Multiple sequence alignment - TraesCS3B01G036300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G036300 chr3B 100.000 3508 0 0 1 3508 17807924 17804417 0.000000e+00 6479.0
1 TraesCS3B01G036300 chr3B 85.774 1680 201 22 877 2523 17333457 17331783 0.000000e+00 1744.0
2 TraesCS3B01G036300 chr3B 82.560 1617 228 37 1012 2607 17355100 17353517 0.000000e+00 1375.0
3 TraesCS3B01G036300 chr3B 79.921 1778 276 49 877 2607 17285177 17283434 0.000000e+00 1230.0
4 TraesCS3B01G036300 chr3B 83.305 1168 157 21 1470 2621 17315834 17314689 0.000000e+00 1042.0
5 TraesCS3B01G036300 chr3B 78.095 105 18 4 3062 3163 769461097 769461199 1.050000e-05 62.1
6 TraesCS3B01G036300 chr3D 86.205 1805 190 33 877 2632 12126588 12124794 0.000000e+00 1899.0
7 TraesCS3B01G036300 chr3D 78.361 1220 187 44 1017 2213 12093806 12092641 0.000000e+00 719.0
8 TraesCS3B01G036300 chr3D 75.265 1512 282 50 1011 2491 12060233 12058783 1.370000e-178 636.0
9 TraesCS3B01G036300 chr3D 77.273 572 74 28 1 534 573453407 573452854 5.730000e-73 285.0
10 TraesCS3B01G036300 chr3A 85.556 1710 207 30 938 2618 25037979 25039677 0.000000e+00 1753.0
11 TraesCS3B01G036300 chr3A 83.763 1164 141 28 1470 2608 25052023 25053163 0.000000e+00 1059.0
12 TraesCS3B01G036300 chr3A 78.390 1615 281 38 993 2580 25043522 25045095 0.000000e+00 987.0
13 TraesCS3B01G036300 chr3A 75.591 1524 283 53 999 2491 25059976 25061441 0.000000e+00 671.0
14 TraesCS3B01G036300 chr3A 83.019 318 43 3 2 310 50079539 50079854 9.590000e-71 278.0
15 TraesCS3B01G036300 chr3A 76.302 557 93 26 13 534 124215565 124216117 9.660000e-66 261.0
16 TraesCS3B01G036300 chr1B 83.568 639 80 10 2791 3414 39990128 39989500 3.040000e-160 575.0
17 TraesCS3B01G036300 chr1B 85.915 284 31 1 1 275 447561509 447561226 9.520000e-76 294.0
18 TraesCS3B01G036300 chr1B 96.875 32 1 0 3135 3166 632932069 632932038 2.000000e-03 54.7
19 TraesCS3B01G036300 chr7B 83.155 653 81 15 2779 3414 721312491 721311851 1.410000e-158 569.0
20 TraesCS3B01G036300 chr7B 78.462 130 26 2 3288 3416 240492883 240492755 2.240000e-12 84.2
21 TraesCS3B01G036300 chr1A 80.982 652 99 12 2779 3414 1940068 1939426 8.750000e-136 494.0
22 TraesCS3B01G036300 chr4B 81.670 551 66 13 10 534 39313293 39312752 3.240000e-115 425.0
23 TraesCS3B01G036300 chr4B 80.894 492 55 18 1 468 645329184 645329660 5.570000e-93 351.0
24 TraesCS3B01G036300 chr2D 81.283 561 68 20 1 531 401545121 401545674 1.510000e-113 420.0
25 TraesCS3B01G036300 chr2D 85.981 321 32 4 1 311 450938651 450938968 7.260000e-87 331.0
26 TraesCS3B01G036300 chr5A 82.752 487 58 9 1 468 682891990 682891511 9.060000e-111 411.0
27 TraesCS3B01G036300 chr1D 79.928 558 72 20 1 532 4177638 4177095 1.190000e-99 374.0
28 TraesCS3B01G036300 chr1D 79.262 569 62 27 1 534 332686481 332685934 2.590000e-91 346.0
29 TraesCS3B01G036300 chr6D 88.015 267 32 0 43 309 328629438 328629172 2.030000e-82 316.0
30 TraesCS3B01G036300 chr6D 83.851 161 21 3 374 530 328618099 328617940 7.850000e-32 148.0
31 TraesCS3B01G036300 chr2B 77.778 567 66 32 1 531 475633028 475633570 9.520000e-76 294.0
32 TraesCS3B01G036300 chr5D 77.058 571 74 34 1 534 371289628 371290178 3.450000e-70 276.0
33 TraesCS3B01G036300 chr5B 79.751 321 42 13 1 310 440568532 440568840 9.870000e-51 211.0
34 TraesCS3B01G036300 chr6B 76.449 276 51 9 3137 3402 569960696 569960967 1.700000e-28 137.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G036300 chr3B 17804417 17807924 3507 True 6479 6479 100.000 1 3508 1 chr3B.!!$R5 3507
1 TraesCS3B01G036300 chr3B 17331783 17333457 1674 True 1744 1744 85.774 877 2523 1 chr3B.!!$R3 1646
2 TraesCS3B01G036300 chr3B 17353517 17355100 1583 True 1375 1375 82.560 1012 2607 1 chr3B.!!$R4 1595
3 TraesCS3B01G036300 chr3B 17283434 17285177 1743 True 1230 1230 79.921 877 2607 1 chr3B.!!$R1 1730
4 TraesCS3B01G036300 chr3B 17314689 17315834 1145 True 1042 1042 83.305 1470 2621 1 chr3B.!!$R2 1151
5 TraesCS3B01G036300 chr3D 12124794 12126588 1794 True 1899 1899 86.205 877 2632 1 chr3D.!!$R3 1755
6 TraesCS3B01G036300 chr3D 12092641 12093806 1165 True 719 719 78.361 1017 2213 1 chr3D.!!$R2 1196
7 TraesCS3B01G036300 chr3D 12058783 12060233 1450 True 636 636 75.265 1011 2491 1 chr3D.!!$R1 1480
8 TraesCS3B01G036300 chr3D 573452854 573453407 553 True 285 285 77.273 1 534 1 chr3D.!!$R4 533
9 TraesCS3B01G036300 chr3A 25037979 25045095 7116 False 1370 1753 81.973 938 2618 2 chr3A.!!$F5 1680
10 TraesCS3B01G036300 chr3A 25052023 25053163 1140 False 1059 1059 83.763 1470 2608 1 chr3A.!!$F1 1138
11 TraesCS3B01G036300 chr3A 25059976 25061441 1465 False 671 671 75.591 999 2491 1 chr3A.!!$F2 1492
12 TraesCS3B01G036300 chr3A 124215565 124216117 552 False 261 261 76.302 13 534 1 chr3A.!!$F4 521
13 TraesCS3B01G036300 chr1B 39989500 39990128 628 True 575 575 83.568 2791 3414 1 chr1B.!!$R1 623
14 TraesCS3B01G036300 chr7B 721311851 721312491 640 True 569 569 83.155 2779 3414 1 chr7B.!!$R2 635
15 TraesCS3B01G036300 chr1A 1939426 1940068 642 True 494 494 80.982 2779 3414 1 chr1A.!!$R1 635
16 TraesCS3B01G036300 chr4B 39312752 39313293 541 True 425 425 81.670 10 534 1 chr4B.!!$R1 524
17 TraesCS3B01G036300 chr2D 401545121 401545674 553 False 420 420 81.283 1 531 1 chr2D.!!$F1 530
18 TraesCS3B01G036300 chr1D 4177095 4177638 543 True 374 374 79.928 1 532 1 chr1D.!!$R1 531
19 TraesCS3B01G036300 chr1D 332685934 332686481 547 True 346 346 79.262 1 534 1 chr1D.!!$R2 533
20 TraesCS3B01G036300 chr2B 475633028 475633570 542 False 294 294 77.778 1 531 1 chr2B.!!$F1 530
21 TraesCS3B01G036300 chr5D 371289628 371290178 550 False 276 276 77.058 1 534 1 chr5D.!!$F1 533

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
600 691 0.035439 AGTGATAAACCGCACCCCTG 60.035 55.0 0.00 0.0 35.67 4.45 F
602 693 0.035820 TGATAAACCGCACCCCTGTC 60.036 55.0 0.00 0.0 0.00 3.51 F
603 694 0.035820 GATAAACCGCACCCCTGTCA 60.036 55.0 0.00 0.0 0.00 3.58 F
605 696 0.183014 TAAACCGCACCCCTGTCAAA 59.817 50.0 0.00 0.0 0.00 2.69 F
611 702 0.251165 GCACCCCTGTCAAAAGGCTA 60.251 55.0 0.00 0.0 35.85 3.93 F
875 966 0.446222 CAGGTGATGTTTTACGGCGG 59.554 55.0 13.24 0.0 0.00 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1617 1809 0.033405 CCTCCCAACGTCCTCTCCTA 60.033 60.0 0.00 0.0 0.00 2.94 R
1626 1818 0.763223 ACAACCTCTCCTCCCAACGT 60.763 55.0 0.00 0.0 0.00 3.99 R
1697 1889 2.115533 GACGGAGCGGAGTCGGATAC 62.116 65.0 1.18 0.0 36.79 2.24 R
1699 1891 2.321263 TAGACGGAGCGGAGTCGGAT 62.321 60.0 1.18 0.0 41.86 4.18 R
1700 1892 2.321263 ATAGACGGAGCGGAGTCGGA 62.321 60.0 1.18 0.0 41.86 4.55 R
2761 3119 0.035317 TGTCAGTGCCTTGTGCTAGG 59.965 55.0 0.00 0.0 42.00 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
80 99 1.350351 AGCTCATCAAGTCCAACAGCT 59.650 47.619 0.00 0.00 0.00 4.24
87 106 1.758440 AAGTCCAACAGCTGCCGAGA 61.758 55.000 15.27 2.66 0.00 4.04
88 107 1.078848 GTCCAACAGCTGCCGAGAT 60.079 57.895 15.27 0.00 0.00 2.75
96 115 0.685785 AGCTGCCGAGATCTCCAAGA 60.686 55.000 17.13 0.00 0.00 3.02
156 195 6.978080 ACAATAAACAAAGCAAACACTACCAG 59.022 34.615 0.00 0.00 0.00 4.00
237 277 8.810652 TTGTTTTTATCTTGTAGGCATTTCAC 57.189 30.769 0.00 0.00 0.00 3.18
310 352 2.543067 GAAGCAGTGGCAGTAGGGGG 62.543 65.000 0.00 0.00 44.61 5.40
418 498 3.311110 AGCTCGTTTGGCTCCGGA 61.311 61.111 2.93 2.93 34.70 5.14
476 561 1.978617 GGTCACCACCAGGCCATTG 60.979 63.158 5.01 0.00 43.17 2.82
539 630 9.942850 TTTTCATCCCCAAATTCTTCTATTTTC 57.057 29.630 0.00 0.00 0.00 2.29
540 631 8.663209 TTCATCCCCAAATTCTTCTATTTTCA 57.337 30.769 0.00 0.00 0.00 2.69
541 632 8.663209 TCATCCCCAAATTCTTCTATTTTCAA 57.337 30.769 0.00 0.00 0.00 2.69
542 633 8.752187 TCATCCCCAAATTCTTCTATTTTCAAG 58.248 33.333 0.00 0.00 0.00 3.02
543 634 8.534496 CATCCCCAAATTCTTCTATTTTCAAGT 58.466 33.333 0.00 0.00 0.00 3.16
544 635 7.895759 TCCCCAAATTCTTCTATTTTCAAGTG 58.104 34.615 0.00 0.00 0.00 3.16
545 636 7.728083 TCCCCAAATTCTTCTATTTTCAAGTGA 59.272 33.333 0.00 0.00 0.00 3.41
546 637 8.031277 CCCCAAATTCTTCTATTTTCAAGTGAG 58.969 37.037 0.00 0.00 0.00 3.51
547 638 8.796475 CCCAAATTCTTCTATTTTCAAGTGAGA 58.204 33.333 0.00 0.00 0.00 3.27
548 639 9.837525 CCAAATTCTTCTATTTTCAAGTGAGAG 57.162 33.333 0.00 0.00 0.00 3.20
549 640 9.339492 CAAATTCTTCTATTTTCAAGTGAGAGC 57.661 33.333 0.00 0.00 0.00 4.09
550 641 7.622893 ATTCTTCTATTTTCAAGTGAGAGCC 57.377 36.000 0.00 0.00 0.00 4.70
551 642 6.114187 TCTTCTATTTTCAAGTGAGAGCCA 57.886 37.500 0.00 0.00 0.00 4.75
552 643 6.715280 TCTTCTATTTTCAAGTGAGAGCCAT 58.285 36.000 0.00 0.00 0.00 4.40
553 644 7.170965 TCTTCTATTTTCAAGTGAGAGCCATT 58.829 34.615 0.00 0.00 0.00 3.16
554 645 8.321353 TCTTCTATTTTCAAGTGAGAGCCATTA 58.679 33.333 0.00 0.00 0.00 1.90
555 646 8.862325 TTCTATTTTCAAGTGAGAGCCATTAA 57.138 30.769 0.00 0.00 0.00 1.40
556 647 9.466497 TTCTATTTTCAAGTGAGAGCCATTAAT 57.534 29.630 0.00 0.00 0.00 1.40
557 648 8.896744 TCTATTTTCAAGTGAGAGCCATTAATG 58.103 33.333 8.58 8.58 0.00 1.90
558 649 6.899393 TTTTCAAGTGAGAGCCATTAATGT 57.101 33.333 14.25 0.00 0.00 2.71
559 650 6.899393 TTTCAAGTGAGAGCCATTAATGTT 57.101 33.333 14.25 2.26 0.00 2.71
560 651 6.899393 TTCAAGTGAGAGCCATTAATGTTT 57.101 33.333 14.25 1.90 0.00 2.83
561 652 7.994425 TTCAAGTGAGAGCCATTAATGTTTA 57.006 32.000 14.25 0.00 0.00 2.01
562 653 8.579850 TTCAAGTGAGAGCCATTAATGTTTAT 57.420 30.769 14.25 0.00 0.00 1.40
563 654 7.988737 TCAAGTGAGAGCCATTAATGTTTATG 58.011 34.615 14.25 0.00 0.00 1.90
564 655 7.828717 TCAAGTGAGAGCCATTAATGTTTATGA 59.171 33.333 14.25 3.94 0.00 2.15
565 656 7.559590 AGTGAGAGCCATTAATGTTTATGAC 57.440 36.000 14.25 4.11 0.00 3.06
566 657 6.543831 AGTGAGAGCCATTAATGTTTATGACC 59.456 38.462 14.25 0.00 0.00 4.02
567 658 5.527214 TGAGAGCCATTAATGTTTATGACCG 59.473 40.000 14.25 0.00 0.00 4.79
568 659 5.680619 AGAGCCATTAATGTTTATGACCGA 58.319 37.500 14.25 0.00 0.00 4.69
569 660 6.299141 AGAGCCATTAATGTTTATGACCGAT 58.701 36.000 14.25 0.00 0.00 4.18
570 661 6.205464 AGAGCCATTAATGTTTATGACCGATG 59.795 38.462 14.25 0.00 0.00 3.84
571 662 4.917415 GCCATTAATGTTTATGACCGATGC 59.083 41.667 14.25 2.24 0.00 3.91
572 663 5.278463 GCCATTAATGTTTATGACCGATGCT 60.278 40.000 14.25 0.00 0.00 3.79
573 664 6.735694 GCCATTAATGTTTATGACCGATGCTT 60.736 38.462 14.25 0.00 0.00 3.91
574 665 6.638063 CCATTAATGTTTATGACCGATGCTTG 59.362 38.462 14.25 0.00 0.00 4.01
575 666 3.698029 ATGTTTATGACCGATGCTTGC 57.302 42.857 0.00 0.00 0.00 4.01
576 667 2.431454 TGTTTATGACCGATGCTTGCA 58.569 42.857 0.00 0.00 0.00 4.08
577 668 2.419673 TGTTTATGACCGATGCTTGCAG 59.580 45.455 0.87 0.00 0.00 4.41
578 669 1.016627 TTATGACCGATGCTTGCAGC 58.983 50.000 0.26 0.26 42.82 5.25
579 670 0.815213 TATGACCGATGCTTGCAGCC 60.815 55.000 5.25 0.00 41.51 4.85
580 671 2.747460 GACCGATGCTTGCAGCCA 60.747 61.111 5.25 0.00 41.51 4.75
581 672 2.282391 ACCGATGCTTGCAGCCAA 60.282 55.556 5.25 0.00 41.51 4.52
591 682 3.221964 CTTGCAGCCAAGTGATAAACC 57.778 47.619 0.00 0.00 42.76 3.27
592 683 1.164411 TGCAGCCAAGTGATAAACCG 58.836 50.000 0.00 0.00 0.00 4.44
593 684 0.179163 GCAGCCAAGTGATAAACCGC 60.179 55.000 0.00 0.00 0.00 5.68
594 685 1.164411 CAGCCAAGTGATAAACCGCA 58.836 50.000 0.00 0.00 0.00 5.69
595 686 1.135689 CAGCCAAGTGATAAACCGCAC 60.136 52.381 0.00 0.00 35.30 5.34
596 687 0.170339 GCCAAGTGATAAACCGCACC 59.830 55.000 0.00 0.00 35.67 5.01
597 688 0.808755 CCAAGTGATAAACCGCACCC 59.191 55.000 0.00 0.00 35.67 4.61
598 689 0.808755 CAAGTGATAAACCGCACCCC 59.191 55.000 0.00 0.00 35.67 4.95
599 690 0.696501 AAGTGATAAACCGCACCCCT 59.303 50.000 0.00 0.00 35.67 4.79
600 691 0.035439 AGTGATAAACCGCACCCCTG 60.035 55.000 0.00 0.00 35.67 4.45
601 692 0.322187 GTGATAAACCGCACCCCTGT 60.322 55.000 0.00 0.00 0.00 4.00
602 693 0.035820 TGATAAACCGCACCCCTGTC 60.036 55.000 0.00 0.00 0.00 3.51
603 694 0.035820 GATAAACCGCACCCCTGTCA 60.036 55.000 0.00 0.00 0.00 3.58
604 695 0.402504 ATAAACCGCACCCCTGTCAA 59.597 50.000 0.00 0.00 0.00 3.18
605 696 0.183014 TAAACCGCACCCCTGTCAAA 59.817 50.000 0.00 0.00 0.00 2.69
606 697 0.684805 AAACCGCACCCCTGTCAAAA 60.685 50.000 0.00 0.00 0.00 2.44
607 698 1.106944 AACCGCACCCCTGTCAAAAG 61.107 55.000 0.00 0.00 0.00 2.27
608 699 2.268076 CCGCACCCCTGTCAAAAGG 61.268 63.158 0.00 0.00 37.05 3.11
609 700 2.919494 CGCACCCCTGTCAAAAGGC 61.919 63.158 0.00 0.00 35.85 4.35
610 701 1.531602 GCACCCCTGTCAAAAGGCT 60.532 57.895 0.00 0.00 35.85 4.58
611 702 0.251165 GCACCCCTGTCAAAAGGCTA 60.251 55.000 0.00 0.00 35.85 3.93
612 703 1.826385 CACCCCTGTCAAAAGGCTAG 58.174 55.000 0.00 0.00 35.85 3.42
613 704 1.351017 CACCCCTGTCAAAAGGCTAGA 59.649 52.381 0.00 0.00 35.85 2.43
614 705 2.062636 ACCCCTGTCAAAAGGCTAGAA 58.937 47.619 0.00 0.00 35.85 2.10
615 706 2.649816 ACCCCTGTCAAAAGGCTAGAAT 59.350 45.455 0.00 0.00 35.85 2.40
616 707 3.076032 ACCCCTGTCAAAAGGCTAGAATT 59.924 43.478 0.00 0.00 35.85 2.17
617 708 3.696548 CCCCTGTCAAAAGGCTAGAATTC 59.303 47.826 0.00 0.00 35.85 2.17
618 709 4.568592 CCCCTGTCAAAAGGCTAGAATTCT 60.569 45.833 13.56 13.56 35.85 2.40
619 710 4.397417 CCCTGTCAAAAGGCTAGAATTCTG 59.603 45.833 18.47 9.08 35.85 3.02
620 711 4.397417 CCTGTCAAAAGGCTAGAATTCTGG 59.603 45.833 18.47 16.23 0.00 3.86
621 712 5.241403 TGTCAAAAGGCTAGAATTCTGGA 57.759 39.130 21.83 0.17 0.00 3.86
622 713 5.630121 TGTCAAAAGGCTAGAATTCTGGAA 58.370 37.500 21.83 0.00 0.00 3.53
623 714 5.707298 TGTCAAAAGGCTAGAATTCTGGAAG 59.293 40.000 21.83 10.79 0.00 3.46
624 715 5.940470 GTCAAAAGGCTAGAATTCTGGAAGA 59.060 40.000 21.83 7.00 44.68 2.87
625 716 6.601217 GTCAAAAGGCTAGAATTCTGGAAGAT 59.399 38.462 21.83 2.85 46.36 2.40
626 717 7.121907 GTCAAAAGGCTAGAATTCTGGAAGATT 59.878 37.037 21.83 8.38 46.36 2.40
627 718 7.337942 TCAAAAGGCTAGAATTCTGGAAGATTC 59.662 37.037 21.83 3.47 46.36 2.52
628 719 6.573712 AAGGCTAGAATTCTGGAAGATTCT 57.426 37.500 21.83 6.07 46.36 2.40
629 720 6.573712 AGGCTAGAATTCTGGAAGATTCTT 57.426 37.500 21.83 0.00 46.36 2.52
630 721 6.591001 AGGCTAGAATTCTGGAAGATTCTTC 58.409 40.000 21.83 16.58 46.36 2.87
631 722 6.386635 AGGCTAGAATTCTGGAAGATTCTTCT 59.613 38.462 21.83 5.06 46.36 2.85
632 723 7.566879 AGGCTAGAATTCTGGAAGATTCTTCTA 59.433 37.037 21.83 17.07 46.36 2.10
633 724 8.207545 GGCTAGAATTCTGGAAGATTCTTCTAA 58.792 37.037 21.83 15.46 46.36 2.10
634 725 9.777297 GCTAGAATTCTGGAAGATTCTTCTAAT 57.223 33.333 21.83 16.66 46.36 1.73
702 793 9.710979 TTCTTCTTAGTTGTAAATGTTGTTTCG 57.289 29.630 0.00 0.00 0.00 3.46
703 794 8.339714 TCTTCTTAGTTGTAAATGTTGTTTCGG 58.660 33.333 0.00 0.00 0.00 4.30
704 795 7.789273 TCTTAGTTGTAAATGTTGTTTCGGA 57.211 32.000 0.00 0.00 0.00 4.55
705 796 8.211116 TCTTAGTTGTAAATGTTGTTTCGGAA 57.789 30.769 0.00 0.00 0.00 4.30
706 797 8.124199 TCTTAGTTGTAAATGTTGTTTCGGAAC 58.876 33.333 0.00 0.00 36.29 3.62
707 798 6.445357 AGTTGTAAATGTTGTTTCGGAACT 57.555 33.333 8.32 0.00 36.70 3.01
708 799 6.859017 AGTTGTAAATGTTGTTTCGGAACTT 58.141 32.000 8.32 0.00 36.70 2.66
709 800 7.317390 AGTTGTAAATGTTGTTTCGGAACTTT 58.683 30.769 8.32 2.60 36.70 2.66
710 801 8.460428 AGTTGTAAATGTTGTTTCGGAACTTTA 58.540 29.630 8.32 1.61 36.70 1.85
711 802 8.525876 GTTGTAAATGTTGTTTCGGAACTTTAC 58.474 33.333 16.58 16.58 36.70 2.01
712 803 7.987649 TGTAAATGTTGTTTCGGAACTTTACT 58.012 30.769 20.85 3.16 36.70 2.24
713 804 8.124199 TGTAAATGTTGTTTCGGAACTTTACTC 58.876 33.333 20.85 5.72 36.70 2.59
714 805 6.687081 AATGTTGTTTCGGAACTTTACTCA 57.313 33.333 8.32 0.00 36.70 3.41
715 806 6.687081 ATGTTGTTTCGGAACTTTACTCAA 57.313 33.333 8.32 0.00 36.70 3.02
716 807 6.687081 TGTTGTTTCGGAACTTTACTCAAT 57.313 33.333 8.32 0.00 36.70 2.57
717 808 6.491394 TGTTGTTTCGGAACTTTACTCAATG 58.509 36.000 8.32 0.00 36.70 2.82
718 809 6.094325 TGTTGTTTCGGAACTTTACTCAATGT 59.906 34.615 8.32 0.00 36.70 2.71
719 810 6.687081 TGTTTCGGAACTTTACTCAATGTT 57.313 33.333 8.32 0.00 36.70 2.71
720 811 7.090953 TGTTTCGGAACTTTACTCAATGTTT 57.909 32.000 8.32 0.00 36.70 2.83
721 812 6.970043 TGTTTCGGAACTTTACTCAATGTTTG 59.030 34.615 8.32 0.00 36.70 2.93
722 813 5.682943 TCGGAACTTTACTCAATGTTTGG 57.317 39.130 0.00 0.00 33.49 3.28
723 814 4.023536 TCGGAACTTTACTCAATGTTTGGC 60.024 41.667 0.00 0.00 33.49 4.52
724 815 4.261405 CGGAACTTTACTCAATGTTTGGCA 60.261 41.667 0.00 0.00 33.49 4.92
725 816 5.596845 GGAACTTTACTCAATGTTTGGCAA 58.403 37.500 0.00 0.00 33.49 4.52
726 817 5.462068 GGAACTTTACTCAATGTTTGGCAAC 59.538 40.000 0.00 0.00 33.49 4.17
727 818 5.852282 ACTTTACTCAATGTTTGGCAACT 57.148 34.783 0.00 0.00 33.58 3.16
728 819 5.831997 ACTTTACTCAATGTTTGGCAACTC 58.168 37.500 0.00 0.00 33.58 3.01
729 820 5.359576 ACTTTACTCAATGTTTGGCAACTCA 59.640 36.000 0.00 2.84 33.58 3.41
730 821 5.843673 TTACTCAATGTTTGGCAACTCAA 57.156 34.783 0.00 0.00 33.58 3.02
731 822 4.734398 ACTCAATGTTTGGCAACTCAAA 57.266 36.364 0.00 0.00 34.64 2.69
732 823 5.083533 ACTCAATGTTTGGCAACTCAAAA 57.916 34.783 0.00 0.00 38.21 2.44
733 824 5.673514 ACTCAATGTTTGGCAACTCAAAAT 58.326 33.333 0.00 0.00 38.21 1.82
734 825 5.524646 ACTCAATGTTTGGCAACTCAAAATG 59.475 36.000 0.00 4.64 38.21 2.32
735 826 4.815308 TCAATGTTTGGCAACTCAAAATGG 59.185 37.500 0.00 0.00 38.21 3.16
736 827 4.686191 ATGTTTGGCAACTCAAAATGGA 57.314 36.364 0.00 0.00 38.21 3.41
737 828 4.478206 TGTTTGGCAACTCAAAATGGAA 57.522 36.364 0.00 0.00 38.21 3.53
738 829 4.187694 TGTTTGGCAACTCAAAATGGAAC 58.812 39.130 0.00 0.00 38.21 3.62
739 830 4.081198 TGTTTGGCAACTCAAAATGGAACT 60.081 37.500 0.00 0.00 38.21 3.01
740 831 4.751767 TTGGCAACTCAAAATGGAACTT 57.248 36.364 0.00 0.00 37.61 2.66
741 832 4.320608 TGGCAACTCAAAATGGAACTTC 57.679 40.909 0.00 0.00 37.61 3.01
742 833 3.243367 TGGCAACTCAAAATGGAACTTCG 60.243 43.478 0.00 0.00 37.61 3.79
743 834 3.243401 GGCAACTCAAAATGGAACTTCGT 60.243 43.478 0.00 0.00 0.00 3.85
744 835 4.023536 GGCAACTCAAAATGGAACTTCGTA 60.024 41.667 0.00 0.00 0.00 3.43
745 836 5.335661 GGCAACTCAAAATGGAACTTCGTAT 60.336 40.000 0.00 0.00 0.00 3.06
746 837 6.128117 GGCAACTCAAAATGGAACTTCGTATA 60.128 38.462 0.00 0.00 0.00 1.47
747 838 6.741358 GCAACTCAAAATGGAACTTCGTATAC 59.259 38.462 0.00 0.00 0.00 1.47
748 839 7.360946 GCAACTCAAAATGGAACTTCGTATACT 60.361 37.037 0.56 0.00 0.00 2.12
749 840 8.504005 CAACTCAAAATGGAACTTCGTATACTT 58.496 33.333 0.56 0.00 0.00 2.24
750 841 8.617290 ACTCAAAATGGAACTTCGTATACTTT 57.383 30.769 0.56 0.00 0.00 2.66
751 842 9.063615 ACTCAAAATGGAACTTCGTATACTTTT 57.936 29.630 0.56 0.00 0.00 2.27
752 843 9.893305 CTCAAAATGGAACTTCGTATACTTTTT 57.107 29.630 0.56 0.00 0.00 1.94
776 867 9.796062 TTTTTACTTACTACGCAAAGAAATACG 57.204 29.630 0.00 0.00 0.00 3.06
777 868 8.519492 TTTACTTACTACGCAAAGAAATACGT 57.481 30.769 0.00 0.00 42.22 3.57
778 869 6.385537 ACTTACTACGCAAAGAAATACGTG 57.614 37.500 0.00 0.00 39.43 4.49
779 870 5.922544 ACTTACTACGCAAAGAAATACGTGT 59.077 36.000 0.00 0.00 39.43 4.49
780 871 7.083858 ACTTACTACGCAAAGAAATACGTGTA 58.916 34.615 0.00 0.00 39.43 2.90
781 872 7.594758 ACTTACTACGCAAAGAAATACGTGTAA 59.405 33.333 0.00 0.00 39.43 2.41
782 873 6.144577 ACTACGCAAAGAAATACGTGTAAC 57.855 37.500 0.00 0.00 39.43 2.50
783 874 5.922544 ACTACGCAAAGAAATACGTGTAACT 59.077 36.000 0.00 0.00 39.43 2.24
784 875 5.260027 ACGCAAAGAAATACGTGTAACTC 57.740 39.130 0.00 0.00 37.37 3.01
785 876 4.986659 ACGCAAAGAAATACGTGTAACTCT 59.013 37.500 0.00 0.00 37.37 3.24
786 877 5.464389 ACGCAAAGAAATACGTGTAACTCTT 59.536 36.000 0.00 0.00 37.37 2.85
787 878 6.642131 ACGCAAAGAAATACGTGTAACTCTTA 59.358 34.615 0.00 0.00 37.37 2.10
788 879 7.148853 ACGCAAAGAAATACGTGTAACTCTTAG 60.149 37.037 0.00 0.60 37.37 2.18
789 880 7.148853 CGCAAAGAAATACGTGTAACTCTTAGT 60.149 37.037 0.00 0.00 31.75 2.24
790 881 9.132521 GCAAAGAAATACGTGTAACTCTTAGTA 57.867 33.333 0.00 0.00 31.75 1.82
820 911 4.047834 TGTCGAGGACACGTACGT 57.952 55.556 16.72 16.72 37.67 3.57
821 912 3.209266 TGTCGAGGACACGTACGTA 57.791 52.632 22.34 0.00 37.67 3.57
822 913 1.725641 TGTCGAGGACACGTACGTAT 58.274 50.000 22.34 10.64 37.67 3.06
823 914 2.887337 TGTCGAGGACACGTACGTATA 58.113 47.619 22.34 0.00 37.67 1.47
824 915 2.860136 TGTCGAGGACACGTACGTATAG 59.140 50.000 22.34 11.73 37.67 1.31
825 916 2.860735 GTCGAGGACACGTACGTATAGT 59.139 50.000 22.34 15.22 32.09 2.12
826 917 2.860136 TCGAGGACACGTACGTATAGTG 59.140 50.000 22.34 23.63 41.28 2.74
851 942 2.877043 AAAAGAGTGGACACGTACGT 57.123 45.000 16.72 16.72 36.20 3.57
852 943 3.988379 AAAAGAGTGGACACGTACGTA 57.012 42.857 22.34 1.84 36.20 3.57
853 944 4.510038 AAAAGAGTGGACACGTACGTAT 57.490 40.909 22.34 10.64 36.20 3.06
854 945 5.627499 AAAAGAGTGGACACGTACGTATA 57.373 39.130 22.34 4.79 36.20 1.47
855 946 5.824904 AAAGAGTGGACACGTACGTATAT 57.175 39.130 22.34 9.73 36.20 0.86
856 947 5.415415 AAGAGTGGACACGTACGTATATC 57.585 43.478 22.34 17.74 36.20 1.63
857 948 4.445453 AGAGTGGACACGTACGTATATCA 58.555 43.478 22.34 13.80 36.20 2.15
858 949 4.510711 AGAGTGGACACGTACGTATATCAG 59.489 45.833 22.34 10.15 36.20 2.90
859 950 3.562973 AGTGGACACGTACGTATATCAGG 59.437 47.826 22.34 9.38 36.20 3.86
860 951 3.313526 GTGGACACGTACGTATATCAGGT 59.686 47.826 22.34 12.84 0.00 4.00
861 952 3.313249 TGGACACGTACGTATATCAGGTG 59.687 47.826 22.34 7.89 0.00 4.00
862 953 3.561310 GGACACGTACGTATATCAGGTGA 59.439 47.826 22.34 0.00 0.00 4.02
863 954 4.214971 GGACACGTACGTATATCAGGTGAT 59.785 45.833 22.34 0.00 38.51 3.06
864 955 5.104562 ACACGTACGTATATCAGGTGATG 57.895 43.478 22.34 6.36 36.05 3.07
865 956 4.577693 ACACGTACGTATATCAGGTGATGT 59.422 41.667 22.34 7.04 36.05 3.06
866 957 5.066893 ACACGTACGTATATCAGGTGATGTT 59.933 40.000 22.34 0.00 36.05 2.71
867 958 5.975344 CACGTACGTATATCAGGTGATGTTT 59.025 40.000 22.34 0.00 36.05 2.83
868 959 6.474427 CACGTACGTATATCAGGTGATGTTTT 59.526 38.462 22.34 0.00 36.05 2.43
869 960 7.644945 CACGTACGTATATCAGGTGATGTTTTA 59.355 37.037 22.34 0.00 36.05 1.52
870 961 7.645340 ACGTACGTATATCAGGTGATGTTTTAC 59.355 37.037 21.41 0.17 36.05 2.01
871 962 7.149240 CGTACGTATATCAGGTGATGTTTTACG 60.149 40.741 7.22 16.51 37.00 3.18
872 963 5.981315 ACGTATATCAGGTGATGTTTTACGG 59.019 40.000 19.34 9.87 36.27 4.02
873 964 5.107607 CGTATATCAGGTGATGTTTTACGGC 60.108 44.000 2.56 0.00 36.05 5.68
874 965 1.434555 TCAGGTGATGTTTTACGGCG 58.565 50.000 4.80 4.80 0.00 6.46
875 966 0.446222 CAGGTGATGTTTTACGGCGG 59.554 55.000 13.24 0.00 0.00 6.13
896 987 1.374560 CCTTGTTGTGTTCGTGTCCA 58.625 50.000 0.00 0.00 0.00 4.02
910 1001 3.194968 TCGTGTCCATCTAGGTTTCCTTC 59.805 47.826 0.00 0.00 39.02 3.46
912 1003 4.401519 CGTGTCCATCTAGGTTTCCTTCTA 59.598 45.833 0.00 0.00 39.02 2.10
917 1014 5.897824 TCCATCTAGGTTTCCTTCTACGATT 59.102 40.000 0.00 0.00 39.02 3.34
921 1018 4.903045 AGGTTTCCTTCTACGATTGGAA 57.097 40.909 0.00 0.00 36.87 3.53
948 1056 6.384015 CCCTGGTCAATGCTGATATATACCTA 59.616 42.308 0.00 0.00 33.05 3.08
958 1068 5.106277 GCTGATATATACCTAGTGTGCACGA 60.106 44.000 13.13 0.00 36.20 4.35
964 1079 1.070134 ACCTAGTGTGCACGATGTGTT 59.930 47.619 13.13 0.00 35.75 3.32
975 1090 1.635663 CGATGTGTTCGCCTCCCAAC 61.636 60.000 0.00 0.00 41.69 3.77
977 1092 2.029964 GTGTTCGCCTCCCAACGA 59.970 61.111 0.00 0.00 36.32 3.85
987 1102 0.457853 CTCCCAACGAAAGCGATCGA 60.458 55.000 21.57 0.00 45.48 3.59
1137 1269 3.141449 TGGCGAGCCATCATCGAT 58.859 55.556 13.49 0.00 42.76 3.59
1155 1287 1.194781 ATGGTGAGAACCTCCTGCGT 61.195 55.000 0.00 0.00 0.00 5.24
1168 1300 2.805546 TGCGTACAGATCTCCCGC 59.194 61.111 18.40 18.40 44.27 6.13
1193 1325 2.778299 CGGGTTCTTCATCACCTTCAA 58.222 47.619 0.00 0.00 33.09 2.69
1392 1554 3.729698 GTTAACCCGGCCACACGC 61.730 66.667 2.24 0.00 0.00 5.34
1402 1564 3.055719 CCACACGCCGCTGGAAAT 61.056 61.111 0.00 0.00 0.00 2.17
1417 1579 1.409241 GGAAATCTCTGCCCTCATGCA 60.409 52.381 0.00 0.00 39.37 3.96
1434 1596 0.800683 GCACGCGCAGTCATACTACA 60.801 55.000 5.73 0.00 38.36 2.74
1436 1598 0.525668 ACGCGCAGTCATACTACAGC 60.526 55.000 5.73 0.00 0.00 4.40
1447 1609 0.761702 TACTACAGCCGGGGGAATCC 60.762 60.000 2.18 0.00 0.00 3.01
1461 1623 3.211865 GGGAATCCTCCGTGGTATTTTC 58.788 50.000 0.00 0.00 43.51 2.29
1463 1625 4.127907 GGAATCCTCCGTGGTATTTTCTC 58.872 47.826 0.00 0.00 37.07 2.87
1465 1627 1.479323 TCCTCCGTGGTATTTTCTCCG 59.521 52.381 0.00 0.00 37.07 4.63
1468 1630 3.381949 CTCCGTGGTATTTTCTCCGATC 58.618 50.000 0.00 0.00 0.00 3.69
1473 1635 5.176958 CCGTGGTATTTTCTCCGATCATTAC 59.823 44.000 0.00 0.00 0.00 1.89
1524 1686 3.244911 CCCACTACCAGGTGTTTCAGATT 60.245 47.826 0.76 0.00 35.63 2.40
1541 1715 2.427095 AGATTCCTTATTTGCGTTGGGC 59.573 45.455 0.00 0.00 43.96 5.36
1604 1796 4.691175 CCTCCATCTCCATATATCTTGCG 58.309 47.826 0.00 0.00 0.00 4.85
1617 1809 8.031864 CCATATATCTTGCGTGTATTCTCTTCT 58.968 37.037 0.00 0.00 0.00 2.85
1626 1818 5.369833 CGTGTATTCTCTTCTAGGAGAGGA 58.630 45.833 25.16 19.16 42.73 3.71
1653 1845 2.484947 GGAGGAGAGGTTGTTTGTTCGT 60.485 50.000 0.00 0.00 0.00 3.85
1696 1888 2.576002 GCAAAGGCGCGTGTGTTTG 61.576 57.895 20.55 13.84 33.81 2.93
1697 1889 1.943693 CAAAGGCGCGTGTGTTTGG 60.944 57.895 12.13 0.00 0.00 3.28
1699 1891 1.096386 AAAGGCGCGTGTGTTTGGTA 61.096 50.000 8.43 0.00 0.00 3.25
1700 1892 0.887387 AAGGCGCGTGTGTTTGGTAT 60.887 50.000 8.43 0.00 0.00 2.73
1828 2037 5.010012 AGTGTTCAGTTTTGCCCTAATGAAG 59.990 40.000 0.00 0.00 0.00 3.02
1840 2051 4.728772 CCCTAATGAAGGCATTATCCACA 58.271 43.478 0.00 0.00 43.85 4.17
1841 2052 4.520492 CCCTAATGAAGGCATTATCCACAC 59.480 45.833 0.00 0.00 43.85 3.82
1845 2056 2.308570 TGAAGGCATTATCCACACCTGT 59.691 45.455 0.00 0.00 0.00 4.00
1848 2059 4.357918 AGGCATTATCCACACCTGTATC 57.642 45.455 0.00 0.00 0.00 2.24
1871 2085 7.894376 TCTCAAAAATTTCTTGCCAATGATC 57.106 32.000 0.00 0.00 0.00 2.92
1929 2144 4.771577 ACAATGTGATTAAGCCACCAATGA 59.228 37.500 7.92 0.00 33.80 2.57
2009 2227 7.697710 TCATTTGTTAAGAATCACATTCGCATC 59.302 33.333 0.00 0.00 43.92 3.91
2034 2252 8.522830 TCTGTATACTGAATGAATCATGCGATA 58.477 33.333 9.78 0.00 37.44 2.92
2071 2289 9.640963 GATATTAAAGCACGACTATGACCTTAT 57.359 33.333 0.00 0.00 0.00 1.73
2072 2290 9.998106 ATATTAAAGCACGACTATGACCTTATT 57.002 29.630 0.00 0.00 0.00 1.40
2078 2296 5.597806 CACGACTATGACCTTATTAAGCCA 58.402 41.667 0.00 0.00 0.00 4.75
2095 2313 3.499338 AGCCAATGGAAGTGTTTGATCA 58.501 40.909 2.05 0.00 0.00 2.92
2156 2377 7.206687 ACTATGGAATCTTTCGTTCTCATCTC 58.793 38.462 0.00 0.00 0.00 2.75
2213 2437 2.074547 TTGAATGGAACTCCGACGAC 57.925 50.000 0.00 0.00 39.43 4.34
2223 2447 1.743958 ACTCCGACGACGATGATTTCT 59.256 47.619 9.28 0.00 42.66 2.52
2224 2448 2.112522 CTCCGACGACGATGATTTCTG 58.887 52.381 9.28 0.00 42.66 3.02
2448 2672 3.369471 CGACTCTGGCCTTCCTAATGAAA 60.369 47.826 3.32 0.00 31.06 2.69
2505 2729 1.486726 GTTGGATCGAAGAGACCCCAT 59.513 52.381 0.00 0.00 43.63 4.00
2535 2759 7.773149 AGTGAATTAATCTGTAGTAGCTCGTT 58.227 34.615 0.00 0.00 0.00 3.85
2554 2784 9.710900 AGCTCGTTTCAAACATGATCATATATA 57.289 29.630 8.15 0.00 0.00 0.86
2634 2877 8.969260 ACTATCATTGCTACTGATCAATTCAA 57.031 30.769 0.00 0.00 35.12 2.69
2636 2879 6.441093 TCATTGCTACTGATCAATTCAACC 57.559 37.500 0.00 0.00 32.78 3.77
2637 2880 4.944962 TTGCTACTGATCAATTCAACCG 57.055 40.909 0.00 0.00 32.78 4.44
2639 2882 2.614057 GCTACTGATCAATTCAACCGGG 59.386 50.000 6.32 0.00 32.78 5.73
2640 2883 1.463674 ACTGATCAATTCAACCGGGC 58.536 50.000 6.32 0.00 32.78 6.13
2642 2885 1.029408 TGATCAATTCAACCGGGCGG 61.029 55.000 6.32 0.00 42.03 6.13
2643 2886 2.336400 GATCAATTCAACCGGGCGGC 62.336 60.000 6.32 0.00 39.32 6.53
2644 2887 3.369400 CAATTCAACCGGGCGGCA 61.369 61.111 12.47 0.00 39.32 5.69
2645 2888 2.362375 AATTCAACCGGGCGGCAT 60.362 55.556 12.47 0.00 39.32 4.40
2647 2890 3.636929 ATTCAACCGGGCGGCATGA 62.637 57.895 12.47 6.61 39.32 3.07
2654 2897 4.424711 GGGCGGCATGACCCAAGA 62.425 66.667 12.47 0.00 46.22 3.02
2655 2898 2.124151 GGCGGCATGACCCAAGAT 60.124 61.111 3.07 0.00 33.26 2.40
2656 2899 2.484062 GGCGGCATGACCCAAGATG 61.484 63.158 3.07 0.00 33.26 2.90
2658 2901 1.224315 CGGCATGACCCAAGATGGA 59.776 57.895 0.00 0.00 40.96 3.41
2660 2903 1.613836 GGCATGACCCAAGATGGATC 58.386 55.000 0.00 0.00 40.96 3.36
2662 2905 1.475751 GCATGACCCAAGATGGATCGT 60.476 52.381 0.00 0.00 40.96 3.73
2663 2906 2.923121 CATGACCCAAGATGGATCGTT 58.077 47.619 0.00 0.00 40.96 3.85
2665 2908 3.433306 TGACCCAAGATGGATCGTTTT 57.567 42.857 0.00 0.00 40.96 2.43
2666 2909 3.761897 TGACCCAAGATGGATCGTTTTT 58.238 40.909 0.00 0.00 40.96 1.94
2684 3041 4.662468 TTTTTCATGTTTGTGGCTAGCA 57.338 36.364 18.24 0.00 0.00 3.49
2691 3048 2.813754 TGTTTGTGGCTAGCAACATCTC 59.186 45.455 25.41 17.51 28.89 2.75
2693 3050 0.253044 TGTGGCTAGCAACATCTCCC 59.747 55.000 21.38 0.00 0.00 4.30
2695 3052 0.991146 TGGCTAGCAACATCTCCCAA 59.009 50.000 18.24 0.00 0.00 4.12
2699 3057 3.565902 GGCTAGCAACATCTCCCAATTAC 59.434 47.826 18.24 0.00 0.00 1.89
2705 3063 4.202182 GCAACATCTCCCAATTACATGCAT 60.202 41.667 0.00 0.00 0.00 3.96
2708 3066 4.340097 ACATCTCCCAATTACATGCATGTG 59.660 41.667 36.72 22.25 41.89 3.21
2710 3068 1.404748 TCCCAATTACATGCATGTGCG 59.595 47.619 36.72 22.54 45.83 5.34
2717 3075 2.569657 ATGCATGTGCGTGCTTGG 59.430 55.556 16.09 0.00 45.27 3.61
2719 3077 3.364441 GCATGTGCGTGCTTGGGA 61.364 61.111 8.95 0.00 41.82 4.37
2720 3078 2.872557 CATGTGCGTGCTTGGGAG 59.127 61.111 0.00 0.00 0.00 4.30
2722 3080 3.925630 ATGTGCGTGCTTGGGAGGG 62.926 63.158 0.00 0.00 0.00 4.30
2724 3082 4.641645 TGCGTGCTTGGGAGGGTG 62.642 66.667 0.00 0.00 0.00 4.61
2730 3088 4.785453 CTTGGGAGGGTGCGCTCC 62.785 72.222 20.16 20.16 38.96 4.70
2743 3101 3.474570 GCTCCAGCCGGTCCTCAT 61.475 66.667 1.90 0.00 34.31 2.90
2744 3102 3.036429 GCTCCAGCCGGTCCTCATT 62.036 63.158 1.90 0.00 34.31 2.57
2745 3103 1.153289 CTCCAGCCGGTCCTCATTG 60.153 63.158 1.90 0.00 0.00 2.82
2746 3104 1.903877 CTCCAGCCGGTCCTCATTGT 61.904 60.000 1.90 0.00 0.00 2.71
2747 3105 0.616395 TCCAGCCGGTCCTCATTGTA 60.616 55.000 1.90 0.00 0.00 2.41
2749 3107 0.537188 CAGCCGGTCCTCATTGTAGT 59.463 55.000 1.90 0.00 0.00 2.73
2750 3108 0.537188 AGCCGGTCCTCATTGTAGTG 59.463 55.000 1.90 0.00 0.00 2.74
2751 3109 0.249398 GCCGGTCCTCATTGTAGTGT 59.751 55.000 1.90 0.00 0.00 3.55
2752 3110 1.739371 GCCGGTCCTCATTGTAGTGTC 60.739 57.143 1.90 0.00 0.00 3.67
2754 3112 2.417379 CCGGTCCTCATTGTAGTGTCTG 60.417 54.545 0.00 0.00 0.00 3.51
2755 3113 2.231478 CGGTCCTCATTGTAGTGTCTGT 59.769 50.000 0.00 0.00 0.00 3.41
2756 3114 3.673594 CGGTCCTCATTGTAGTGTCTGTC 60.674 52.174 0.00 0.00 0.00 3.51
2757 3115 3.502920 GTCCTCATTGTAGTGTCTGTCG 58.497 50.000 0.00 0.00 0.00 4.35
2759 3117 3.190744 TCCTCATTGTAGTGTCTGTCGAC 59.809 47.826 9.11 9.11 40.64 4.20
2765 3123 4.767633 GTGTCTGTCGACGCCTAG 57.232 61.111 11.62 2.44 43.24 3.02
2769 3127 1.969589 TCTGTCGACGCCTAGCACA 60.970 57.895 11.62 0.00 0.00 4.57
2770 3128 1.080772 CTGTCGACGCCTAGCACAA 60.081 57.895 11.62 0.00 0.00 3.33
2772 3130 1.805945 GTCGACGCCTAGCACAAGG 60.806 63.158 0.00 0.00 39.87 3.61
2783 3141 1.227943 GCACAAGGCACTGACAGGA 60.228 57.895 7.51 0.00 40.86 3.86
2799 3157 4.100963 TGACAGGATACGTAAGATTGGCAT 59.899 41.667 0.00 0.00 46.39 4.40
2806 3164 2.016318 CGTAAGATTGGCATTGGCTCA 58.984 47.619 11.84 0.00 39.38 4.26
2807 3165 2.423185 CGTAAGATTGGCATTGGCTCAA 59.577 45.455 11.84 0.00 39.38 3.02
2833 3191 1.445582 CTGGTGGTTAGTCGACGGC 60.446 63.158 10.46 4.24 0.00 5.68
2845 3208 2.511600 GACGGCAGTAGCGGCAAT 60.512 61.111 1.45 0.00 44.14 3.56
2858 3221 0.247145 CGGCAATAACAACGAGCGAC 60.247 55.000 0.00 0.00 0.00 5.19
2860 3223 0.247145 GCAATAACAACGAGCGACCG 60.247 55.000 0.00 0.00 0.00 4.79
2866 3229 2.049433 AACGAGCGACCGGTTGAG 60.049 61.111 26.69 17.02 0.00 3.02
2878 3241 4.329545 GTTGAGGAGGTGCCGCCA 62.330 66.667 13.34 0.00 43.43 5.69
2880 3243 3.626996 TTGAGGAGGTGCCGCCATG 62.627 63.158 13.34 0.00 43.43 3.66
2889 3252 0.179073 GTGCCGCCATGTAGTGAGAT 60.179 55.000 0.00 0.00 0.00 2.75
2917 3347 2.042639 GGCATGGCCCATCTTGGT 60.043 61.111 8.35 0.00 44.06 3.67
2938 4165 0.250295 CCGTTGTCACCACCACATCT 60.250 55.000 0.00 0.00 0.00 2.90
2939 4166 1.148310 CGTTGTCACCACCACATCTC 58.852 55.000 0.00 0.00 0.00 2.75
2988 4226 5.010012 TGAAGCTGCTATGATATTCGACTCA 59.990 40.000 0.90 0.00 0.00 3.41
3008 4462 0.465460 TCTGTGAGTTTTGGCGGCTT 60.465 50.000 11.43 0.00 0.00 4.35
3057 4511 7.064253 GGCAGCGAGATATAATTTATAAACGGT 59.936 37.037 0.00 13.60 0.00 4.83
3073 4527 1.545582 ACGGTGATTTGATGCAAAGGG 59.454 47.619 0.00 0.00 36.76 3.95
3097 4551 1.300311 TTGTGTAGTGGTGGCGACG 60.300 57.895 0.00 0.00 0.00 5.12
3098 4552 1.736365 TTGTGTAGTGGTGGCGACGA 61.736 55.000 0.00 0.00 0.00 4.20
3102 4556 0.997196 GTAGTGGTGGCGACGATTTC 59.003 55.000 0.00 0.00 0.00 2.17
3107 4561 1.754803 TGGTGGCGACGATTTCTATCT 59.245 47.619 0.00 0.00 0.00 1.98
3113 4567 3.444916 GCGACGATTTCTATCTGACCAA 58.555 45.455 0.00 0.00 0.00 3.67
3123 4577 9.717942 GATTTCTATCTGACCAAATGTAGCTAT 57.282 33.333 0.00 0.00 0.00 2.97
3149 4720 2.028130 TCGTGAAAAAGTGGTGGCAAT 58.972 42.857 0.00 0.00 0.00 3.56
3163 4734 4.710865 TGGTGGCAATAACACATGATTGAT 59.289 37.500 0.00 0.00 40.54 2.57
3191 4763 3.290948 TGGTTGTGCTTTTCAGTACCT 57.709 42.857 0.00 0.00 34.82 3.08
3200 4772 3.562557 GCTTTTCAGTACCTGGTTTCGAA 59.437 43.478 3.84 2.47 31.51 3.71
3205 4777 1.959282 AGTACCTGGTTTCGAACTCGT 59.041 47.619 3.84 0.00 40.80 4.18
3206 4778 2.056577 GTACCTGGTTTCGAACTCGTG 58.943 52.381 3.84 0.00 40.80 4.35
3252 4824 4.447034 CCATGTGGGTTATACCTGGCAATA 60.447 45.833 0.00 0.00 38.64 1.90
3253 4825 4.431416 TGTGGGTTATACCTGGCAATAG 57.569 45.455 0.00 0.00 38.64 1.73
3255 4827 2.780592 TGGGTTATACCTGGCAATAGCA 59.219 45.455 0.00 0.00 39.70 3.49
3258 4830 4.832823 GGGTTATACCTGGCAATAGCAATT 59.167 41.667 0.00 0.00 39.70 2.32
3310 5306 2.172505 TGCTTGGACTTGTTCTTCAGGA 59.827 45.455 0.00 0.00 0.00 3.86
3327 6437 4.996793 TCAGGATGAAAACCTTGAATCCA 58.003 39.130 3.06 0.00 45.97 3.41
3329 6439 5.012239 CAGGATGAAAACCTTGAATCCAGA 58.988 41.667 3.06 0.00 34.12 3.86
3332 6442 5.124617 GGATGAAAACCTTGAATCCAGACTC 59.875 44.000 0.00 0.00 37.37 3.36
3343 6453 2.743928 CAGACTCTGGCGGTTGGC 60.744 66.667 0.00 0.00 42.51 4.52
3356 6466 2.158959 GTTGGCTCCGATGACGACG 61.159 63.158 0.00 0.00 42.66 5.12
3364 6474 0.802222 CCGATGACGACGATGCTTGT 60.802 55.000 0.00 0.00 42.66 3.16
3375 6561 3.128349 ACGATGCTTGTACGTTGTTTCT 58.872 40.909 0.00 0.00 36.91 2.52
3385 6571 6.971527 TGTACGTTGTTTCTTTCTTGAAGA 57.028 33.333 0.00 0.00 42.56 2.87
3386 6572 7.548196 TGTACGTTGTTTCTTTCTTGAAGAT 57.452 32.000 0.00 0.00 43.65 2.40
3424 6610 7.490962 AACATCGTTGTTCTGAGTCAATAAA 57.509 32.000 6.04 0.00 42.43 1.40
3425 6611 7.121974 ACATCGTTGTTCTGAGTCAATAAAG 57.878 36.000 0.00 0.00 29.55 1.85
3426 6612 6.706270 ACATCGTTGTTCTGAGTCAATAAAGT 59.294 34.615 0.00 0.00 29.55 2.66
3428 6614 7.633361 TCGTTGTTCTGAGTCAATAAAGTAC 57.367 36.000 0.00 0.00 0.00 2.73
3429 6615 7.204604 TCGTTGTTCTGAGTCAATAAAGTACA 58.795 34.615 0.00 0.00 0.00 2.90
3431 6617 7.568861 CGTTGTTCTGAGTCAATAAAGTACACC 60.569 40.741 0.00 0.00 0.00 4.16
3432 6618 6.228258 TGTTCTGAGTCAATAAAGTACACCC 58.772 40.000 0.00 0.00 0.00 4.61
3433 6619 6.042781 TGTTCTGAGTCAATAAAGTACACCCT 59.957 38.462 0.00 0.00 0.00 4.34
3434 6620 6.681729 TCTGAGTCAATAAAGTACACCCTT 57.318 37.500 0.00 0.00 0.00 3.95
3435 6621 7.074653 TCTGAGTCAATAAAGTACACCCTTT 57.925 36.000 0.00 0.00 38.23 3.11
3436 6622 6.934645 TCTGAGTCAATAAAGTACACCCTTTG 59.065 38.462 0.00 0.00 36.18 2.77
3437 6623 6.597562 TGAGTCAATAAAGTACACCCTTTGT 58.402 36.000 0.00 0.00 42.84 2.83
3438 6624 6.708949 TGAGTCAATAAAGTACACCCTTTGTC 59.291 38.462 0.00 0.00 39.91 3.18
3439 6625 5.699458 AGTCAATAAAGTACACCCTTTGTCG 59.301 40.000 0.00 0.00 39.91 4.35
3440 6626 5.697633 GTCAATAAAGTACACCCTTTGTCGA 59.302 40.000 0.00 0.00 39.91 4.20
3441 6627 6.203338 GTCAATAAAGTACACCCTTTGTCGAA 59.797 38.462 0.00 0.00 39.91 3.71
3442 6628 6.425721 TCAATAAAGTACACCCTTTGTCGAAG 59.574 38.462 0.00 0.00 39.91 3.79
3444 6630 4.411256 AAGTACACCCTTTGTCGAAGAA 57.589 40.909 0.93 0.00 39.69 2.52
3445 6631 3.725490 AGTACACCCTTTGTCGAAGAAC 58.275 45.455 0.93 0.00 39.69 3.01
3446 6632 1.963172 ACACCCTTTGTCGAAGAACC 58.037 50.000 0.93 0.00 39.69 3.62
3447 6633 1.210967 ACACCCTTTGTCGAAGAACCA 59.789 47.619 0.93 0.00 39.69 3.67
3448 6634 2.158667 ACACCCTTTGTCGAAGAACCAT 60.159 45.455 0.93 0.00 39.69 3.55
3449 6635 2.884639 CACCCTTTGTCGAAGAACCATT 59.115 45.455 0.93 0.00 39.69 3.16
3450 6636 2.884639 ACCCTTTGTCGAAGAACCATTG 59.115 45.455 0.93 0.00 39.69 2.82
3452 6638 2.554032 CCTTTGTCGAAGAACCATTGCT 59.446 45.455 0.93 0.00 39.69 3.91
3453 6639 3.751175 CCTTTGTCGAAGAACCATTGCTA 59.249 43.478 0.93 0.00 39.69 3.49
3455 6641 3.678056 TGTCGAAGAACCATTGCTACT 57.322 42.857 0.00 0.00 39.69 2.57
3456 6642 3.325870 TGTCGAAGAACCATTGCTACTG 58.674 45.455 0.00 0.00 39.69 2.74
3458 6644 3.368236 GTCGAAGAACCATTGCTACTGAC 59.632 47.826 0.00 0.00 39.69 3.51
3459 6645 2.673368 CGAAGAACCATTGCTACTGACC 59.327 50.000 0.00 0.00 0.00 4.02
3460 6646 3.617531 CGAAGAACCATTGCTACTGACCT 60.618 47.826 0.00 0.00 0.00 3.85
3462 6648 2.639839 AGAACCATTGCTACTGACCTGT 59.360 45.455 0.00 0.00 0.00 4.00
3463 6649 2.479566 ACCATTGCTACTGACCTGTG 57.520 50.000 0.00 0.00 0.00 3.66
3464 6650 1.699634 ACCATTGCTACTGACCTGTGT 59.300 47.619 0.00 0.00 0.00 3.72
3465 6651 2.106511 ACCATTGCTACTGACCTGTGTT 59.893 45.455 0.00 0.00 0.00 3.32
3466 6652 3.149196 CCATTGCTACTGACCTGTGTTT 58.851 45.455 0.00 0.00 0.00 2.83
3468 6654 4.539870 CATTGCTACTGACCTGTGTTTTG 58.460 43.478 0.00 0.00 0.00 2.44
3470 6656 2.222027 GCTACTGACCTGTGTTTTGCT 58.778 47.619 0.00 0.00 0.00 3.91
3471 6657 3.181459 TGCTACTGACCTGTGTTTTGCTA 60.181 43.478 0.00 0.00 0.00 3.49
3472 6658 4.003648 GCTACTGACCTGTGTTTTGCTAT 58.996 43.478 0.00 0.00 0.00 2.97
3473 6659 4.093556 GCTACTGACCTGTGTTTTGCTATC 59.906 45.833 0.00 0.00 0.00 2.08
3474 6660 4.085357 ACTGACCTGTGTTTTGCTATCA 57.915 40.909 0.00 0.00 0.00 2.15
3475 6661 4.460263 ACTGACCTGTGTTTTGCTATCAA 58.540 39.130 0.00 0.00 0.00 2.57
3477 6663 5.536161 ACTGACCTGTGTTTTGCTATCAATT 59.464 36.000 0.00 0.00 31.33 2.32
3478 6664 6.714810 ACTGACCTGTGTTTTGCTATCAATTA 59.285 34.615 0.00 0.00 31.33 1.40
3479 6665 7.094634 ACTGACCTGTGTTTTGCTATCAATTAG 60.095 37.037 0.00 0.00 31.33 1.73
3480 6666 6.150976 TGACCTGTGTTTTGCTATCAATTAGG 59.849 38.462 0.00 0.00 31.33 2.69
3482 7275 6.493458 ACCTGTGTTTTGCTATCAATTAGGTT 59.507 34.615 0.00 0.00 31.33 3.50
3488 7281 3.961849 TGCTATCAATTAGGTTGCCACA 58.038 40.909 0.00 0.00 37.74 4.17
3499 7292 1.670811 GGTTGCCACATTCTCCGTATG 59.329 52.381 0.00 0.00 0.00 2.39
3500 7293 2.627945 GTTGCCACATTCTCCGTATGA 58.372 47.619 0.00 0.00 0.00 2.15
3501 7294 3.006940 GTTGCCACATTCTCCGTATGAA 58.993 45.455 0.00 0.00 0.00 2.57
3502 7295 3.558931 TGCCACATTCTCCGTATGAAT 57.441 42.857 0.00 0.00 34.82 2.57
3503 7296 3.466836 TGCCACATTCTCCGTATGAATC 58.533 45.455 0.00 0.00 32.47 2.52
3504 7297 3.118445 TGCCACATTCTCCGTATGAATCA 60.118 43.478 0.00 0.00 32.47 2.57
3507 7300 4.271049 CCACATTCTCCGTATGAATCACAC 59.729 45.833 0.00 0.00 32.47 3.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
80 99 0.826715 CCTTCTTGGAGATCTCGGCA 59.173 55.000 16.46 7.09 38.35 5.69
87 106 4.276642 GAATTCCTTGCCTTCTTGGAGAT 58.723 43.478 0.00 0.00 38.35 2.75
88 107 3.690460 GAATTCCTTGCCTTCTTGGAGA 58.310 45.455 0.00 0.00 38.35 3.71
96 115 0.036306 ACGGTCGAATTCCTTGCCTT 59.964 50.000 0.00 0.00 0.00 4.35
156 195 2.112815 GGTGGCCGGTAGTGATTGC 61.113 63.158 1.90 0.00 0.00 3.56
221 261 2.935238 GCTCGGTGAAATGCCTACAAGA 60.935 50.000 0.00 0.00 0.00 3.02
292 334 2.606587 CCCCCTACTGCCACTGCTT 61.607 63.158 0.00 0.00 38.71 3.91
313 355 2.689034 AGCTACTCTGGTGCCCCC 60.689 66.667 0.00 0.00 0.00 5.40
314 356 2.586792 CAGCTACTCTGGTGCCCC 59.413 66.667 0.00 0.00 39.15 5.80
319 361 1.599606 CCTCGTGCAGCTACTCTGGT 61.600 60.000 0.00 0.00 43.06 4.00
345 406 2.797177 AGAAGATGAGGAAGGCCAAC 57.203 50.000 5.01 0.00 36.29 3.77
355 416 1.923204 CGCCACGAAGAAGAAGATGAG 59.077 52.381 0.00 0.00 0.00 2.90
461 541 2.681064 CCCAATGGCCTGGTGGTG 60.681 66.667 15.91 6.60 34.33 4.17
462 542 3.996621 CCCCAATGGCCTGGTGGT 61.997 66.667 15.91 0.00 34.33 4.16
485 570 2.726351 CGTCCAAGCTCCTCCTCCC 61.726 68.421 0.00 0.00 0.00 4.30
527 618 6.533730 TGGCTCTCACTTGAAAATAGAAGAA 58.466 36.000 0.00 0.00 0.00 2.52
534 625 7.472334 ACATTAATGGCTCTCACTTGAAAAT 57.528 32.000 19.37 0.00 0.00 1.82
535 626 6.899393 ACATTAATGGCTCTCACTTGAAAA 57.101 33.333 19.37 0.00 0.00 2.29
536 627 6.899393 AACATTAATGGCTCTCACTTGAAA 57.101 33.333 19.37 0.00 0.00 2.69
537 628 6.899393 AAACATTAATGGCTCTCACTTGAA 57.101 33.333 19.37 0.00 0.00 2.69
538 629 7.828717 TCATAAACATTAATGGCTCTCACTTGA 59.171 33.333 19.37 7.01 0.00 3.02
539 630 7.912250 GTCATAAACATTAATGGCTCTCACTTG 59.088 37.037 19.37 5.09 0.00 3.16
540 631 7.067494 GGTCATAAACATTAATGGCTCTCACTT 59.933 37.037 19.37 0.00 0.00 3.16
541 632 6.543831 GGTCATAAACATTAATGGCTCTCACT 59.456 38.462 19.37 0.00 0.00 3.41
542 633 6.511767 CGGTCATAAACATTAATGGCTCTCAC 60.512 42.308 19.37 8.82 0.00 3.51
543 634 5.527214 CGGTCATAAACATTAATGGCTCTCA 59.473 40.000 19.37 0.00 0.00 3.27
544 635 5.758296 TCGGTCATAAACATTAATGGCTCTC 59.242 40.000 19.37 4.15 0.00 3.20
545 636 5.680619 TCGGTCATAAACATTAATGGCTCT 58.319 37.500 19.37 3.69 0.00 4.09
546 637 6.373779 CATCGGTCATAAACATTAATGGCTC 58.626 40.000 19.37 3.23 0.00 4.70
547 638 5.278463 GCATCGGTCATAAACATTAATGGCT 60.278 40.000 19.37 8.36 0.00 4.75
548 639 4.917415 GCATCGGTCATAAACATTAATGGC 59.083 41.667 19.37 4.80 0.00 4.40
549 640 6.317789 AGCATCGGTCATAAACATTAATGG 57.682 37.500 19.37 1.63 0.00 3.16
550 641 6.142798 GCAAGCATCGGTCATAAACATTAATG 59.857 38.462 14.01 14.01 0.00 1.90
551 642 6.183360 TGCAAGCATCGGTCATAAACATTAAT 60.183 34.615 0.00 0.00 0.00 1.40
552 643 5.124617 TGCAAGCATCGGTCATAAACATTAA 59.875 36.000 0.00 0.00 0.00 1.40
553 644 4.637977 TGCAAGCATCGGTCATAAACATTA 59.362 37.500 0.00 0.00 0.00 1.90
554 645 3.443329 TGCAAGCATCGGTCATAAACATT 59.557 39.130 0.00 0.00 0.00 2.71
555 646 3.016031 TGCAAGCATCGGTCATAAACAT 58.984 40.909 0.00 0.00 0.00 2.71
556 647 2.419673 CTGCAAGCATCGGTCATAAACA 59.580 45.455 0.00 0.00 0.00 2.83
557 648 3.056952 CTGCAAGCATCGGTCATAAAC 57.943 47.619 0.00 0.00 0.00 2.01
571 662 2.414559 CGGTTTATCACTTGGCTGCAAG 60.415 50.000 0.50 6.16 38.11 4.01
572 663 1.539388 CGGTTTATCACTTGGCTGCAA 59.461 47.619 0.50 0.00 0.00 4.08
573 664 1.164411 CGGTTTATCACTTGGCTGCA 58.836 50.000 0.50 0.00 0.00 4.41
574 665 0.179163 GCGGTTTATCACTTGGCTGC 60.179 55.000 0.00 0.00 0.00 5.25
575 666 1.135689 GTGCGGTTTATCACTTGGCTG 60.136 52.381 0.00 0.00 0.00 4.85
576 667 1.165270 GTGCGGTTTATCACTTGGCT 58.835 50.000 0.00 0.00 0.00 4.75
577 668 0.170339 GGTGCGGTTTATCACTTGGC 59.830 55.000 0.00 0.00 33.91 4.52
578 669 0.808755 GGGTGCGGTTTATCACTTGG 59.191 55.000 0.00 0.00 33.91 3.61
579 670 0.808755 GGGGTGCGGTTTATCACTTG 59.191 55.000 0.00 0.00 33.91 3.16
580 671 0.696501 AGGGGTGCGGTTTATCACTT 59.303 50.000 0.00 0.00 33.91 3.16
581 672 0.035439 CAGGGGTGCGGTTTATCACT 60.035 55.000 0.00 0.00 33.91 3.41
582 673 0.322187 ACAGGGGTGCGGTTTATCAC 60.322 55.000 0.00 0.00 0.00 3.06
583 674 0.035820 GACAGGGGTGCGGTTTATCA 60.036 55.000 0.00 0.00 0.00 2.15
584 675 0.035820 TGACAGGGGTGCGGTTTATC 60.036 55.000 0.00 0.00 0.00 1.75
585 676 0.402504 TTGACAGGGGTGCGGTTTAT 59.597 50.000 0.00 0.00 0.00 1.40
586 677 0.183014 TTTGACAGGGGTGCGGTTTA 59.817 50.000 0.00 0.00 0.00 2.01
587 678 0.684805 TTTTGACAGGGGTGCGGTTT 60.685 50.000 0.00 0.00 0.00 3.27
588 679 1.076632 TTTTGACAGGGGTGCGGTT 60.077 52.632 0.00 0.00 0.00 4.44
589 680 1.528309 CTTTTGACAGGGGTGCGGT 60.528 57.895 0.00 0.00 0.00 5.68
590 681 2.268076 CCTTTTGACAGGGGTGCGG 61.268 63.158 0.00 0.00 0.00 5.69
591 682 2.919494 GCCTTTTGACAGGGGTGCG 61.919 63.158 0.00 0.00 34.01 5.34
592 683 0.251165 TAGCCTTTTGACAGGGGTGC 60.251 55.000 0.00 0.00 34.01 5.01
593 684 1.351017 TCTAGCCTTTTGACAGGGGTG 59.649 52.381 0.00 0.00 34.01 4.61
594 685 1.742308 TCTAGCCTTTTGACAGGGGT 58.258 50.000 0.00 0.00 34.01 4.95
595 686 2.879103 TTCTAGCCTTTTGACAGGGG 57.121 50.000 0.00 0.00 34.01 4.79
596 687 4.397417 CAGAATTCTAGCCTTTTGACAGGG 59.603 45.833 7.86 0.00 34.01 4.45
597 688 4.397417 CCAGAATTCTAGCCTTTTGACAGG 59.603 45.833 7.86 0.00 36.95 4.00
598 689 5.248640 TCCAGAATTCTAGCCTTTTGACAG 58.751 41.667 7.86 0.00 0.00 3.51
599 690 5.241403 TCCAGAATTCTAGCCTTTTGACA 57.759 39.130 7.86 0.00 0.00 3.58
600 691 5.940470 TCTTCCAGAATTCTAGCCTTTTGAC 59.060 40.000 7.86 0.00 0.00 3.18
601 692 6.126863 TCTTCCAGAATTCTAGCCTTTTGA 57.873 37.500 7.86 0.00 0.00 2.69
602 693 7.338957 AGAATCTTCCAGAATTCTAGCCTTTTG 59.661 37.037 7.86 0.00 32.22 2.44
603 694 7.409358 AGAATCTTCCAGAATTCTAGCCTTTT 58.591 34.615 7.86 0.00 32.22 2.27
604 695 6.967897 AGAATCTTCCAGAATTCTAGCCTTT 58.032 36.000 7.86 0.00 32.22 3.11
605 696 6.573712 AGAATCTTCCAGAATTCTAGCCTT 57.426 37.500 7.86 0.14 32.22 4.35
606 697 6.386635 AGAAGAATCTTCCAGAATTCTAGCCT 59.613 38.462 18.46 0.00 33.49 4.58
607 698 6.591001 AGAAGAATCTTCCAGAATTCTAGCC 58.409 40.000 18.46 0.00 33.49 3.93
608 699 9.777297 ATTAGAAGAATCTTCCAGAATTCTAGC 57.223 33.333 18.46 0.00 37.10 3.42
676 767 9.710979 CGAAACAACATTTACAACTAAGAAGAA 57.289 29.630 0.00 0.00 0.00 2.52
677 768 8.339714 CCGAAACAACATTTACAACTAAGAAGA 58.660 33.333 0.00 0.00 0.00 2.87
678 769 8.339714 TCCGAAACAACATTTACAACTAAGAAG 58.660 33.333 0.00 0.00 0.00 2.85
679 770 8.211116 TCCGAAACAACATTTACAACTAAGAA 57.789 30.769 0.00 0.00 0.00 2.52
680 771 7.789273 TCCGAAACAACATTTACAACTAAGA 57.211 32.000 0.00 0.00 0.00 2.10
681 772 8.126700 AGTTCCGAAACAACATTTACAACTAAG 58.873 33.333 0.00 0.00 37.88 2.18
682 773 7.987649 AGTTCCGAAACAACATTTACAACTAA 58.012 30.769 0.00 0.00 37.88 2.24
683 774 7.556733 AGTTCCGAAACAACATTTACAACTA 57.443 32.000 0.00 0.00 37.88 2.24
684 775 6.445357 AGTTCCGAAACAACATTTACAACT 57.555 33.333 0.00 0.00 37.88 3.16
685 776 7.514573 AAAGTTCCGAAACAACATTTACAAC 57.485 32.000 0.00 0.00 37.88 3.32
686 777 8.460428 AGTAAAGTTCCGAAACAACATTTACAA 58.540 29.630 8.92 0.00 37.88 2.41
687 778 7.987649 AGTAAAGTTCCGAAACAACATTTACA 58.012 30.769 8.92 0.00 37.88 2.41
688 779 8.124199 TGAGTAAAGTTCCGAAACAACATTTAC 58.876 33.333 0.72 0.72 37.88 2.01
689 780 8.211116 TGAGTAAAGTTCCGAAACAACATTTA 57.789 30.769 0.00 0.00 37.88 1.40
690 781 7.090953 TGAGTAAAGTTCCGAAACAACATTT 57.909 32.000 0.00 0.00 37.88 2.32
691 782 6.687081 TGAGTAAAGTTCCGAAACAACATT 57.313 33.333 0.00 0.00 37.88 2.71
692 783 6.687081 TTGAGTAAAGTTCCGAAACAACAT 57.313 33.333 0.00 0.00 37.88 2.71
693 784 6.094325 ACATTGAGTAAAGTTCCGAAACAACA 59.906 34.615 0.00 0.00 37.88 3.33
694 785 6.492254 ACATTGAGTAAAGTTCCGAAACAAC 58.508 36.000 0.00 0.00 37.88 3.32
695 786 6.687081 ACATTGAGTAAAGTTCCGAAACAA 57.313 33.333 0.00 0.00 37.88 2.83
696 787 6.687081 AACATTGAGTAAAGTTCCGAAACA 57.313 33.333 0.00 0.00 37.88 2.83
697 788 6.416750 CCAAACATTGAGTAAAGTTCCGAAAC 59.583 38.462 0.00 0.00 35.50 2.78
698 789 6.500041 CCAAACATTGAGTAAAGTTCCGAAA 58.500 36.000 0.00 0.00 0.00 3.46
699 790 5.506649 GCCAAACATTGAGTAAAGTTCCGAA 60.507 40.000 0.00 0.00 0.00 4.30
700 791 4.023536 GCCAAACATTGAGTAAAGTTCCGA 60.024 41.667 0.00 0.00 0.00 4.55
701 792 4.226761 GCCAAACATTGAGTAAAGTTCCG 58.773 43.478 0.00 0.00 0.00 4.30
702 793 5.195001 TGCCAAACATTGAGTAAAGTTCC 57.805 39.130 0.00 0.00 0.00 3.62
703 794 6.273071 AGTTGCCAAACATTGAGTAAAGTTC 58.727 36.000 0.00 0.00 38.88 3.01
704 795 6.127479 TGAGTTGCCAAACATTGAGTAAAGTT 60.127 34.615 0.00 0.00 38.88 2.66
705 796 5.359576 TGAGTTGCCAAACATTGAGTAAAGT 59.640 36.000 0.00 0.00 38.88 2.66
706 797 5.830912 TGAGTTGCCAAACATTGAGTAAAG 58.169 37.500 0.00 0.00 38.88 1.85
707 798 5.843673 TGAGTTGCCAAACATTGAGTAAA 57.156 34.783 0.00 0.00 38.88 2.01
708 799 5.843673 TTGAGTTGCCAAACATTGAGTAA 57.156 34.783 0.00 0.00 38.88 2.24
709 800 5.843673 TTTGAGTTGCCAAACATTGAGTA 57.156 34.783 0.00 0.00 38.88 2.59
710 801 4.734398 TTTGAGTTGCCAAACATTGAGT 57.266 36.364 0.00 0.00 38.88 3.41
711 802 5.049954 CCATTTTGAGTTGCCAAACATTGAG 60.050 40.000 0.00 0.00 38.88 3.02
712 803 4.815308 CCATTTTGAGTTGCCAAACATTGA 59.185 37.500 0.00 0.00 38.88 2.57
713 804 4.815308 TCCATTTTGAGTTGCCAAACATTG 59.185 37.500 0.00 0.00 38.88 2.82
714 805 5.033589 TCCATTTTGAGTTGCCAAACATT 57.966 34.783 0.00 0.00 38.88 2.71
715 806 4.686191 TCCATTTTGAGTTGCCAAACAT 57.314 36.364 0.00 0.00 38.88 2.71
716 807 4.081198 AGTTCCATTTTGAGTTGCCAAACA 60.081 37.500 0.00 0.00 38.88 2.83
717 808 4.441792 AGTTCCATTTTGAGTTGCCAAAC 58.558 39.130 0.00 0.00 35.95 2.93
718 809 4.751767 AGTTCCATTTTGAGTTGCCAAA 57.248 36.364 0.00 0.00 34.56 3.28
719 810 4.692228 GAAGTTCCATTTTGAGTTGCCAA 58.308 39.130 0.00 0.00 0.00 4.52
720 811 3.243367 CGAAGTTCCATTTTGAGTTGCCA 60.243 43.478 0.00 0.00 0.00 4.92
721 812 3.243401 ACGAAGTTCCATTTTGAGTTGCC 60.243 43.478 0.00 0.00 37.78 4.52
722 813 3.964909 ACGAAGTTCCATTTTGAGTTGC 58.035 40.909 0.00 0.00 37.78 4.17
723 814 8.029642 AGTATACGAAGTTCCATTTTGAGTTG 57.970 34.615 0.00 0.00 37.78 3.16
724 815 8.617290 AAGTATACGAAGTTCCATTTTGAGTT 57.383 30.769 0.00 0.00 37.78 3.01
725 816 8.617290 AAAGTATACGAAGTTCCATTTTGAGT 57.383 30.769 0.00 0.00 37.78 3.41
726 817 9.893305 AAAAAGTATACGAAGTTCCATTTTGAG 57.107 29.630 0.00 0.00 37.78 3.02
750 841 9.796062 CGTATTTCTTTGCGTAGTAAGTAAAAA 57.204 29.630 1.59 0.00 31.13 1.94
751 842 8.977505 ACGTATTTCTTTGCGTAGTAAGTAAAA 58.022 29.630 0.00 0.00 35.71 1.52
752 843 8.427012 CACGTATTTCTTTGCGTAGTAAGTAAA 58.573 33.333 0.00 0.13 35.71 2.01
753 844 7.594758 ACACGTATTTCTTTGCGTAGTAAGTAA 59.405 33.333 0.00 0.00 35.71 2.24
754 845 7.083858 ACACGTATTTCTTTGCGTAGTAAGTA 58.916 34.615 0.00 0.00 35.71 2.24
755 846 5.922544 ACACGTATTTCTTTGCGTAGTAAGT 59.077 36.000 0.00 0.00 35.71 2.24
756 847 6.385537 ACACGTATTTCTTTGCGTAGTAAG 57.614 37.500 0.00 0.00 35.71 2.34
757 848 7.594758 AGTTACACGTATTTCTTTGCGTAGTAA 59.405 33.333 0.00 0.00 35.71 2.24
758 849 7.083858 AGTTACACGTATTTCTTTGCGTAGTA 58.916 34.615 0.00 0.00 35.71 1.82
759 850 5.922544 AGTTACACGTATTTCTTTGCGTAGT 59.077 36.000 0.00 0.00 35.71 2.73
760 851 6.307318 AGAGTTACACGTATTTCTTTGCGTAG 59.693 38.462 0.00 0.00 35.71 3.51
761 852 6.151691 AGAGTTACACGTATTTCTTTGCGTA 58.848 36.000 0.00 0.00 35.71 4.42
762 853 4.986659 AGAGTTACACGTATTTCTTTGCGT 59.013 37.500 0.00 0.00 38.14 5.24
763 854 5.511088 AGAGTTACACGTATTTCTTTGCG 57.489 39.130 0.00 0.00 0.00 4.85
764 855 8.015409 ACTAAGAGTTACACGTATTTCTTTGC 57.985 34.615 0.00 0.00 0.00 3.68
803 894 1.725641 ATACGTACGTGTCCTCGACA 58.274 50.000 30.25 7.71 40.50 4.35
804 895 2.860735 ACTATACGTACGTGTCCTCGAC 59.139 50.000 30.25 0.00 34.70 4.20
805 896 2.860136 CACTATACGTACGTGTCCTCGA 59.140 50.000 30.25 9.30 34.70 4.04
806 897 2.604914 ACACTATACGTACGTGTCCTCG 59.395 50.000 30.25 15.87 37.30 4.63
807 898 4.606457 AACACTATACGTACGTGTCCTC 57.394 45.455 30.25 0.00 40.68 3.71
808 899 6.494893 TTAAACACTATACGTACGTGTCCT 57.505 37.500 30.25 18.64 40.68 3.85
809 900 7.561237 TTTTAAACACTATACGTACGTGTCC 57.439 36.000 30.25 0.00 40.68 4.02
831 922 3.169355 ACGTACGTGTCCACTCTTTTT 57.831 42.857 22.14 0.00 0.00 1.94
832 923 2.877043 ACGTACGTGTCCACTCTTTT 57.123 45.000 22.14 0.00 0.00 2.27
833 924 5.355071 TGATATACGTACGTGTCCACTCTTT 59.645 40.000 30.25 1.29 0.00 2.52
834 925 4.877823 TGATATACGTACGTGTCCACTCTT 59.122 41.667 30.25 1.85 0.00 2.85
835 926 4.445453 TGATATACGTACGTGTCCACTCT 58.555 43.478 30.25 2.64 0.00 3.24
836 927 4.319333 CCTGATATACGTACGTGTCCACTC 60.319 50.000 30.25 17.43 0.00 3.51
837 928 3.562973 CCTGATATACGTACGTGTCCACT 59.437 47.826 30.25 9.80 0.00 4.00
838 929 3.313526 ACCTGATATACGTACGTGTCCAC 59.686 47.826 30.25 17.42 0.00 4.02
839 930 3.313249 CACCTGATATACGTACGTGTCCA 59.687 47.826 30.25 21.50 0.00 4.02
840 931 3.561310 TCACCTGATATACGTACGTGTCC 59.439 47.826 30.25 18.40 0.00 4.02
841 932 4.801147 TCACCTGATATACGTACGTGTC 57.199 45.455 30.25 22.89 0.00 3.67
842 933 4.577693 ACATCACCTGATATACGTACGTGT 59.422 41.667 30.25 25.72 32.63 4.49
843 934 5.104562 ACATCACCTGATATACGTACGTG 57.895 43.478 30.25 14.15 32.63 4.49
844 935 5.762825 AACATCACCTGATATACGTACGT 57.237 39.130 25.98 25.98 32.63 3.57
845 936 7.149240 CGTAAAACATCACCTGATATACGTACG 60.149 40.741 15.01 15.01 33.04 3.67
846 937 7.113965 CCGTAAAACATCACCTGATATACGTAC 59.886 40.741 0.00 0.00 34.26 3.67
847 938 7.140705 CCGTAAAACATCACCTGATATACGTA 58.859 38.462 0.00 0.00 34.26 3.57
848 939 5.981315 CCGTAAAACATCACCTGATATACGT 59.019 40.000 0.00 0.00 34.26 3.57
849 940 5.107607 GCCGTAAAACATCACCTGATATACG 60.108 44.000 11.39 11.39 34.96 3.06
850 941 5.107607 CGCCGTAAAACATCACCTGATATAC 60.108 44.000 0.00 0.00 32.63 1.47
851 942 4.986034 CGCCGTAAAACATCACCTGATATA 59.014 41.667 0.00 0.00 32.63 0.86
852 943 3.807622 CGCCGTAAAACATCACCTGATAT 59.192 43.478 0.00 0.00 32.63 1.63
853 944 3.191669 CGCCGTAAAACATCACCTGATA 58.808 45.455 0.00 0.00 32.63 2.15
854 945 2.006888 CGCCGTAAAACATCACCTGAT 58.993 47.619 0.00 0.00 34.56 2.90
855 946 1.434555 CGCCGTAAAACATCACCTGA 58.565 50.000 0.00 0.00 0.00 3.86
856 947 0.446222 CCGCCGTAAAACATCACCTG 59.554 55.000 0.00 0.00 0.00 4.00
857 948 0.675522 CCCGCCGTAAAACATCACCT 60.676 55.000 0.00 0.00 0.00 4.00
858 949 1.798087 CCCGCCGTAAAACATCACC 59.202 57.895 0.00 0.00 0.00 4.02
859 950 1.135939 GCCCGCCGTAAAACATCAC 59.864 57.895 0.00 0.00 0.00 3.06
860 951 2.041686 GGCCCGCCGTAAAACATCA 61.042 57.895 0.00 0.00 0.00 3.07
861 952 1.310216 AAGGCCCGCCGTAAAACATC 61.310 55.000 0.00 0.00 41.95 3.06
862 953 1.303806 AAGGCCCGCCGTAAAACAT 60.304 52.632 0.00 0.00 41.95 2.71
863 954 2.113562 AAGGCCCGCCGTAAAACA 59.886 55.556 0.00 0.00 41.95 2.83
864 955 1.798234 AACAAGGCCCGCCGTAAAAC 61.798 55.000 0.00 0.00 41.95 2.43
865 956 1.528776 AACAAGGCCCGCCGTAAAA 60.529 52.632 0.00 0.00 41.95 1.52
866 957 2.113562 AACAAGGCCCGCCGTAAA 59.886 55.556 0.00 0.00 41.95 2.01
867 958 2.670251 CAACAAGGCCCGCCGTAA 60.670 61.111 0.00 0.00 41.95 3.18
868 959 3.943691 ACAACAAGGCCCGCCGTA 61.944 61.111 0.00 0.00 41.95 4.02
871 962 3.207547 GAACACAACAAGGCCCGCC 62.208 63.158 0.00 0.00 0.00 6.13
872 963 2.335011 GAACACAACAAGGCCCGC 59.665 61.111 0.00 0.00 0.00 6.13
873 964 2.184167 ACGAACACAACAAGGCCCG 61.184 57.895 0.00 0.00 0.00 6.13
874 965 1.358759 CACGAACACAACAAGGCCC 59.641 57.895 0.00 0.00 0.00 5.80
875 966 0.028902 GACACGAACACAACAAGGCC 59.971 55.000 0.00 0.00 0.00 5.19
886 977 3.056035 AGGAAACCTAGATGGACACGAAC 60.056 47.826 0.00 0.00 39.71 3.95
896 987 5.897824 TCCAATCGTAGAAGGAAACCTAGAT 59.102 40.000 0.00 0.00 43.58 1.98
910 1001 2.434336 TGACCAGGGATTCCAATCGTAG 59.566 50.000 4.80 0.00 36.27 3.51
912 1003 1.285280 TGACCAGGGATTCCAATCGT 58.715 50.000 4.80 0.00 36.27 3.73
917 1014 1.002069 AGCATTGACCAGGGATTCCA 58.998 50.000 4.80 0.00 34.83 3.53
921 1018 6.126652 GGTATATATCAGCATTGACCAGGGAT 60.127 42.308 0.00 0.00 35.83 3.85
948 1056 2.225348 CGAACACATCGTGCACACT 58.775 52.632 18.64 0.00 46.52 3.55
958 1068 1.671054 CGTTGGGAGGCGAACACAT 60.671 57.895 0.00 0.00 0.00 3.21
964 1079 2.358247 GCTTTCGTTGGGAGGCGA 60.358 61.111 0.00 0.00 35.17 5.54
969 1084 0.038067 TTCGATCGCTTTCGTTGGGA 60.038 50.000 11.09 0.00 40.03 4.37
975 1090 2.152112 GCTCTATGTTCGATCGCTTTCG 59.848 50.000 11.09 0.00 40.46 3.46
977 1092 2.159099 TGGCTCTATGTTCGATCGCTTT 60.159 45.455 11.09 0.00 0.00 3.51
987 1102 2.104451 CTGCTCCATCTGGCTCTATGTT 59.896 50.000 0.00 0.00 34.44 2.71
1095 1227 2.355126 CAGACGCAGCGTGACACT 60.355 61.111 28.57 13.59 41.37 3.55
1140 1272 0.888619 CTGTACGCAGGAGGTTCTCA 59.111 55.000 0.00 0.00 39.01 3.27
1145 1277 1.394618 GAGATCTGTACGCAGGAGGT 58.605 55.000 0.00 0.00 42.78 3.85
1168 1300 2.093447 AGGTGATGAAGAACCCGCTAAG 60.093 50.000 0.00 0.00 37.13 2.18
1193 1325 2.177594 CTCGGGCAAACAGAGCTCCT 62.178 60.000 10.93 0.00 34.68 3.69
1392 1554 1.821332 GGGCAGAGATTTCCAGCGG 60.821 63.158 0.00 0.00 0.00 5.52
1401 1563 1.145598 CGTGCATGAGGGCAGAGAT 59.854 57.895 0.00 0.00 45.96 2.75
1402 1564 2.580815 CGTGCATGAGGGCAGAGA 59.419 61.111 0.00 0.00 45.96 3.10
1417 1579 0.525668 GCTGTAGTATGACTGCGCGT 60.526 55.000 8.43 3.28 33.27 6.01
1421 1583 0.249489 CCCGGCTGTAGTATGACTGC 60.249 60.000 0.00 0.00 41.95 4.40
1424 1586 0.757935 TCCCCCGGCTGTAGTATGAC 60.758 60.000 0.00 0.00 0.00 3.06
1436 1598 3.861797 CACGGAGGATTCCCCCGG 61.862 72.222 26.94 13.73 44.99 5.73
1447 1609 2.953466 TCGGAGAAAATACCACGGAG 57.047 50.000 0.00 0.00 0.00 4.63
1461 1623 3.766591 AGGCCAGATAGTAATGATCGGAG 59.233 47.826 5.01 0.00 0.00 4.63
1463 1625 4.543590 AAGGCCAGATAGTAATGATCGG 57.456 45.455 5.01 0.00 0.00 4.18
1465 1627 6.597280 GGATCAAAGGCCAGATAGTAATGATC 59.403 42.308 5.01 9.77 39.73 2.92
1468 1630 5.006386 GGGATCAAAGGCCAGATAGTAATG 58.994 45.833 5.01 0.00 0.00 1.90
1473 1635 2.808202 CGTGGGATCAAAGGCCAGATAG 60.808 54.545 5.01 0.00 0.00 2.08
1524 1686 1.309499 CCGCCCAACGCAAATAAGGA 61.309 55.000 0.00 0.00 41.76 3.36
1541 1715 1.003718 GGGTCAAACTCACCTCCCG 60.004 63.158 0.00 0.00 33.96 5.14
1542 1716 0.771755 AAGGGTCAAACTCACCTCCC 59.228 55.000 0.00 0.00 33.96 4.30
1543 1717 2.658807 AAAGGGTCAAACTCACCTCC 57.341 50.000 0.00 0.00 33.96 4.30
1544 1718 4.563786 CCTCTAAAGGGTCAAACTCACCTC 60.564 50.000 0.00 0.00 39.21 3.85
1547 1727 4.563786 CCTCCTCTAAAGGGTCAAACTCAC 60.564 50.000 0.00 0.00 43.56 3.51
1604 1796 5.237779 CGTCCTCTCCTAGAAGAGAATACAC 59.762 48.000 7.71 0.00 44.67 2.90
1617 1809 0.033405 CCTCCCAACGTCCTCTCCTA 60.033 60.000 0.00 0.00 0.00 2.94
1626 1818 0.763223 ACAACCTCTCCTCCCAACGT 60.763 55.000 0.00 0.00 0.00 3.99
1653 1845 4.113815 CCTGCGGCATCCCCTTCA 62.114 66.667 1.75 0.00 0.00 3.02
1696 1888 2.905807 CGGAGCGGAGTCGGATACC 61.906 68.421 1.18 0.00 36.79 2.73
1697 1889 2.115533 GACGGAGCGGAGTCGGATAC 62.116 65.000 1.18 0.00 36.79 2.24
1699 1891 2.321263 TAGACGGAGCGGAGTCGGAT 62.321 60.000 1.18 0.00 41.86 4.18
1700 1892 2.321263 ATAGACGGAGCGGAGTCGGA 62.321 60.000 1.18 0.00 41.86 4.55
1794 1996 6.978080 GGCAAAACTGAACACTAAAATCAAGA 59.022 34.615 0.00 0.00 0.00 3.02
1795 2001 6.200854 GGGCAAAACTGAACACTAAAATCAAG 59.799 38.462 0.00 0.00 0.00 3.02
1828 2037 4.202357 TGAGATACAGGTGTGGATAATGCC 60.202 45.833 0.00 0.00 0.00 4.40
1840 2051 6.267471 TGGCAAGAAATTTTTGAGATACAGGT 59.733 34.615 13.72 0.00 0.00 4.00
1841 2052 6.690530 TGGCAAGAAATTTTTGAGATACAGG 58.309 36.000 13.72 0.00 0.00 4.00
1845 2056 9.590451 GATCATTGGCAAGAAATTTTTGAGATA 57.410 29.630 5.96 1.60 0.00 1.98
1848 2059 7.601130 TCAGATCATTGGCAAGAAATTTTTGAG 59.399 33.333 5.96 0.00 0.00 3.02
1871 2085 8.456471 TCAGACAAAGATATTCTGCAAAATCAG 58.544 33.333 0.00 0.00 37.31 2.90
2009 2227 7.592439 ATCGCATGATTCATTCAGTATACAG 57.408 36.000 5.50 0.00 37.89 2.74
2034 2252 5.812642 CGTGCTTTAATATCCACTCTGACTT 59.187 40.000 0.00 0.00 0.00 3.01
2071 2289 5.538053 TGATCAAACACTTCCATTGGCTTAA 59.462 36.000 0.00 0.00 0.00 1.85
2072 2290 5.076182 TGATCAAACACTTCCATTGGCTTA 58.924 37.500 0.00 0.00 0.00 3.09
2073 2291 3.896888 TGATCAAACACTTCCATTGGCTT 59.103 39.130 0.00 0.00 0.00 4.35
2078 2296 6.906157 ACTTGATGATCAAACACTTCCATT 57.094 33.333 9.39 0.00 35.73 3.16
2095 2313 4.167502 AGATCCATGGTCCATGAACTTGAT 59.832 41.667 30.14 22.40 43.81 2.57
2156 2377 5.316987 ACTTCTTCCTTGTTGATACTTGGG 58.683 41.667 0.00 0.00 0.00 4.12
2213 2437 6.753744 TGTCTACATTCTCACAGAAATCATCG 59.246 38.462 0.00 0.00 37.82 3.84
2223 2447 5.482163 TCAACCATGTCTACATTCTCACA 57.518 39.130 0.00 0.00 33.61 3.58
2224 2448 5.934625 ACTTCAACCATGTCTACATTCTCAC 59.065 40.000 0.00 0.00 33.61 3.51
2418 2642 3.561725 GGAAGGCCAGAGTCGAAATATTG 59.438 47.826 5.01 0.00 0.00 1.90
2448 2672 9.067986 GTATGGAAAAGATTTAATCTCCCGATT 57.932 33.333 8.00 0.00 42.34 3.34
2460 2684 4.462483 ACATGGCGTGTATGGAAAAGATTT 59.538 37.500 11.37 0.00 39.91 2.17
2610 2853 8.288208 GGTTGAATTGATCAGTAGCAATGATAG 58.712 37.037 8.84 0.00 40.75 2.08
2614 2857 5.268544 CGGTTGAATTGATCAGTAGCAATG 58.731 41.667 8.84 3.63 40.75 2.82
2618 2861 2.614057 CCCGGTTGAATTGATCAGTAGC 59.386 50.000 0.00 0.00 39.77 3.58
2621 2864 1.463674 GCCCGGTTGAATTGATCAGT 58.536 50.000 0.00 0.00 39.77 3.41
2622 2865 0.378257 CGCCCGGTTGAATTGATCAG 59.622 55.000 0.00 0.00 39.77 2.90
2623 2866 1.029408 CCGCCCGGTTGAATTGATCA 61.029 55.000 0.00 0.00 35.85 2.92
2624 2867 1.727467 CCGCCCGGTTGAATTGATC 59.273 57.895 0.00 0.00 0.00 2.92
2627 2870 2.709883 ATGCCGCCCGGTTGAATTG 61.710 57.895 8.66 0.00 37.65 2.32
2628 2871 2.362375 ATGCCGCCCGGTTGAATT 60.362 55.556 8.66 0.00 37.65 2.17
2629 2872 3.140141 CATGCCGCCCGGTTGAAT 61.140 61.111 8.66 0.00 37.65 2.57
2630 2873 4.337177 TCATGCCGCCCGGTTGAA 62.337 61.111 8.66 0.00 37.65 2.69
2637 2880 3.721370 ATCTTGGGTCATGCCGCCC 62.721 63.158 11.43 11.43 45.04 6.13
2639 2882 2.484062 CCATCTTGGGTCATGCCGC 61.484 63.158 0.00 0.00 38.44 6.53
2640 2883 0.179009 ATCCATCTTGGGTCATGCCG 60.179 55.000 0.00 0.00 38.32 5.69
2663 2906 4.662468 TGCTAGCCACAAACATGAAAAA 57.338 36.364 13.29 0.00 0.00 1.94
2665 2908 3.382865 TGTTGCTAGCCACAAACATGAAA 59.617 39.130 18.59 0.00 0.00 2.69
2666 2909 2.954989 TGTTGCTAGCCACAAACATGAA 59.045 40.909 18.59 0.00 0.00 2.57
2667 2910 2.580962 TGTTGCTAGCCACAAACATGA 58.419 42.857 18.59 0.00 0.00 3.07
2668 2911 3.192001 AGATGTTGCTAGCCACAAACATG 59.808 43.478 26.76 0.00 0.00 3.21
2669 2912 3.424703 AGATGTTGCTAGCCACAAACAT 58.575 40.909 23.78 23.72 0.00 2.71
2670 2913 2.813754 GAGATGTTGCTAGCCACAAACA 59.186 45.455 23.78 20.45 0.00 2.83
2671 2914 2.162408 GGAGATGTTGCTAGCCACAAAC 59.838 50.000 23.78 19.38 0.00 2.93
2672 2915 2.436417 GGAGATGTTGCTAGCCACAAA 58.564 47.619 23.78 3.34 0.00 2.83
2674 2917 0.253044 GGGAGATGTTGCTAGCCACA 59.747 55.000 22.45 22.45 0.00 4.17
2676 2919 0.991146 TTGGGAGATGTTGCTAGCCA 59.009 50.000 13.29 3.93 0.00 4.75
2677 2920 2.355010 ATTGGGAGATGTTGCTAGCC 57.645 50.000 13.29 0.00 0.00 3.93
2684 3041 4.957954 ACATGCATGTAATTGGGAGATGTT 59.042 37.500 30.50 0.00 39.68 2.71
2691 3048 1.134753 ACGCACATGCATGTAATTGGG 59.865 47.619 30.92 25.96 39.39 4.12
2693 3050 1.584761 GCACGCACATGCATGTAATTG 59.415 47.619 30.92 25.10 45.39 2.32
2695 3052 3.628005 GCACGCACATGCATGTAAT 57.372 47.368 30.92 16.69 45.39 1.89
2705 3063 4.641645 CCCTCCCAAGCACGCACA 62.642 66.667 0.00 0.00 0.00 4.57
2727 3085 1.153289 CAATGAGGACCGGCTGGAG 60.153 63.158 21.41 0.00 39.21 3.86
2728 3086 0.616395 TACAATGAGGACCGGCTGGA 60.616 55.000 21.41 0.00 39.21 3.86
2730 3088 0.537188 ACTACAATGAGGACCGGCTG 59.463 55.000 0.00 0.00 0.00 4.85
2731 3089 0.537188 CACTACAATGAGGACCGGCT 59.463 55.000 0.00 0.00 0.00 5.52
2732 3090 0.249398 ACACTACAATGAGGACCGGC 59.751 55.000 0.00 0.00 0.00 6.13
2733 3091 1.825474 AGACACTACAATGAGGACCGG 59.175 52.381 0.00 0.00 0.00 5.28
2735 3093 3.673594 CGACAGACACTACAATGAGGACC 60.674 52.174 0.00 0.00 0.00 4.46
2736 3094 3.190744 TCGACAGACACTACAATGAGGAC 59.809 47.826 0.00 0.00 0.00 3.85
2737 3095 3.190744 GTCGACAGACACTACAATGAGGA 59.809 47.826 11.55 0.00 46.32 3.71
2738 3096 3.502920 GTCGACAGACACTACAATGAGG 58.497 50.000 11.55 0.00 46.32 3.86
2750 3108 1.514443 GTGCTAGGCGTCGACAGAC 60.514 63.158 17.16 10.70 43.72 3.51
2751 3109 1.520600 TTGTGCTAGGCGTCGACAGA 61.521 55.000 17.16 0.00 0.00 3.41
2752 3110 1.073216 CTTGTGCTAGGCGTCGACAG 61.073 60.000 17.16 9.59 0.00 3.51
2754 3112 1.805945 CCTTGTGCTAGGCGTCGAC 60.806 63.158 5.18 5.18 0.00 4.20
2755 3113 2.571757 CCTTGTGCTAGGCGTCGA 59.428 61.111 0.00 0.00 0.00 4.20
2761 3119 0.035317 TGTCAGTGCCTTGTGCTAGG 59.965 55.000 0.00 0.00 42.00 3.02
2762 3120 1.436600 CTGTCAGTGCCTTGTGCTAG 58.563 55.000 0.00 0.00 42.00 3.42
2763 3121 0.035317 CCTGTCAGTGCCTTGTGCTA 59.965 55.000 0.00 0.00 42.00 3.49
2764 3122 1.228063 CCTGTCAGTGCCTTGTGCT 60.228 57.895 0.00 0.00 42.00 4.40
2765 3123 0.607489 ATCCTGTCAGTGCCTTGTGC 60.607 55.000 0.00 0.00 41.77 4.57
2769 3127 1.267121 ACGTATCCTGTCAGTGCCTT 58.733 50.000 0.00 0.00 0.00 4.35
2770 3128 2.139323 TACGTATCCTGTCAGTGCCT 57.861 50.000 0.00 0.00 0.00 4.75
2772 3130 3.777465 TCTTACGTATCCTGTCAGTGC 57.223 47.619 0.00 0.00 0.00 4.40
2773 3131 5.043903 CCAATCTTACGTATCCTGTCAGTG 58.956 45.833 0.00 0.00 0.00 3.66
2774 3132 4.441634 GCCAATCTTACGTATCCTGTCAGT 60.442 45.833 0.00 0.00 0.00 3.41
2776 3134 3.449377 TGCCAATCTTACGTATCCTGTCA 59.551 43.478 0.00 0.00 0.00 3.58
2783 3141 3.815401 GAGCCAATGCCAATCTTACGTAT 59.185 43.478 0.00 0.00 38.69 3.06
2799 3157 1.000521 CAGCCCATCCTTGAGCCAA 60.001 57.895 0.00 0.00 0.00 4.52
2806 3164 0.625849 CTAACCACCAGCCCATCCTT 59.374 55.000 0.00 0.00 0.00 3.36
2807 3165 0.550147 ACTAACCACCAGCCCATCCT 60.550 55.000 0.00 0.00 0.00 3.24
2833 3191 1.996898 TCGTTGTTATTGCCGCTACTG 59.003 47.619 0.00 0.00 0.00 2.74
2843 3206 0.037975 ACCGGTCGCTCGTTGTTATT 60.038 50.000 0.00 0.00 0.00 1.40
2845 3208 0.940519 CAACCGGTCGCTCGTTGTTA 60.941 55.000 8.04 0.00 0.00 2.41
2858 3221 4.760047 CGGCACCTCCTCAACCGG 62.760 72.222 0.00 0.00 40.18 5.28
2866 3229 2.203070 CTACATGGCGGCACCTCC 60.203 66.667 16.34 0.00 40.22 4.30
2877 3240 4.978580 CGTACATCACCATCTCACTACATG 59.021 45.833 0.00 0.00 0.00 3.21
2878 3241 4.038042 CCGTACATCACCATCTCACTACAT 59.962 45.833 0.00 0.00 0.00 2.29
2880 3243 3.795826 GCCGTACATCACCATCTCACTAC 60.796 52.174 0.00 0.00 0.00 2.73
2889 3252 1.451207 GCCATGCCGTACATCACCA 60.451 57.895 0.00 0.00 36.64 4.17
2931 4158 1.649664 CTCGAAAGCCAGAGATGTGG 58.350 55.000 0.00 0.00 41.01 4.17
2988 4226 0.250901 AGCCGCCAAAACTCACAGAT 60.251 50.000 0.00 0.00 0.00 2.90
3008 4462 0.960364 GGCAAACTGGATGGAGCGAA 60.960 55.000 0.00 0.00 0.00 4.70
3057 4511 4.352009 ACCATACCCTTTGCATCAAATCA 58.648 39.130 0.00 0.00 32.70 2.57
3065 4519 2.373335 ACACAACCATACCCTTTGCA 57.627 45.000 0.00 0.00 0.00 4.08
3073 4527 2.081462 GCCACCACTACACAACCATAC 58.919 52.381 0.00 0.00 0.00 2.39
3097 4551 9.717942 ATAGCTACATTTGGTCAGATAGAAATC 57.282 33.333 0.00 0.00 0.00 2.17
3102 4556 6.652481 CCCAATAGCTACATTTGGTCAGATAG 59.348 42.308 18.83 3.29 38.58 2.08
3107 4561 4.853468 TCCCAATAGCTACATTTGGTCA 57.147 40.909 18.83 6.62 38.58 4.02
3113 4567 4.955811 TCACGATCCCAATAGCTACATT 57.044 40.909 0.00 0.00 0.00 2.71
3123 4577 2.621055 CACCACTTTTTCACGATCCCAA 59.379 45.455 0.00 0.00 0.00 4.12
3163 4734 7.913674 ACTGAAAAGCACAACCAAATTAAAA 57.086 28.000 0.00 0.00 0.00 1.52
3191 4763 1.070105 CCCCACGAGTTCGAAACCA 59.930 57.895 8.72 0.00 43.02 3.67
3200 4772 4.892002 GGTTTTCACCCCACGAGT 57.108 55.556 0.00 0.00 37.03 4.18
3310 5306 5.709164 CAGAGTCTGGATTCAAGGTTTTCAT 59.291 40.000 12.67 0.00 0.00 2.57
3326 6436 2.743928 GCCAACCGCCAGAGTCTG 60.744 66.667 13.56 13.56 0.00 3.51
3327 6437 2.925170 AGCCAACCGCCAGAGTCT 60.925 61.111 0.00 0.00 38.78 3.24
3329 6439 4.021925 GGAGCCAACCGCCAGAGT 62.022 66.667 0.00 0.00 38.78 3.24
3343 6453 0.248661 AAGCATCGTCGTCATCGGAG 60.249 55.000 0.00 0.00 37.69 4.63
3348 6458 1.135489 ACGTACAAGCATCGTCGTCAT 60.135 47.619 0.00 0.00 32.26 3.06
3356 6466 5.748592 AGAAAGAAACAACGTACAAGCATC 58.251 37.500 0.00 0.00 0.00 3.91
3364 6474 7.548196 ACATCTTCAAGAAAGAAACAACGTA 57.452 32.000 0.00 0.00 46.85 3.57
3375 6561 5.833406 TCAACAGCAACATCTTCAAGAAA 57.167 34.783 0.00 0.00 0.00 2.52
3411 6597 6.681729 AAGGGTGTACTTTATTGACTCAGA 57.318 37.500 0.00 0.00 0.00 3.27
3416 6602 5.697633 TCGACAAAGGGTGTACTTTATTGAC 59.302 40.000 0.00 0.00 41.96 3.18
3419 6605 6.527423 TCTTCGACAAAGGGTGTACTTTATT 58.473 36.000 0.00 0.00 41.96 1.40
3420 6606 6.105397 TCTTCGACAAAGGGTGTACTTTAT 57.895 37.500 0.00 0.00 41.96 1.40
3422 6608 4.411256 TCTTCGACAAAGGGTGTACTTT 57.589 40.909 0.00 0.00 41.96 2.66
3423 6609 4.124970 GTTCTTCGACAAAGGGTGTACTT 58.875 43.478 0.00 0.00 41.96 2.24
3424 6610 3.493873 GGTTCTTCGACAAAGGGTGTACT 60.494 47.826 0.00 0.00 41.96 2.73
3425 6611 2.804527 GGTTCTTCGACAAAGGGTGTAC 59.195 50.000 0.00 0.00 41.96 2.90
3426 6612 2.435069 TGGTTCTTCGACAAAGGGTGTA 59.565 45.455 0.00 0.00 41.96 2.90
3428 6614 1.961793 TGGTTCTTCGACAAAGGGTG 58.038 50.000 0.00 0.00 35.54 4.61
3429 6615 2.884639 CAATGGTTCTTCGACAAAGGGT 59.115 45.455 0.00 0.00 35.54 4.34
3431 6617 2.554032 AGCAATGGTTCTTCGACAAAGG 59.446 45.455 0.00 0.00 35.54 3.11
3432 6618 3.904136 AGCAATGGTTCTTCGACAAAG 57.096 42.857 0.00 0.00 36.22 2.77
3433 6619 4.213270 CAGTAGCAATGGTTCTTCGACAAA 59.787 41.667 0.00 0.00 0.00 2.83
3434 6620 3.745975 CAGTAGCAATGGTTCTTCGACAA 59.254 43.478 0.00 0.00 0.00 3.18
3435 6621 3.006430 TCAGTAGCAATGGTTCTTCGACA 59.994 43.478 0.00 0.00 0.00 4.35
3436 6622 3.368236 GTCAGTAGCAATGGTTCTTCGAC 59.632 47.826 0.00 0.00 0.00 4.20
3437 6623 3.585862 GTCAGTAGCAATGGTTCTTCGA 58.414 45.455 0.00 0.00 0.00 3.71
3438 6624 2.673368 GGTCAGTAGCAATGGTTCTTCG 59.327 50.000 0.00 0.00 0.00 3.79
3439 6625 3.686726 CAGGTCAGTAGCAATGGTTCTTC 59.313 47.826 0.00 0.00 0.00 2.87
3440 6626 3.073062 ACAGGTCAGTAGCAATGGTTCTT 59.927 43.478 0.00 0.00 0.00 2.52
3441 6627 2.639839 ACAGGTCAGTAGCAATGGTTCT 59.360 45.455 0.00 0.00 0.00 3.01
3442 6628 2.744202 CACAGGTCAGTAGCAATGGTTC 59.256 50.000 0.00 0.00 0.00 3.62
3444 6630 1.699634 ACACAGGTCAGTAGCAATGGT 59.300 47.619 0.00 0.00 0.00 3.55
3445 6631 2.479566 ACACAGGTCAGTAGCAATGG 57.520 50.000 0.00 0.00 0.00 3.16
3446 6632 4.539870 CAAAACACAGGTCAGTAGCAATG 58.460 43.478 0.00 0.00 0.00 2.82
3447 6633 3.004734 GCAAAACACAGGTCAGTAGCAAT 59.995 43.478 0.00 0.00 0.00 3.56
3448 6634 2.357637 GCAAAACACAGGTCAGTAGCAA 59.642 45.455 0.00 0.00 0.00 3.91
3449 6635 1.946768 GCAAAACACAGGTCAGTAGCA 59.053 47.619 0.00 0.00 0.00 3.49
3450 6636 2.222027 AGCAAAACACAGGTCAGTAGC 58.778 47.619 0.00 0.00 0.00 3.58
3452 6638 5.222079 TGATAGCAAAACACAGGTCAGTA 57.778 39.130 0.00 0.00 0.00 2.74
3453 6639 4.085357 TGATAGCAAAACACAGGTCAGT 57.915 40.909 0.00 0.00 0.00 3.41
3455 6641 6.150976 CCTAATTGATAGCAAAACACAGGTCA 59.849 38.462 0.00 0.00 37.59 4.02
3456 6642 6.151144 ACCTAATTGATAGCAAAACACAGGTC 59.849 38.462 0.00 0.00 37.59 3.85
3458 6644 6.515272 ACCTAATTGATAGCAAAACACAGG 57.485 37.500 0.00 3.02 37.59 4.00
3459 6645 6.308766 GCAACCTAATTGATAGCAAAACACAG 59.691 38.462 0.00 0.00 41.23 3.66
3460 6646 6.155827 GCAACCTAATTGATAGCAAAACACA 58.844 36.000 0.00 0.00 41.23 3.72
3462 6648 5.244851 TGGCAACCTAATTGATAGCAAAACA 59.755 36.000 0.00 0.00 41.23 2.83
3463 6649 5.576774 GTGGCAACCTAATTGATAGCAAAAC 59.423 40.000 0.00 0.00 41.23 2.43
3464 6650 5.244851 TGTGGCAACCTAATTGATAGCAAAA 59.755 36.000 0.00 0.00 41.23 2.44
3465 6651 4.769488 TGTGGCAACCTAATTGATAGCAAA 59.231 37.500 0.00 0.00 41.23 3.68
3466 6652 4.339748 TGTGGCAACCTAATTGATAGCAA 58.660 39.130 0.00 0.00 41.23 3.91
3468 6654 5.300286 AGAATGTGGCAACCTAATTGATAGC 59.700 40.000 0.00 0.00 41.23 2.97
3470 6656 5.827797 GGAGAATGTGGCAACCTAATTGATA 59.172 40.000 0.00 0.00 41.23 2.15
3471 6657 4.646492 GGAGAATGTGGCAACCTAATTGAT 59.354 41.667 0.00 0.00 41.23 2.57
3472 6658 4.016444 GGAGAATGTGGCAACCTAATTGA 58.984 43.478 0.00 0.00 41.23 2.57
3473 6659 3.181497 CGGAGAATGTGGCAACCTAATTG 60.181 47.826 0.00 0.00 41.69 2.32
3474 6660 3.016736 CGGAGAATGTGGCAACCTAATT 58.983 45.455 0.00 0.00 0.00 1.40
3475 6661 2.026262 ACGGAGAATGTGGCAACCTAAT 60.026 45.455 0.00 0.00 0.00 1.73
3477 6663 0.981183 ACGGAGAATGTGGCAACCTA 59.019 50.000 0.00 0.00 0.00 3.08
3478 6664 0.981183 TACGGAGAATGTGGCAACCT 59.019 50.000 0.00 0.00 0.00 3.50
3479 6665 1.670811 CATACGGAGAATGTGGCAACC 59.329 52.381 0.00 0.00 0.00 3.77
3480 6666 2.627945 TCATACGGAGAATGTGGCAAC 58.372 47.619 0.00 0.00 0.00 4.17
3482 7275 3.118445 TGATTCATACGGAGAATGTGGCA 60.118 43.478 4.34 0.00 35.93 4.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.