTACATATTGTACTATGCG 58.311 40.000 0.00 0.00 33.26 4.73
2142 6368 7.599245 GTGAGGTTCCTACATATTGTACTATGC 59.401 40.741 0.00 0.00 33.26 3.14
2143 6369 8.638873 TGTGAGGTTCCTACATATTGTACTATG 58.361 37.037 0.00 0.73 35.61 2.23
2144 6370 8.777578 TGTGAGGTTCCTACATATTGTACTAT 57.222 34.615 0.00 0.00 0.00 2.12
2145 6371 8.598202 TTGTGAGGTTCCTACATATTGTACTA 57.402 34.615 0.00 0.00 0.00 1.82
2146 6372 7.180408 ACTTGTGAGGTTCCTACATATTGTACT 59.820 37.037 0.00 0.00 0.00 2.73
2147 6373 7.277981 CACTTGTGAGGTTCCTACATATTGTAC 59.722 40.741 0.00 0.00 0.00 2.90
2148 6374 7.038587 ACACTTGTGAGGTTCCTACATATTGTA 60.039 37.037 7.83 0.00 0.00 2.41
2149 6375 6.173339 CACTTGTGAGGTTCCTACATATTGT 58.827 40.000 0.00 0.00 0.00 2.71
2150 6376 6.173339 ACACTTGTGAGGTTCCTACATATTG 58.827 40.000 7.83 0.00 0.00 1.90
2151 6377 6.374417 ACACTTGTGAGGTTCCTACATATT 57.626 37.500 7.83 0.00 0.00 1.28
2167 6393 6.881065 ACTTCATAATGCTCATACACACTTGT 59.119 34.615 0.00 0.00 40.02 3.16
2168 6394 7.312657 ACTTCATAATGCTCATACACACTTG 57.687 36.000 0.00 0.00 0.00 3.16
2169 6395 8.040727 TGTACTTCATAATGCTCATACACACTT 58.959 33.333 0.00 0.00 0.00 3.16
2170 6396 7.492669 GTGTACTTCATAATGCTCATACACACT 59.507 37.037 0.00 0.00 40.42 3.55
2171 6397 7.277760 TGTGTACTTCATAATGCTCATACACAC 59.722 37.037 9.23 0.00 43.62 3.82
2172 6398 7.327214 TGTGTACTTCATAATGCTCATACACA 58.673 34.615 9.23 9.23 45.27 3.72
2173 6399 7.770801 TGTGTACTTCATAATGCTCATACAC 57.229 36.000 0.00 0.00 40.86 2.90
2174 6400 8.664798 GTTTGTGTACTTCATAATGCTCATACA 58.335 33.333 0.00 0.00 0.00 2.29
2175 6401 8.664798 TGTTTGTGTACTTCATAATGCTCATAC 58.335 33.333 0.00 0.00 0.00 2.39
2176 6402 8.785329 TGTTTGTGTACTTCATAATGCTCATA 57.215 30.769 0.00 0.00 0.00 2.15
2177 6403 7.686438 TGTTTGTGTACTTCATAATGCTCAT 57.314 32.000 0.00 0.00 0.00 2.90
2178 6404 7.503521 TTGTTTGTGTACTTCATAATGCTCA 57.496 32.000 0.00 0.00 0.00 4.26
2179 6405 8.690840 GTTTTGTTTGTGTACTTCATAATGCTC 58.309 33.333 0.00 0.00 0.00 4.26
2180 6406 7.378461 CGTTTTGTTTGTGTACTTCATAATGCT 59.622 33.333 0.00 0.00 0.00 3.79
2181 6407 7.166804 ACGTTTTGTTTGTGTACTTCATAATGC 59.833 33.333 0.00 0.00 0.00 3.56
2182 6408 8.555166 ACGTTTTGTTTGTGTACTTCATAATG 57.445 30.769 0.00 0.00 0.00 1.90
2183 6409 7.584847 CGACGTTTTGTTTGTGTACTTCATAAT 59.415 33.333 0.00 0.00 0.00 1.28
2184 6410 6.900828 CGACGTTTTGTTTGTGTACTTCATAA 59.099 34.615 0.00 0.00 0.00 1.90
2185 6411 6.255237 TCGACGTTTTGTTTGTGTACTTCATA 59.745 34.615 0.00 0.00 0.00 2.15
2186 6412 5.063691 TCGACGTTTTGTTTGTGTACTTCAT 59.936 36.000 0.00 0.00 0.00 2.57
2187 6413 4.388165 TCGACGTTTTGTTTGTGTACTTCA 59.612 37.500 0.00 0.00 0.00 3.02
2188 6414 4.720568 GTCGACGTTTTGTTTGTGTACTTC 59.279 41.667 0.00 0.00 0.00 3.01
2189 6415 4.435917 GGTCGACGTTTTGTTTGTGTACTT 60.436 41.667 9.92 0.00 0.00 2.24
2190 6416 3.062504 GGTCGACGTTTTGTTTGTGTACT 59.937 43.478 9.92 0.00 0.00 2.73
2191 6417 3.344852 GGTCGACGTTTTGTTTGTGTAC 58.655 45.455 9.92 0.00 0.00 2.90
2192 6418 2.029003 CGGTCGACGTTTTGTTTGTGTA 59.971 45.455 9.92 0.00 37.93 2.90
2193 6419 1.201943 CGGTCGACGTTTTGTTTGTGT 60.202 47.619 9.92 0.00 37.93 3.72
2194 6420 1.060842 TCGGTCGACGTTTTGTTTGTG 59.939 47.619 9.92 0.00 44.69 3.33
2195 6421 1.357907 TCGGTCGACGTTTTGTTTGT 58.642 45.000 9.92 0.00 44.69 2.83
2196 6422 2.438933 TTCGGTCGACGTTTTGTTTG 57.561 45.000 9.92 0.00 44.69 2.93
2197 6423 3.356145 CATTTCGGTCGACGTTTTGTTT 58.644 40.909 9.92 0.00 44.69 2.83
2198 6424 2.286536 CCATTTCGGTCGACGTTTTGTT 60.287 45.455 9.92 0.00 44.69 2.83
2199 6425 1.262151 CCATTTCGGTCGACGTTTTGT 59.738 47.619 9.92 0.00 44.69 2.83
2200 6426 1.527736 TCCATTTCGGTCGACGTTTTG 59.472 47.619 9.92 3.53 44.69 2.44
2201 6427 1.528161 GTCCATTTCGGTCGACGTTTT 59.472 47.619 9.92 0.00 44.69 2.43
2202 6428 1.142474 GTCCATTTCGGTCGACGTTT 58.858 50.000 9.92 0.00 44.69 3.60
2203 6429 0.032403 TGTCCATTTCGGTCGACGTT 59.968 50.000 9.92 0.00 44.69 3.99
2204 6430 0.032403 TTGTCCATTTCGGTCGACGT 59.968 50.000 9.92 0.00 44.69 4.34
2205 6431 1.126113 CTTTGTCCATTTCGGTCGACG 59.874 52.381 9.92 5.26 46.11 5.12
2206 6432 2.409975 TCTTTGTCCATTTCGGTCGAC 58.590 47.619 7.13 7.13 35.57 4.20
2207 6433 2.823924 TCTTTGTCCATTTCGGTCGA 57.176 45.000 0.00 0.00 35.57 4.20
2208 6434 3.889196 TTTCTTTGTCCATTTCGGTCG 57.111 42.857 0.00 0.00 35.57 4.79
2209 6435 4.738252 GTGTTTTCTTTGTCCATTTCGGTC 59.262 41.667 0.00 0.00 35.57 4.79
2210 6436 4.158764 TGTGTTTTCTTTGTCCATTTCGGT 59.841 37.500 0.00 0.00 35.57 4.69
2211 6437 4.677584 TGTGTTTTCTTTGTCCATTTCGG 58.322 39.130 0.00 0.00 0.00 4.30
2212 6438 4.207019 GCTGTGTTTTCTTTGTCCATTTCG 59.793 41.667 0.00 0.00 0.00 3.46
2213 6439 4.507756 GGCTGTGTTTTCTTTGTCCATTTC 59.492 41.667 0.00 0.00 0.00 2.17
2214 6440 4.441792 GGCTGTGTTTTCTTTGTCCATTT 58.558 39.130 0.00 0.00 0.00 2.32
2215 6441 3.181466 GGGCTGTGTTTTCTTTGTCCATT 60.181 43.478 0.00 0.00 0.00 3.16
2216 6442 2.365293 GGGCTGTGTTTTCTTTGTCCAT 59.635 45.455 0.00 0.00 0.00 3.41
2217 6443 1.754226 GGGCTGTGTTTTCTTTGTCCA 59.246 47.619 0.00 0.00 0.00 4.02
2218 6444 1.754226 TGGGCTGTGTTTTCTTTGTCC 59.246 47.619 0.00 0.00 0.00 4.02
2219 6445 3.733443 ATGGGCTGTGTTTTCTTTGTC 57.267 42.857 0.00 0.00 0.00 3.18
2220 6446 4.190772 CAAATGGGCTGTGTTTTCTTTGT 58.809 39.130 0.00 0.00 0.00 2.83
2221 6447 3.002553 GCAAATGGGCTGTGTTTTCTTTG 59.997 43.478 0.00 0.00 0.00 2.77
2222 6448 3.205338 GCAAATGGGCTGTGTTTTCTTT 58.795 40.909 0.00 0.00 0.00 2.52
2223 6449 2.802774 CGCAAATGGGCTGTGTTTTCTT 60.803 45.455 0.00 0.00 0.00 2.52
2224 6450 1.269726 CGCAAATGGGCTGTGTTTTCT 60.270 47.619 0.00 0.00 0.00 2.52
2225 6451 1.139163 CGCAAATGGGCTGTGTTTTC 58.861 50.000 0.00 0.00 0.00 2.29
2226 6452 0.749649 TCGCAAATGGGCTGTGTTTT 59.250 45.000 0.00 0.00 0.00 2.43
2227 6453 0.749649 TTCGCAAATGGGCTGTGTTT 59.250 45.000 0.00 0.00 0.00 2.83
2228 6454 0.968405 ATTCGCAAATGGGCTGTGTT 59.032 45.000 0.00 0.00 0.00 3.32
2229 6455 0.244450 CATTCGCAAATGGGCTGTGT 59.756 50.000 0.00 0.00 38.91 3.72
2230 6456 3.038946 CATTCGCAAATGGGCTGTG 57.961 52.632 0.00 0.00 38.91 3.66
2237 6463 3.806521 TCAAACCAAACCATTCGCAAATG 59.193 39.130 0.00 0.00 41.69 2.32
2238 6464 3.807071 GTCAAACCAAACCATTCGCAAAT 59.193 39.130 0.00 0.00 0.00 2.32
2239 6465 3.190874 GTCAAACCAAACCATTCGCAAA 58.809 40.909 0.00 0.00 0.00 3.68
2240 6466 2.166459 TGTCAAACCAAACCATTCGCAA 59.834 40.909 0.00 0.00 0.00 4.85
2241 6467 1.751351 TGTCAAACCAAACCATTCGCA 59.249 42.857 0.00 0.00 0.00 5.10
2242 6468 2.124122 GTGTCAAACCAAACCATTCGC 58.876 47.619 0.00 0.00 0.00 4.70
2243 6469 3.708563 AGTGTCAAACCAAACCATTCG 57.291 42.857 0.00 0.00 0.00 3.34
2244 6470 4.555906 CGGTAGTGTCAAACCAAACCATTC 60.556 45.833 6.46 0.00 35.35 2.67
2245 6471 3.316868 CGGTAGTGTCAAACCAAACCATT 59.683 43.478 6.46 0.00 35.35 3.16
2246 6472 2.882137 CGGTAGTGTCAAACCAAACCAT 59.118 45.455 6.46 0.00 35.35 3.55
2247 6473 2.093075 TCGGTAGTGTCAAACCAAACCA 60.093 45.455 6.46 0.00 35.35 3.67
2248 6474 2.563702 TCGGTAGTGTCAAACCAAACC 58.436 47.619 6.46 0.00 35.35 3.27
2249 6475 4.390909 CCTATCGGTAGTGTCAAACCAAAC 59.609 45.833 1.27 0.00 35.35 2.93
2250 6476 4.563993 CCCTATCGGTAGTGTCAAACCAAA 60.564 45.833 1.27 0.00 35.35 3.28
2251 6477 3.055675 CCCTATCGGTAGTGTCAAACCAA 60.056 47.826 1.27 0.00 35.35 3.67
2252 6478 2.498481 CCCTATCGGTAGTGTCAAACCA 59.502 50.000 1.27 0.00 35.35 3.67
2253 6479 2.762327 TCCCTATCGGTAGTGTCAAACC 59.238 50.000 1.27 0.00 0.00 3.27
2254 6480 4.369182 CATCCCTATCGGTAGTGTCAAAC 58.631 47.826 1.27 0.00 0.00 2.93
2255 6481 3.181469 GCATCCCTATCGGTAGTGTCAAA 60.181 47.826 1.27 0.00 0.00 2.69
2256 6482 2.364324 GCATCCCTATCGGTAGTGTCAA 59.636 50.000 1.27 0.00 0.00 3.18
2257 6483 1.961394 GCATCCCTATCGGTAGTGTCA 59.039 52.381 1.27 0.00 0.00 3.58
2258 6484 1.961394 TGCATCCCTATCGGTAGTGTC 59.039 52.381 1.27 0.00 0.00 3.67
2259 6485 2.082140 TGCATCCCTATCGGTAGTGT 57.918 50.000 1.27 0.00 0.00 3.55
2260 6486 3.469008 TTTGCATCCCTATCGGTAGTG 57.531 47.619 1.27 0.00 0.00 2.74
2261 6487 4.706842 AATTTGCATCCCTATCGGTAGT 57.293 40.909 1.27 0.00 0.00 2.73
2262 6488 4.216257 CCAAATTTGCATCCCTATCGGTAG 59.784 45.833 12.92 0.00 0.00 3.18
2263 6489 4.141287 CCAAATTTGCATCCCTATCGGTA 58.859 43.478 12.92 0.00 0.00 4.02
2264 6490 2.958355 CCAAATTTGCATCCCTATCGGT 59.042 45.455 12.92 0.00 0.00 4.69
2265 6491 3.221771 TCCAAATTTGCATCCCTATCGG 58.778 45.455 12.92 0.00 0.00 4.18
2266 6492 4.499696 GGTTCCAAATTTGCATCCCTATCG 60.500 45.833 12.92 0.00 0.00 2.92
2267 6493 4.651045 AGGTTCCAAATTTGCATCCCTATC 59.349 41.667 12.92 0.00 0.00 2.08
2268 6494 4.623863 AGGTTCCAAATTTGCATCCCTAT 58.376 39.130 12.92 0.00 0.00 2.57
2269 6495 4.023291 GAGGTTCCAAATTTGCATCCCTA 58.977 43.478 12.92 0.00 0.00 3.53
2270 6496 2.833943 GAGGTTCCAAATTTGCATCCCT 59.166 45.455 12.92 13.25 0.00 4.20
2271 6497 2.566724 TGAGGTTCCAAATTTGCATCCC 59.433 45.455 12.92 9.03 0.00 3.85
2272 6498 3.959535 TGAGGTTCCAAATTTGCATCC 57.040 42.857 12.92 6.88 0.00 3.51
2273 6499 3.996363 GGTTGAGGTTCCAAATTTGCATC 59.004 43.478 12.92 7.25 0.00 3.91
2274 6500 3.244526 GGGTTGAGGTTCCAAATTTGCAT 60.245 43.478 12.92 0.00 0.00 3.96
2275 6501 2.103941 GGGTTGAGGTTCCAAATTTGCA 59.896 45.455 12.92 0.00 0.00 4.08
2276 6502 2.368548 AGGGTTGAGGTTCCAAATTTGC 59.631 45.455 12.92 0.00 0.00 3.68
2277 6503 3.006859 GGAGGGTTGAGGTTCCAAATTTG 59.993 47.826 11.40 11.40 0.00 2.32
2278 6504 3.239449 GGAGGGTTGAGGTTCCAAATTT 58.761 45.455 0.00 0.00 0.00 1.82
2279 6505 2.178984 TGGAGGGTTGAGGTTCCAAATT 59.821 45.455 0.00 0.00 36.81 1.82
2280 6506 1.786441 TGGAGGGTTGAGGTTCCAAAT 59.214 47.619 0.00 0.00 36.81 2.32
2281 6507 1.227249 TGGAGGGTTGAGGTTCCAAA 58.773 50.000 0.00 0.00 36.81 3.28
2282 6508 1.133606 GTTGGAGGGTTGAGGTTCCAA 60.134 52.381 0.91 0.91 44.95 3.53
2283 6509 0.476771 GTTGGAGGGTTGAGGTTCCA 59.523 55.000 0.00 0.00 37.92 3.53
2284 6510 0.251209 GGTTGGAGGGTTGAGGTTCC 60.251 60.000 0.00 0.00 0.00 3.62
2285 6511 0.251209 GGGTTGGAGGGTTGAGGTTC 60.251 60.000 0.00 0.00 0.00 3.62
2286 6512 0.701310 AGGGTTGGAGGGTTGAGGTT 60.701 55.000 0.00 0.00 0.00 3.50
2287 6513 1.072930 AGGGTTGGAGGGTTGAGGT 60.073 57.895 0.00 0.00 0.00 3.85
2288 6514 0.842467 AGAGGGTTGGAGGGTTGAGG 60.842 60.000 0.00 0.00 0.00 3.86
2289 6515 1.068121 AAGAGGGTTGGAGGGTTGAG 58.932 55.000 0.00 0.00 0.00 3.02
2290 6516 1.529744 AAAGAGGGTTGGAGGGTTGA 58.470 50.000 0.00 0.00 0.00 3.18
2291 6517 2.375509 ACTAAAGAGGGTTGGAGGGTTG 59.624 50.000 0.00 0.00 0.00 3.77
2292 6518 2.714808 ACTAAAGAGGGTTGGAGGGTT 58.285 47.619 0.00 0.00 0.00 4.11
2293 6519 2.375509 CAACTAAAGAGGGTTGGAGGGT 59.624 50.000 0.00 0.00 39.08 4.34
2294 6520 2.642807 TCAACTAAAGAGGGTTGGAGGG 59.357 50.000 0.00 0.00 41.91 4.30
2295 6521 4.327680 CTTCAACTAAAGAGGGTTGGAGG 58.672 47.826 6.30 0.00 42.30 4.30
2297 6523 6.503560 TTACTTCAACTAAAGAGGGTTGGA 57.496 37.500 0.00 0.00 41.91 3.53
2298 6524 6.771267 ACTTTACTTCAACTAAAGAGGGTTGG 59.229 38.462 4.16 0.00 41.91 3.77
2299 6525 7.803279 ACTTTACTTCAACTAAAGAGGGTTG 57.197 36.000 4.16 0.00 42.66 3.77
2300 6526 9.910267 TTTACTTTACTTCAACTAAAGAGGGTT 57.090 29.630 4.16 0.00 35.56 4.11
2380 6608 7.138692 ACTTGATGCTCTATTTTGAGTCAAC 57.861 36.000 4.68 0.00 36.51 3.18
2394 6622 6.591834 ACTGTGTTTGTATCTACTTGATGCTC 59.408 38.462 0.00 0.00 38.39 4.26
2464 6694 2.022934 GTTTTTCCGTGTGGGTTGGTA 58.977 47.619 0.00 0.00 37.00 3.25
2477 6713 0.034756 ATTTGCCAGCCGGTTTTTCC 59.965 50.000 1.90 0.00 33.28 3.13
2486 6729 1.545582 TGACTTTGCTATTTGCCAGCC 59.454 47.619 0.00 0.00 42.00 4.85
2567 6811 8.188139 GGATATGGTTGTTGTATTTTGTCGATT 58.812 33.333 0.00 0.00 0.00 3.34
2595 6842 1.614051 GGTGTCATGAGATGGTTGGCA 60.614 52.381 0.00 0.00 0.00 4.92
2596 6847 1.098050 GGTGTCATGAGATGGTTGGC 58.902 55.000 0.00 0.00 0.00 4.52
2636 6887 0.250252 TCGTGAAGGCATTGCTGTCA 60.250 50.000 8.82 9.36 0.00 3.58
2637 6888 0.874390 TTCGTGAAGGCATTGCTGTC 59.126 50.000 8.82 6.86 0.00 3.51
2707 6959 5.228945 TCTTCAGGGTGAAAACCTAGAAG 57.771 43.478 16.68 16.68 40.56 2.85
2859 7117 6.005066 ACATATGATTGACTCCAATGGTGA 57.995 37.500 10.38 0.00 42.66 4.02
2942 7200 2.165167 CAGCAGAAATGACCACCACAT 58.835 47.619 0.00 0.00 0.00 3.21
2943 7201 1.608055 CAGCAGAAATGACCACCACA 58.392 50.000 0.00 0.00 0.00 4.17
2944 7202 0.883833 CCAGCAGAAATGACCACCAC 59.116 55.000 0.00 0.00 0.00 4.16
2945 7203 0.770499 TCCAGCAGAAATGACCACCA 59.230 50.000 0.00 0.00 0.00 4.17
2946 7204 1.909700 TTCCAGCAGAAATGACCACC 58.090 50.000 0.00 0.00 0.00 4.61
2947 7205 2.622942 TGTTTCCAGCAGAAATGACCAC 59.377 45.455 5.37 0.00 45.99 4.16
2948 7206 2.886523 CTGTTTCCAGCAGAAATGACCA 59.113 45.455 5.37 0.00 45.99 4.02
2949 7207 3.565905 CTGTTTCCAGCAGAAATGACC 57.434 47.619 5.37 0.00 45.99 4.02
2960 7218 1.067565 TCGTGCTCTAGCTGTTTCCAG 60.068 52.381 0.00 0.00 42.66 3.86
2961 7219 0.966179 TCGTGCTCTAGCTGTTTCCA 59.034 50.000 0.00 0.00 42.66 3.53
2962 7220 1.351153 GTCGTGCTCTAGCTGTTTCC 58.649 55.000 0.00 0.00 42.66 3.13
2963 7221 1.351153 GGTCGTGCTCTAGCTGTTTC 58.649 55.000 0.00 0.00 42.66 2.78
2964 7222 0.388649 CGGTCGTGCTCTAGCTGTTT 60.389 55.000 0.00 0.00 42.66 2.83
2965 7223 1.213013 CGGTCGTGCTCTAGCTGTT 59.787 57.895 0.00 0.00 42.66 3.16
2966 7224 1.241990 TTCGGTCGTGCTCTAGCTGT 61.242 55.000 0.00 0.00 42.66 4.40
2967 7225 0.109272 TTTCGGTCGTGCTCTAGCTG 60.109 55.000 0.00 0.00 42.66 4.24
2968 7226 0.109226 GTTTCGGTCGTGCTCTAGCT 60.109 55.000 3.26 0.00 42.66 3.32
2969 7227 1.077089 GGTTTCGGTCGTGCTCTAGC 61.077 60.000 0.00 0.00 42.50 3.42
2970 7228 0.242825 TGGTTTCGGTCGTGCTCTAG 59.757 55.000 0.00 0.00 0.00 2.43
2971 7229 0.242825 CTGGTTTCGGTCGTGCTCTA 59.757 55.000 0.00 0.00 0.00 2.43
2972 7230 1.006102 CTGGTTTCGGTCGTGCTCT 60.006 57.895 0.00 0.00 0.00 4.09
2973 7231 0.038892 TACTGGTTTCGGTCGTGCTC 60.039 55.000 0.00 0.00 33.86 4.26
2974 7232 0.319297 GTACTGGTTTCGGTCGTGCT 60.319 55.000 0.00 0.00 33.86 4.40
2975 7233 0.319297 AGTACTGGTTTCGGTCGTGC 60.319 55.000 0.00 0.00 33.86 5.34
2976 7234 1.415374 CAGTACTGGTTTCGGTCGTG 58.585 55.000 15.49 0.00 33.86 4.35
2977 7235 0.319297 GCAGTACTGGTTTCGGTCGT 60.319 55.000 23.95 0.00 33.86 4.34
2978 7236 0.038526 AGCAGTACTGGTTTCGGTCG 60.039 55.000 21.62 0.00 38.24 4.79
2979 7237 2.877335 CTAGCAGTACTGGTTTCGGTC 58.123 52.381 30.71 8.68 41.96 4.79
2980 7238 1.067071 GCTAGCAGTACTGGTTTCGGT 60.067 52.381 30.71 9.09 41.96 4.69
2981 7239 1.067142 TGCTAGCAGTACTGGTTTCGG 60.067 52.381 30.71 18.81 41.96 4.30
2982 7240 1.993370 GTGCTAGCAGTACTGGTTTCG 59.007 52.381 30.71 19.88 41.96 3.46
2983 7241 3.320673 AGTGCTAGCAGTACTGGTTTC 57.679 47.619 30.71 21.78 39.72 2.78
2984 7242 3.325135 AGAAGTGCTAGCAGTACTGGTTT 59.675 43.478 30.71 19.00 40.32 3.27
2985 7243 2.900546 AGAAGTGCTAGCAGTACTGGTT 59.099 45.455 30.71 13.32 40.32 3.67
2986 7244 2.530701 AGAAGTGCTAGCAGTACTGGT 58.469 47.619 28.84 28.84 40.32 4.00
2987 7245 3.056536 TCAAGAAGTGCTAGCAGTACTGG 60.057 47.826 25.01 16.88 40.32 4.00
2988 7246 4.179926 TCAAGAAGTGCTAGCAGTACTG 57.820 45.455 25.01 18.93 40.32 2.74
2989 7247 5.413309 AATCAAGAAGTGCTAGCAGTACT 57.587 39.130 25.01 16.79 43.08 2.73
2990 7248 6.073003 ACAAAATCAAGAAGTGCTAGCAGTAC 60.073 38.462 25.01 14.89 0.00 2.73
2991 7249 5.997746 ACAAAATCAAGAAGTGCTAGCAGTA 59.002 36.000 25.01 9.89 0.00 2.74
2992 7250 4.823989 ACAAAATCAAGAAGTGCTAGCAGT 59.176 37.500 20.03 19.79 0.00 4.40
2993 7251 5.368256 ACAAAATCAAGAAGTGCTAGCAG 57.632 39.130 20.03 5.24 0.00 4.24
2994 7252 5.772825 AACAAAATCAAGAAGTGCTAGCA 57.227 34.783 14.93 14.93 0.00 3.49
2995 7253 6.476706 ACAAAACAAAATCAAGAAGTGCTAGC 59.523 34.615 8.10 8.10 0.00 3.42
2996 7254 7.992180 ACAAAACAAAATCAAGAAGTGCTAG 57.008 32.000 0.00 0.00 0.00 3.42
2997 7255 8.770438 AAACAAAACAAAATCAAGAAGTGCTA 57.230 26.923 0.00 0.00 0.00 3.49
2998 7256 7.603784 AGAAACAAAACAAAATCAAGAAGTGCT 59.396 29.630 0.00 0.00 0.00 4.40
2999 7257 7.689400 CAGAAACAAAACAAAATCAAGAAGTGC 59.311 33.333 0.00 0.00 0.00 4.40
3000 7258 8.924691 TCAGAAACAAAACAAAATCAAGAAGTG 58.075 29.630 0.00 0.00 0.00 3.16
3001 7259 9.657419 ATCAGAAACAAAACAAAATCAAGAAGT 57.343 25.926 0.00 0.00 0.00 3.01
3007 7265 9.474920 GGTCATATCAGAAACAAAACAAAATCA 57.525 29.630 0.00 0.00 0.00 2.57
3008 7266 9.474920 TGGTCATATCAGAAACAAAACAAAATC 57.525 29.630 0.00 0.00 0.00 2.17
3009 7267 9.829507 TTGGTCATATCAGAAACAAAACAAAAT 57.170 25.926 0.00 0.00 0.00 1.82
3010 7268 9.092876 GTTGGTCATATCAGAAACAAAACAAAA 57.907 29.630 0.00 0.00 0.00 2.44
3011 7269 8.253810 TGTTGGTCATATCAGAAACAAAACAAA 58.746 29.630 0.00 0.00 0.00 2.83
3012 7270 7.776107 TGTTGGTCATATCAGAAACAAAACAA 58.224 30.769 0.00 0.00 0.00 2.83
3013 7271 7.068103 ACTGTTGGTCATATCAGAAACAAAACA 59.932 33.333 0.00 0.00 0.00 2.83
3014 7272 7.379529 CACTGTTGGTCATATCAGAAACAAAAC 59.620 37.037 0.00 0.00 0.00 2.43
3015 7273 7.284261 TCACTGTTGGTCATATCAGAAACAAAA 59.716 33.333 0.00 0.00 0.00 2.44
3016 7274 6.770303 TCACTGTTGGTCATATCAGAAACAAA 59.230 34.615 0.00 0.00 0.00 2.83
3017 7275 6.295249 TCACTGTTGGTCATATCAGAAACAA 58.705 36.000 0.00 0.00 0.00 2.83
3018 7276 5.863965 TCACTGTTGGTCATATCAGAAACA 58.136 37.500 0.00 0.00 0.00 2.83
3019 7277 6.428159 ACTTCACTGTTGGTCATATCAGAAAC 59.572 38.462 0.00 0.00 0.00 2.78
3020 7278 6.533730 ACTTCACTGTTGGTCATATCAGAAA 58.466 36.000 0.00 0.00 0.00 2.52
3021 7279 6.114187 ACTTCACTGTTGGTCATATCAGAA 57.886 37.500 0.00 0.00 0.00 3.02
3022 7280 5.745312 ACTTCACTGTTGGTCATATCAGA 57.255 39.130 0.00 0.00 0.00 3.27
3023 7281 6.427853 TGAAACTTCACTGTTGGTCATATCAG 59.572 38.462 0.00 0.00 31.01 2.90
3024 7282 6.295249 TGAAACTTCACTGTTGGTCATATCA 58.705 36.000 0.00 0.00 31.01 2.15
3025 7283 6.801539 TGAAACTTCACTGTTGGTCATATC 57.198 37.500 0.00 0.00 31.01 1.63
3039 7297 3.551846 GTTCCTTCAGGGTGAAACTTCA 58.448 45.455 0.00 0.00 35.73 3.02
3040 7298 2.885266 GGTTCCTTCAGGGTGAAACTTC 59.115 50.000 0.00 0.00 35.73 3.01
3041 7299 2.243736 TGGTTCCTTCAGGGTGAAACTT 59.756 45.455 0.00 0.00 35.73 2.66
3042 7300 1.850345 TGGTTCCTTCAGGGTGAAACT 59.150 47.619 0.00 0.00 35.73 2.66
3043 7301 1.954382 GTGGTTCCTTCAGGGTGAAAC 59.046 52.381 0.00 0.00 35.73 2.78
3044 7302 1.566703 TGTGGTTCCTTCAGGGTGAAA 59.433 47.619 0.00 0.00 35.73 2.69
3045 7303 1.133915 GTGTGGTTCCTTCAGGGTGAA 60.134 52.381 0.00 0.00 34.79 3.18
3046 7304 0.472471 GTGTGGTTCCTTCAGGGTGA 59.528 55.000 0.00 0.00 36.25 4.02
3047 7305 0.474184 AGTGTGGTTCCTTCAGGGTG 59.526 55.000 0.00 0.00 36.25 4.61
3048 7306 2.112279 TAGTGTGGTTCCTTCAGGGT 57.888 50.000 0.00 0.00 36.25 4.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.