Multiple sequence alignment - TraesCS3B01G035200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G035200 chr3B 100.000 5188 0 0 272 5459 17186505 17191692 0.000000e+00 9581.0
1 TraesCS3B01G035200 chr3B 74.386 285 49 16 4809 5088 3265069 3265334 3.480000e-17 100.0
2 TraesCS3B01G035200 chr3B 100.000 49 0 0 1 49 17186234 17186282 2.090000e-14 91.6
3 TraesCS3B01G035200 chr3B 94.595 37 2 0 5044 5080 178373170 178373206 2.120000e-04 58.4
4 TraesCS3B01G035200 chr3A 92.721 2102 124 13 2731 4815 25116851 25114762 0.000000e+00 3007.0
5 TraesCS3B01G035200 chr3A 85.126 1385 88 54 527 1826 25118912 25117561 0.000000e+00 1308.0
6 TraesCS3B01G035200 chr3A 88.855 655 67 5 4809 5459 25114269 25113617 0.000000e+00 800.0
7 TraesCS3B01G035200 chr3A 80.829 193 18 5 4548 4730 689504428 689504245 3.430000e-27 134.0
8 TraesCS3B01G035200 chr3A 83.333 126 7 2 2080 2204 25117353 25117241 2.690000e-18 104.0
9 TraesCS3B01G035200 chr3A 77.778 180 23 10 4911 5088 618160555 618160391 1.620000e-15 95.3
10 TraesCS3B01G035200 chr3D 90.256 2309 152 49 2397 4677 11974585 11976848 0.000000e+00 2950.0
11 TraesCS3B01G035200 chr3D 82.436 1560 97 72 660 2129 11971388 11972860 0.000000e+00 1199.0
12 TraesCS3B01G035200 chr3D 87.675 787 34 17 556 1289 11928808 11929584 0.000000e+00 857.0
13 TraesCS3B01G035200 chr3D 88.538 506 51 4 4854 5355 11977622 11978124 1.680000e-169 606.0
14 TraesCS3B01G035200 chr3D 92.800 250 18 0 272 521 468651527 468651776 4.020000e-96 363.0
15 TraesCS3B01G035200 chr3D 86.228 167 12 8 2710 2866 11944699 11944864 2.610000e-38 171.0
16 TraesCS3B01G035200 chr3D 87.619 105 9 3 1618 1722 538356425 538356325 9.610000e-23 119.0
17 TraesCS3B01G035200 chr1B 88.993 1708 156 17 2766 4461 16189997 16188310 0.000000e+00 2084.0
18 TraesCS3B01G035200 chr1B 93.600 250 15 1 272 521 568960366 568960614 6.680000e-99 372.0
19 TraesCS3B01G035200 chr1B 91.635 263 20 1 272 532 69909537 69909275 4.020000e-96 363.0
20 TraesCS3B01G035200 chr1B 79.237 472 59 25 855 1291 16191519 16191052 5.350000e-75 292.0
21 TraesCS3B01G035200 chr1B 97.959 49 1 0 1 49 560433349 560433397 9.740000e-13 86.1
22 TraesCS3B01G035200 chr1A 89.117 1314 131 6 2764 4065 12862328 12861015 0.000000e+00 1624.0
23 TraesCS3B01G035200 chr6D 89.071 366 37 2 5093 5457 244654911 244655274 8.340000e-123 451.0
24 TraesCS3B01G035200 chr6B 88.859 368 40 1 5091 5457 512220122 512220489 8.340000e-123 451.0
25 TraesCS3B01G035200 chr6B 88.556 367 41 1 5092 5457 334976434 334976800 1.400000e-120 444.0
26 TraesCS3B01G035200 chr6B 93.385 257 17 0 272 528 664655861 664655605 1.110000e-101 381.0
27 TraesCS3B01G035200 chr5D 88.919 370 34 6 5091 5456 130468881 130468515 3.000000e-122 449.0
28 TraesCS3B01G035200 chr1D 89.577 355 34 3 5091 5442 479045698 479046052 1.080000e-121 448.0
29 TraesCS3B01G035200 chr6A 88.251 366 42 1 5091 5455 452197475 452197110 2.330000e-118 436.0
30 TraesCS3B01G035200 chr4D 88.011 367 43 1 5091 5457 503924755 503925120 3.020000e-117 433.0
31 TraesCS3B01G035200 chr4D 78.771 179 34 4 4911 5085 418745667 418745845 3.450000e-22 117.0
32 TraesCS3B01G035200 chr4B 76.726 782 144 33 2798 3561 27242039 27241278 8.520000e-108 401.0
33 TraesCS3B01G035200 chr4B 100.000 49 0 0 1 49 1269134 1269086 2.090000e-14 91.6
34 TraesCS3B01G035200 chr4B 92.105 38 3 0 1618 1655 610800986 610800949 3.000000e-03 54.7
35 TraesCS3B01G035200 chr2B 93.600 250 16 0 272 521 664467549 664467300 1.860000e-99 374.0
36 TraesCS3B01G035200 chr2B 86.139 101 12 2 1618 1717 49610454 49610355 2.080000e-19 108.0
37 TraesCS3B01G035200 chr2B 97.959 49 1 0 1 49 664467647 664467599 9.740000e-13 86.1
38 TraesCS3B01G035200 chr7D 92.460 252 19 0 272 523 601717366 601717617 1.450000e-95 361.0
39 TraesCS3B01G035200 chr7D 91.860 258 20 1 272 528 313369277 313369534 5.200000e-95 359.0
40 TraesCS3B01G035200 chr7D 91.406 256 22 0 272 527 322918021 322917766 8.700000e-93 351.0
41 TraesCS3B01G035200 chr7D 82.639 288 30 9 4543 4814 427897192 427896909 2.540000e-58 237.0
42 TraesCS3B01G035200 chr7D 86.139 101 12 2 1618 1717 205652411 205652510 2.080000e-19 108.0
43 TraesCS3B01G035200 chr2D 92.188 256 18 1 272 527 606976321 606976068 1.450000e-95 361.0
44 TraesCS3B01G035200 chr2A 83.824 272 28 8 4548 4808 714225484 714225218 1.520000e-60 244.0
45 TraesCS3B01G035200 chr7B 86.139 101 12 2 1618 1717 702501987 702501888 2.080000e-19 108.0
46 TraesCS3B01G035200 chr4A 86.139 101 12 2 1618 1717 663303664 663303763 2.080000e-19 108.0
47 TraesCS3B01G035200 chr5B 100.000 49 0 0 1 49 54158364 54158316 2.090000e-14 91.6
48 TraesCS3B01G035200 chr5B 95.918 49 2 0 1 49 320420220 320420172 4.530000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G035200 chr3B 17186234 17191692 5458 False 4836.30 9581 100.000000 1 5459 2 chr3B.!!$F3 5458
1 TraesCS3B01G035200 chr3A 25113617 25118912 5295 True 1304.75 3007 87.508750 527 5459 4 chr3A.!!$R3 4932
2 TraesCS3B01G035200 chr3D 11971388 11978124 6736 False 1585.00 2950 87.076667 660 5355 3 chr3D.!!$F4 4695
3 TraesCS3B01G035200 chr3D 11928808 11929584 776 False 857.00 857 87.675000 556 1289 1 chr3D.!!$F1 733
4 TraesCS3B01G035200 chr1B 16188310 16191519 3209 True 1188.00 2084 84.115000 855 4461 2 chr1B.!!$R2 3606
5 TraesCS3B01G035200 chr1A 12861015 12862328 1313 True 1624.00 1624 89.117000 2764 4065 1 chr1A.!!$R1 1301
6 TraesCS3B01G035200 chr4B 27241278 27242039 761 True 401.00 401 76.726000 2798 3561 1 chr4B.!!$R2 763

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
464 465 0.036671 TAGAGACTGCTGGACGACGA 60.037 55.0 0.00 0.0 0.00 4.20 F
1919 2561 0.036875 CACCCTCCCAACTCTTCCAC 59.963 60.0 0.00 0.0 0.00 4.02 F
2306 2986 0.105760 ATGTGGTTTGTCCCAGCCAA 60.106 50.0 0.00 0.0 34.43 4.52 F
3607 5787 0.179111 GGAGATCGCGGATGTTGTCA 60.179 55.0 6.13 0.0 0.00 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2310 2990 0.030773 GATGCTGATGCTGCCACATG 59.969 55.0 0.0 0.0 40.48 3.21 R
2877 5053 0.680921 CCTTCATGGCCACGATGGTT 60.681 55.0 22.2 0.0 40.46 3.67 R
4149 6332 0.904865 TCTTCCATCCACGCTCCTGT 60.905 55.0 0.0 0.0 0.00 4.00 R
5139 7994 0.462047 CGCATCCCCACTCCAGTTAC 60.462 60.0 0.0 0.0 0.00 2.50 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.738521 CGACTGAACTGCGGGGTG 60.739 66.667 0.00 0.00 0.00 4.61
18 19 2.358737 GACTGAACTGCGGGGTGG 60.359 66.667 0.00 0.00 0.00 4.61
19 20 3.901797 GACTGAACTGCGGGGTGGG 62.902 68.421 0.00 0.00 0.00 4.61
20 21 3.953775 CTGAACTGCGGGGTGGGT 61.954 66.667 0.00 0.00 0.00 4.51
21 22 3.491598 CTGAACTGCGGGGTGGGTT 62.492 63.158 0.00 0.00 0.00 4.11
22 23 2.983592 GAACTGCGGGGTGGGTTG 60.984 66.667 0.00 0.00 0.00 3.77
23 24 3.785122 GAACTGCGGGGTGGGTTGT 62.785 63.158 0.00 0.00 0.00 3.32
24 25 4.579384 ACTGCGGGGTGGGTTGTG 62.579 66.667 0.00 0.00 0.00 3.33
30 31 3.956314 GGGTGGGTTGTGCGGGTA 61.956 66.667 0.00 0.00 0.00 3.69
31 32 2.113562 GGTGGGTTGTGCGGGTAA 59.886 61.111 0.00 0.00 0.00 2.85
32 33 1.969589 GGTGGGTTGTGCGGGTAAG 60.970 63.158 0.00 0.00 0.00 2.34
33 34 1.228033 GTGGGTTGTGCGGGTAAGT 60.228 57.895 0.00 0.00 0.00 2.24
34 35 1.228003 TGGGTTGTGCGGGTAAGTG 60.228 57.895 0.00 0.00 0.00 3.16
35 36 1.071814 GGGTTGTGCGGGTAAGTGA 59.928 57.895 0.00 0.00 0.00 3.41
36 37 0.953960 GGGTTGTGCGGGTAAGTGAG 60.954 60.000 0.00 0.00 0.00 3.51
37 38 0.953960 GGTTGTGCGGGTAAGTGAGG 60.954 60.000 0.00 0.00 0.00 3.86
38 39 0.953960 GTTGTGCGGGTAAGTGAGGG 60.954 60.000 0.00 0.00 0.00 4.30
39 40 2.119484 TTGTGCGGGTAAGTGAGGGG 62.119 60.000 0.00 0.00 0.00 4.79
40 41 2.120940 TGCGGGTAAGTGAGGGGA 59.879 61.111 0.00 0.00 0.00 4.81
41 42 1.987855 TGCGGGTAAGTGAGGGGAG 60.988 63.158 0.00 0.00 0.00 4.30
42 43 2.732619 GCGGGTAAGTGAGGGGAGG 61.733 68.421 0.00 0.00 0.00 4.30
43 44 1.001248 CGGGTAAGTGAGGGGAGGA 59.999 63.158 0.00 0.00 0.00 3.71
44 45 1.043673 CGGGTAAGTGAGGGGAGGAG 61.044 65.000 0.00 0.00 0.00 3.69
45 46 0.042881 GGGTAAGTGAGGGGAGGAGT 59.957 60.000 0.00 0.00 0.00 3.85
46 47 1.290130 GGGTAAGTGAGGGGAGGAGTA 59.710 57.143 0.00 0.00 0.00 2.59
47 48 2.292719 GGGTAAGTGAGGGGAGGAGTAA 60.293 54.545 0.00 0.00 0.00 2.24
48 49 3.447950 GGTAAGTGAGGGGAGGAGTAAA 58.552 50.000 0.00 0.00 0.00 2.01
289 290 3.708734 CAACAACGGACGGGCGTC 61.709 66.667 0.00 0.00 43.87 5.19
316 317 3.114616 CGCAGAGCAGTTCCACCG 61.115 66.667 0.00 0.00 0.00 4.94
317 318 3.426568 GCAGAGCAGTTCCACCGC 61.427 66.667 0.00 0.00 0.00 5.68
318 319 2.031012 CAGAGCAGTTCCACCGCA 59.969 61.111 0.00 0.00 0.00 5.69
319 320 2.031163 AGAGCAGTTCCACCGCAC 59.969 61.111 0.00 0.00 0.00 5.34
320 321 3.414700 GAGCAGTTCCACCGCACG 61.415 66.667 0.00 0.00 0.00 5.34
341 342 4.680237 CCGAGTGGCAACCGCTGA 62.680 66.667 4.05 0.00 45.19 4.26
342 343 3.414700 CGAGTGGCAACCGCTGAC 61.415 66.667 4.05 0.00 45.19 3.51
343 344 3.050275 GAGTGGCAACCGCTGACC 61.050 66.667 4.05 0.00 45.19 4.02
344 345 4.988598 AGTGGCAACCGCTGACCG 62.989 66.667 0.00 0.00 43.37 4.79
375 376 2.125269 GGCGTGTGGGCGAACTAT 60.125 61.111 0.00 0.00 0.00 2.12
376 377 2.461110 GGCGTGTGGGCGAACTATG 61.461 63.158 0.00 0.00 0.00 2.23
377 378 1.740296 GCGTGTGGGCGAACTATGT 60.740 57.895 0.00 0.00 0.00 2.29
378 379 1.693083 GCGTGTGGGCGAACTATGTC 61.693 60.000 0.00 0.00 0.00 3.06
379 380 0.389296 CGTGTGGGCGAACTATGTCA 60.389 55.000 0.00 0.00 0.00 3.58
380 381 1.076332 GTGTGGGCGAACTATGTCAC 58.924 55.000 0.00 0.00 0.00 3.67
381 382 0.682292 TGTGGGCGAACTATGTCACA 59.318 50.000 0.00 0.00 33.48 3.58
382 383 1.076332 GTGGGCGAACTATGTCACAC 58.924 55.000 0.00 0.00 0.00 3.82
383 384 0.682292 TGGGCGAACTATGTCACACA 59.318 50.000 0.00 0.00 0.00 3.72
384 385 1.076332 GGGCGAACTATGTCACACAC 58.924 55.000 0.00 0.00 0.00 3.82
385 386 1.076332 GGCGAACTATGTCACACACC 58.924 55.000 0.00 0.00 0.00 4.16
386 387 1.606994 GGCGAACTATGTCACACACCA 60.607 52.381 0.00 0.00 0.00 4.17
387 388 1.459592 GCGAACTATGTCACACACCAC 59.540 52.381 0.00 0.00 0.00 4.16
388 389 2.749776 CGAACTATGTCACACACCACA 58.250 47.619 0.00 0.00 0.00 4.17
389 390 2.475111 CGAACTATGTCACACACCACAC 59.525 50.000 0.00 0.00 0.00 3.82
390 391 3.462982 GAACTATGTCACACACCACACA 58.537 45.455 0.00 0.00 0.00 3.72
391 392 2.833794 ACTATGTCACACACCACACAC 58.166 47.619 0.00 0.00 0.00 3.82
392 393 1.792367 CTATGTCACACACCACACACG 59.208 52.381 0.00 0.00 0.00 4.49
393 394 1.436195 ATGTCACACACCACACACGC 61.436 55.000 0.00 0.00 0.00 5.34
394 395 2.888051 TCACACACCACACACGCG 60.888 61.111 3.53 3.53 0.00 6.01
395 396 4.589700 CACACACCACACACGCGC 62.590 66.667 5.73 0.00 0.00 6.86
398 399 4.849310 ACACCACACACGCGCCTT 62.849 61.111 5.73 0.00 0.00 4.35
399 400 4.312231 CACCACACACGCGCCTTG 62.312 66.667 5.73 2.82 0.00 3.61
400 401 4.849310 ACCACACACGCGCCTTGT 62.849 61.111 5.73 3.60 0.00 3.16
401 402 4.012895 CCACACACGCGCCTTGTC 62.013 66.667 5.73 0.00 0.00 3.18
402 403 4.012895 CACACACGCGCCTTGTCC 62.013 66.667 5.73 0.00 0.00 4.02
403 404 4.235762 ACACACGCGCCTTGTCCT 62.236 61.111 5.73 0.00 0.00 3.85
404 405 2.048597 CACACGCGCCTTGTCCTA 60.049 61.111 5.73 0.00 0.00 2.94
405 406 1.447838 CACACGCGCCTTGTCCTAT 60.448 57.895 5.73 0.00 0.00 2.57
406 407 1.447838 ACACGCGCCTTGTCCTATG 60.448 57.895 5.73 0.00 0.00 2.23
407 408 1.447838 CACGCGCCTTGTCCTATGT 60.448 57.895 5.73 0.00 0.00 2.29
408 409 1.447838 ACGCGCCTTGTCCTATGTG 60.448 57.895 5.73 0.00 0.00 3.21
409 410 2.173669 CGCGCCTTGTCCTATGTGG 61.174 63.158 0.00 0.00 37.10 4.17
410 411 2.472909 GCGCCTTGTCCTATGTGGC 61.473 63.158 0.00 0.00 40.14 5.01
411 412 1.078497 CGCCTTGTCCTATGTGGCA 60.078 57.895 0.00 0.00 43.38 4.92
412 413 0.464373 CGCCTTGTCCTATGTGGCAT 60.464 55.000 0.00 0.00 43.38 4.40
413 414 1.202639 CGCCTTGTCCTATGTGGCATA 60.203 52.381 0.00 0.00 43.38 3.14
414 415 2.222027 GCCTTGTCCTATGTGGCATAC 58.778 52.381 0.00 0.00 42.79 2.39
415 416 2.421388 GCCTTGTCCTATGTGGCATACA 60.421 50.000 0.00 0.00 44.87 2.29
416 417 3.884895 CCTTGTCCTATGTGGCATACAA 58.115 45.455 0.00 0.00 43.77 2.41
417 418 4.269183 CCTTGTCCTATGTGGCATACAAA 58.731 43.478 0.00 0.00 43.77 2.83
418 419 4.704540 CCTTGTCCTATGTGGCATACAAAA 59.295 41.667 0.00 0.00 43.77 2.44
419 420 5.360714 CCTTGTCCTATGTGGCATACAAAAT 59.639 40.000 0.00 0.00 43.77 1.82
420 421 6.449635 TTGTCCTATGTGGCATACAAAATC 57.550 37.500 0.00 0.00 43.77 2.17
421 422 5.504853 TGTCCTATGTGGCATACAAAATCA 58.495 37.500 0.00 0.00 43.77 2.57
422 423 5.589855 TGTCCTATGTGGCATACAAAATCAG 59.410 40.000 0.00 0.00 43.77 2.90
423 424 4.580167 TCCTATGTGGCATACAAAATCAGC 59.420 41.667 0.00 0.00 43.77 4.26
424 425 3.806625 ATGTGGCATACAAAATCAGCC 57.193 42.857 0.00 0.00 43.77 4.85
429 430 4.926860 GGCATACAAAATCAGCCAAAAC 57.073 40.909 0.00 0.00 44.59 2.43
430 431 4.314121 GGCATACAAAATCAGCCAAAACA 58.686 39.130 0.00 0.00 44.59 2.83
431 432 4.937015 GGCATACAAAATCAGCCAAAACAT 59.063 37.500 0.00 0.00 44.59 2.71
432 433 5.163834 GGCATACAAAATCAGCCAAAACATG 60.164 40.000 0.00 0.00 44.59 3.21
433 434 5.671825 GCATACAAAATCAGCCAAAACATGC 60.672 40.000 0.00 0.00 0.00 4.06
434 435 3.140623 ACAAAATCAGCCAAAACATGCC 58.859 40.909 0.00 0.00 0.00 4.40
435 436 3.139850 CAAAATCAGCCAAAACATGCCA 58.860 40.909 0.00 0.00 0.00 4.92
436 437 3.488778 AAATCAGCCAAAACATGCCAA 57.511 38.095 0.00 0.00 0.00 4.52
437 438 2.754946 ATCAGCCAAAACATGCCAAG 57.245 45.000 0.00 0.00 0.00 3.61
438 439 1.702182 TCAGCCAAAACATGCCAAGA 58.298 45.000 0.00 0.00 0.00 3.02
439 440 2.250031 TCAGCCAAAACATGCCAAGAT 58.750 42.857 0.00 0.00 0.00 2.40
440 441 2.633967 TCAGCCAAAACATGCCAAGATT 59.366 40.909 0.00 0.00 0.00 2.40
441 442 2.997986 CAGCCAAAACATGCCAAGATTC 59.002 45.455 0.00 0.00 0.00 2.52
442 443 1.994779 GCCAAAACATGCCAAGATTCG 59.005 47.619 0.00 0.00 0.00 3.34
443 444 2.610232 GCCAAAACATGCCAAGATTCGT 60.610 45.455 0.00 0.00 0.00 3.85
444 445 2.988493 CCAAAACATGCCAAGATTCGTG 59.012 45.455 0.00 0.00 0.00 4.35
445 446 3.552684 CCAAAACATGCCAAGATTCGTGT 60.553 43.478 0.00 0.00 34.21 4.49
446 447 4.320861 CCAAAACATGCCAAGATTCGTGTA 60.321 41.667 0.00 0.00 32.63 2.90
447 448 4.685169 AAACATGCCAAGATTCGTGTAG 57.315 40.909 0.00 0.00 32.63 2.74
448 449 3.610040 ACATGCCAAGATTCGTGTAGA 57.390 42.857 0.00 0.00 31.30 2.59
449 450 3.525537 ACATGCCAAGATTCGTGTAGAG 58.474 45.455 0.00 0.00 31.30 2.43
450 451 3.195610 ACATGCCAAGATTCGTGTAGAGA 59.804 43.478 0.00 0.00 31.30 3.10
451 452 3.232213 TGCCAAGATTCGTGTAGAGAC 57.768 47.619 0.00 0.00 0.00 3.36
452 453 2.826128 TGCCAAGATTCGTGTAGAGACT 59.174 45.455 0.00 0.00 0.00 3.24
453 454 3.182967 GCCAAGATTCGTGTAGAGACTG 58.817 50.000 0.00 0.00 0.00 3.51
454 455 3.182967 CCAAGATTCGTGTAGAGACTGC 58.817 50.000 0.00 0.00 0.00 4.40
455 456 3.119316 CCAAGATTCGTGTAGAGACTGCT 60.119 47.826 0.00 0.00 0.00 4.24
456 457 3.773860 AGATTCGTGTAGAGACTGCTG 57.226 47.619 0.00 0.00 0.00 4.41
457 458 2.425312 AGATTCGTGTAGAGACTGCTGG 59.575 50.000 0.00 0.00 0.00 4.85
458 459 1.905637 TTCGTGTAGAGACTGCTGGA 58.094 50.000 0.00 0.00 0.00 3.86
459 460 1.166129 TCGTGTAGAGACTGCTGGAC 58.834 55.000 0.00 0.00 0.00 4.02
460 461 0.179187 CGTGTAGAGACTGCTGGACG 60.179 60.000 0.00 0.00 0.00 4.79
461 462 1.166129 GTGTAGAGACTGCTGGACGA 58.834 55.000 0.00 0.00 0.00 4.20
462 463 1.135632 GTGTAGAGACTGCTGGACGAC 60.136 57.143 0.00 0.00 0.00 4.34
463 464 0.097325 GTAGAGACTGCTGGACGACG 59.903 60.000 0.00 0.00 0.00 5.12
464 465 0.036671 TAGAGACTGCTGGACGACGA 60.037 55.000 0.00 0.00 0.00 4.20
465 466 0.678366 AGAGACTGCTGGACGACGAT 60.678 55.000 0.00 0.00 0.00 3.73
466 467 0.524392 GAGACTGCTGGACGACGATG 60.524 60.000 0.00 0.00 0.00 3.84
467 468 0.960861 AGACTGCTGGACGACGATGA 60.961 55.000 0.00 0.00 0.00 2.92
468 469 0.109272 GACTGCTGGACGACGATGAA 60.109 55.000 0.00 0.00 0.00 2.57
469 470 0.109086 ACTGCTGGACGACGATGAAG 60.109 55.000 0.00 0.00 0.00 3.02
470 471 0.803768 CTGCTGGACGACGATGAAGG 60.804 60.000 0.00 0.00 0.00 3.46
471 472 2.167861 GCTGGACGACGATGAAGGC 61.168 63.158 0.00 0.00 0.00 4.35
476 477 3.072598 CGACGATGAAGGCGTGTG 58.927 61.111 0.00 0.00 42.77 3.82
477 478 1.443702 CGACGATGAAGGCGTGTGA 60.444 57.895 0.00 0.00 42.77 3.58
478 479 1.674611 CGACGATGAAGGCGTGTGAC 61.675 60.000 0.00 0.00 42.77 3.67
479 480 0.388649 GACGATGAAGGCGTGTGACT 60.389 55.000 0.00 0.00 42.77 3.41
480 481 0.667487 ACGATGAAGGCGTGTGACTG 60.667 55.000 0.00 0.00 40.94 3.51
481 482 0.388520 CGATGAAGGCGTGTGACTGA 60.389 55.000 0.00 0.00 29.56 3.41
482 483 1.354040 GATGAAGGCGTGTGACTGAG 58.646 55.000 0.00 0.00 29.56 3.35
483 484 0.969149 ATGAAGGCGTGTGACTGAGA 59.031 50.000 0.00 0.00 29.56 3.27
484 485 0.969149 TGAAGGCGTGTGACTGAGAT 59.031 50.000 0.00 0.00 29.56 2.75
485 486 1.337167 TGAAGGCGTGTGACTGAGATG 60.337 52.381 0.00 0.00 29.56 2.90
486 487 0.671781 AAGGCGTGTGACTGAGATGC 60.672 55.000 0.00 0.00 29.56 3.91
487 488 2.103042 GGCGTGTGACTGAGATGCC 61.103 63.158 0.00 0.00 42.50 4.40
488 489 1.079543 GCGTGTGACTGAGATGCCT 60.080 57.895 0.00 0.00 0.00 4.75
489 490 0.173481 GCGTGTGACTGAGATGCCTA 59.827 55.000 0.00 0.00 0.00 3.93
490 491 1.404181 GCGTGTGACTGAGATGCCTAA 60.404 52.381 0.00 0.00 0.00 2.69
491 492 2.263077 CGTGTGACTGAGATGCCTAAC 58.737 52.381 0.00 0.00 0.00 2.34
492 493 2.263077 GTGTGACTGAGATGCCTAACG 58.737 52.381 0.00 0.00 0.00 3.18
493 494 1.281899 GTGACTGAGATGCCTAACGC 58.718 55.000 0.00 0.00 38.31 4.84
494 495 0.175760 TGACTGAGATGCCTAACGCC 59.824 55.000 0.00 0.00 36.24 5.68
495 496 0.530870 GACTGAGATGCCTAACGCCC 60.531 60.000 0.00 0.00 36.24 6.13
496 497 1.264749 ACTGAGATGCCTAACGCCCA 61.265 55.000 0.00 0.00 36.24 5.36
497 498 0.811616 CTGAGATGCCTAACGCCCAC 60.812 60.000 0.00 0.00 36.24 4.61
498 499 1.220749 GAGATGCCTAACGCCCACA 59.779 57.895 0.00 0.00 36.24 4.17
499 500 1.078426 AGATGCCTAACGCCCACAC 60.078 57.895 0.00 0.00 36.24 3.82
500 501 1.376683 GATGCCTAACGCCCACACA 60.377 57.895 0.00 0.00 36.24 3.72
501 502 0.748005 GATGCCTAACGCCCACACAT 60.748 55.000 0.00 0.00 36.24 3.21
502 503 1.031571 ATGCCTAACGCCCACACATG 61.032 55.000 0.00 0.00 36.24 3.21
503 504 1.674322 GCCTAACGCCCACACATGT 60.674 57.895 0.00 0.00 0.00 3.21
504 505 1.922135 GCCTAACGCCCACACATGTG 61.922 60.000 24.25 24.25 45.23 3.21
517 518 4.829064 ACACATGTGAGCGTTAACATTT 57.171 36.364 31.94 1.65 34.81 2.32
518 519 4.783242 ACACATGTGAGCGTTAACATTTC 58.217 39.130 31.94 0.58 34.81 2.17
519 520 4.158384 CACATGTGAGCGTTAACATTTCC 58.842 43.478 21.64 0.00 34.81 3.13
520 521 3.120338 ACATGTGAGCGTTAACATTTCCG 60.120 43.478 6.39 0.00 34.81 4.30
521 522 2.756829 TGTGAGCGTTAACATTTCCGA 58.243 42.857 6.39 0.00 0.00 4.55
522 523 3.132160 TGTGAGCGTTAACATTTCCGAA 58.868 40.909 6.39 0.00 0.00 4.30
523 524 3.749088 TGTGAGCGTTAACATTTCCGAAT 59.251 39.130 6.39 0.00 0.00 3.34
524 525 4.930405 TGTGAGCGTTAACATTTCCGAATA 59.070 37.500 6.39 0.00 0.00 1.75
525 526 5.408909 TGTGAGCGTTAACATTTCCGAATAA 59.591 36.000 6.39 0.00 0.00 1.40
538 539 7.444487 ACATTTCCGAATAAATTAGCTAGTCCC 59.556 37.037 0.00 0.00 0.00 4.46
552 553 0.921896 AGTCCCCATGTCATTCCTGG 59.078 55.000 0.00 0.00 0.00 4.45
576 577 3.002656 AGAATGATTCGCGTGGCTTATTG 59.997 43.478 5.77 0.00 34.02 1.90
577 578 1.013596 TGATTCGCGTGGCTTATTGG 58.986 50.000 5.77 0.00 0.00 3.16
643 644 4.021368 TGGAACCTTAGAAGAGAAACGAGG 60.021 45.833 0.00 0.00 0.00 4.63
831 850 3.192422 CACACCAATAAATTCGCCTTCCA 59.808 43.478 0.00 0.00 0.00 3.53
843 887 1.301401 CCTTCCACGTCGCTTTCCA 60.301 57.895 0.00 0.00 0.00 3.53
901 950 0.593773 CCAAAACCAGCGGACAAACG 60.594 55.000 1.50 0.00 0.00 3.60
1080 1176 4.144703 GACGGCGAGGAGGGGAAC 62.145 72.222 16.62 0.00 0.00 3.62
1237 1333 4.097828 CCATGTGGGTACGTACGC 57.902 61.111 29.83 29.83 39.33 4.42
1266 1374 0.773644 TGCCTTTTCCTTCTCTGCCT 59.226 50.000 0.00 0.00 0.00 4.75
1267 1375 1.172175 GCCTTTTCCTTCTCTGCCTG 58.828 55.000 0.00 0.00 0.00 4.85
1268 1376 1.172175 CCTTTTCCTTCTCTGCCTGC 58.828 55.000 0.00 0.00 0.00 4.85
1269 1377 1.172175 CTTTTCCTTCTCTGCCTGCC 58.828 55.000 0.00 0.00 0.00 4.85
1291 1402 1.473080 GCCTCTCTGTTCTCATCTGCC 60.473 57.143 0.00 0.00 0.00 4.85
1379 1490 3.300009 GTTGAAGCGACTGTTCAATTGG 58.700 45.455 5.42 0.00 43.83 3.16
1396 1507 1.102154 TGGTCAGTGTTGGCTTGTTG 58.898 50.000 0.00 0.00 0.00 3.33
1433 2022 8.462016 AGAAATTTATCTTTCCGTTCCTTCATG 58.538 33.333 0.00 0.00 36.06 3.07
1434 2023 7.703058 AATTTATCTTTCCGTTCCTTCATGT 57.297 32.000 0.00 0.00 0.00 3.21
1438 2027 3.938963 TCTTTCCGTTCCTTCATGTATGC 59.061 43.478 0.00 0.00 0.00 3.14
1472 2061 7.271511 CAGAGACTATAATGCTTTCCTTCAGT 58.728 38.462 0.00 0.00 0.00 3.41
1553 2160 5.468072 AGTTTATGCGCCTAATCATCTTGAG 59.532 40.000 4.18 0.00 0.00 3.02
1557 2164 2.057316 CGCCTAATCATCTTGAGCTCG 58.943 52.381 9.64 0.00 0.00 5.03
1607 2224 3.432186 CCCACTAATTTCAGAGATGCCGA 60.432 47.826 0.00 0.00 0.00 5.54
1613 2230 0.252761 TTCAGAGATGCCGATGCCAA 59.747 50.000 0.00 0.00 36.33 4.52
1628 2264 4.559300 CGATGCCAAACCATGTCTTTTCTT 60.559 41.667 0.00 0.00 0.00 2.52
1649 2286 3.764237 GGTTCTCTACCAGAAACCACA 57.236 47.619 11.86 0.00 42.45 4.17
1650 2287 3.400255 GGTTCTCTACCAGAAACCACAC 58.600 50.000 11.86 0.00 42.45 3.82
1651 2288 3.071167 GGTTCTCTACCAGAAACCACACT 59.929 47.826 11.86 0.00 42.45 3.55
1707 2344 8.824756 TCACAAGATAGAAATCCACTACTACT 57.175 34.615 0.00 0.00 31.98 2.57
1711 2348 9.357161 CAAGATAGAAATCCACTACTACTACCT 57.643 37.037 0.00 0.00 31.98 3.08
1714 2351 9.230122 GATAGAAATCCACTACTACTACCTACC 57.770 40.741 0.00 0.00 0.00 3.18
1715 2352 6.978261 AGAAATCCACTACTACTACCTACCA 58.022 40.000 0.00 0.00 0.00 3.25
1716 2353 7.593653 AGAAATCCACTACTACTACCTACCAT 58.406 38.462 0.00 0.00 0.00 3.55
1717 2354 7.724951 AGAAATCCACTACTACTACCTACCATC 59.275 40.741 0.00 0.00 0.00 3.51
1718 2355 5.981494 TCCACTACTACTACCTACCATCA 57.019 43.478 0.00 0.00 0.00 3.07
1719 2356 5.938279 TCCACTACTACTACCTACCATCAG 58.062 45.833 0.00 0.00 0.00 2.90
1720 2357 5.431073 TCCACTACTACTACCTACCATCAGT 59.569 44.000 0.00 0.00 0.00 3.41
1754 2391 4.589216 TGTTTGCATGAAAGAGAAAGGG 57.411 40.909 0.00 0.00 0.00 3.95
1755 2392 4.214310 TGTTTGCATGAAAGAGAAAGGGA 58.786 39.130 0.00 0.00 0.00 4.20
1756 2393 4.648762 TGTTTGCATGAAAGAGAAAGGGAA 59.351 37.500 0.00 0.00 0.00 3.97
1757 2394 5.128499 TGTTTGCATGAAAGAGAAAGGGAAA 59.872 36.000 0.00 0.00 0.00 3.13
1758 2395 5.458041 TTGCATGAAAGAGAAAGGGAAAG 57.542 39.130 0.00 0.00 0.00 2.62
1840 2477 2.755103 GTGTGAATCCACCAATTCCTCC 59.245 50.000 0.00 0.00 42.53 4.30
1841 2478 2.017049 GTGAATCCACCAATTCCTCCG 58.983 52.381 0.00 0.00 37.33 4.63
1842 2479 1.912731 TGAATCCACCAATTCCTCCGA 59.087 47.619 0.00 0.00 35.23 4.55
1843 2480 2.307392 TGAATCCACCAATTCCTCCGAA 59.693 45.455 0.00 0.00 35.23 4.30
1844 2481 2.717639 ATCCACCAATTCCTCCGAAG 57.282 50.000 0.00 0.00 0.00 3.79
1845 2482 1.651737 TCCACCAATTCCTCCGAAGA 58.348 50.000 0.00 0.00 0.00 2.87
1846 2483 1.982226 TCCACCAATTCCTCCGAAGAA 59.018 47.619 0.00 0.00 0.00 2.52
1850 2487 3.686726 CACCAATTCCTCCGAAGAAAGAG 59.313 47.826 0.00 0.00 0.00 2.85
1860 2497 3.084786 CCGAAGAAAGAGAAAGGCCAAT 58.915 45.455 5.01 0.00 0.00 3.16
1871 2508 3.766051 AGAAAGGCCAATCTGTCAATTCC 59.234 43.478 5.01 0.00 0.00 3.01
1877 2514 3.490419 GCCAATCTGTCAATTCCATGCTC 60.490 47.826 0.00 0.00 0.00 4.26
1887 2529 2.205022 TTCCATGCTCCTTTCAGTGG 57.795 50.000 0.00 0.00 0.00 4.00
1888 2530 1.067295 TCCATGCTCCTTTCAGTGGT 58.933 50.000 0.00 0.00 0.00 4.16
1890 2532 1.815003 CCATGCTCCTTTCAGTGGTTC 59.185 52.381 0.00 0.00 0.00 3.62
1891 2533 2.507484 CATGCTCCTTTCAGTGGTTCA 58.493 47.619 0.00 0.00 0.00 3.18
1892 2534 1.967319 TGCTCCTTTCAGTGGTTCAC 58.033 50.000 0.00 0.00 34.10 3.18
1893 2535 1.490490 TGCTCCTTTCAGTGGTTCACT 59.510 47.619 0.00 0.00 46.51 3.41
1894 2536 2.092429 TGCTCCTTTCAGTGGTTCACTT 60.092 45.455 0.00 0.00 42.59 3.16
1895 2537 2.550180 GCTCCTTTCAGTGGTTCACTTC 59.450 50.000 0.00 0.00 42.59 3.01
1896 2538 3.808728 CTCCTTTCAGTGGTTCACTTCA 58.191 45.455 0.00 0.00 42.59 3.02
1897 2539 3.541632 TCCTTTCAGTGGTTCACTTCAC 58.458 45.455 0.00 0.00 42.59 3.18
1898 2540 3.199946 TCCTTTCAGTGGTTCACTTCACT 59.800 43.478 0.00 0.00 42.59 3.41
1899 2541 3.947834 CCTTTCAGTGGTTCACTTCACTT 59.052 43.478 0.00 0.00 42.59 3.16
1900 2542 4.035675 CCTTTCAGTGGTTCACTTCACTTC 59.964 45.833 0.00 0.00 42.59 3.01
1901 2543 3.904800 TCAGTGGTTCACTTCACTTCA 57.095 42.857 0.00 0.00 42.59 3.02
1902 2544 3.531538 TCAGTGGTTCACTTCACTTCAC 58.468 45.455 0.00 0.00 42.59 3.18
1903 2545 2.614057 CAGTGGTTCACTTCACTTCACC 59.386 50.000 0.00 0.00 42.59 4.02
1904 2546 1.947456 GTGGTTCACTTCACTTCACCC 59.053 52.381 0.00 0.00 0.00 4.61
1905 2547 1.843851 TGGTTCACTTCACTTCACCCT 59.156 47.619 0.00 0.00 0.00 4.34
1906 2548 2.158813 TGGTTCACTTCACTTCACCCTC 60.159 50.000 0.00 0.00 0.00 4.30
1907 2549 2.495084 GTTCACTTCACTTCACCCTCC 58.505 52.381 0.00 0.00 0.00 4.30
1910 2552 1.142870 CACTTCACTTCACCCTCCCAA 59.857 52.381 0.00 0.00 0.00 4.12
1912 2554 1.421646 CTTCACTTCACCCTCCCAACT 59.578 52.381 0.00 0.00 0.00 3.16
1914 2556 1.059913 CACTTCACCCTCCCAACTCT 58.940 55.000 0.00 0.00 0.00 3.24
1915 2557 1.421646 CACTTCACCCTCCCAACTCTT 59.578 52.381 0.00 0.00 0.00 2.85
1916 2558 1.700186 ACTTCACCCTCCCAACTCTTC 59.300 52.381 0.00 0.00 0.00 2.87
1919 2561 0.036875 CACCCTCCCAACTCTTCCAC 59.963 60.000 0.00 0.00 0.00 4.02
1922 2564 1.003696 CCCTCCCAACTCTTCCACTTC 59.996 57.143 0.00 0.00 0.00 3.01
1923 2565 1.981495 CCTCCCAACTCTTCCACTTCT 59.019 52.381 0.00 0.00 0.00 2.85
1926 2568 4.068599 CTCCCAACTCTTCCACTTCTTTC 58.931 47.826 0.00 0.00 0.00 2.62
1930 2572 3.033368 ACTCTTCCACTTCTTTCTCGC 57.967 47.619 0.00 0.00 0.00 5.03
1951 2598 3.848726 CCCAATTCTTTCCGTTCCAATG 58.151 45.455 0.00 0.00 0.00 2.82
1967 2622 6.293407 CGTTCCAATGTATCTTTGTCAGTTGT 60.293 38.462 0.00 0.00 0.00 3.32
1970 2625 6.770303 TCCAATGTATCTTTGTCAGTTGTGAA 59.230 34.615 0.00 0.00 33.27 3.18
1973 2628 6.043327 TGTATCTTTGTCAGTTGTGAAACG 57.957 37.500 0.00 0.00 42.39 3.60
2002 2659 0.443869 CTCTTGGATTGCGTTCACGG 59.556 55.000 0.81 0.00 40.23 4.94
2003 2660 0.953471 TCTTGGATTGCGTTCACGGG 60.953 55.000 0.81 0.00 40.23 5.28
2004 2661 1.228003 TTGGATTGCGTTCACGGGT 60.228 52.632 0.81 0.00 40.23 5.28
2005 2662 1.511318 TTGGATTGCGTTCACGGGTG 61.511 55.000 0.81 0.00 40.23 4.61
2006 2663 1.964373 GGATTGCGTTCACGGGTGT 60.964 57.895 0.81 0.00 40.23 4.16
2007 2664 1.512156 GGATTGCGTTCACGGGTGTT 61.512 55.000 0.81 0.00 40.23 3.32
2009 2666 1.532007 GATTGCGTTCACGGGTGTTAA 59.468 47.619 0.81 0.00 40.23 2.01
2010 2667 0.938713 TTGCGTTCACGGGTGTTAAG 59.061 50.000 0.81 0.00 40.23 1.85
2012 2669 1.571215 GCGTTCACGGGTGTTAAGGG 61.571 60.000 0.81 0.00 40.23 3.95
2036 2703 1.001393 GTCGCCTTGGGAAATGGGA 60.001 57.895 0.00 0.00 0.00 4.37
2044 2711 1.680989 GGGAAATGGGACCGGTTGG 60.681 63.158 9.42 0.00 42.84 3.77
2133 2812 2.094854 CAGAGCTTTCTTGGCCATTCAC 60.095 50.000 6.09 0.00 0.00 3.18
2149 2828 2.189594 TCACCTTCAGCTTCATGTGG 57.810 50.000 0.00 0.00 0.00 4.17
2151 2830 1.808945 CACCTTCAGCTTCATGTGGAC 59.191 52.381 0.00 0.00 0.00 4.02
2155 2834 2.189594 TCAGCTTCATGTGGACCTTG 57.810 50.000 0.00 0.00 0.00 3.61
2158 2838 2.681848 CAGCTTCATGTGGACCTTGATC 59.318 50.000 0.00 0.00 0.00 2.92
2159 2839 2.019984 GCTTCATGTGGACCTTGATCC 58.980 52.381 0.00 0.00 39.45 3.36
2169 2849 1.229359 CCTTGATCCTGCCAGCCAT 59.771 57.895 0.00 0.00 0.00 4.40
2176 2856 0.107017 TCCTGCCAGCCATCTTTAGC 60.107 55.000 0.00 0.00 0.00 3.09
2196 2876 2.200067 CAGACTTTCTAGGCAGCATCG 58.800 52.381 0.00 0.00 0.00 3.84
2197 2877 1.137872 AGACTTTCTAGGCAGCATCGG 59.862 52.381 0.00 0.00 0.00 4.18
2198 2878 0.462759 ACTTTCTAGGCAGCATCGGC 60.463 55.000 0.00 0.00 41.61 5.54
2200 2880 0.181114 TTTCTAGGCAGCATCGGCAT 59.819 50.000 0.00 0.00 44.61 4.40
2202 2882 1.070275 CTAGGCAGCATCGGCATCA 59.930 57.895 0.00 0.00 44.61 3.07
2203 2883 0.321387 CTAGGCAGCATCGGCATCAT 60.321 55.000 0.00 0.00 44.61 2.45
2206 2886 1.580845 GGCAGCATCGGCATCATACC 61.581 60.000 0.00 0.00 44.61 2.73
2208 2888 1.154197 CAGCATCGGCATCATACCTG 58.846 55.000 0.00 0.00 44.61 4.00
2209 2889 0.604780 AGCATCGGCATCATACCTGC 60.605 55.000 0.00 0.00 44.61 4.85
2210 2890 0.886043 GCATCGGCATCATACCTGCA 60.886 55.000 0.00 0.00 41.47 4.41
2211 2891 1.817357 CATCGGCATCATACCTGCAT 58.183 50.000 0.00 0.00 41.47 3.96
2212 2892 1.736126 CATCGGCATCATACCTGCATC 59.264 52.381 0.00 0.00 41.47 3.91
2213 2893 0.758123 TCGGCATCATACCTGCATCA 59.242 50.000 0.00 0.00 41.47 3.07
2214 2894 1.140652 TCGGCATCATACCTGCATCAA 59.859 47.619 0.00 0.00 41.47 2.57
2215 2895 1.265095 CGGCATCATACCTGCATCAAC 59.735 52.381 0.00 0.00 41.47 3.18
2216 2896 2.300433 GGCATCATACCTGCATCAACA 58.700 47.619 0.00 0.00 41.47 3.33
2219 2899 3.281158 CATCATACCTGCATCAACACCA 58.719 45.455 0.00 0.00 0.00 4.17
2221 2901 2.305635 TCATACCTGCATCAACACCAGT 59.694 45.455 0.00 0.00 0.00 4.00
2222 2902 2.183478 TACCTGCATCAACACCAGTG 57.817 50.000 0.00 0.00 0.00 3.66
2225 2905 1.596603 CTGCATCAACACCAGTGTGA 58.403 50.000 3.80 5.05 45.76 3.58
2226 2906 1.265095 CTGCATCAACACCAGTGTGAC 59.735 52.381 3.80 0.00 45.76 3.67
2227 2907 0.235665 GCATCAACACCAGTGTGACG 59.764 55.000 3.80 0.00 45.76 4.35
2228 2908 1.864565 CATCAACACCAGTGTGACGA 58.135 50.000 3.80 2.60 45.76 4.20
2229 2909 2.209273 CATCAACACCAGTGTGACGAA 58.791 47.619 3.80 0.00 45.76 3.85
2230 2910 2.613026 TCAACACCAGTGTGACGAAT 57.387 45.000 3.80 0.00 45.76 3.34
2232 2912 2.869801 TCAACACCAGTGTGACGAATTC 59.130 45.455 3.80 0.00 45.76 2.17
2235 2915 1.195448 CACCAGTGTGACGAATTCTGC 59.805 52.381 3.52 0.00 45.76 4.26
2236 2916 1.202639 ACCAGTGTGACGAATTCTGCA 60.203 47.619 3.52 0.00 0.00 4.41
2237 2917 1.872952 CCAGTGTGACGAATTCTGCAA 59.127 47.619 3.52 0.00 0.00 4.08
2238 2918 2.096069 CCAGTGTGACGAATTCTGCAAG 60.096 50.000 3.52 0.00 0.00 4.01
2239 2919 2.545526 CAGTGTGACGAATTCTGCAAGT 59.454 45.455 3.52 0.00 33.76 3.16
2240 2920 3.740832 CAGTGTGACGAATTCTGCAAGTA 59.259 43.478 3.52 0.00 33.76 2.24
2241 2921 4.389992 CAGTGTGACGAATTCTGCAAGTAT 59.610 41.667 3.52 0.00 33.76 2.12
2242 2922 4.389992 AGTGTGACGAATTCTGCAAGTATG 59.610 41.667 3.52 0.00 33.76 2.39
2243 2923 4.152402 GTGTGACGAATTCTGCAAGTATGT 59.848 41.667 3.52 0.00 33.76 2.29
2244 2924 4.152223 TGTGACGAATTCTGCAAGTATGTG 59.848 41.667 3.52 0.00 33.76 3.21
2247 2927 3.436704 ACGAATTCTGCAAGTATGTGTGG 59.563 43.478 3.52 0.00 33.76 4.17
2248 2928 3.684305 CGAATTCTGCAAGTATGTGTGGA 59.316 43.478 3.52 0.00 33.76 4.02
2249 2929 4.333649 CGAATTCTGCAAGTATGTGTGGAT 59.666 41.667 3.52 0.00 33.76 3.41
2250 2930 5.571784 AATTCTGCAAGTATGTGTGGATG 57.428 39.130 0.00 0.00 33.76 3.51
2252 2932 2.086094 CTGCAAGTATGTGTGGATGCA 58.914 47.619 0.00 0.00 41.08 3.96
2253 2933 2.086094 TGCAAGTATGTGTGGATGCAG 58.914 47.619 0.00 0.00 38.73 4.41
2254 2934 1.202222 GCAAGTATGTGTGGATGCAGC 60.202 52.381 0.00 0.00 34.10 5.25
2255 2935 2.086094 CAAGTATGTGTGGATGCAGCA 58.914 47.619 3.51 0.00 0.00 4.41
2256 2936 2.686405 CAAGTATGTGTGGATGCAGCAT 59.314 45.455 7.91 7.91 0.00 3.79
2257 2937 2.294979 AGTATGTGTGGATGCAGCATG 58.705 47.619 14.22 0.00 40.87 4.06
2268 2948 4.883026 CAGCATGCTTGGCAGAAC 57.117 55.556 19.98 0.00 43.65 3.01
2269 2949 1.961378 CAGCATGCTTGGCAGAACA 59.039 52.632 19.98 0.00 43.65 3.18
2270 2950 0.388134 CAGCATGCTTGGCAGAACAC 60.388 55.000 19.98 0.00 43.65 3.32
2272 2952 1.951510 CATGCTTGGCAGAACACGT 59.048 52.632 0.00 0.00 43.65 4.49
2273 2953 0.110056 CATGCTTGGCAGAACACGTC 60.110 55.000 0.00 0.00 43.65 4.34
2274 2954 0.534877 ATGCTTGGCAGAACACGTCA 60.535 50.000 0.00 0.00 43.65 4.35
2275 2955 0.534877 TGCTTGGCAGAACACGTCAT 60.535 50.000 0.00 0.00 33.32 3.06
2276 2956 0.593128 GCTTGGCAGAACACGTCATT 59.407 50.000 0.00 0.00 0.00 2.57
2277 2957 1.804151 GCTTGGCAGAACACGTCATTA 59.196 47.619 0.00 0.00 0.00 1.90
2278 2958 2.159653 GCTTGGCAGAACACGTCATTAG 60.160 50.000 0.00 0.00 0.00 1.73
2279 2959 3.325870 CTTGGCAGAACACGTCATTAGA 58.674 45.455 0.00 0.00 0.00 2.10
2280 2960 2.683968 TGGCAGAACACGTCATTAGAC 58.316 47.619 0.00 0.00 41.46 2.59
2281 2961 2.036604 TGGCAGAACACGTCATTAGACA 59.963 45.455 0.00 0.00 45.23 3.41
2282 2962 3.064207 GGCAGAACACGTCATTAGACAA 58.936 45.455 0.00 0.00 45.23 3.18
2283 2963 3.120649 GGCAGAACACGTCATTAGACAAC 60.121 47.826 0.00 0.00 45.23 3.32
2285 2965 4.211374 GCAGAACACGTCATTAGACAACTT 59.789 41.667 0.00 0.00 45.23 2.66
2287 2967 5.462068 CAGAACACGTCATTAGACAACTTCA 59.538 40.000 0.00 0.00 45.23 3.02
2288 2968 6.146184 CAGAACACGTCATTAGACAACTTCAT 59.854 38.462 0.00 0.00 45.23 2.57
2289 2969 5.845985 ACACGTCATTAGACAACTTCATG 57.154 39.130 0.00 0.00 45.23 3.07
2290 2970 5.297547 ACACGTCATTAGACAACTTCATGT 58.702 37.500 0.00 0.00 45.23 3.21
2291 2971 5.177511 ACACGTCATTAGACAACTTCATGTG 59.822 40.000 0.00 0.00 45.23 3.21
2293 2973 4.690748 CGTCATTAGACAACTTCATGTGGT 59.309 41.667 0.00 0.00 45.23 4.16
2294 2974 5.179368 CGTCATTAGACAACTTCATGTGGTT 59.821 40.000 0.00 0.00 45.23 3.67
2295 2975 6.293407 CGTCATTAGACAACTTCATGTGGTTT 60.293 38.462 0.00 0.00 45.23 3.27
2296 2976 6.857964 GTCATTAGACAACTTCATGTGGTTTG 59.142 38.462 0.00 0.00 44.34 2.93
2298 2978 4.900635 AGACAACTTCATGTGGTTTGTC 57.099 40.909 17.14 17.14 31.84 3.18
2299 2979 3.632145 AGACAACTTCATGTGGTTTGTCC 59.368 43.478 19.36 9.17 31.84 4.02
2301 2981 2.692557 CAACTTCATGTGGTTTGTCCCA 59.307 45.455 0.00 0.00 34.77 4.37
2304 2984 0.539438 TCATGTGGTTTGTCCCAGCC 60.539 55.000 0.00 0.00 34.43 4.85
2305 2985 0.827089 CATGTGGTTTGTCCCAGCCA 60.827 55.000 0.00 0.00 34.43 4.75
2306 2986 0.105760 ATGTGGTTTGTCCCAGCCAA 60.106 50.000 0.00 0.00 34.43 4.52
2310 2990 0.673985 GGTTTGTCCCAGCCAACTTC 59.326 55.000 0.00 0.00 0.00 3.01
2311 2991 1.398692 GTTTGTCCCAGCCAACTTCA 58.601 50.000 0.00 0.00 0.00 3.02
2312 2992 1.963515 GTTTGTCCCAGCCAACTTCAT 59.036 47.619 0.00 0.00 0.00 2.57
2313 2993 1.619654 TTGTCCCAGCCAACTTCATG 58.380 50.000 0.00 0.00 0.00 3.07
2315 2995 0.883833 GTCCCAGCCAACTTCATGTG 59.116 55.000 0.00 0.00 0.00 3.21
2316 2996 0.251297 TCCCAGCCAACTTCATGTGG 60.251 55.000 0.00 0.00 0.00 4.17
2317 2997 1.588082 CCAGCCAACTTCATGTGGC 59.412 57.895 15.46 15.46 40.61 5.01
2318 2998 1.180456 CCAGCCAACTTCATGTGGCA 61.180 55.000 22.83 0.00 41.81 4.92
2319 2999 0.242825 CAGCCAACTTCATGTGGCAG 59.757 55.000 22.83 13.77 41.81 4.85
2320 3000 1.080298 GCCAACTTCATGTGGCAGC 60.080 57.895 17.70 1.17 40.29 5.25
2321 3001 1.808531 GCCAACTTCATGTGGCAGCA 61.809 55.000 17.70 0.00 40.29 4.41
2322 3002 0.892755 CCAACTTCATGTGGCAGCAT 59.107 50.000 0.00 0.00 0.00 3.79
2323 3003 1.135199 CCAACTTCATGTGGCAGCATC 60.135 52.381 0.00 0.00 0.00 3.91
2340 3020 2.879026 GCATCAGCATCATCATGTGTCT 59.121 45.455 0.00 0.00 41.58 3.41
2351 3031 2.825205 TCATGTGTCTGTGTCACACTG 58.175 47.619 9.90 9.15 46.26 3.66
2353 3033 0.901827 TGTGTCTGTGTCACACTGGT 59.098 50.000 14.28 0.00 43.93 4.00
2356 3036 1.552792 TGTCTGTGTCACACTGGTTGA 59.447 47.619 14.28 0.00 35.11 3.18
2364 3044 1.209261 TCACACTGGTTGAAGTCAGCA 59.791 47.619 0.00 0.00 34.57 4.41
2365 3045 2.158769 TCACACTGGTTGAAGTCAGCAT 60.159 45.455 0.00 0.00 34.57 3.79
2373 3053 0.397564 TGAAGTCAGCATCAGCACCA 59.602 50.000 0.00 0.00 45.49 4.17
2394 3074 2.361757 AGTCTGATTGGCTCATCTCTCG 59.638 50.000 0.00 0.00 32.10 4.04
2403 4528 1.957177 GCTCATCTCTCGGTATGGACA 59.043 52.381 0.00 0.00 0.00 4.02
2424 4549 2.096406 CATGCTTGGAACGCGTCG 59.904 61.111 14.44 0.00 0.00 5.12
2446 4571 2.122783 TCCCCCGTAAATTCAGCAAG 57.877 50.000 0.00 0.00 0.00 4.01
2450 4575 3.257127 CCCCCGTAAATTCAGCAAGAAAA 59.743 43.478 0.00 0.00 40.22 2.29
2451 4576 4.081697 CCCCCGTAAATTCAGCAAGAAAAT 60.082 41.667 0.00 0.00 40.22 1.82
2452 4577 5.102313 CCCCGTAAATTCAGCAAGAAAATC 58.898 41.667 0.00 0.00 40.22 2.17
2453 4578 4.793216 CCCGTAAATTCAGCAAGAAAATCG 59.207 41.667 0.00 0.82 40.22 3.34
2454 4579 5.391523 CCCGTAAATTCAGCAAGAAAATCGA 60.392 40.000 0.00 0.00 40.22 3.59
2458 4583 6.998258 AAATTCAGCAAGAAAATCGACAAG 57.002 33.333 0.00 0.00 40.22 3.16
2459 4584 5.695851 ATTCAGCAAGAAAATCGACAAGT 57.304 34.783 0.00 0.00 40.22 3.16
2460 4585 4.732285 TCAGCAAGAAAATCGACAAGTC 57.268 40.909 0.00 0.00 0.00 3.01
2461 4586 4.380531 TCAGCAAGAAAATCGACAAGTCT 58.619 39.130 0.00 0.00 0.00 3.24
2462 4587 4.449068 TCAGCAAGAAAATCGACAAGTCTC 59.551 41.667 0.00 0.00 0.00 3.36
2482 4607 1.670811 CCTTGCGAGTTCTGTGTGTTT 59.329 47.619 0.00 0.00 0.00 2.83
2496 4621 8.709646 GTTCTGTGTGTTTAGTAGAATACCAAG 58.290 37.037 0.00 0.00 44.47 3.61
2498 4623 8.644216 TCTGTGTGTTTAGTAGAATACCAAGAA 58.356 33.333 0.00 0.00 44.47 2.52
2511 4636 8.034058 AGAATACCAAGAAAAAGAATCAGTCG 57.966 34.615 0.00 0.00 0.00 4.18
2517 4642 4.703897 AGAAAAAGAATCAGTCGGTGTCA 58.296 39.130 0.00 0.00 0.00 3.58
2520 4645 5.828299 AAAAGAATCAGTCGGTGTCAAAA 57.172 34.783 0.00 0.00 0.00 2.44
2536 4661 5.798434 GTGTCAAAATATTTGTAACCTCGCC 59.202 40.000 0.39 0.00 0.00 5.54
2538 4663 6.016192 TGTCAAAATATTTGTAACCTCGCCAA 60.016 34.615 0.39 0.00 0.00 4.52
2540 4665 7.220108 GTCAAAATATTTGTAACCTCGCCAATC 59.780 37.037 0.39 0.00 0.00 2.67
2541 4666 5.418310 AATATTTGTAACCTCGCCAATCG 57.582 39.130 0.00 0.00 40.15 3.34
2542 4667 0.800012 TTTGTAACCTCGCCAATCGC 59.200 50.000 0.00 0.00 38.27 4.58
2543 4668 0.320858 TTGTAACCTCGCCAATCGCA 60.321 50.000 0.00 0.00 37.30 5.10
2544 4669 1.017177 TGTAACCTCGCCAATCGCAC 61.017 55.000 0.00 0.00 37.30 5.34
2653 4809 3.586100 ATATGGCCGAAACAACAAACC 57.414 42.857 0.00 0.00 0.00 3.27
2668 4824 1.336755 CAAACCCAAACTTCTGTCCGG 59.663 52.381 0.00 0.00 0.00 5.14
2669 4825 0.549469 AACCCAAACTTCTGTCCGGT 59.451 50.000 0.00 0.00 0.00 5.28
2674 4830 2.223711 CCAAACTTCTGTCCGGTTTTGG 60.224 50.000 0.00 6.77 31.87 3.28
2676 4832 2.430248 ACTTCTGTCCGGTTTTGGTT 57.570 45.000 0.00 0.00 0.00 3.67
2678 4834 2.092592 ACTTCTGTCCGGTTTTGGTTCT 60.093 45.455 0.00 0.00 0.00 3.01
2680 4836 3.116079 TCTGTCCGGTTTTGGTTCTAC 57.884 47.619 0.00 0.00 0.00 2.59
2681 4837 2.148768 CTGTCCGGTTTTGGTTCTACC 58.851 52.381 0.00 0.00 39.22 3.18
2688 4844 3.671716 GGTTTTGGTTCTACCGAGATGT 58.328 45.455 0.00 0.00 42.58 3.06
2689 4845 4.824289 GGTTTTGGTTCTACCGAGATGTA 58.176 43.478 0.00 0.00 42.58 2.29
2690 4846 5.240121 GGTTTTGGTTCTACCGAGATGTAA 58.760 41.667 0.00 0.00 42.58 2.41
2691 4847 5.350640 GGTTTTGGTTCTACCGAGATGTAAG 59.649 44.000 0.00 0.00 42.58 2.34
2692 4848 5.733620 TTTGGTTCTACCGAGATGTAAGT 57.266 39.130 0.00 0.00 42.58 2.24
2693 4849 6.839124 TTTGGTTCTACCGAGATGTAAGTA 57.161 37.500 0.00 0.00 42.58 2.24
2694 4850 6.839124 TTGGTTCTACCGAGATGTAAGTAA 57.161 37.500 0.00 0.00 42.58 2.24
2695 4851 6.839124 TGGTTCTACCGAGATGTAAGTAAA 57.161 37.500 0.00 0.00 42.58 2.01
2696 4852 6.624423 TGGTTCTACCGAGATGTAAGTAAAC 58.376 40.000 0.00 0.00 42.58 2.01
2715 4871 3.974871 ACGCGTTGTAGTTGGATTTTT 57.025 38.095 5.58 0.00 0.00 1.94
2727 4883 8.307483 TGTAGTTGGATTTTTGAACTTGAACAA 58.693 29.630 0.00 0.00 32.27 2.83
2729 4885 8.200364 AGTTGGATTTTTGAACTTGAACAATG 57.800 30.769 0.00 0.00 0.00 2.82
2760 4924 8.885494 TTTTTGATTTTGGAATGAGGTAACAG 57.115 30.769 0.00 0.00 41.41 3.16
2789 4965 8.497554 TGTCTGAATTGCATTTTATTTTTCTGC 58.502 29.630 0.00 0.00 0.00 4.26
3104 5284 4.308458 CACGGGCCCACACTTCGA 62.308 66.667 24.92 0.00 0.00 3.71
3579 5759 1.376037 CACGGAGGGGTTCTTGCTC 60.376 63.158 0.00 0.00 0.00 4.26
3603 5783 1.065928 GTCGGAGATCGCGGATGTT 59.934 57.895 6.13 0.00 40.67 2.71
3607 5787 0.179111 GGAGATCGCGGATGTTGTCA 60.179 55.000 6.13 0.00 0.00 3.58
3972 6155 3.155861 ACCGACGACAACCACCCA 61.156 61.111 0.00 0.00 0.00 4.51
3975 6158 1.663702 CGACGACAACCACCCACTC 60.664 63.158 0.00 0.00 0.00 3.51
4376 6568 1.002033 CTTGTCAAGCACTGCCTTCAC 60.002 52.381 0.00 0.00 0.00 3.18
4390 6582 4.695396 TGCCTTCACTAACTTGTTCGTTA 58.305 39.130 0.00 0.00 0.00 3.18
4454 6646 0.035152 AGGCCGATGAAGATTGTGCA 60.035 50.000 0.00 0.00 0.00 4.57
4486 6678 8.762481 ATAACCAAGGGTTTGAAATATAGTCC 57.238 34.615 5.90 0.00 44.33 3.85
4553 6748 8.465273 AAATATATTTTGACCTTCCACTAGCC 57.535 34.615 4.81 0.00 0.00 3.93
4577 6772 1.971167 GCCCATGAGTTGCAACGGA 60.971 57.895 23.21 14.30 0.00 4.69
4583 6778 3.190327 CCATGAGTTGCAACGGAATAACA 59.810 43.478 23.21 14.98 0.00 2.41
4652 6847 6.584184 CGTATTTGAATATTTGTGCACCAACA 59.416 34.615 15.69 0.00 31.20 3.33
4654 6849 5.781210 TTGAATATTTGTGCACCAACAGA 57.219 34.783 15.69 0.00 31.20 3.41
4663 6858 3.726517 ACCAACAGACGCGCATGC 61.727 61.111 5.73 7.91 37.91 4.06
4679 7000 1.066454 CATGCGGATGTAGGACACGTA 59.934 52.381 9.01 0.00 0.00 3.57
4696 7017 4.625742 ACACGTACATTCTAACATGCTCAC 59.374 41.667 0.00 0.00 0.00 3.51
4697 7018 4.625311 CACGTACATTCTAACATGCTCACA 59.375 41.667 0.00 0.00 0.00 3.58
4698 7019 5.120053 CACGTACATTCTAACATGCTCACAA 59.880 40.000 0.00 0.00 0.00 3.33
4704 7025 8.510243 ACATTCTAACATGCTCACAATGAATA 57.490 30.769 10.37 0.00 0.00 1.75
4705 7026 8.618677 ACATTCTAACATGCTCACAATGAATAG 58.381 33.333 10.37 0.00 0.00 1.73
4783 7109 6.467677 TGTATGAGAAGAAAAGGAGAAGGTG 58.532 40.000 0.00 0.00 0.00 4.00
4815 7146 2.247358 GGATGAAAAACTGAAGGGCCA 58.753 47.619 6.18 0.00 0.00 5.36
4816 7147 2.632512 GGATGAAAAACTGAAGGGCCAA 59.367 45.455 6.18 0.00 0.00 4.52
4817 7148 3.554960 GGATGAAAAACTGAAGGGCCAAC 60.555 47.826 6.18 0.00 0.00 3.77
4828 7677 2.359967 GGGCCAACGTCCTAGAGCT 61.360 63.158 4.39 0.00 0.00 4.09
4841 7690 2.607526 CCTAGAGCTGCAGTCATCATCG 60.608 54.545 16.64 4.30 0.00 3.84
4879 7728 6.663944 AGATCTAATTAAAGCAACCGACAC 57.336 37.500 0.00 0.00 0.00 3.67
4887 7736 1.981256 AGCAACCGACACCAAATCTT 58.019 45.000 0.00 0.00 0.00 2.40
4895 7744 2.083774 GACACCAAATCTTGCCATCGA 58.916 47.619 0.00 0.00 0.00 3.59
4932 7781 1.591594 CCTAACATCGCGACCGCAT 60.592 57.895 12.93 1.01 42.06 4.73
4955 7804 1.887198 AGACGGTAGGAATCTATGCCG 59.113 52.381 12.08 12.08 39.55 5.69
4982 7834 1.794437 CGTCAAGTACGTCTAGCTGGC 60.794 57.143 0.00 0.00 46.72 4.85
4997 7849 1.187087 CTGGCCGAACTCTAAGAGGT 58.813 55.000 0.00 0.00 33.35 3.85
5041 7896 4.278170 TGAAAAAGAAGCAACATCATCCGT 59.722 37.500 0.00 0.00 0.00 4.69
5158 8013 0.462047 GTAACTGGAGTGGGGATGCG 60.462 60.000 0.00 0.00 0.00 4.73
5175 8030 3.275617 TGCGTACTTTATTGGCTCCAT 57.724 42.857 0.00 0.00 0.00 3.41
5182 8037 3.245229 ACTTTATTGGCTCCATCCACACA 60.245 43.478 0.00 0.00 35.50 3.72
5215 8070 8.807948 ATACAAGTGGCTTAGTGATACAATTT 57.192 30.769 0.00 0.00 0.00 1.82
5216 8071 6.913170 ACAAGTGGCTTAGTGATACAATTTG 58.087 36.000 0.00 0.00 0.00 2.32
5245 8100 4.270245 TGTCTATCATGTGTTGTCAGCA 57.730 40.909 0.00 0.00 0.00 4.41
5282 8137 4.985538 TGACTCTAATTCCCTCGAGAAC 57.014 45.455 15.71 0.00 0.00 3.01
5288 8143 5.888105 TCTAATTCCCTCGAGAACGTTTAG 58.112 41.667 15.71 13.34 40.69 1.85
5300 8155 5.197682 AGAACGTTTAGTACTCAAGCACT 57.802 39.130 0.46 0.00 0.00 4.40
5370 8228 7.825761 TGTTTGTAGTTTAGATAAAGGCTACCC 59.174 37.037 0.00 0.00 31.65 3.69
5392 8250 6.156519 CCCTTTTATTTGTGTTCCTAGCAAC 58.843 40.000 0.00 0.00 0.00 4.17
5398 8256 9.781633 TTTATTTGTGTTCCTAGCAACTTACTA 57.218 29.630 0.00 0.00 0.00 1.82
5413 8271 9.163899 AGCAACTTACTAAAGTAGGCTATTTTC 57.836 33.333 17.00 2.05 46.40 2.29
5421 8279 9.148104 ACTAAAGTAGGCTATTTTCAAACTACG 57.852 33.333 17.00 2.43 36.74 3.51
5429 8287 2.642154 TTTCAAACTACGGCTTGGGA 57.358 45.000 0.00 0.00 0.00 4.37
5444 8302 4.380841 CTTGGGAGCATACGTAACTACA 57.619 45.455 11.97 7.36 0.00 2.74
5455 8313 6.305877 GCATACGTAACTACATGAGTGATAGC 59.694 42.308 0.00 0.00 38.87 2.97
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.738521 CACCCCGCAGTTCAGTCG 60.739 66.667 0.00 0.00 0.00 4.18
1 2 2.358737 CCACCCCGCAGTTCAGTC 60.359 66.667 0.00 0.00 0.00 3.51
2 3 3.953775 CCCACCCCGCAGTTCAGT 61.954 66.667 0.00 0.00 0.00 3.41
3 4 3.491598 AACCCACCCCGCAGTTCAG 62.492 63.158 0.00 0.00 0.00 3.02
4 5 3.494254 AACCCACCCCGCAGTTCA 61.494 61.111 0.00 0.00 0.00 3.18
5 6 2.983592 CAACCCACCCCGCAGTTC 60.984 66.667 0.00 0.00 0.00 3.01
6 7 3.816090 ACAACCCACCCCGCAGTT 61.816 61.111 0.00 0.00 0.00 3.16
7 8 4.579384 CACAACCCACCCCGCAGT 62.579 66.667 0.00 0.00 0.00 4.40
13 14 3.494736 TTACCCGCACAACCCACCC 62.495 63.158 0.00 0.00 0.00 4.61
14 15 1.969589 CTTACCCGCACAACCCACC 60.970 63.158 0.00 0.00 0.00 4.61
15 16 1.228033 ACTTACCCGCACAACCCAC 60.228 57.895 0.00 0.00 0.00 4.61
16 17 1.228003 CACTTACCCGCACAACCCA 60.228 57.895 0.00 0.00 0.00 4.51
17 18 0.953960 CTCACTTACCCGCACAACCC 60.954 60.000 0.00 0.00 0.00 4.11
18 19 0.953960 CCTCACTTACCCGCACAACC 60.954 60.000 0.00 0.00 0.00 3.77
19 20 0.953960 CCCTCACTTACCCGCACAAC 60.954 60.000 0.00 0.00 0.00 3.32
20 21 1.373435 CCCTCACTTACCCGCACAA 59.627 57.895 0.00 0.00 0.00 3.33
21 22 2.589157 CCCCTCACTTACCCGCACA 61.589 63.158 0.00 0.00 0.00 4.57
22 23 2.240162 CTCCCCTCACTTACCCGCAC 62.240 65.000 0.00 0.00 0.00 5.34
23 24 1.987855 CTCCCCTCACTTACCCGCA 60.988 63.158 0.00 0.00 0.00 5.69
24 25 2.732619 CCTCCCCTCACTTACCCGC 61.733 68.421 0.00 0.00 0.00 6.13
25 26 1.001248 TCCTCCCCTCACTTACCCG 59.999 63.158 0.00 0.00 0.00 5.28
26 27 0.042881 ACTCCTCCCCTCACTTACCC 59.957 60.000 0.00 0.00 0.00 3.69
27 28 2.842645 TACTCCTCCCCTCACTTACC 57.157 55.000 0.00 0.00 0.00 2.85
272 273 3.708734 GACGCCCGTCCGTTGTTG 61.709 66.667 9.53 0.00 42.24 3.33
296 297 4.704833 TGGAACTGCTCTGCGCCC 62.705 66.667 4.18 0.00 38.05 6.13
297 298 3.426568 GTGGAACTGCTCTGCGCC 61.427 66.667 4.18 0.00 38.05 6.53
298 299 3.426568 GGTGGAACTGCTCTGCGC 61.427 66.667 0.00 0.00 36.74 6.09
299 300 3.114616 CGGTGGAACTGCTCTGCG 61.115 66.667 0.00 0.00 35.75 5.18
324 325 4.680237 TCAGCGGTTGCCACTCGG 62.680 66.667 0.00 0.00 44.31 4.63
325 326 3.414700 GTCAGCGGTTGCCACTCG 61.415 66.667 0.00 0.00 44.31 4.18
326 327 3.050275 GGTCAGCGGTTGCCACTC 61.050 66.667 0.00 0.00 44.31 3.51
327 328 4.988598 CGGTCAGCGGTTGCCACT 62.989 66.667 5.26 0.00 44.31 4.00
357 358 4.728102 TAGTTCGCCCACACGCCG 62.728 66.667 0.00 0.00 0.00 6.46
358 359 2.125269 ATAGTTCGCCCACACGCC 60.125 61.111 0.00 0.00 0.00 5.68
359 360 1.693083 GACATAGTTCGCCCACACGC 61.693 60.000 0.00 0.00 0.00 5.34
360 361 0.389296 TGACATAGTTCGCCCACACG 60.389 55.000 0.00 0.00 0.00 4.49
361 362 1.076332 GTGACATAGTTCGCCCACAC 58.924 55.000 0.00 0.00 0.00 3.82
362 363 0.682292 TGTGACATAGTTCGCCCACA 59.318 50.000 0.00 0.00 32.87 4.17
363 364 1.076332 GTGTGACATAGTTCGCCCAC 58.924 55.000 0.00 0.00 0.00 4.61
364 365 0.682292 TGTGTGACATAGTTCGCCCA 59.318 50.000 0.00 0.00 0.00 5.36
365 366 1.076332 GTGTGTGACATAGTTCGCCC 58.924 55.000 0.00 0.00 0.00 6.13
366 367 1.076332 GGTGTGTGACATAGTTCGCC 58.924 55.000 0.00 0.00 0.00 5.54
367 368 1.459592 GTGGTGTGTGACATAGTTCGC 59.540 52.381 0.00 0.00 0.00 4.70
368 369 2.475111 GTGTGGTGTGTGACATAGTTCG 59.525 50.000 0.00 0.00 0.00 3.95
369 370 3.247648 GTGTGTGGTGTGTGACATAGTTC 59.752 47.826 0.00 0.00 0.00 3.01
370 371 3.202906 GTGTGTGGTGTGTGACATAGTT 58.797 45.455 0.00 0.00 0.00 2.24
371 372 2.801699 CGTGTGTGGTGTGTGACATAGT 60.802 50.000 0.00 0.00 0.00 2.12
372 373 1.792367 CGTGTGTGGTGTGTGACATAG 59.208 52.381 0.00 0.00 0.00 2.23
373 374 1.859383 CGTGTGTGGTGTGTGACATA 58.141 50.000 0.00 0.00 0.00 2.29
374 375 1.436195 GCGTGTGTGGTGTGTGACAT 61.436 55.000 0.00 0.00 0.00 3.06
375 376 2.103647 GCGTGTGTGGTGTGTGACA 61.104 57.895 0.00 0.00 0.00 3.58
376 377 2.707039 GCGTGTGTGGTGTGTGAC 59.293 61.111 0.00 0.00 0.00 3.67
377 378 2.888051 CGCGTGTGTGGTGTGTGA 60.888 61.111 0.00 0.00 0.00 3.58
378 379 4.589700 GCGCGTGTGTGGTGTGTG 62.590 66.667 8.43 0.00 0.00 3.82
381 382 4.849310 AAGGCGCGTGTGTGGTGT 62.849 61.111 8.43 0.00 0.00 4.16
382 383 4.312231 CAAGGCGCGTGTGTGGTG 62.312 66.667 8.43 0.00 0.00 4.17
383 384 4.849310 ACAAGGCGCGTGTGTGGT 62.849 61.111 13.89 0.87 0.00 4.16
384 385 4.012895 GACAAGGCGCGTGTGTGG 62.013 66.667 18.80 2.76 0.00 4.17
385 386 4.012895 GGACAAGGCGCGTGTGTG 62.013 66.667 18.80 9.21 0.00 3.82
386 387 2.167398 ATAGGACAAGGCGCGTGTGT 62.167 55.000 18.80 16.48 0.00 3.72
387 388 1.447838 ATAGGACAAGGCGCGTGTG 60.448 57.895 18.80 13.72 0.00 3.82
388 389 1.447838 CATAGGACAAGGCGCGTGT 60.448 57.895 14.47 14.47 0.00 4.49
389 390 1.447838 ACATAGGACAAGGCGCGTG 60.448 57.895 8.43 5.67 0.00 5.34
390 391 1.447838 CACATAGGACAAGGCGCGT 60.448 57.895 8.43 0.00 0.00 6.01
391 392 2.173669 CCACATAGGACAAGGCGCG 61.174 63.158 0.00 0.00 41.22 6.86
392 393 2.472909 GCCACATAGGACAAGGCGC 61.473 63.158 0.00 0.00 41.22 6.53
393 394 3.813596 GCCACATAGGACAAGGCG 58.186 61.111 0.00 0.00 41.22 5.52
394 395 2.222027 GTATGCCACATAGGACAAGGC 58.778 52.381 0.00 0.00 45.41 4.35
395 396 3.558931 TGTATGCCACATAGGACAAGG 57.441 47.619 0.00 0.00 41.22 3.61
396 397 5.895636 TTTTGTATGCCACATAGGACAAG 57.104 39.130 0.00 0.00 41.22 3.16
397 398 5.948758 TGATTTTGTATGCCACATAGGACAA 59.051 36.000 0.00 0.00 41.22 3.18
398 399 5.504853 TGATTTTGTATGCCACATAGGACA 58.495 37.500 0.00 0.00 41.22 4.02
399 400 5.506317 GCTGATTTTGTATGCCACATAGGAC 60.506 44.000 0.00 0.00 41.22 3.85
400 401 4.580167 GCTGATTTTGTATGCCACATAGGA 59.420 41.667 0.00 0.00 41.22 2.94
401 402 4.261741 GGCTGATTTTGTATGCCACATAGG 60.262 45.833 0.00 0.00 42.79 2.57
402 403 4.863491 GGCTGATTTTGTATGCCACATAG 58.137 43.478 0.00 0.00 42.79 2.23
403 404 4.916983 GGCTGATTTTGTATGCCACATA 57.083 40.909 0.00 0.00 42.79 2.29
404 405 3.806625 GGCTGATTTTGTATGCCACAT 57.193 42.857 0.00 0.00 42.79 3.21
408 409 4.314121 TGTTTTGGCTGATTTTGTATGCC 58.686 39.130 0.00 0.00 43.49 4.40
409 410 5.671825 GCATGTTTTGGCTGATTTTGTATGC 60.672 40.000 0.00 0.00 0.00 3.14
410 411 5.860641 GCATGTTTTGGCTGATTTTGTATG 58.139 37.500 0.00 0.00 0.00 2.39
423 424 2.988493 CACGAATCTTGGCATGTTTTGG 59.012 45.455 13.14 7.42 0.00 3.28
424 425 3.641648 ACACGAATCTTGGCATGTTTTG 58.358 40.909 8.95 8.95 0.00 2.44
425 426 4.759693 TCTACACGAATCTTGGCATGTTTT 59.240 37.500 0.00 0.00 0.00 2.43
426 427 4.323417 TCTACACGAATCTTGGCATGTTT 58.677 39.130 0.00 0.00 0.00 2.83
427 428 3.935203 CTCTACACGAATCTTGGCATGTT 59.065 43.478 0.00 0.00 0.00 2.71
428 429 3.195610 TCTCTACACGAATCTTGGCATGT 59.804 43.478 0.00 0.00 0.00 3.21
429 430 3.553511 GTCTCTACACGAATCTTGGCATG 59.446 47.826 0.00 0.00 0.00 4.06
430 431 3.449018 AGTCTCTACACGAATCTTGGCAT 59.551 43.478 0.00 0.00 0.00 4.40
431 432 2.826128 AGTCTCTACACGAATCTTGGCA 59.174 45.455 0.00 0.00 0.00 4.92
432 433 3.182967 CAGTCTCTACACGAATCTTGGC 58.817 50.000 0.00 0.00 0.00 4.52
433 434 3.119316 AGCAGTCTCTACACGAATCTTGG 60.119 47.826 0.00 0.00 0.00 3.61
434 435 3.856521 CAGCAGTCTCTACACGAATCTTG 59.143 47.826 0.00 0.00 0.00 3.02
435 436 3.119316 CCAGCAGTCTCTACACGAATCTT 60.119 47.826 0.00 0.00 0.00 2.40
436 437 2.425312 CCAGCAGTCTCTACACGAATCT 59.575 50.000 0.00 0.00 0.00 2.40
437 438 2.423892 TCCAGCAGTCTCTACACGAATC 59.576 50.000 0.00 0.00 0.00 2.52
438 439 2.164624 GTCCAGCAGTCTCTACACGAAT 59.835 50.000 0.00 0.00 0.00 3.34
439 440 1.540267 GTCCAGCAGTCTCTACACGAA 59.460 52.381 0.00 0.00 0.00 3.85
440 441 1.166129 GTCCAGCAGTCTCTACACGA 58.834 55.000 0.00 0.00 0.00 4.35
441 442 0.179187 CGTCCAGCAGTCTCTACACG 60.179 60.000 0.00 0.00 0.00 4.49
442 443 1.135632 GTCGTCCAGCAGTCTCTACAC 60.136 57.143 0.00 0.00 0.00 2.90
443 444 1.166129 GTCGTCCAGCAGTCTCTACA 58.834 55.000 0.00 0.00 0.00 2.74
444 445 0.097325 CGTCGTCCAGCAGTCTCTAC 59.903 60.000 0.00 0.00 0.00 2.59
445 446 0.036671 TCGTCGTCCAGCAGTCTCTA 60.037 55.000 0.00 0.00 0.00 2.43
446 447 0.678366 ATCGTCGTCCAGCAGTCTCT 60.678 55.000 0.00 0.00 0.00 3.10
447 448 0.524392 CATCGTCGTCCAGCAGTCTC 60.524 60.000 0.00 0.00 0.00 3.36
448 449 0.960861 TCATCGTCGTCCAGCAGTCT 60.961 55.000 0.00 0.00 0.00 3.24
449 450 0.109272 TTCATCGTCGTCCAGCAGTC 60.109 55.000 0.00 0.00 0.00 3.51
450 451 0.109086 CTTCATCGTCGTCCAGCAGT 60.109 55.000 0.00 0.00 0.00 4.40
451 452 0.803768 CCTTCATCGTCGTCCAGCAG 60.804 60.000 0.00 0.00 0.00 4.24
452 453 1.215382 CCTTCATCGTCGTCCAGCA 59.785 57.895 0.00 0.00 0.00 4.41
453 454 2.167861 GCCTTCATCGTCGTCCAGC 61.168 63.158 0.00 0.00 0.00 4.85
454 455 1.874019 CGCCTTCATCGTCGTCCAG 60.874 63.158 0.00 0.00 0.00 3.86
455 456 2.180769 CGCCTTCATCGTCGTCCA 59.819 61.111 0.00 0.00 0.00 4.02
456 457 2.158959 CACGCCTTCATCGTCGTCC 61.159 63.158 0.00 0.00 38.19 4.79
457 458 1.443872 ACACGCCTTCATCGTCGTC 60.444 57.895 0.00 0.00 38.19 4.20
458 459 1.733041 CACACGCCTTCATCGTCGT 60.733 57.895 0.00 0.00 38.19 4.34
459 460 1.443702 TCACACGCCTTCATCGTCG 60.444 57.895 0.00 0.00 38.19 5.12
460 461 0.388649 AGTCACACGCCTTCATCGTC 60.389 55.000 0.00 0.00 38.19 4.20
461 462 0.667487 CAGTCACACGCCTTCATCGT 60.667 55.000 0.00 0.00 41.28 3.73
462 463 0.388520 TCAGTCACACGCCTTCATCG 60.389 55.000 0.00 0.00 0.00 3.84
463 464 1.067565 TCTCAGTCACACGCCTTCATC 60.068 52.381 0.00 0.00 0.00 2.92
464 465 0.969149 TCTCAGTCACACGCCTTCAT 59.031 50.000 0.00 0.00 0.00 2.57
465 466 0.969149 ATCTCAGTCACACGCCTTCA 59.031 50.000 0.00 0.00 0.00 3.02
466 467 1.354040 CATCTCAGTCACACGCCTTC 58.646 55.000 0.00 0.00 0.00 3.46
467 468 0.671781 GCATCTCAGTCACACGCCTT 60.672 55.000 0.00 0.00 0.00 4.35
468 469 1.079543 GCATCTCAGTCACACGCCT 60.080 57.895 0.00 0.00 0.00 5.52
469 470 2.103042 GGCATCTCAGTCACACGCC 61.103 63.158 0.00 0.00 0.00 5.68
470 471 0.173481 TAGGCATCTCAGTCACACGC 59.827 55.000 0.00 0.00 0.00 5.34
471 472 2.263077 GTTAGGCATCTCAGTCACACG 58.737 52.381 0.00 0.00 0.00 4.49
472 473 2.263077 CGTTAGGCATCTCAGTCACAC 58.737 52.381 0.00 0.00 0.00 3.82
473 474 1.404181 GCGTTAGGCATCTCAGTCACA 60.404 52.381 0.00 0.00 42.87 3.58
474 475 1.281899 GCGTTAGGCATCTCAGTCAC 58.718 55.000 0.00 0.00 42.87 3.67
475 476 0.175760 GGCGTTAGGCATCTCAGTCA 59.824 55.000 0.00 0.00 46.16 3.41
476 477 0.530870 GGGCGTTAGGCATCTCAGTC 60.531 60.000 0.00 0.00 46.16 3.51
477 478 1.264749 TGGGCGTTAGGCATCTCAGT 61.265 55.000 0.00 0.00 46.16 3.41
478 479 0.811616 GTGGGCGTTAGGCATCTCAG 60.812 60.000 0.00 0.00 46.16 3.35
479 480 1.220749 GTGGGCGTTAGGCATCTCA 59.779 57.895 0.00 0.00 46.16 3.27
480 481 1.090052 GTGTGGGCGTTAGGCATCTC 61.090 60.000 0.00 0.00 46.16 2.75
481 482 1.078426 GTGTGGGCGTTAGGCATCT 60.078 57.895 0.00 0.00 46.16 2.90
482 483 0.748005 ATGTGTGGGCGTTAGGCATC 60.748 55.000 0.00 0.00 46.16 3.91
483 484 1.031571 CATGTGTGGGCGTTAGGCAT 61.032 55.000 0.00 0.00 46.16 4.40
484 485 1.673993 CATGTGTGGGCGTTAGGCA 60.674 57.895 0.00 0.00 46.16 4.75
485 486 1.674322 ACATGTGTGGGCGTTAGGC 60.674 57.895 0.00 0.00 42.96 3.93
486 487 0.321210 TCACATGTGTGGGCGTTAGG 60.321 55.000 24.63 0.00 45.65 2.69
487 488 1.078709 CTCACATGTGTGGGCGTTAG 58.921 55.000 24.63 8.95 45.65 2.34
488 489 3.225272 CTCACATGTGTGGGCGTTA 57.775 52.632 24.63 2.63 45.65 3.18
489 490 4.063529 CTCACATGTGTGGGCGTT 57.936 55.556 24.63 0.00 45.65 4.84
494 495 1.870402 TGTTAACGCTCACATGTGTGG 59.130 47.619 24.63 18.61 45.65 4.17
495 496 3.811722 ATGTTAACGCTCACATGTGTG 57.188 42.857 24.63 22.64 46.91 3.82
496 497 4.320202 GGAAATGTTAACGCTCACATGTGT 60.320 41.667 24.63 8.38 33.76 3.72
497 498 4.158384 GGAAATGTTAACGCTCACATGTG 58.842 43.478 20.18 20.18 33.76 3.21
498 499 3.120338 CGGAAATGTTAACGCTCACATGT 60.120 43.478 0.26 0.00 33.76 3.21
499 500 3.124466 TCGGAAATGTTAACGCTCACATG 59.876 43.478 0.26 0.00 33.76 3.21
500 501 3.331150 TCGGAAATGTTAACGCTCACAT 58.669 40.909 0.26 0.00 35.00 3.21
501 502 2.756829 TCGGAAATGTTAACGCTCACA 58.243 42.857 0.26 0.00 0.00 3.58
502 503 3.799137 TTCGGAAATGTTAACGCTCAC 57.201 42.857 0.26 0.00 0.00 3.51
503 504 6.483385 TTTATTCGGAAATGTTAACGCTCA 57.517 33.333 0.26 0.00 0.00 4.26
504 505 7.964545 AATTTATTCGGAAATGTTAACGCTC 57.035 32.000 0.26 0.00 0.00 5.03
505 506 7.642586 GCTAATTTATTCGGAAATGTTAACGCT 59.357 33.333 0.26 0.00 0.00 5.07
506 507 7.642586 AGCTAATTTATTCGGAAATGTTAACGC 59.357 33.333 0.26 0.00 0.00 4.84
511 512 8.837389 GGACTAGCTAATTTATTCGGAAATGTT 58.163 33.333 0.00 0.00 0.00 2.71
512 513 7.444487 GGGACTAGCTAATTTATTCGGAAATGT 59.556 37.037 0.00 0.00 0.00 2.71
513 514 7.094762 GGGGACTAGCTAATTTATTCGGAAATG 60.095 40.741 0.00 0.00 0.00 2.32
514 515 6.940867 GGGGACTAGCTAATTTATTCGGAAAT 59.059 38.462 0.00 0.00 0.00 2.17
515 516 6.126710 TGGGGACTAGCTAATTTATTCGGAAA 60.127 38.462 0.00 0.00 0.00 3.13
516 517 5.367352 TGGGGACTAGCTAATTTATTCGGAA 59.633 40.000 0.00 0.00 0.00 4.30
517 518 4.903049 TGGGGACTAGCTAATTTATTCGGA 59.097 41.667 0.00 0.00 0.00 4.55
518 519 5.223449 TGGGGACTAGCTAATTTATTCGG 57.777 43.478 0.00 0.00 0.00 4.30
519 520 6.231211 ACATGGGGACTAGCTAATTTATTCG 58.769 40.000 0.00 0.00 0.00 3.34
520 521 7.224297 TGACATGGGGACTAGCTAATTTATTC 58.776 38.462 0.00 0.00 0.00 1.75
521 522 7.149202 TGACATGGGGACTAGCTAATTTATT 57.851 36.000 0.00 0.00 0.00 1.40
522 523 6.763715 TGACATGGGGACTAGCTAATTTAT 57.236 37.500 0.00 0.00 0.00 1.40
523 524 6.763715 ATGACATGGGGACTAGCTAATTTA 57.236 37.500 0.00 0.00 0.00 1.40
524 525 5.653255 ATGACATGGGGACTAGCTAATTT 57.347 39.130 0.00 0.00 0.00 1.82
525 526 5.456763 GGAATGACATGGGGACTAGCTAATT 60.457 44.000 0.00 0.00 0.00 1.40
552 553 1.571919 AGCCACGCGAATCATTCTAC 58.428 50.000 15.93 0.00 0.00 2.59
576 577 5.297029 GGATTAGCAACTAGTCAATGTTCCC 59.703 44.000 0.00 0.00 0.00 3.97
577 578 5.880332 TGGATTAGCAACTAGTCAATGTTCC 59.120 40.000 0.00 0.50 0.00 3.62
643 644 1.067516 CGGTTCAATGGGAATGGATGC 59.932 52.381 0.00 0.00 37.93 3.91
831 850 1.546476 AGAGAGAATGGAAAGCGACGT 59.454 47.619 0.00 0.00 0.00 4.34
843 887 6.887545 TCTCTTAAAGACTTCGGAGAGAGAAT 59.112 38.462 15.62 0.00 38.43 2.40
901 950 4.742201 TCGACAGCTCGGCCTTGC 62.742 66.667 0.00 4.75 40.58 4.01
917 974 1.003233 GGGTTCCACTGAGGCTGTC 60.003 63.158 0.00 0.00 37.29 3.51
943 1018 1.068250 GGATTTCTCCGGCGAGAGG 59.932 63.158 20.15 0.46 45.86 3.69
1237 1333 4.455877 AGAAGGAAAAGGCAAGATTGTACG 59.544 41.667 0.00 0.00 0.00 3.67
1266 1374 0.833409 TGAGAACAGAGAGGCAGGCA 60.833 55.000 0.00 0.00 0.00 4.75
1267 1375 0.540923 ATGAGAACAGAGAGGCAGGC 59.459 55.000 0.00 0.00 0.00 4.85
1268 1376 2.109774 AGATGAGAACAGAGAGGCAGG 58.890 52.381 0.00 0.00 0.00 4.85
1269 1377 2.739287 GCAGATGAGAACAGAGAGGCAG 60.739 54.545 0.00 0.00 0.00 4.85
1379 1490 2.017049 AGACAACAAGCCAACACTGAC 58.983 47.619 0.00 0.00 0.00 3.51
1396 1507 9.794685 GGAAAGATAAATTTCTGAATGGAAGAC 57.205 33.333 0.00 0.00 38.86 3.01
1433 2022 2.158842 AGTCTCTGCATGAAGGGCATAC 60.159 50.000 0.00 0.00 41.06 2.39
1434 2023 2.121948 AGTCTCTGCATGAAGGGCATA 58.878 47.619 0.00 0.00 41.06 3.14
1438 2027 4.694509 GCATTATAGTCTCTGCATGAAGGG 59.305 45.833 0.00 0.00 34.77 3.95
1519 2125 8.671384 ATTAGGCGCATAAACTTTAGATTACA 57.329 30.769 19.27 0.00 0.00 2.41
1520 2126 8.770828 TGATTAGGCGCATAAACTTTAGATTAC 58.229 33.333 19.27 0.52 0.00 1.89
1553 2160 2.280628 CTAGTGGGATGTTTTCCGAGC 58.719 52.381 0.00 0.00 46.52 5.03
1557 2164 3.153919 TGTTGCTAGTGGGATGTTTTCC 58.846 45.455 0.00 0.00 44.62 3.13
1607 2224 4.503643 CCAAGAAAAGACATGGTTTGGCAT 60.504 41.667 0.00 0.00 34.87 4.40
1641 2278 7.080353 ACAACAAAACTAGTAGTGTGGTTTC 57.920 36.000 10.18 0.00 32.43 2.78
1692 2329 7.504911 TGATGGTAGGTAGTAGTAGTGGATTTC 59.495 40.741 0.00 0.00 0.00 2.17
1711 2348 9.690913 AAACATGTACTACTACTACTGATGGTA 57.309 33.333 0.00 0.00 0.00 3.25
1712 2349 8.467598 CAAACATGTACTACTACTACTGATGGT 58.532 37.037 0.00 0.00 0.00 3.55
1714 2351 7.973944 TGCAAACATGTACTACTACTACTGATG 59.026 37.037 0.00 0.00 0.00 3.07
1715 2352 8.063200 TGCAAACATGTACTACTACTACTGAT 57.937 34.615 0.00 0.00 0.00 2.90
1716 2353 7.457024 TGCAAACATGTACTACTACTACTGA 57.543 36.000 0.00 0.00 0.00 3.41
1742 2379 5.532779 TGCTTTCTCTTTCCCTTTCTCTTTC 59.467 40.000 0.00 0.00 0.00 2.62
1753 2390 4.940654 AGAGTGCTATTGCTTTCTCTTTCC 59.059 41.667 12.73 0.00 38.29 3.13
1754 2391 5.673318 GCAGAGTGCTATTGCTTTCTCTTTC 60.673 44.000 14.64 9.21 40.96 2.62
1755 2392 4.155644 GCAGAGTGCTATTGCTTTCTCTTT 59.844 41.667 14.64 0.50 40.96 2.52
1756 2393 3.688673 GCAGAGTGCTATTGCTTTCTCTT 59.311 43.478 14.64 4.11 40.96 2.85
1757 2394 3.269178 GCAGAGTGCTATTGCTTTCTCT 58.731 45.455 12.73 12.73 40.96 3.10
1758 2395 3.005554 TGCAGAGTGCTATTGCTTTCTC 58.994 45.455 0.00 6.17 45.31 2.87
1819 2456 2.755103 GGAGGAATTGGTGGATTCACAC 59.245 50.000 6.44 0.00 45.32 3.82
1826 2463 1.651737 TCTTCGGAGGAATTGGTGGA 58.348 50.000 0.00 0.00 0.00 4.02
1827 2464 2.489938 TTCTTCGGAGGAATTGGTGG 57.510 50.000 0.00 0.00 0.00 4.61
1828 2465 3.674997 TCTTTCTTCGGAGGAATTGGTG 58.325 45.455 3.23 0.00 0.00 4.17
1829 2466 3.583086 TCTCTTTCTTCGGAGGAATTGGT 59.417 43.478 3.23 0.00 0.00 3.67
1830 2467 4.207891 TCTCTTTCTTCGGAGGAATTGG 57.792 45.455 3.23 0.00 0.00 3.16
1831 2468 5.123027 CCTTTCTCTTTCTTCGGAGGAATTG 59.877 44.000 3.23 1.05 0.00 2.32
1832 2469 5.249420 CCTTTCTCTTTCTTCGGAGGAATT 58.751 41.667 3.23 0.00 0.00 2.17
1833 2470 4.837972 CCTTTCTCTTTCTTCGGAGGAAT 58.162 43.478 3.23 0.00 0.00 3.01
1834 2471 3.557264 GCCTTTCTCTTTCTTCGGAGGAA 60.557 47.826 0.00 0.00 0.00 3.36
1835 2472 2.028020 GCCTTTCTCTTTCTTCGGAGGA 60.028 50.000 0.00 0.00 0.00 3.71
1836 2473 2.351455 GCCTTTCTCTTTCTTCGGAGG 58.649 52.381 0.00 0.00 0.00 4.30
1837 2474 2.289694 TGGCCTTTCTCTTTCTTCGGAG 60.290 50.000 3.32 0.00 0.00 4.63
1838 2475 1.697432 TGGCCTTTCTCTTTCTTCGGA 59.303 47.619 3.32 0.00 0.00 4.55
1839 2476 2.185004 TGGCCTTTCTCTTTCTTCGG 57.815 50.000 3.32 0.00 0.00 4.30
1840 2477 4.006319 AGATTGGCCTTTCTCTTTCTTCG 58.994 43.478 3.32 0.00 0.00 3.79
1841 2478 4.764308 ACAGATTGGCCTTTCTCTTTCTTC 59.236 41.667 3.32 0.00 0.00 2.87
1842 2479 4.734266 ACAGATTGGCCTTTCTCTTTCTT 58.266 39.130 3.32 0.00 0.00 2.52
1843 2480 4.202503 TGACAGATTGGCCTTTCTCTTTCT 60.203 41.667 3.32 0.00 0.00 2.52
1844 2481 4.074970 TGACAGATTGGCCTTTCTCTTTC 58.925 43.478 3.32 4.19 0.00 2.62
1845 2482 4.104383 TGACAGATTGGCCTTTCTCTTT 57.896 40.909 3.32 0.00 0.00 2.52
1846 2483 3.795688 TGACAGATTGGCCTTTCTCTT 57.204 42.857 3.32 0.00 0.00 2.85
1850 2487 3.511146 TGGAATTGACAGATTGGCCTTTC 59.489 43.478 3.32 0.00 0.00 2.62
1860 2497 3.726557 AAGGAGCATGGAATTGACAGA 57.273 42.857 0.00 0.00 0.00 3.41
1871 2508 2.227388 GTGAACCACTGAAAGGAGCATG 59.773 50.000 0.00 0.00 39.30 4.06
1877 2514 3.545703 AGTGAAGTGAACCACTGAAAGG 58.454 45.455 0.00 0.00 44.62 3.11
1887 2529 2.495084 GGAGGGTGAAGTGAAGTGAAC 58.505 52.381 0.00 0.00 0.00 3.18
1888 2530 1.420138 GGGAGGGTGAAGTGAAGTGAA 59.580 52.381 0.00 0.00 0.00 3.18
1890 2532 0.764890 TGGGAGGGTGAAGTGAAGTG 59.235 55.000 0.00 0.00 0.00 3.16
1891 2533 1.143073 GTTGGGAGGGTGAAGTGAAGT 59.857 52.381 0.00 0.00 0.00 3.01
1892 2534 1.421646 AGTTGGGAGGGTGAAGTGAAG 59.578 52.381 0.00 0.00 0.00 3.02
1893 2535 1.420138 GAGTTGGGAGGGTGAAGTGAA 59.580 52.381 0.00 0.00 0.00 3.18
1894 2536 1.056660 GAGTTGGGAGGGTGAAGTGA 58.943 55.000 0.00 0.00 0.00 3.41
1895 2537 1.059913 AGAGTTGGGAGGGTGAAGTG 58.940 55.000 0.00 0.00 0.00 3.16
1896 2538 1.700186 GAAGAGTTGGGAGGGTGAAGT 59.300 52.381 0.00 0.00 0.00 3.01
1897 2539 1.003696 GGAAGAGTTGGGAGGGTGAAG 59.996 57.143 0.00 0.00 0.00 3.02
1898 2540 1.064825 GGAAGAGTTGGGAGGGTGAA 58.935 55.000 0.00 0.00 0.00 3.18
1899 2541 0.104672 TGGAAGAGTTGGGAGGGTGA 60.105 55.000 0.00 0.00 0.00 4.02
1900 2542 0.036875 GTGGAAGAGTTGGGAGGGTG 59.963 60.000 0.00 0.00 0.00 4.61
1901 2543 0.104409 AGTGGAAGAGTTGGGAGGGT 60.104 55.000 0.00 0.00 0.00 4.34
1902 2544 1.003696 GAAGTGGAAGAGTTGGGAGGG 59.996 57.143 0.00 0.00 0.00 4.30
1903 2545 1.981495 AGAAGTGGAAGAGTTGGGAGG 59.019 52.381 0.00 0.00 0.00 4.30
1904 2546 3.778954 AAGAAGTGGAAGAGTTGGGAG 57.221 47.619 0.00 0.00 0.00 4.30
1905 2547 3.716872 AGAAAGAAGTGGAAGAGTTGGGA 59.283 43.478 0.00 0.00 0.00 4.37
1906 2548 4.068599 GAGAAAGAAGTGGAAGAGTTGGG 58.931 47.826 0.00 0.00 0.00 4.12
1907 2549 3.743396 CGAGAAAGAAGTGGAAGAGTTGG 59.257 47.826 0.00 0.00 0.00 3.77
1910 2552 2.289133 GGCGAGAAAGAAGTGGAAGAGT 60.289 50.000 0.00 0.00 0.00 3.24
1912 2554 1.002087 GGGCGAGAAAGAAGTGGAAGA 59.998 52.381 0.00 0.00 0.00 2.87
1914 2556 0.762418 TGGGCGAGAAAGAAGTGGAA 59.238 50.000 0.00 0.00 0.00 3.53
1915 2557 0.762418 TTGGGCGAGAAAGAAGTGGA 59.238 50.000 0.00 0.00 0.00 4.02
1916 2558 1.826385 ATTGGGCGAGAAAGAAGTGG 58.174 50.000 0.00 0.00 0.00 4.00
1919 2561 4.379918 GGAAAGAATTGGGCGAGAAAGAAG 60.380 45.833 0.00 0.00 0.00 2.85
1922 2564 2.159517 CGGAAAGAATTGGGCGAGAAAG 60.160 50.000 0.00 0.00 0.00 2.62
1923 2565 1.810151 CGGAAAGAATTGGGCGAGAAA 59.190 47.619 0.00 0.00 0.00 2.52
1926 2568 1.130561 GAACGGAAAGAATTGGGCGAG 59.869 52.381 0.00 0.00 0.00 5.03
1930 2572 3.258123 ACATTGGAACGGAAAGAATTGGG 59.742 43.478 0.00 0.00 0.00 4.12
1951 2598 6.281848 TCGTTTCACAACTGACAAAGATAC 57.718 37.500 0.00 0.00 0.00 2.24
1967 2622 4.767409 TCCAAGAGAGAGAGATTCGTTTCA 59.233 41.667 0.00 0.00 0.00 2.69
1970 2625 5.659463 CAATCCAAGAGAGAGAGATTCGTT 58.341 41.667 0.00 0.00 0.00 3.85
1973 2628 4.050553 CGCAATCCAAGAGAGAGAGATTC 58.949 47.826 0.00 0.00 0.00 2.52
2002 2659 1.672145 GCGACTGACTCCCTTAACACC 60.672 57.143 0.00 0.00 0.00 4.16
2003 2660 1.672145 GGCGACTGACTCCCTTAACAC 60.672 57.143 0.00 0.00 0.00 3.32
2004 2661 0.606604 GGCGACTGACTCCCTTAACA 59.393 55.000 0.00 0.00 0.00 2.41
2005 2662 0.896226 AGGCGACTGACTCCCTTAAC 59.104 55.000 0.00 0.00 41.13 2.01
2006 2663 1.275291 CAAGGCGACTGACTCCCTTAA 59.725 52.381 0.00 0.00 42.68 1.85
2007 2664 0.895530 CAAGGCGACTGACTCCCTTA 59.104 55.000 0.00 0.00 42.68 2.69
2009 2666 2.286523 CCAAGGCGACTGACTCCCT 61.287 63.158 0.00 0.00 42.68 4.20
2010 2667 2.266055 CCAAGGCGACTGACTCCC 59.734 66.667 0.00 0.00 42.68 4.30
2012 2669 0.034896 TTTCCCAAGGCGACTGACTC 59.965 55.000 0.00 0.00 42.68 3.36
2044 2711 1.303317 CCAGCCAGGTACCACAACC 60.303 63.158 15.94 0.00 40.06 3.77
2133 2812 1.004044 AGGTCCACATGAAGCTGAAGG 59.996 52.381 0.00 0.00 0.00 3.46
2149 2828 1.452833 GGCTGGCAGGATCAAGGTC 60.453 63.158 17.64 0.00 0.00 3.85
2151 2830 0.822532 GATGGCTGGCAGGATCAAGG 60.823 60.000 17.64 0.00 0.00 3.61
2155 2834 2.502295 CTAAAGATGGCTGGCAGGATC 58.498 52.381 17.64 2.50 0.00 3.36
2158 2838 0.394762 TGCTAAAGATGGCTGGCAGG 60.395 55.000 17.64 0.00 33.52 4.85
2159 2839 1.022735 CTGCTAAAGATGGCTGGCAG 58.977 55.000 10.94 10.94 37.01 4.85
2169 2849 4.621747 GCTGCCTAGAAAGTCTGCTAAAGA 60.622 45.833 0.00 0.00 0.00 2.52
2176 2856 2.200067 CGATGCTGCCTAGAAAGTCTG 58.800 52.381 0.00 0.00 0.00 3.51
2196 2876 2.033801 GTGTTGATGCAGGTATGATGCC 59.966 50.000 0.00 0.00 43.18 4.40
2197 2877 2.033801 GGTGTTGATGCAGGTATGATGC 59.966 50.000 0.00 0.00 44.11 3.91
2198 2878 3.281158 TGGTGTTGATGCAGGTATGATG 58.719 45.455 0.00 0.00 0.00 3.07
2200 2880 2.305635 ACTGGTGTTGATGCAGGTATGA 59.694 45.455 0.00 0.00 0.00 2.15
2202 2882 2.040278 ACACTGGTGTTGATGCAGGTAT 59.960 45.455 0.01 0.00 41.83 2.73
2203 2883 1.419762 ACACTGGTGTTGATGCAGGTA 59.580 47.619 0.01 0.00 41.83 3.08
2206 2886 1.265095 GTCACACTGGTGTTGATGCAG 59.735 52.381 3.41 0.00 45.45 4.41
2208 2888 0.235665 CGTCACACTGGTGTTGATGC 59.764 55.000 3.41 0.00 45.45 3.91
2209 2889 1.864565 TCGTCACACTGGTGTTGATG 58.135 50.000 3.41 10.20 45.45 3.07
2210 2890 2.613026 TTCGTCACACTGGTGTTGAT 57.387 45.000 3.41 0.00 45.45 2.57
2211 2891 2.613026 ATTCGTCACACTGGTGTTGA 57.387 45.000 3.41 3.34 45.45 3.18
2212 2892 2.872245 AGAATTCGTCACACTGGTGTTG 59.128 45.455 3.41 1.14 45.45 3.33
2213 2893 2.872245 CAGAATTCGTCACACTGGTGTT 59.128 45.455 3.41 0.00 45.45 3.32
2214 2894 2.483876 CAGAATTCGTCACACTGGTGT 58.516 47.619 0.00 0.01 45.45 4.16
2215 2895 1.195448 GCAGAATTCGTCACACTGGTG 59.805 52.381 0.00 0.00 46.66 4.17
2216 2896 1.202639 TGCAGAATTCGTCACACTGGT 60.203 47.619 0.00 0.00 0.00 4.00
2219 2899 2.838736 ACTTGCAGAATTCGTCACACT 58.161 42.857 0.00 0.00 0.00 3.55
2221 2901 4.152223 CACATACTTGCAGAATTCGTCACA 59.848 41.667 0.00 0.00 0.00 3.58
2222 2902 4.152402 ACACATACTTGCAGAATTCGTCAC 59.848 41.667 0.00 0.00 0.00 3.67
2224 2904 4.436050 CCACACATACTTGCAGAATTCGTC 60.436 45.833 0.00 0.00 0.00 4.20
2225 2905 3.436704 CCACACATACTTGCAGAATTCGT 59.563 43.478 0.00 0.00 0.00 3.85
2226 2906 3.684305 TCCACACATACTTGCAGAATTCG 59.316 43.478 0.00 0.00 0.00 3.34
2227 2907 5.575957 CATCCACACATACTTGCAGAATTC 58.424 41.667 0.00 0.00 0.00 2.17
2228 2908 4.142315 GCATCCACACATACTTGCAGAATT 60.142 41.667 0.00 0.00 0.00 2.17
2229 2909 3.379372 GCATCCACACATACTTGCAGAAT 59.621 43.478 0.00 0.00 0.00 2.40
2230 2910 2.749076 GCATCCACACATACTTGCAGAA 59.251 45.455 0.00 0.00 0.00 3.02
2232 2912 2.086094 TGCATCCACACATACTTGCAG 58.914 47.619 0.00 0.00 35.36 4.41
2235 2915 2.086094 TGCTGCATCCACACATACTTG 58.914 47.619 0.00 0.00 0.00 3.16
2236 2916 2.495155 TGCTGCATCCACACATACTT 57.505 45.000 0.00 0.00 0.00 2.24
2237 2917 2.294979 CATGCTGCATCCACACATACT 58.705 47.619 13.10 0.00 0.00 2.12
2238 2918 1.268896 GCATGCTGCATCCACACATAC 60.269 52.381 13.10 0.00 44.26 2.39
2239 2919 1.026584 GCATGCTGCATCCACACATA 58.973 50.000 13.10 0.00 44.26 2.29
2240 2920 1.813859 GCATGCTGCATCCACACAT 59.186 52.632 13.10 0.00 44.26 3.21
2241 2921 3.280211 GCATGCTGCATCCACACA 58.720 55.556 13.10 0.00 44.26 3.72
2250 2930 1.445582 GTTCTGCCAAGCATGCTGC 60.446 57.895 23.48 21.52 45.46 5.25
2252 2932 1.859427 CGTGTTCTGCCAAGCATGCT 61.859 55.000 16.30 16.30 38.13 3.79
2253 2933 1.443194 CGTGTTCTGCCAAGCATGC 60.443 57.895 10.51 10.51 38.13 4.06
2254 2934 0.110056 GACGTGTTCTGCCAAGCATG 60.110 55.000 0.00 0.00 38.13 4.06
2255 2935 0.534877 TGACGTGTTCTGCCAAGCAT 60.535 50.000 0.00 0.00 38.13 3.79
2256 2936 0.534877 ATGACGTGTTCTGCCAAGCA 60.535 50.000 0.00 0.00 36.92 3.91
2257 2937 0.593128 AATGACGTGTTCTGCCAAGC 59.407 50.000 0.00 0.00 0.00 4.01
2258 2938 3.123621 GTCTAATGACGTGTTCTGCCAAG 59.876 47.826 0.00 0.00 33.15 3.61
2259 2939 3.064207 GTCTAATGACGTGTTCTGCCAA 58.936 45.455 0.00 0.00 33.15 4.52
2260 2940 2.036604 TGTCTAATGACGTGTTCTGCCA 59.963 45.455 0.00 0.00 45.70 4.92
2261 2941 2.683968 TGTCTAATGACGTGTTCTGCC 58.316 47.619 0.00 0.00 45.70 4.85
2262 2942 3.741344 AGTTGTCTAATGACGTGTTCTGC 59.259 43.478 0.00 0.00 45.70 4.26
2263 2943 5.462068 TGAAGTTGTCTAATGACGTGTTCTG 59.538 40.000 0.00 0.00 45.70 3.02
2264 2944 5.597806 TGAAGTTGTCTAATGACGTGTTCT 58.402 37.500 0.00 0.00 45.70 3.01
2265 2945 5.900339 TGAAGTTGTCTAATGACGTGTTC 57.100 39.130 0.00 0.00 45.70 3.18
2266 2946 5.758296 ACATGAAGTTGTCTAATGACGTGTT 59.242 36.000 0.00 0.00 45.70 3.32
2267 2947 5.177511 CACATGAAGTTGTCTAATGACGTGT 59.822 40.000 0.00 0.00 45.70 4.49
2268 2948 5.389830 CCACATGAAGTTGTCTAATGACGTG 60.390 44.000 0.00 0.00 45.70 4.49
2269 2949 4.690748 CCACATGAAGTTGTCTAATGACGT 59.309 41.667 0.00 0.00 45.70 4.34
2270 2950 4.690748 ACCACATGAAGTTGTCTAATGACG 59.309 41.667 0.00 0.00 45.70 4.35
2272 2952 6.545666 ACAAACCACATGAAGTTGTCTAATGA 59.454 34.615 0.00 0.00 0.00 2.57
2273 2953 6.738114 ACAAACCACATGAAGTTGTCTAATG 58.262 36.000 0.00 0.00 0.00 1.90
2274 2954 6.016276 GGACAAACCACATGAAGTTGTCTAAT 60.016 38.462 22.80 3.05 38.79 1.73
2275 2955 5.298276 GGACAAACCACATGAAGTTGTCTAA 59.702 40.000 22.80 0.00 38.79 2.10
2276 2956 4.819630 GGACAAACCACATGAAGTTGTCTA 59.180 41.667 22.80 0.00 38.79 2.59
2277 2957 3.632145 GGACAAACCACATGAAGTTGTCT 59.368 43.478 22.80 6.51 38.79 3.41
2278 2958 3.243401 GGGACAAACCACATGAAGTTGTC 60.243 47.826 19.02 19.02 41.20 3.18
2279 2959 2.693074 GGGACAAACCACATGAAGTTGT 59.307 45.455 0.00 4.14 41.20 3.32
2280 2960 2.692557 TGGGACAAACCACATGAAGTTG 59.307 45.455 0.00 0.70 41.20 3.16
2281 2961 2.958355 CTGGGACAAACCACATGAAGTT 59.042 45.455 0.00 0.00 38.70 2.66
2282 2962 2.586425 CTGGGACAAACCACATGAAGT 58.414 47.619 0.00 0.00 38.70 3.01
2283 2963 1.270550 GCTGGGACAAACCACATGAAG 59.729 52.381 0.00 0.00 38.70 3.02
2285 2965 0.539438 GGCTGGGACAAACCACATGA 60.539 55.000 0.00 0.00 38.70 3.07
2287 2967 0.105760 TTGGCTGGGACAAACCACAT 60.106 50.000 0.00 0.00 43.17 3.21
2288 2968 1.040339 GTTGGCTGGGACAAACCACA 61.040 55.000 0.00 0.00 43.17 4.17
2289 2969 0.755327 AGTTGGCTGGGACAAACCAC 60.755 55.000 0.00 0.00 43.17 4.16
2290 2970 0.032615 AAGTTGGCTGGGACAAACCA 60.033 50.000 0.00 0.00 42.01 3.67
2291 2971 0.673985 GAAGTTGGCTGGGACAAACC 59.326 55.000 0.00 0.00 38.70 3.27
2293 2973 1.962807 CATGAAGTTGGCTGGGACAAA 59.037 47.619 0.00 0.00 38.70 2.83
2294 2974 1.133513 ACATGAAGTTGGCTGGGACAA 60.134 47.619 0.00 0.00 38.70 3.18
2295 2975 0.478072 ACATGAAGTTGGCTGGGACA 59.522 50.000 0.00 0.00 0.00 4.02
2296 2976 0.883833 CACATGAAGTTGGCTGGGAC 59.116 55.000 0.00 0.00 0.00 4.46
2298 2978 1.880819 GCCACATGAAGTTGGCTGGG 61.881 60.000 15.86 0.00 39.68 4.45
2299 2979 1.180456 TGCCACATGAAGTTGGCTGG 61.180 55.000 21.68 8.21 41.81 4.85
2301 2981 1.530013 GCTGCCACATGAAGTTGGCT 61.530 55.000 21.68 0.00 41.81 4.75
2304 2984 1.542472 TGATGCTGCCACATGAAGTTG 59.458 47.619 0.00 0.00 0.00 3.16
2305 2985 1.816835 CTGATGCTGCCACATGAAGTT 59.183 47.619 0.00 0.00 0.00 2.66
2306 2986 1.460504 CTGATGCTGCCACATGAAGT 58.539 50.000 0.00 0.00 0.00 3.01
2310 2990 0.030773 GATGCTGATGCTGCCACATG 59.969 55.000 0.00 0.00 40.48 3.21
2311 2991 0.395173 TGATGCTGATGCTGCCACAT 60.395 50.000 0.00 0.00 40.48 3.21
2312 2992 0.395173 ATGATGCTGATGCTGCCACA 60.395 50.000 0.00 0.00 40.48 4.17
2313 2993 0.311165 GATGATGCTGATGCTGCCAC 59.689 55.000 0.00 0.00 40.48 5.01
2315 2995 1.068264 CATGATGATGCTGATGCTGCC 60.068 52.381 0.00 0.00 40.48 4.85
2316 2996 1.609072 ACATGATGATGCTGATGCTGC 59.391 47.619 0.00 0.00 40.48 5.25
2317 2997 2.618709 ACACATGATGATGCTGATGCTG 59.381 45.455 0.00 0.00 40.48 4.41
2318 2998 2.879026 GACACATGATGATGCTGATGCT 59.121 45.455 0.00 0.00 40.48 3.79
2319 2999 2.879026 AGACACATGATGATGCTGATGC 59.121 45.455 0.00 0.00 40.20 3.91
2320 3000 3.877508 ACAGACACATGATGATGCTGATG 59.122 43.478 15.68 5.02 33.11 3.07
2321 3001 3.877508 CACAGACACATGATGATGCTGAT 59.122 43.478 15.68 3.15 33.11 2.90
2322 3002 3.267483 CACAGACACATGATGATGCTGA 58.733 45.455 15.68 0.00 33.11 4.26
2323 3003 3.007635 ACACAGACACATGATGATGCTG 58.992 45.455 0.00 5.62 32.14 4.41
2340 3020 2.027653 TGACTTCAACCAGTGTGACACA 60.028 45.455 18.95 3.56 36.74 3.72
2351 3031 1.198637 GTGCTGATGCTGACTTCAACC 59.801 52.381 0.00 0.00 40.48 3.77
2353 3033 1.202794 TGGTGCTGATGCTGACTTCAA 60.203 47.619 0.00 0.00 40.48 2.69
2356 3036 0.399454 ACTGGTGCTGATGCTGACTT 59.601 50.000 0.00 0.00 40.48 3.01
2365 3045 0.321919 GCCAATCAGACTGGTGCTGA 60.322 55.000 1.81 0.00 45.52 4.26
2373 3053 2.361757 CGAGAGATGAGCCAATCAGACT 59.638 50.000 0.00 0.00 42.53 3.24
2424 4549 2.164338 TGCTGAATTTACGGGGGAAAC 58.836 47.619 0.00 0.00 0.00 2.78
2432 4557 6.077197 TGTCGATTTTCTTGCTGAATTTACG 58.923 36.000 0.00 0.00 34.24 3.18
2458 4583 1.269831 ACACAGAACTCGCAAGGAGAC 60.270 52.381 0.00 0.00 46.23 3.36
2459 4584 1.040646 ACACAGAACTCGCAAGGAGA 58.959 50.000 0.00 0.00 46.23 3.71
2461 4586 0.464036 ACACACAGAACTCGCAAGGA 59.536 50.000 0.00 0.00 38.47 3.36
2462 4587 1.299541 AACACACAGAACTCGCAAGG 58.700 50.000 0.00 0.00 38.47 3.61
2470 4595 8.597662 TTGGTATTCTACTAAACACACAGAAC 57.402 34.615 0.00 0.00 0.00 3.01
2473 4598 8.827177 TTCTTGGTATTCTACTAAACACACAG 57.173 34.615 0.00 0.00 0.00 3.66
2496 4621 5.418310 TTGACACCGACTGATTCTTTTTC 57.582 39.130 0.00 0.00 0.00 2.29
2498 4623 5.828299 TTTTGACACCGACTGATTCTTTT 57.172 34.783 0.00 0.00 0.00 2.27
2502 4627 7.305474 ACAAATATTTTGACACCGACTGATTC 58.695 34.615 6.96 0.00 0.00 2.52
2503 4628 7.214467 ACAAATATTTTGACACCGACTGATT 57.786 32.000 6.96 0.00 0.00 2.57
2505 4630 7.308109 GGTTACAAATATTTTGACACCGACTGA 60.308 37.037 6.96 0.00 0.00 3.41
2506 4631 6.799925 GGTTACAAATATTTTGACACCGACTG 59.200 38.462 6.96 0.00 0.00 3.51
2507 4632 6.713450 AGGTTACAAATATTTTGACACCGACT 59.287 34.615 6.96 0.00 33.37 4.18
2508 4633 6.905578 AGGTTACAAATATTTTGACACCGAC 58.094 36.000 6.96 0.00 33.37 4.79
2509 4634 6.128499 CGAGGTTACAAATATTTTGACACCGA 60.128 38.462 6.96 0.00 33.37 4.69
2510 4635 6.019152 CGAGGTTACAAATATTTTGACACCG 58.981 40.000 6.96 2.32 33.37 4.94
2511 4636 5.798434 GCGAGGTTACAAATATTTTGACACC 59.202 40.000 6.96 10.68 0.00 4.16
2517 4642 6.262601 CGATTGGCGAGGTTACAAATATTTT 58.737 36.000 0.00 0.00 44.57 1.82
2520 4645 3.250040 GCGATTGGCGAGGTTACAAATAT 59.750 43.478 0.00 0.00 44.57 1.28
2536 4661 4.358851 TCTTTTGAAACTTGGTGCGATTG 58.641 39.130 0.00 0.00 0.00 2.67
2538 4663 4.647424 TTCTTTTGAAACTTGGTGCGAT 57.353 36.364 0.00 0.00 35.17 4.58
2540 4665 4.803088 TGAATTCTTTTGAAACTTGGTGCG 59.197 37.500 7.05 0.00 42.31 5.34
2541 4666 6.660887 TTGAATTCTTTTGAAACTTGGTGC 57.339 33.333 7.05 0.00 42.31 5.01
2544 4669 9.868389 GCTAATTTGAATTCTTTTGAAACTTGG 57.132 29.630 7.05 0.00 42.31 3.61
2620 4771 5.181690 TCGGCCATATTGTTATTTTCTGC 57.818 39.130 2.24 0.00 0.00 4.26
2653 4809 2.223711 CCAAAACCGGACAGAAGTTTGG 60.224 50.000 9.46 11.65 34.12 3.28
2668 4824 5.930569 ACTTACATCTCGGTAGAACCAAAAC 59.069 40.000 0.00 0.00 38.47 2.43
2669 4825 6.105397 ACTTACATCTCGGTAGAACCAAAA 57.895 37.500 0.00 0.00 38.47 2.44
2674 4830 5.228843 GCGTTTACTTACATCTCGGTAGAAC 59.771 44.000 0.00 0.00 34.73 3.01
2676 4832 4.494690 CGCGTTTACTTACATCTCGGTAGA 60.495 45.833 0.00 0.00 35.80 2.59
2678 4834 3.126858 ACGCGTTTACTTACATCTCGGTA 59.873 43.478 5.58 0.00 0.00 4.02
2680 4836 2.523015 ACGCGTTTACTTACATCTCGG 58.477 47.619 5.58 0.00 0.00 4.63
2681 4837 3.362831 ACAACGCGTTTACTTACATCTCG 59.637 43.478 24.21 8.68 0.00 4.04
2682 4838 4.898328 ACAACGCGTTTACTTACATCTC 57.102 40.909 24.21 0.00 0.00 2.75
2683 4839 5.464168 ACTACAACGCGTTTACTTACATCT 58.536 37.500 24.21 0.00 0.00 2.90
2684 4840 5.752098 ACTACAACGCGTTTACTTACATC 57.248 39.130 24.21 0.00 0.00 3.06
2685 4841 5.107375 CCAACTACAACGCGTTTACTTACAT 60.107 40.000 24.21 0.98 0.00 2.29
2686 4842 4.208873 CCAACTACAACGCGTTTACTTACA 59.791 41.667 24.21 1.39 0.00 2.41
2687 4843 4.444056 TCCAACTACAACGCGTTTACTTAC 59.556 41.667 24.21 0.00 0.00 2.34
2688 4844 4.615949 TCCAACTACAACGCGTTTACTTA 58.384 39.130 24.21 10.17 0.00 2.24
2689 4845 3.456280 TCCAACTACAACGCGTTTACTT 58.544 40.909 24.21 9.51 0.00 2.24
2690 4846 3.096489 TCCAACTACAACGCGTTTACT 57.904 42.857 24.21 10.26 0.00 2.24
2691 4847 4.394099 AATCCAACTACAACGCGTTTAC 57.606 40.909 24.21 0.00 0.00 2.01
2692 4848 5.421212 AAAATCCAACTACAACGCGTTTA 57.579 34.783 24.21 16.24 0.00 2.01
2693 4849 3.974871 AAATCCAACTACAACGCGTTT 57.025 38.095 24.21 15.97 0.00 3.60
2694 4850 3.974871 AAAATCCAACTACAACGCGTT 57.025 38.095 20.79 20.79 0.00 4.84
2695 4851 3.312973 TCAAAAATCCAACTACAACGCGT 59.687 39.130 5.58 5.58 0.00 6.01
2696 4852 3.879427 TCAAAAATCCAACTACAACGCG 58.121 40.909 3.53 3.53 0.00 6.01
2739 4903 6.016360 CACACTGTTACCTCATTCCAAAATCA 60.016 38.462 0.00 0.00 0.00 2.57
2758 4922 7.878477 AATAAAATGCAATTCAGACACACTG 57.122 32.000 0.00 0.00 46.97 3.66
2760 4924 9.584839 GAAAAATAAAATGCAATTCAGACACAC 57.415 29.630 0.00 0.00 33.67 3.82
2789 4965 3.857010 GCGGTGGAATTTCTGTCCAAAAG 60.857 47.826 0.00 0.00 46.66 2.27
2877 5053 0.680921 CCTTCATGGCCACGATGGTT 60.681 55.000 22.20 0.00 40.46 3.67
3600 5780 2.822306 GGCGAAGTCGATGACAACA 58.178 52.632 4.59 0.00 43.02 3.33
3696 5876 1.216977 CTTCATCACCGCCACCGTA 59.783 57.895 0.00 0.00 0.00 4.02
3799 5979 2.671070 CCTGGTCACCATCGCCTT 59.329 61.111 0.00 0.00 30.82 4.35
3805 5985 1.078214 CGATGTGCCTGGTCACCAT 60.078 57.895 0.00 10.40 36.17 3.55
4149 6332 0.904865 TCTTCCATCCACGCTCCTGT 60.905 55.000 0.00 0.00 0.00 4.00
4336 6524 5.709164 ACAAGCTAGATGAATTGAGCAAAGT 59.291 36.000 0.00 0.00 37.40 2.66
4370 6562 6.780706 ATGTAACGAACAAGTTAGTGAAGG 57.219 37.500 0.00 0.00 42.70 3.46
4374 6566 6.721321 ACCAAATGTAACGAACAAGTTAGTG 58.279 36.000 0.00 0.00 42.70 2.74
4376 6568 7.480542 GCATACCAAATGTAACGAACAAGTTAG 59.519 37.037 0.00 0.00 42.70 2.34
4390 6582 5.999205 TCCAAAATCTGCATACCAAATGT 57.001 34.783 0.00 0.00 0.00 2.71
4454 6646 8.838649 ATTTCAAACCCTTGGTTATAGCTAAT 57.161 30.769 0.00 0.00 46.20 1.73
4486 6678 1.683917 AGCTTGTGCGTAGGATCCTAG 59.316 52.381 22.30 16.01 45.42 3.02
4540 6735 0.698818 CCCTTTGGCTAGTGGAAGGT 59.301 55.000 14.77 0.00 37.53 3.50
4553 6748 1.186917 TGCAACTCATGGGCCCTTTG 61.187 55.000 25.70 20.47 0.00 2.77
4563 6758 5.446143 TTTGTTATTCCGTTGCAACTCAT 57.554 34.783 26.09 16.70 0.00 2.90
4577 6772 9.271828 GATTTGAGGACCACAATTTTTGTTATT 57.728 29.630 5.11 0.00 43.23 1.40
4583 6778 6.888105 ACTTGATTTGAGGACCACAATTTTT 58.112 32.000 5.11 0.00 0.00 1.94
4663 6858 3.066342 AGAATGTACGTGTCCTACATCCG 59.934 47.826 0.00 0.00 34.37 4.18
4671 6992 4.181578 AGCATGTTAGAATGTACGTGTCC 58.818 43.478 0.00 0.00 34.52 4.02
4679 7000 6.822667 TTCATTGTGAGCATGTTAGAATGT 57.177 33.333 12.17 0.00 0.00 2.71
4696 7017 7.646314 GGATCAAGTCCAACATCTATTCATTG 58.354 38.462 0.00 0.00 46.96 2.82
4697 7018 7.814264 GGATCAAGTCCAACATCTATTCATT 57.186 36.000 0.00 0.00 46.96 2.57
4756 7082 7.108847 CCTTCTCCTTTTCTTCTCATACATGT 58.891 38.462 2.69 2.69 0.00 3.21
4758 7084 7.038017 TCACCTTCTCCTTTTCTTCTCATACAT 60.038 37.037 0.00 0.00 0.00 2.29
4783 7109 2.315925 TTTCATCCATCGTGAGGCTC 57.684 50.000 7.79 7.79 0.00 4.70
4815 7146 0.528470 GACTGCAGCTCTAGGACGTT 59.472 55.000 15.27 0.00 0.00 3.99
4816 7147 0.609406 TGACTGCAGCTCTAGGACGT 60.609 55.000 15.27 0.00 0.00 4.34
4817 7148 0.743688 ATGACTGCAGCTCTAGGACG 59.256 55.000 15.27 0.00 0.00 4.79
4828 7677 2.076100 GGTTCAACGATGATGACTGCA 58.924 47.619 0.00 0.00 34.96 4.41
4874 7723 1.202065 CGATGGCAAGATTTGGTGTCG 60.202 52.381 0.00 0.00 0.00 4.35
4879 7728 2.728846 CGTGTTCGATGGCAAGATTTGG 60.729 50.000 0.00 0.00 39.71 3.28
4887 7736 3.410516 CGTGCGTGTTCGATGGCA 61.411 61.111 0.00 0.00 39.71 4.92
4895 7744 2.202905 TTTCCCGACGTGCGTGTT 60.203 55.556 0.67 0.00 38.67 3.32
4932 7781 2.891580 GCATAGATTCCTACCGTCTCCA 59.108 50.000 0.00 0.00 0.00 3.86
4966 7818 0.679002 TCGGCCAGCTAGACGTACTT 60.679 55.000 7.42 0.00 0.00 2.24
4982 7834 3.258622 ACTCCAAACCTCTTAGAGTTCGG 59.741 47.826 8.55 3.57 34.17 4.30
4997 7849 4.080582 TCAGTTTGTCTTCTGGACTCCAAA 60.081 41.667 0.00 0.00 44.74 3.28
5019 7871 4.798574 ACGGATGATGTTGCTTCTTTTTC 58.201 39.130 0.00 0.00 0.00 2.29
5020 7872 4.321230 GGACGGATGATGTTGCTTCTTTTT 60.321 41.667 0.00 0.00 0.00 1.94
5021 7873 3.191371 GGACGGATGATGTTGCTTCTTTT 59.809 43.478 0.00 0.00 0.00 2.27
5022 7874 2.749621 GGACGGATGATGTTGCTTCTTT 59.250 45.455 0.00 0.00 0.00 2.52
5135 7990 1.285280 TCCCCACTCCAGTTACCATG 58.715 55.000 0.00 0.00 0.00 3.66
5139 7994 0.462047 CGCATCCCCACTCCAGTTAC 60.462 60.000 0.00 0.00 0.00 2.50
5158 8013 4.335594 GTGTGGATGGAGCCAATAAAGTAC 59.664 45.833 0.00 0.00 40.20 2.73
5175 8030 6.348498 CCACTTGTATATGATCTTGTGTGGA 58.652 40.000 0.00 0.00 42.46 4.02
5182 8037 8.023021 TCACTAAGCCACTTGTATATGATCTT 57.977 34.615 0.00 0.00 0.00 2.40
5245 8100 5.946942 AGAGTCATCACCACAAGTATGAT 57.053 39.130 0.00 0.00 33.28 2.45
5282 8137 4.982916 AGAACAGTGCTTGAGTACTAAACG 59.017 41.667 0.00 0.00 38.95 3.60
5288 8143 5.774630 ACTAAGAGAACAGTGCTTGAGTAC 58.225 41.667 0.00 0.00 0.00 2.73
5363 8221 4.770531 AGGAACACAAATAAAAGGGTAGCC 59.229 41.667 1.60 1.60 0.00 3.93
5364 8222 5.977489 AGGAACACAAATAAAAGGGTAGC 57.023 39.130 0.00 0.00 0.00 3.58
5368 8226 5.975693 TGCTAGGAACACAAATAAAAGGG 57.024 39.130 0.00 0.00 0.00 3.95
5370 8228 9.394477 GTAAGTTGCTAGGAACACAAATAAAAG 57.606 33.333 26.40 0.00 0.00 2.27
5398 8256 6.128090 GCCGTAGTTTGAAAATAGCCTACTTT 60.128 38.462 0.00 0.00 0.00 2.66
5413 8271 2.171635 GCTCCCAAGCCGTAGTTTG 58.828 57.895 0.00 0.00 43.10 2.93
5429 8287 5.830000 TCACTCATGTAGTTACGTATGCT 57.170 39.130 0.00 0.57 35.76 3.79
5432 8290 6.348295 CCGCTATCACTCATGTAGTTACGTAT 60.348 42.308 0.00 0.00 35.76 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.