Multiple sequence alignment - TraesCS3B01G032200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G032200 chr3B 100.000 3394 0 0 1 3394 14704844 14701451 0.000000e+00 6268.0
1 TraesCS3B01G032200 chr3B 98.787 742 3 2 1 737 6237450 6238190 0.000000e+00 1315.0
2 TraesCS3B01G032200 chr3B 85.587 1124 128 22 744 1862 14462972 14464066 0.000000e+00 1147.0
3 TraesCS3B01G032200 chr3B 99.652 574 2 0 2313 2886 14997705 14997132 0.000000e+00 1050.0
4 TraesCS3B01G032200 chr3B 88.457 875 81 10 2013 2886 14464152 14465007 0.000000e+00 1038.0
5 TraesCS3B01G032200 chr3B 95.886 632 22 1 2255 2886 14694358 14693731 0.000000e+00 1020.0
6 TraesCS3B01G032200 chr3B 86.387 786 86 16 761 1542 14696019 14695251 0.000000e+00 839.0
7 TraesCS3B01G032200 chr3B 82.148 633 84 20 1538 2163 14694991 14694381 1.810000e-142 516.0
8 TraesCS3B01G032200 chr3B 88.107 412 28 4 2972 3370 14462594 14462997 1.430000e-128 470.0
9 TraesCS3B01G032200 chr3B 90.764 314 12 5 2894 3206 14997998 14997701 1.470000e-108 403.0
10 TraesCS3B01G032200 chr3B 85.417 96 8 1 2887 2982 14462333 14462422 1.000000e-15 95.3
11 TraesCS3B01G032200 chr3A 95.802 2144 72 14 747 2886 17699092 17701221 0.000000e+00 3445.0
12 TraesCS3B01G032200 chr3A 87.921 1010 107 12 894 1898 16596946 16597945 0.000000e+00 1175.0
13 TraesCS3B01G032200 chr3A 89.231 845 84 6 2043 2886 16598052 16598890 0.000000e+00 1050.0
14 TraesCS3B01G032200 chr3D 95.200 2146 70 16 742 2886 10638930 10636817 0.000000e+00 3362.0
15 TraesCS3B01G032200 chr3D 86.488 2087 231 30 814 2886 10520262 10518213 0.000000e+00 2244.0
16 TraesCS3B01G032200 chr3D 83.234 334 40 14 45 370 582050294 582049969 3.310000e-75 292.0
17 TraesCS3B01G032200 chr3D 83.333 240 24 8 3058 3296 10520574 10520350 1.230000e-49 207.0
18 TraesCS3B01G032200 chrUn 98.787 742 3 2 1 737 319254365 319253625 0.000000e+00 1315.0
19 TraesCS3B01G032200 chrUn 100.000 434 0 0 1 434 435816034 435815601 0.000000e+00 802.0
20 TraesCS3B01G032200 chrUn 98.851 261 3 0 477 737 331253280 331253540 1.840000e-127 466.0
21 TraesCS3B01G032200 chr6B 80.139 574 106 7 2300 2871 40441841 40442408 4.050000e-114 422.0
22 TraesCS3B01G032200 chr6B 88.636 88 8 1 649 736 260782788 260782703 4.630000e-19 106.0
23 TraesCS3B01G032200 chr6A 93.750 256 12 4 118 372 596348684 596348432 6.870000e-102 381.0
24 TraesCS3B01G032200 chr5D 93.750 256 11 4 118 372 38751556 38751305 2.470000e-101 379.0
25 TraesCS3B01G032200 chr5B 82.941 340 45 13 42 374 661313872 661314205 9.210000e-76 294.0
26 TraesCS3B01G032200 chr5B 83.618 293 39 9 42 328 356689013 356689302 2.010000e-67 267.0
27 TraesCS3B01G032200 chr1B 80.965 373 53 16 5 371 648663521 648663161 2.580000e-71 279.0
28 TraesCS3B01G032200 chr4A 90.099 101 9 1 637 737 319919522 319919621 2.750000e-26 130.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G032200 chr3B 14701451 14704844 3393 True 6268.000000 6268 100.000000 1 3394 1 chr3B.!!$R1 3393
1 TraesCS3B01G032200 chr3B 6237450 6238190 740 False 1315.000000 1315 98.787000 1 737 1 chr3B.!!$F1 736
2 TraesCS3B01G032200 chr3B 14693731 14696019 2288 True 791.666667 1020 88.140333 761 2886 3 chr3B.!!$R2 2125
3 TraesCS3B01G032200 chr3B 14997132 14997998 866 True 726.500000 1050 95.208000 2313 3206 2 chr3B.!!$R3 893
4 TraesCS3B01G032200 chr3B 14462333 14465007 2674 False 687.575000 1147 86.892000 744 3370 4 chr3B.!!$F2 2626
5 TraesCS3B01G032200 chr3A 17699092 17701221 2129 False 3445.000000 3445 95.802000 747 2886 1 chr3A.!!$F1 2139
6 TraesCS3B01G032200 chr3A 16596946 16598890 1944 False 1112.500000 1175 88.576000 894 2886 2 chr3A.!!$F2 1992
7 TraesCS3B01G032200 chr3D 10636817 10638930 2113 True 3362.000000 3362 95.200000 742 2886 1 chr3D.!!$R1 2144
8 TraesCS3B01G032200 chr3D 10518213 10520574 2361 True 1225.500000 2244 84.910500 814 3296 2 chr3D.!!$R3 2482
9 TraesCS3B01G032200 chrUn 319253625 319254365 740 True 1315.000000 1315 98.787000 1 737 1 chrUn.!!$R1 736
10 TraesCS3B01G032200 chr6B 40441841 40442408 567 False 422.000000 422 80.139000 2300 2871 1 chr6B.!!$F1 571

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
774 780 0.03659 TCAAGCACAGCTGCCATGTA 59.963 50.0 15.27 0.0 45.53 2.29 F
775 781 1.10051 CAAGCACAGCTGCCATGTAT 58.899 50.0 15.27 0.0 45.53 2.29 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1604 1880 1.149133 ACCAAGCCCTCCAAATCCCT 61.149 55.000 0.0 0.0 0.00 4.20 R
2624 2992 2.143122 TGTTTCGCTCACTAGCCAAAG 58.857 47.619 0.0 0.0 46.68 2.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
519 525 1.153524 TTCATGGTGGCTGCTTGGT 59.846 52.632 0.00 0.00 0.00 3.67
737 743 2.288886 GGTCTACCGAAGCAGAAGTGTT 60.289 50.000 0.00 0.00 0.00 3.32
738 744 3.391049 GTCTACCGAAGCAGAAGTGTTT 58.609 45.455 0.00 0.00 0.00 2.83
739 745 3.429207 GTCTACCGAAGCAGAAGTGTTTC 59.571 47.826 0.00 0.00 39.77 2.78
740 746 1.594331 ACCGAAGCAGAAGTGTTTCC 58.406 50.000 0.00 0.00 39.97 3.13
741 747 1.141053 ACCGAAGCAGAAGTGTTTCCT 59.859 47.619 0.00 0.00 39.97 3.36
742 748 2.222027 CCGAAGCAGAAGTGTTTCCTT 58.778 47.619 0.00 0.00 39.97 3.36
743 749 2.618709 CCGAAGCAGAAGTGTTTCCTTT 59.381 45.455 0.00 0.00 39.97 3.11
744 750 3.066760 CCGAAGCAGAAGTGTTTCCTTTT 59.933 43.478 0.00 0.00 39.97 2.27
745 751 4.274950 CCGAAGCAGAAGTGTTTCCTTTTA 59.725 41.667 0.00 0.00 39.97 1.52
746 752 5.205565 CGAAGCAGAAGTGTTTCCTTTTAC 58.794 41.667 0.00 0.00 39.97 2.01
747 753 5.007724 CGAAGCAGAAGTGTTTCCTTTTACT 59.992 40.000 0.00 0.00 39.97 2.24
748 754 6.458342 CGAAGCAGAAGTGTTTCCTTTTACTT 60.458 38.462 0.00 0.00 39.97 2.24
749 755 6.378710 AGCAGAAGTGTTTCCTTTTACTTC 57.621 37.500 0.00 0.00 45.73 3.01
750 756 5.299531 AGCAGAAGTGTTTCCTTTTACTTCC 59.700 40.000 11.15 0.04 46.25 3.46
751 757 5.507482 GCAGAAGTGTTTCCTTTTACTTCCC 60.507 44.000 11.15 1.88 46.25 3.97
752 758 5.828328 CAGAAGTGTTTCCTTTTACTTCCCT 59.172 40.000 11.15 0.00 46.25 4.20
753 759 6.321435 CAGAAGTGTTTCCTTTTACTTCCCTT 59.679 38.462 11.15 0.00 46.25 3.95
754 760 6.895756 AGAAGTGTTTCCTTTTACTTCCCTTT 59.104 34.615 11.15 0.00 46.25 3.11
755 761 7.399191 AGAAGTGTTTCCTTTTACTTCCCTTTT 59.601 33.333 11.15 0.00 46.25 2.27
756 762 7.108841 AGTGTTTCCTTTTACTTCCCTTTTC 57.891 36.000 0.00 0.00 0.00 2.29
757 763 6.666113 AGTGTTTCCTTTTACTTCCCTTTTCA 59.334 34.615 0.00 0.00 0.00 2.69
758 764 7.179516 AGTGTTTCCTTTTACTTCCCTTTTCAA 59.820 33.333 0.00 0.00 0.00 2.69
759 765 7.491372 GTGTTTCCTTTTACTTCCCTTTTCAAG 59.509 37.037 0.00 0.00 0.00 3.02
760 766 5.784578 TCCTTTTACTTCCCTTTTCAAGC 57.215 39.130 0.00 0.00 0.00 4.01
761 767 5.205056 TCCTTTTACTTCCCTTTTCAAGCA 58.795 37.500 0.00 0.00 0.00 3.91
762 768 5.068591 TCCTTTTACTTCCCTTTTCAAGCAC 59.931 40.000 0.00 0.00 0.00 4.40
763 769 5.163457 CCTTTTACTTCCCTTTTCAAGCACA 60.163 40.000 0.00 0.00 0.00 4.57
764 770 5.514274 TTTACTTCCCTTTTCAAGCACAG 57.486 39.130 0.00 0.00 0.00 3.66
765 771 1.683385 ACTTCCCTTTTCAAGCACAGC 59.317 47.619 0.00 0.00 0.00 4.40
766 772 1.959282 CTTCCCTTTTCAAGCACAGCT 59.041 47.619 0.00 0.00 42.56 4.24
767 773 1.321474 TCCCTTTTCAAGCACAGCTG 58.679 50.000 13.48 13.48 39.62 4.24
768 774 0.319297 CCCTTTTCAAGCACAGCTGC 60.319 55.000 15.27 0.57 44.63 5.25
769 775 0.319297 CCTTTTCAAGCACAGCTGCC 60.319 55.000 15.27 5.10 45.53 4.85
770 776 0.386476 CTTTTCAAGCACAGCTGCCA 59.614 50.000 15.27 0.00 45.53 4.92
771 777 1.000506 CTTTTCAAGCACAGCTGCCAT 59.999 47.619 15.27 0.00 45.53 4.40
772 778 0.315886 TTTCAAGCACAGCTGCCATG 59.684 50.000 15.27 8.70 45.53 3.66
773 779 0.824595 TTCAAGCACAGCTGCCATGT 60.825 50.000 15.27 0.00 45.53 3.21
774 780 0.036590 TCAAGCACAGCTGCCATGTA 59.963 50.000 15.27 0.00 45.53 2.29
775 781 1.100510 CAAGCACAGCTGCCATGTAT 58.899 50.000 15.27 0.00 45.53 2.29
776 782 1.475280 CAAGCACAGCTGCCATGTATT 59.525 47.619 15.27 1.91 45.53 1.89
777 783 2.684374 CAAGCACAGCTGCCATGTATTA 59.316 45.455 15.27 0.00 45.53 0.98
778 784 3.003394 AGCACAGCTGCCATGTATTAA 57.997 42.857 15.27 0.00 45.53 1.40
779 785 2.947652 AGCACAGCTGCCATGTATTAAG 59.052 45.455 15.27 0.00 45.53 1.85
780 786 2.684881 GCACAGCTGCCATGTATTAAGT 59.315 45.455 15.27 0.00 37.45 2.24
781 787 3.242870 GCACAGCTGCCATGTATTAAGTC 60.243 47.826 15.27 0.00 37.45 3.01
782 788 3.001634 CACAGCTGCCATGTATTAAGTCG 59.998 47.826 15.27 0.00 0.00 4.18
783 789 3.118775 ACAGCTGCCATGTATTAAGTCGA 60.119 43.478 15.27 0.00 0.00 4.20
784 790 4.060900 CAGCTGCCATGTATTAAGTCGAT 58.939 43.478 0.00 0.00 0.00 3.59
785 791 4.512944 CAGCTGCCATGTATTAAGTCGATT 59.487 41.667 0.00 0.00 0.00 3.34
786 792 4.752101 AGCTGCCATGTATTAAGTCGATTC 59.248 41.667 0.00 0.00 0.00 2.52
787 793 4.511454 GCTGCCATGTATTAAGTCGATTCA 59.489 41.667 0.00 0.00 0.00 2.57
788 794 5.007626 GCTGCCATGTATTAAGTCGATTCAA 59.992 40.000 0.00 0.00 0.00 2.69
789 795 6.458206 GCTGCCATGTATTAAGTCGATTCAAA 60.458 38.462 0.00 0.00 0.00 2.69
790 796 7.015226 TGCCATGTATTAAGTCGATTCAAAG 57.985 36.000 0.00 0.00 0.00 2.77
791 797 6.038161 TGCCATGTATTAAGTCGATTCAAAGG 59.962 38.462 0.00 0.00 0.00 3.11
792 798 6.513393 GCCATGTATTAAGTCGATTCAAAGGG 60.513 42.308 0.00 0.00 0.00 3.95
793 799 6.430451 CATGTATTAAGTCGATTCAAAGGGC 58.570 40.000 0.00 0.00 0.00 5.19
794 800 5.741011 TGTATTAAGTCGATTCAAAGGGCT 58.259 37.500 0.00 0.00 0.00 5.19
795 801 5.584649 TGTATTAAGTCGATTCAAAGGGCTG 59.415 40.000 0.00 0.00 0.00 4.85
796 802 2.859165 AAGTCGATTCAAAGGGCTGA 57.141 45.000 0.00 0.00 0.00 4.26
797 803 3.356529 AAGTCGATTCAAAGGGCTGAT 57.643 42.857 0.00 0.00 0.00 2.90
798 804 3.356529 AGTCGATTCAAAGGGCTGATT 57.643 42.857 0.00 0.00 0.00 2.57
799 805 3.690460 AGTCGATTCAAAGGGCTGATTT 58.310 40.909 0.00 0.00 0.00 2.17
800 806 4.082125 AGTCGATTCAAAGGGCTGATTTT 58.918 39.130 0.00 0.00 0.00 1.82
801 807 4.082571 AGTCGATTCAAAGGGCTGATTTTG 60.083 41.667 0.00 0.00 36.00 2.44
802 808 4.078537 TCGATTCAAAGGGCTGATTTTGA 58.921 39.130 0.00 0.00 40.46 2.69
803 809 4.156556 TCGATTCAAAGGGCTGATTTTGAG 59.843 41.667 0.73 0.00 42.35 3.02
804 810 4.082571 CGATTCAAAGGGCTGATTTTGAGT 60.083 41.667 0.73 0.00 42.35 3.41
805 811 4.589216 TTCAAAGGGCTGATTTTGAGTG 57.411 40.909 0.73 0.00 42.35 3.51
806 812 2.892852 TCAAAGGGCTGATTTTGAGTGG 59.107 45.455 0.00 0.00 38.12 4.00
807 813 2.629617 CAAAGGGCTGATTTTGAGTGGT 59.370 45.455 0.00 0.00 36.61 4.16
808 814 2.683211 AGGGCTGATTTTGAGTGGTT 57.317 45.000 0.00 0.00 0.00 3.67
809 815 2.962859 AGGGCTGATTTTGAGTGGTTT 58.037 42.857 0.00 0.00 0.00 3.27
810 816 2.893489 AGGGCTGATTTTGAGTGGTTTC 59.107 45.455 0.00 0.00 0.00 2.78
811 817 2.627699 GGGCTGATTTTGAGTGGTTTCA 59.372 45.455 0.00 0.00 0.00 2.69
812 818 3.069443 GGGCTGATTTTGAGTGGTTTCAA 59.931 43.478 0.00 0.00 35.38 2.69
813 819 4.262592 GGGCTGATTTTGAGTGGTTTCAAT 60.263 41.667 0.00 0.00 36.97 2.57
814 820 5.299949 GGCTGATTTTGAGTGGTTTCAATT 58.700 37.500 0.00 0.00 36.97 2.32
815 821 5.406477 GGCTGATTTTGAGTGGTTTCAATTC 59.594 40.000 0.00 0.00 36.97 2.17
816 822 5.984926 GCTGATTTTGAGTGGTTTCAATTCA 59.015 36.000 0.00 0.00 36.97 2.57
817 823 6.479660 GCTGATTTTGAGTGGTTTCAATTCAA 59.520 34.615 0.00 0.00 36.97 2.69
833 839 1.753930 TCAACATGGCAGATGCGATT 58.246 45.000 0.00 0.00 43.26 3.34
841 847 1.286501 GCAGATGCGATTAACGGACA 58.713 50.000 0.00 0.00 46.19 4.02
886 892 6.127730 ACAACCAGAAAACGAAAATTCAGTCT 60.128 34.615 0.00 0.00 0.00 3.24
887 893 5.821204 ACCAGAAAACGAAAATTCAGTCTG 58.179 37.500 0.00 0.00 0.00 3.51
890 896 4.887655 AGAAAACGAAAATTCAGTCTGGGT 59.112 37.500 0.00 0.00 0.00 4.51
891 897 4.568152 AAACGAAAATTCAGTCTGGGTG 57.432 40.909 0.00 0.00 0.00 4.61
892 898 3.208747 ACGAAAATTCAGTCTGGGTGT 57.791 42.857 0.00 0.00 0.00 4.16
893 899 2.878406 ACGAAAATTCAGTCTGGGTGTG 59.122 45.455 0.00 0.00 0.00 3.82
944 950 9.862149 AAAAGTGATTTAAGTTCTTTCCTCCTA 57.138 29.630 0.00 0.00 0.00 2.94
1098 1110 3.851105 GCAAGTACAAGCTGCTGAAACAG 60.851 47.826 1.35 0.00 40.80 3.16
1367 1379 1.164041 AACACTCGGCAAAAGGTCGG 61.164 55.000 0.00 0.00 46.81 4.79
1798 2074 4.079269 TGGAAATATGGGCAGAGGATGAAA 60.079 41.667 0.00 0.00 0.00 2.69
1840 2116 8.568617 ACAATTCCTTATGGATAAGAGGTACT 57.431 34.615 7.81 0.00 42.46 2.73
1885 2180 7.648039 ACCCAAAGTTACTTGTATTGTTTGA 57.352 32.000 0.00 0.00 0.00 2.69
2177 2540 7.595819 TTCAATGTTCCACTGATAAAGGTTT 57.404 32.000 0.00 0.00 0.00 3.27
2377 2741 7.882791 TGTTATTAGATGTGCTCTTCCTGAAAA 59.117 33.333 0.00 0.00 35.28 2.29
2378 2742 8.897752 GTTATTAGATGTGCTCTTCCTGAAAAT 58.102 33.333 0.00 0.00 35.28 1.82
2624 2992 8.585881 TCTTACAATTGTGACTATATCTAGCCC 58.414 37.037 21.42 0.00 0.00 5.19
2896 3264 6.531503 GGAAATATCCAGATAGGTCGATGA 57.468 41.667 0.00 0.00 45.79 2.92
2897 3265 7.118496 GGAAATATCCAGATAGGTCGATGAT 57.882 40.000 0.00 0.00 45.79 2.45
2898 3266 6.983307 GGAAATATCCAGATAGGTCGATGATG 59.017 42.308 0.00 0.00 45.79 3.07
2899 3267 7.147828 GGAAATATCCAGATAGGTCGATGATGA 60.148 40.741 0.00 0.00 45.79 2.92
2900 3268 7.724490 AATATCCAGATAGGTCGATGATGAA 57.276 36.000 0.00 0.00 39.02 2.57
2901 3269 7.911130 ATATCCAGATAGGTCGATGATGAAT 57.089 36.000 0.00 0.00 39.02 2.57
2902 3270 5.651387 TCCAGATAGGTCGATGATGAATC 57.349 43.478 0.00 0.00 39.02 2.52
2903 3271 5.328565 TCCAGATAGGTCGATGATGAATCT 58.671 41.667 0.00 0.00 39.02 2.40
2904 3272 5.777223 TCCAGATAGGTCGATGATGAATCTT 59.223 40.000 0.00 0.00 39.02 2.40
2905 3273 6.268617 TCCAGATAGGTCGATGATGAATCTTT 59.731 38.462 0.00 0.00 39.02 2.52
2906 3274 7.451566 TCCAGATAGGTCGATGATGAATCTTTA 59.548 37.037 0.00 0.00 39.02 1.85
2907 3275 7.758980 CCAGATAGGTCGATGATGAATCTTTAG 59.241 40.741 0.00 0.00 32.61 1.85
2908 3276 8.303156 CAGATAGGTCGATGATGAATCTTTAGT 58.697 37.037 0.00 0.00 32.61 2.24
2909 3277 8.865090 AGATAGGTCGATGATGAATCTTTAGTT 58.135 33.333 0.00 0.00 32.61 2.24
2910 3278 9.482627 GATAGGTCGATGATGAATCTTTAGTTT 57.517 33.333 0.00 0.00 32.61 2.66
2911 3279 9.838339 ATAGGTCGATGATGAATCTTTAGTTTT 57.162 29.630 0.00 0.00 32.61 2.43
2913 3281 9.838339 AGGTCGATGATGAATCTTTAGTTTTAT 57.162 29.630 0.00 0.00 32.61 1.40
2939 3307 9.630098 TTTTGAATTCTCTTGTGAAAGATATGC 57.370 29.630 7.05 0.00 0.00 3.14
2940 3308 7.008440 TGAATTCTCTTGTGAAAGATATGCG 57.992 36.000 7.05 0.00 0.00 4.73
2941 3309 5.998454 ATTCTCTTGTGAAAGATATGCGG 57.002 39.130 0.00 0.00 0.00 5.69
2942 3310 3.198068 TCTCTTGTGAAAGATATGCGGC 58.802 45.455 0.00 0.00 0.00 6.53
2943 3311 2.938451 CTCTTGTGAAAGATATGCGGCA 59.062 45.455 4.58 4.58 0.00 5.69
2944 3312 3.544684 TCTTGTGAAAGATATGCGGCAT 58.455 40.909 20.57 20.57 0.00 4.40
2945 3313 3.313249 TCTTGTGAAAGATATGCGGCATG 59.687 43.478 24.99 4.08 0.00 4.06
2946 3314 2.916640 TGTGAAAGATATGCGGCATGA 58.083 42.857 24.99 9.78 0.00 3.07
2947 3315 3.479489 TGTGAAAGATATGCGGCATGAT 58.521 40.909 24.99 13.85 0.00 2.45
2948 3316 3.251487 TGTGAAAGATATGCGGCATGATG 59.749 43.478 24.99 0.00 0.00 3.07
2949 3317 3.499537 GTGAAAGATATGCGGCATGATGA 59.500 43.478 24.99 5.64 0.00 2.92
2950 3318 3.499537 TGAAAGATATGCGGCATGATGAC 59.500 43.478 24.99 12.01 0.00 3.06
2951 3319 3.413846 AAGATATGCGGCATGATGACT 57.586 42.857 24.99 12.97 0.00 3.41
2952 3320 3.413846 AGATATGCGGCATGATGACTT 57.586 42.857 24.99 0.00 0.00 3.01
2953 3321 3.748083 AGATATGCGGCATGATGACTTT 58.252 40.909 24.99 0.00 0.00 2.66
2954 3322 4.139786 AGATATGCGGCATGATGACTTTT 58.860 39.130 24.99 0.00 0.00 2.27
2955 3323 2.857592 ATGCGGCATGATGACTTTTC 57.142 45.000 15.87 0.00 0.00 2.29
2956 3324 1.825090 TGCGGCATGATGACTTTTCT 58.175 45.000 0.00 0.00 0.00 2.52
2957 3325 2.984562 TGCGGCATGATGACTTTTCTA 58.015 42.857 0.00 0.00 0.00 2.10
2958 3326 2.938451 TGCGGCATGATGACTTTTCTAG 59.062 45.455 0.00 0.00 0.00 2.43
2959 3327 2.289002 GCGGCATGATGACTTTTCTAGG 59.711 50.000 0.00 0.00 0.00 3.02
2960 3328 3.797039 CGGCATGATGACTTTTCTAGGA 58.203 45.455 0.00 0.00 0.00 2.94
2961 3329 4.191544 CGGCATGATGACTTTTCTAGGAA 58.808 43.478 0.00 0.00 0.00 3.36
2962 3330 4.635765 CGGCATGATGACTTTTCTAGGAAA 59.364 41.667 0.00 0.00 0.00 3.13
2963 3331 5.123820 CGGCATGATGACTTTTCTAGGAAAA 59.876 40.000 0.00 5.52 0.00 2.29
2964 3332 6.325596 GGCATGATGACTTTTCTAGGAAAAC 58.674 40.000 0.00 0.00 0.00 2.43
2965 3333 6.071952 GGCATGATGACTTTTCTAGGAAAACA 60.072 38.462 0.00 2.04 0.00 2.83
2966 3334 7.370383 GCATGATGACTTTTCTAGGAAAACAA 58.630 34.615 0.00 0.00 0.00 2.83
2967 3335 8.031277 GCATGATGACTTTTCTAGGAAAACAAT 58.969 33.333 0.00 0.00 0.00 2.71
2968 3336 9.565213 CATGATGACTTTTCTAGGAAAACAATC 57.435 33.333 0.00 2.15 0.00 2.67
2969 3337 8.690203 TGATGACTTTTCTAGGAAAACAATCA 57.310 30.769 0.00 4.51 0.00 2.57
2970 3338 9.300681 TGATGACTTTTCTAGGAAAACAATCAT 57.699 29.630 14.96 14.96 0.00 2.45
2971 3339 9.565213 GATGACTTTTCTAGGAAAACAATCATG 57.435 33.333 17.49 0.00 0.00 3.07
2972 3340 7.885297 TGACTTTTCTAGGAAAACAATCATGG 58.115 34.615 0.00 0.00 0.00 3.66
2973 3341 7.039784 TGACTTTTCTAGGAAAACAATCATGGG 60.040 37.037 0.00 0.00 0.00 4.00
2974 3342 6.211384 ACTTTTCTAGGAAAACAATCATGGGG 59.789 38.462 0.00 0.00 0.00 4.96
2975 3343 4.946160 TCTAGGAAAACAATCATGGGGT 57.054 40.909 0.00 0.00 0.00 4.95
2976 3344 4.855340 TCTAGGAAAACAATCATGGGGTC 58.145 43.478 0.00 0.00 0.00 4.46
2977 3345 2.820178 AGGAAAACAATCATGGGGTCC 58.180 47.619 0.00 0.00 0.00 4.46
2978 3346 1.831106 GGAAAACAATCATGGGGTCCC 59.169 52.381 0.00 0.00 0.00 4.46
2987 3355 4.492232 TGGGGTCCCATGTAGTCC 57.508 61.111 10.98 0.00 41.89 3.85
2988 3356 1.794688 TGGGGTCCCATGTAGTCCT 59.205 57.895 10.98 0.00 41.89 3.85
2989 3357 1.020462 TGGGGTCCCATGTAGTCCTA 58.980 55.000 10.98 0.00 41.89 2.94
2990 3358 1.343681 TGGGGTCCCATGTAGTCCTAC 60.344 57.143 10.98 0.00 41.89 3.18
2991 3359 1.038280 GGGTCCCATGTAGTCCTACG 58.962 60.000 1.78 0.00 38.85 3.51
2992 3360 0.388294 GGTCCCATGTAGTCCTACGC 59.612 60.000 0.00 0.00 38.85 4.42
2993 3361 1.400737 GTCCCATGTAGTCCTACGCT 58.599 55.000 0.00 0.00 38.85 5.07
2994 3362 1.755380 GTCCCATGTAGTCCTACGCTT 59.245 52.381 0.00 0.00 38.85 4.68
2995 3363 1.754803 TCCCATGTAGTCCTACGCTTG 59.245 52.381 0.00 0.00 38.85 4.01
2996 3364 1.571919 CCATGTAGTCCTACGCTTGC 58.428 55.000 0.00 0.00 38.85 4.01
2997 3365 1.137086 CCATGTAGTCCTACGCTTGCT 59.863 52.381 0.00 0.00 38.85 3.91
2998 3366 2.418746 CCATGTAGTCCTACGCTTGCTT 60.419 50.000 0.00 0.00 38.85 3.91
2999 3367 3.262420 CATGTAGTCCTACGCTTGCTTT 58.738 45.455 0.38 0.00 38.85 3.51
3000 3368 4.430007 CATGTAGTCCTACGCTTGCTTTA 58.570 43.478 0.38 0.00 38.85 1.85
3001 3369 3.841643 TGTAGTCCTACGCTTGCTTTAC 58.158 45.455 0.38 0.00 38.85 2.01
3002 3370 3.256383 TGTAGTCCTACGCTTGCTTTACA 59.744 43.478 0.38 0.00 38.85 2.41
3003 3371 2.960819 AGTCCTACGCTTGCTTTACAG 58.039 47.619 0.00 0.00 0.00 2.74
3004 3372 2.299297 AGTCCTACGCTTGCTTTACAGT 59.701 45.455 0.00 0.00 0.00 3.55
3005 3373 3.064931 GTCCTACGCTTGCTTTACAGTT 58.935 45.455 0.00 0.00 0.00 3.16
3006 3374 3.064207 TCCTACGCTTGCTTTACAGTTG 58.936 45.455 0.00 0.00 0.00 3.16
3007 3375 3.064207 CCTACGCTTGCTTTACAGTTGA 58.936 45.455 0.00 0.00 0.00 3.18
3008 3376 3.123621 CCTACGCTTGCTTTACAGTTGAG 59.876 47.826 0.00 0.00 0.00 3.02
3009 3377 2.833794 ACGCTTGCTTTACAGTTGAGA 58.166 42.857 0.00 0.00 0.00 3.27
3010 3378 3.202906 ACGCTTGCTTTACAGTTGAGAA 58.797 40.909 0.00 0.00 0.00 2.87
3011 3379 3.815401 ACGCTTGCTTTACAGTTGAGAAT 59.185 39.130 0.00 0.00 0.00 2.40
3012 3380 4.083802 ACGCTTGCTTTACAGTTGAGAATC 60.084 41.667 0.00 0.00 0.00 2.52
3013 3381 4.398247 GCTTGCTTTACAGTTGAGAATCG 58.602 43.478 0.00 0.00 38.61 3.34
3014 3382 4.670221 GCTTGCTTTACAGTTGAGAATCGG 60.670 45.833 0.00 0.00 38.61 4.18
3015 3383 3.334691 TGCTTTACAGTTGAGAATCGGG 58.665 45.455 0.00 0.00 38.61 5.14
3016 3384 3.244422 TGCTTTACAGTTGAGAATCGGGT 60.244 43.478 0.00 0.00 38.61 5.28
3017 3385 3.125316 GCTTTACAGTTGAGAATCGGGTG 59.875 47.826 0.00 0.00 38.61 4.61
3018 3386 4.315803 CTTTACAGTTGAGAATCGGGTGT 58.684 43.478 0.00 0.00 38.61 4.16
3019 3387 2.169832 ACAGTTGAGAATCGGGTGTG 57.830 50.000 0.00 0.00 38.61 3.82
3020 3388 0.798776 CAGTTGAGAATCGGGTGTGC 59.201 55.000 0.00 0.00 38.61 4.57
3021 3389 0.396435 AGTTGAGAATCGGGTGTGCA 59.604 50.000 0.00 0.00 38.61 4.57
3022 3390 0.517316 GTTGAGAATCGGGTGTGCAC 59.483 55.000 10.75 10.75 38.61 4.57
3023 3391 0.107643 TTGAGAATCGGGTGTGCACA 59.892 50.000 17.42 17.42 38.61 4.57
3024 3392 0.602638 TGAGAATCGGGTGTGCACAC 60.603 55.000 36.56 36.56 41.84 3.82
3025 3393 3.249027 TGAGAATCGGGTGTGCACACA 62.249 52.381 41.69 27.37 43.50 3.72
3034 3402 1.586422 GTGTGCACACAGTCATCAGT 58.414 50.000 38.42 0.00 45.75 3.41
3035 3403 1.528586 GTGTGCACACAGTCATCAGTC 59.471 52.381 38.42 12.09 45.75 3.51
3036 3404 1.138661 TGTGCACACAGTCATCAGTCA 59.861 47.619 17.42 0.00 36.21 3.41
3037 3405 2.224354 TGTGCACACAGTCATCAGTCAT 60.224 45.455 17.42 0.00 36.21 3.06
3038 3406 2.414481 GTGCACACAGTCATCAGTCATC 59.586 50.000 13.17 0.00 0.00 2.92
3039 3407 2.301009 TGCACACAGTCATCAGTCATCT 59.699 45.455 0.00 0.00 0.00 2.90
3040 3408 2.928757 GCACACAGTCATCAGTCATCTC 59.071 50.000 0.00 0.00 0.00 2.75
3041 3409 3.519579 CACACAGTCATCAGTCATCTCC 58.480 50.000 0.00 0.00 0.00 3.71
3042 3410 3.056322 CACACAGTCATCAGTCATCTCCA 60.056 47.826 0.00 0.00 0.00 3.86
3043 3411 3.195182 ACACAGTCATCAGTCATCTCCAG 59.805 47.826 0.00 0.00 0.00 3.86
3044 3412 3.446516 CACAGTCATCAGTCATCTCCAGA 59.553 47.826 0.00 0.00 0.00 3.86
3045 3413 4.099727 CACAGTCATCAGTCATCTCCAGAT 59.900 45.833 0.00 0.00 34.56 2.90
3046 3414 4.341806 ACAGTCATCAGTCATCTCCAGATC 59.658 45.833 0.00 0.00 31.21 2.75
3047 3415 4.341520 CAGTCATCAGTCATCTCCAGATCA 59.658 45.833 0.00 0.00 31.21 2.92
3048 3416 4.585581 AGTCATCAGTCATCTCCAGATCAG 59.414 45.833 0.00 0.00 31.21 2.90
3049 3417 4.583907 GTCATCAGTCATCTCCAGATCAGA 59.416 45.833 0.00 0.00 31.21 3.27
3050 3418 5.244402 GTCATCAGTCATCTCCAGATCAGAT 59.756 44.000 0.00 0.00 31.21 2.90
3051 3419 5.477637 TCATCAGTCATCTCCAGATCAGATC 59.522 44.000 1.64 1.64 31.21 2.75
3052 3420 4.151121 TCAGTCATCTCCAGATCAGATCC 58.849 47.826 6.80 0.00 31.21 3.36
3053 3421 3.057386 CAGTCATCTCCAGATCAGATCCG 60.057 52.174 6.80 0.00 31.21 4.18
3054 3422 2.230992 GTCATCTCCAGATCAGATCCGG 59.769 54.545 6.34 6.34 31.21 5.14
3055 3423 2.108952 TCATCTCCAGATCAGATCCGGA 59.891 50.000 13.88 13.88 34.75 5.14
3057 3425 0.602562 CTCCAGATCAGATCCGGAGC 59.397 60.000 24.22 13.00 44.50 4.70
3058 3426 0.106015 TCCAGATCAGATCCGGAGCA 60.106 55.000 23.83 1.44 31.03 4.26
3059 3427 0.033228 CCAGATCAGATCCGGAGCAC 59.967 60.000 23.83 10.17 0.00 4.40
3060 3428 0.033228 CAGATCAGATCCGGAGCACC 59.967 60.000 23.83 7.49 0.00 5.01
3070 3438 3.429141 GGAGCACCGACGACGAGA 61.429 66.667 9.28 0.00 42.66 4.04
3071 3439 2.098680 GAGCACCGACGACGAGAG 59.901 66.667 9.28 0.00 42.66 3.20
3072 3440 2.358369 AGCACCGACGACGAGAGA 60.358 61.111 9.28 0.00 42.66 3.10
3073 3441 2.202324 GCACCGACGACGAGAGAC 60.202 66.667 9.28 0.00 42.66 3.36
3081 3449 4.315588 GACGAGAGACGAGGGGAA 57.684 61.111 0.00 0.00 45.77 3.97
3082 3450 2.564471 GACGAGAGACGAGGGGAAA 58.436 57.895 0.00 0.00 45.77 3.13
3083 3451 0.452585 GACGAGAGACGAGGGGAAAG 59.547 60.000 0.00 0.00 45.77 2.62
3084 3452 0.966370 ACGAGAGACGAGGGGAAAGG 60.966 60.000 0.00 0.00 45.77 3.11
3085 3453 1.518302 GAGAGACGAGGGGAAAGGC 59.482 63.158 0.00 0.00 0.00 4.35
3086 3454 1.229209 AGAGACGAGGGGAAAGGCA 60.229 57.895 0.00 0.00 0.00 4.75
3087 3455 0.836400 AGAGACGAGGGGAAAGGCAA 60.836 55.000 0.00 0.00 0.00 4.52
3088 3456 0.253327 GAGACGAGGGGAAAGGCAAT 59.747 55.000 0.00 0.00 0.00 3.56
3089 3457 0.253327 AGACGAGGGGAAAGGCAATC 59.747 55.000 0.00 0.00 0.00 2.67
3090 3458 0.035439 GACGAGGGGAAAGGCAATCA 60.035 55.000 0.00 0.00 0.00 2.57
3091 3459 0.404040 ACGAGGGGAAAGGCAATCAA 59.596 50.000 0.00 0.00 0.00 2.57
3092 3460 1.005924 ACGAGGGGAAAGGCAATCAAT 59.994 47.619 0.00 0.00 0.00 2.57
3093 3461 1.678101 CGAGGGGAAAGGCAATCAATC 59.322 52.381 0.00 0.00 0.00 2.67
3094 3462 2.034878 GAGGGGAAAGGCAATCAATCC 58.965 52.381 0.00 0.00 0.00 3.01
3096 3464 1.123077 GGGAAAGGCAATCAATCCCC 58.877 55.000 0.00 0.00 43.30 4.81
3097 3465 1.123077 GGAAAGGCAATCAATCCCCC 58.877 55.000 0.00 0.00 0.00 5.40
3098 3466 1.622173 GGAAAGGCAATCAATCCCCCA 60.622 52.381 0.00 0.00 0.00 4.96
3099 3467 1.482182 GAAAGGCAATCAATCCCCCAC 59.518 52.381 0.00 0.00 0.00 4.61
3100 3468 0.413037 AAGGCAATCAATCCCCCACA 59.587 50.000 0.00 0.00 0.00 4.17
3101 3469 0.638292 AGGCAATCAATCCCCCACAT 59.362 50.000 0.00 0.00 0.00 3.21
3102 3470 1.043022 GGCAATCAATCCCCCACATC 58.957 55.000 0.00 0.00 0.00 3.06
3103 3471 1.688942 GGCAATCAATCCCCCACATCA 60.689 52.381 0.00 0.00 0.00 3.07
3104 3472 1.684983 GCAATCAATCCCCCACATCAG 59.315 52.381 0.00 0.00 0.00 2.90
3105 3473 2.687614 GCAATCAATCCCCCACATCAGA 60.688 50.000 0.00 0.00 0.00 3.27
3106 3474 3.840991 CAATCAATCCCCCACATCAGAT 58.159 45.455 0.00 0.00 0.00 2.90
3107 3475 3.803186 ATCAATCCCCCACATCAGATC 57.197 47.619 0.00 0.00 0.00 2.75
3108 3476 2.780414 TCAATCCCCCACATCAGATCT 58.220 47.619 0.00 0.00 0.00 2.75
3109 3477 3.940335 TCAATCCCCCACATCAGATCTA 58.060 45.455 0.00 0.00 0.00 1.98
3110 3478 3.906218 TCAATCCCCCACATCAGATCTAG 59.094 47.826 0.00 0.00 0.00 2.43
3111 3479 3.906218 CAATCCCCCACATCAGATCTAGA 59.094 47.826 0.00 0.00 0.00 2.43
3112 3480 3.251016 TCCCCCACATCAGATCTAGAG 57.749 52.381 0.00 0.00 0.00 2.43
3113 3481 1.622811 CCCCCACATCAGATCTAGAGC 59.377 57.143 0.00 0.00 0.00 4.09
3114 3482 2.607499 CCCCACATCAGATCTAGAGCT 58.393 52.381 4.23 4.23 0.00 4.09
3115 3483 2.299582 CCCCACATCAGATCTAGAGCTG 59.700 54.545 28.30 28.30 45.52 4.24
3116 3484 2.288948 CCCACATCAGATCTAGAGCTGC 60.289 54.545 29.13 5.01 43.95 5.25
3117 3485 2.607526 CCACATCAGATCTAGAGCTGCG 60.608 54.545 29.13 23.82 43.95 5.18
3118 3486 1.000385 ACATCAGATCTAGAGCTGCGC 60.000 52.381 29.13 0.00 43.95 6.09
3119 3487 0.240678 ATCAGATCTAGAGCTGCGCG 59.759 55.000 29.13 9.67 43.95 6.86
3120 3488 1.098129 TCAGATCTAGAGCTGCGCGT 61.098 55.000 29.13 0.00 43.95 6.01
3121 3489 0.933973 CAGATCTAGAGCTGCGCGTG 60.934 60.000 23.96 1.64 38.05 5.34
3122 3490 2.279120 ATCTAGAGCTGCGCGTGC 60.279 61.111 15.48 15.48 43.20 5.34
3123 3491 3.781770 ATCTAGAGCTGCGCGTGCC 62.782 63.158 19.87 3.46 41.78 5.01
3134 3502 4.828925 GCGTGCCCTGAGCTCCTC 62.829 72.222 12.15 0.00 44.23 3.71
3135 3503 4.504916 CGTGCCCTGAGCTCCTCG 62.505 72.222 12.15 4.56 44.23 4.63
3136 3504 4.828925 GTGCCCTGAGCTCCTCGC 62.829 72.222 12.15 10.04 44.23 5.03
3160 3528 3.199551 CGGTGGTCGGGTCGAATA 58.800 61.111 0.00 0.00 37.72 1.75
3161 3529 1.737816 CGGTGGTCGGGTCGAATAT 59.262 57.895 0.00 0.00 37.72 1.28
3162 3530 0.318445 CGGTGGTCGGGTCGAATATC 60.318 60.000 0.00 0.00 37.72 1.63
3163 3531 0.033090 GGTGGTCGGGTCGAATATCC 59.967 60.000 0.00 0.00 37.72 2.59
3164 3532 0.033090 GTGGTCGGGTCGAATATCCC 59.967 60.000 0.00 0.00 37.72 3.85
3165 3533 0.105862 TGGTCGGGTCGAATATCCCT 60.106 55.000 7.20 0.00 41.40 4.20
3166 3534 1.046204 GGTCGGGTCGAATATCCCTT 58.954 55.000 7.20 0.00 41.40 3.95
3167 3535 1.000618 GGTCGGGTCGAATATCCCTTC 59.999 57.143 7.20 0.71 41.40 3.46
3168 3536 1.684983 GTCGGGTCGAATATCCCTTCA 59.315 52.381 7.20 0.00 41.40 3.02
3169 3537 2.299297 GTCGGGTCGAATATCCCTTCAT 59.701 50.000 7.20 0.00 41.40 2.57
3170 3538 2.969950 TCGGGTCGAATATCCCTTCATT 59.030 45.455 7.20 0.00 41.40 2.57
3171 3539 3.006537 TCGGGTCGAATATCCCTTCATTC 59.993 47.826 7.20 0.00 41.40 2.67
3175 3543 3.045601 CGAATATCCCTTCATTCGGCT 57.954 47.619 8.44 0.00 46.06 5.52
3176 3544 4.188247 CGAATATCCCTTCATTCGGCTA 57.812 45.455 8.44 0.00 46.06 3.93
3177 3545 3.927142 CGAATATCCCTTCATTCGGCTAC 59.073 47.826 8.44 0.00 46.06 3.58
3178 3546 4.560716 CGAATATCCCTTCATTCGGCTACA 60.561 45.833 8.44 0.00 46.06 2.74
3179 3547 2.918712 ATCCCTTCATTCGGCTACAG 57.081 50.000 0.00 0.00 0.00 2.74
3180 3548 0.178068 TCCCTTCATTCGGCTACAGC 59.822 55.000 0.00 0.00 41.14 4.40
3181 3549 0.179000 CCCTTCATTCGGCTACAGCT 59.821 55.000 0.54 0.00 41.70 4.24
3182 3550 1.576356 CCTTCATTCGGCTACAGCTC 58.424 55.000 0.54 0.00 41.70 4.09
3183 3551 1.576356 CTTCATTCGGCTACAGCTCC 58.424 55.000 0.54 0.00 41.70 4.70
3184 3552 0.178068 TTCATTCGGCTACAGCTCCC 59.822 55.000 0.54 0.00 41.70 4.30
3185 3553 0.975556 TCATTCGGCTACAGCTCCCA 60.976 55.000 0.54 0.00 41.70 4.37
3186 3554 0.811616 CATTCGGCTACAGCTCCCAC 60.812 60.000 0.54 0.00 41.70 4.61
3187 3555 2.298158 ATTCGGCTACAGCTCCCACG 62.298 60.000 0.54 0.00 41.70 4.94
3188 3556 3.449227 CGGCTACAGCTCCCACGA 61.449 66.667 0.54 0.00 41.70 4.35
3189 3557 2.496817 GGCTACAGCTCCCACGAG 59.503 66.667 0.54 0.00 41.70 4.18
3235 3603 3.062466 CTCCGACGAGCTCCACCA 61.062 66.667 8.47 0.00 0.00 4.17
3236 3604 3.057547 CTCCGACGAGCTCCACCAG 62.058 68.421 8.47 0.00 0.00 4.00
3259 3627 4.388499 GGCGGCGGTGAAAGAGGA 62.388 66.667 9.78 0.00 0.00 3.71
3260 3628 2.125106 GCGGCGGTGAAAGAGGAT 60.125 61.111 9.78 0.00 0.00 3.24
3261 3629 1.745489 GCGGCGGTGAAAGAGGATT 60.745 57.895 9.78 0.00 0.00 3.01
3262 3630 1.305930 GCGGCGGTGAAAGAGGATTT 61.306 55.000 9.78 0.00 0.00 2.17
3263 3631 0.447801 CGGCGGTGAAAGAGGATTTG 59.552 55.000 0.00 0.00 0.00 2.32
3264 3632 0.171231 GGCGGTGAAAGAGGATTTGC 59.829 55.000 0.00 0.00 0.00 3.68
3265 3633 0.881118 GCGGTGAAAGAGGATTTGCA 59.119 50.000 0.00 0.00 0.00 4.08
3266 3634 1.474077 GCGGTGAAAGAGGATTTGCAT 59.526 47.619 0.00 0.00 0.00 3.96
3267 3635 2.478539 GCGGTGAAAGAGGATTTGCATC 60.479 50.000 0.00 0.00 0.00 3.91
3268 3636 2.749076 CGGTGAAAGAGGATTTGCATCA 59.251 45.455 0.00 0.00 0.00 3.07
3269 3637 3.181503 CGGTGAAAGAGGATTTGCATCAG 60.182 47.826 0.00 0.00 0.00 2.90
3270 3638 4.012374 GGTGAAAGAGGATTTGCATCAGA 58.988 43.478 0.00 0.00 0.00 3.27
3271 3639 4.096081 GGTGAAAGAGGATTTGCATCAGAG 59.904 45.833 0.00 0.00 0.00 3.35
3272 3640 4.699257 GTGAAAGAGGATTTGCATCAGAGT 59.301 41.667 0.00 0.00 0.00 3.24
3273 3641 5.877012 GTGAAAGAGGATTTGCATCAGAGTA 59.123 40.000 0.00 0.00 0.00 2.59
3274 3642 6.541641 GTGAAAGAGGATTTGCATCAGAGTAT 59.458 38.462 0.00 0.00 0.00 2.12
3275 3643 6.765036 TGAAAGAGGATTTGCATCAGAGTATC 59.235 38.462 0.00 0.00 0.00 2.24
3276 3644 5.226194 AGAGGATTTGCATCAGAGTATCC 57.774 43.478 0.00 0.00 33.66 2.59
3277 3645 3.993081 GAGGATTTGCATCAGAGTATCCG 59.007 47.826 0.00 0.00 37.28 4.18
3278 3646 3.643320 AGGATTTGCATCAGAGTATCCGA 59.357 43.478 0.00 0.00 37.28 4.55
3279 3647 3.743396 GGATTTGCATCAGAGTATCCGAC 59.257 47.826 0.00 0.00 33.66 4.79
3280 3648 3.885724 TTTGCATCAGAGTATCCGACA 57.114 42.857 0.00 0.00 33.66 4.35
3281 3649 3.443099 TTGCATCAGAGTATCCGACAG 57.557 47.619 0.00 0.00 33.66 3.51
3282 3650 2.379005 TGCATCAGAGTATCCGACAGT 58.621 47.619 0.00 0.00 33.66 3.55
3283 3651 2.760650 TGCATCAGAGTATCCGACAGTT 59.239 45.455 0.00 0.00 33.66 3.16
3284 3652 3.119291 GCATCAGAGTATCCGACAGTTG 58.881 50.000 0.00 0.00 33.66 3.16
3285 3653 3.711086 CATCAGAGTATCCGACAGTTGG 58.289 50.000 0.00 0.00 33.66 3.77
3286 3654 2.100197 TCAGAGTATCCGACAGTTGGG 58.900 52.381 7.02 0.00 33.66 4.12
3287 3655 2.100197 CAGAGTATCCGACAGTTGGGA 58.900 52.381 7.02 1.81 33.66 4.37
3288 3656 2.695666 CAGAGTATCCGACAGTTGGGAT 59.304 50.000 7.02 9.31 44.92 3.85
3289 3657 2.959707 AGAGTATCCGACAGTTGGGATC 59.040 50.000 7.02 0.94 42.01 3.36
3290 3658 2.036089 GAGTATCCGACAGTTGGGATCC 59.964 54.545 1.92 1.92 42.01 3.36
3291 3659 1.037493 TATCCGACAGTTGGGATCCG 58.963 55.000 5.45 0.00 42.01 4.18
3292 3660 0.686441 ATCCGACAGTTGGGATCCGA 60.686 55.000 5.45 0.00 38.70 4.55
3293 3661 0.686441 TCCGACAGTTGGGATCCGAT 60.686 55.000 5.45 0.00 0.00 4.18
3294 3662 0.178068 CCGACAGTTGGGATCCGATT 59.822 55.000 5.45 0.00 0.00 3.34
3295 3663 1.290203 CGACAGTTGGGATCCGATTG 58.710 55.000 5.45 6.68 31.85 2.67
3296 3664 1.668419 GACAGTTGGGATCCGATTGG 58.332 55.000 5.45 0.00 30.07 3.16
3297 3665 0.991920 ACAGTTGGGATCCGATTGGT 59.008 50.000 5.45 0.00 36.30 3.67
3298 3666 1.354368 ACAGTTGGGATCCGATTGGTT 59.646 47.619 5.45 0.00 36.30 3.67
3299 3667 2.225017 ACAGTTGGGATCCGATTGGTTT 60.225 45.455 5.45 0.00 36.30 3.27
3300 3668 2.825532 CAGTTGGGATCCGATTGGTTTT 59.174 45.455 5.45 0.00 36.30 2.43
3301 3669 2.825532 AGTTGGGATCCGATTGGTTTTG 59.174 45.455 5.45 0.00 36.30 2.44
3302 3670 1.846007 TGGGATCCGATTGGTTTTGG 58.154 50.000 5.45 0.00 36.30 3.28
3303 3671 0.459899 GGGATCCGATTGGTTTTGGC 59.540 55.000 5.45 0.00 36.30 4.52
3304 3672 1.474330 GGATCCGATTGGTTTTGGCT 58.526 50.000 0.00 0.00 36.30 4.75
3305 3673 2.650322 GGATCCGATTGGTTTTGGCTA 58.350 47.619 0.00 0.00 36.30 3.93
3306 3674 2.618709 GGATCCGATTGGTTTTGGCTAG 59.381 50.000 0.00 0.00 36.30 3.42
3307 3675 2.871096 TCCGATTGGTTTTGGCTAGT 57.129 45.000 0.00 0.00 36.30 2.57
3308 3676 2.706890 TCCGATTGGTTTTGGCTAGTC 58.293 47.619 0.00 0.00 36.30 2.59
3309 3677 1.396996 CCGATTGGTTTTGGCTAGTCG 59.603 52.381 0.00 0.00 0.00 4.18
3310 3678 1.202031 CGATTGGTTTTGGCTAGTCGC 60.202 52.381 0.00 0.00 38.13 5.19
3311 3679 2.084546 GATTGGTTTTGGCTAGTCGCT 58.915 47.619 0.00 0.00 39.13 4.93
3312 3680 1.975660 TTGGTTTTGGCTAGTCGCTT 58.024 45.000 0.00 0.00 39.13 4.68
3313 3681 1.234821 TGGTTTTGGCTAGTCGCTTG 58.765 50.000 0.00 0.00 39.13 4.01
3314 3682 0.109735 GGTTTTGGCTAGTCGCTTGC 60.110 55.000 5.12 5.12 39.13 4.01
3315 3683 0.452784 GTTTTGGCTAGTCGCTTGCG 60.453 55.000 8.87 8.87 39.13 4.85
3316 3684 0.882927 TTTTGGCTAGTCGCTTGCGT 60.883 50.000 14.70 0.00 39.13 5.24
3317 3685 1.289109 TTTGGCTAGTCGCTTGCGTC 61.289 55.000 14.70 9.41 39.13 5.19
3318 3686 3.248171 GGCTAGTCGCTTGCGTCG 61.248 66.667 14.70 3.63 39.13 5.12
3319 3687 2.202440 GCTAGTCGCTTGCGTCGA 60.202 61.111 14.70 5.02 35.14 4.20
3320 3688 1.586564 GCTAGTCGCTTGCGTCGAT 60.587 57.895 14.70 2.72 38.29 3.59
3321 3689 1.140407 GCTAGTCGCTTGCGTCGATT 61.140 55.000 14.70 0.00 38.29 3.34
3322 3690 0.840729 CTAGTCGCTTGCGTCGATTC 59.159 55.000 14.70 1.18 38.29 2.52
3323 3691 0.169451 TAGTCGCTTGCGTCGATTCA 59.831 50.000 14.70 0.00 38.29 2.57
3324 3692 0.458543 AGTCGCTTGCGTCGATTCAT 60.459 50.000 14.70 0.00 38.29 2.57
3325 3693 0.314578 GTCGCTTGCGTCGATTCATG 60.315 55.000 14.70 0.00 38.29 3.07
3326 3694 1.011904 CGCTTGCGTCGATTCATGG 60.012 57.895 6.86 0.00 0.00 3.66
3327 3695 1.695893 CGCTTGCGTCGATTCATGGT 61.696 55.000 6.86 0.00 0.00 3.55
3328 3696 0.447801 GCTTGCGTCGATTCATGGTT 59.552 50.000 0.00 0.00 0.00 3.67
3329 3697 1.529826 GCTTGCGTCGATTCATGGTTC 60.530 52.381 0.00 0.00 0.00 3.62
3330 3698 1.731709 CTTGCGTCGATTCATGGTTCA 59.268 47.619 0.00 0.00 0.00 3.18
3331 3699 1.358877 TGCGTCGATTCATGGTTCAG 58.641 50.000 0.00 0.00 0.00 3.02
3332 3700 0.652592 GCGTCGATTCATGGTTCAGG 59.347 55.000 0.00 0.00 0.00 3.86
3333 3701 2.007049 GCGTCGATTCATGGTTCAGGT 61.007 52.381 0.00 0.00 0.00 4.00
3334 3702 2.346803 CGTCGATTCATGGTTCAGGTT 58.653 47.619 0.00 0.00 0.00 3.50
3335 3703 2.348666 CGTCGATTCATGGTTCAGGTTC 59.651 50.000 0.00 0.00 0.00 3.62
3336 3704 2.348666 GTCGATTCATGGTTCAGGTTCG 59.651 50.000 0.00 0.00 0.00 3.95
3337 3705 2.232696 TCGATTCATGGTTCAGGTTCGA 59.767 45.455 0.00 0.00 32.51 3.71
3338 3706 3.118775 TCGATTCATGGTTCAGGTTCGAT 60.119 43.478 0.00 0.00 31.12 3.59
3339 3707 3.623060 CGATTCATGGTTCAGGTTCGATT 59.377 43.478 0.00 0.00 29.42 3.34
3340 3708 4.260375 CGATTCATGGTTCAGGTTCGATTC 60.260 45.833 0.00 0.00 29.42 2.52
3341 3709 2.985896 TCATGGTTCAGGTTCGATTCC 58.014 47.619 0.00 0.00 0.00 3.01
3342 3710 2.304470 TCATGGTTCAGGTTCGATTCCA 59.696 45.455 9.32 0.00 0.00 3.53
3343 3711 2.178912 TGGTTCAGGTTCGATTCCAC 57.821 50.000 9.32 0.00 0.00 4.02
3344 3712 1.697432 TGGTTCAGGTTCGATTCCACT 59.303 47.619 9.32 0.00 0.00 4.00
3345 3713 2.105821 TGGTTCAGGTTCGATTCCACTT 59.894 45.455 9.32 0.00 0.00 3.16
3346 3714 2.742589 GGTTCAGGTTCGATTCCACTTC 59.257 50.000 9.32 0.00 0.00 3.01
3347 3715 2.742589 GTTCAGGTTCGATTCCACTTCC 59.257 50.000 9.32 0.00 0.00 3.46
3348 3716 2.257207 TCAGGTTCGATTCCACTTCCT 58.743 47.619 9.32 0.00 0.00 3.36
3349 3717 2.637872 TCAGGTTCGATTCCACTTCCTT 59.362 45.455 9.32 0.00 0.00 3.36
3350 3718 3.072476 TCAGGTTCGATTCCACTTCCTTT 59.928 43.478 9.32 0.00 0.00 3.11
3351 3719 3.821033 CAGGTTCGATTCCACTTCCTTTT 59.179 43.478 9.32 0.00 0.00 2.27
3352 3720 4.278419 CAGGTTCGATTCCACTTCCTTTTT 59.722 41.667 9.32 0.00 0.00 1.94
3353 3721 4.519350 AGGTTCGATTCCACTTCCTTTTTC 59.481 41.667 9.32 0.00 0.00 2.29
3354 3722 4.519350 GGTTCGATTCCACTTCCTTTTTCT 59.481 41.667 0.00 0.00 0.00 2.52
3355 3723 5.009710 GGTTCGATTCCACTTCCTTTTTCTT 59.990 40.000 0.00 0.00 0.00 2.52
3356 3724 6.461092 GGTTCGATTCCACTTCCTTTTTCTTT 60.461 38.462 0.00 0.00 0.00 2.52
3357 3725 6.709018 TCGATTCCACTTCCTTTTTCTTTT 57.291 33.333 0.00 0.00 0.00 2.27
3358 3726 7.107639 TCGATTCCACTTCCTTTTTCTTTTT 57.892 32.000 0.00 0.00 0.00 1.94
3359 3727 7.200455 TCGATTCCACTTCCTTTTTCTTTTTC 58.800 34.615 0.00 0.00 0.00 2.29
3360 3728 6.978080 CGATTCCACTTCCTTTTTCTTTTTCA 59.022 34.615 0.00 0.00 0.00 2.69
3361 3729 7.491048 CGATTCCACTTCCTTTTTCTTTTTCAA 59.509 33.333 0.00 0.00 0.00 2.69
3362 3730 8.722480 ATTCCACTTCCTTTTTCTTTTTCAAG 57.278 30.769 0.00 0.00 0.00 3.02
3363 3731 6.106003 TCCACTTCCTTTTTCTTTTTCAAGC 58.894 36.000 0.00 0.00 0.00 4.01
3364 3732 5.874261 CCACTTCCTTTTTCTTTTTCAAGCA 59.126 36.000 0.00 0.00 0.00 3.91
3365 3733 6.183360 CCACTTCCTTTTTCTTTTTCAAGCAC 60.183 38.462 0.00 0.00 0.00 4.40
3366 3734 6.591448 CACTTCCTTTTTCTTTTTCAAGCACT 59.409 34.615 0.00 0.00 0.00 4.40
3367 3735 6.591448 ACTTCCTTTTTCTTTTTCAAGCACTG 59.409 34.615 0.00 0.00 0.00 3.66
3368 3736 4.869861 TCCTTTTTCTTTTTCAAGCACTGC 59.130 37.500 0.00 0.00 0.00 4.40
3369 3737 4.872124 CCTTTTTCTTTTTCAAGCACTGCT 59.128 37.500 0.00 0.00 42.56 4.24
3380 3748 2.918712 AGCACTGCTTGTTAGACTGT 57.081 45.000 0.00 0.00 33.89 3.55
3382 3750 4.543590 AGCACTGCTTGTTAGACTGTAT 57.456 40.909 0.00 0.00 33.89 2.29
3383 3751 5.661056 AGCACTGCTTGTTAGACTGTATA 57.339 39.130 0.00 0.00 33.89 1.47
3384 3752 6.227298 AGCACTGCTTGTTAGACTGTATAT 57.773 37.500 0.00 0.00 33.89 0.86
3385 3753 7.348080 AGCACTGCTTGTTAGACTGTATATA 57.652 36.000 0.00 0.00 33.89 0.86
3386 3754 7.957002 AGCACTGCTTGTTAGACTGTATATAT 58.043 34.615 0.00 0.00 33.89 0.86
3387 3755 9.078990 AGCACTGCTTGTTAGACTGTATATATA 57.921 33.333 0.00 0.00 33.89 0.86
3388 3756 9.862371 GCACTGCTTGTTAGACTGTATATATAT 57.138 33.333 0.00 0.00 0.00 0.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
519 525 3.560481 TCGAACAAATGTAGCCACGAAAA 59.440 39.130 0.00 0.00 0.00 2.29
716 722 1.272769 ACACTTCTGCTTCGGTAGACC 59.727 52.381 0.00 0.00 36.46 3.85
737 743 5.659079 TGCTTGAAAAGGGAAGTAAAAGGAA 59.341 36.000 0.00 0.00 46.35 3.36
738 744 5.068591 GTGCTTGAAAAGGGAAGTAAAAGGA 59.931 40.000 0.00 0.00 46.35 3.36
739 745 5.163457 TGTGCTTGAAAAGGGAAGTAAAAGG 60.163 40.000 0.00 0.00 46.35 3.11
740 746 5.901552 TGTGCTTGAAAAGGGAAGTAAAAG 58.098 37.500 0.00 0.00 46.35 2.27
741 747 5.681179 GCTGTGCTTGAAAAGGGAAGTAAAA 60.681 40.000 0.00 0.00 46.35 1.52
742 748 4.202111 GCTGTGCTTGAAAAGGGAAGTAAA 60.202 41.667 0.00 0.00 46.35 2.01
743 749 3.317993 GCTGTGCTTGAAAAGGGAAGTAA 59.682 43.478 0.00 0.00 46.35 2.24
744 750 2.884639 GCTGTGCTTGAAAAGGGAAGTA 59.115 45.455 0.00 0.00 46.35 2.24
745 751 1.683385 GCTGTGCTTGAAAAGGGAAGT 59.317 47.619 0.00 0.00 46.35 3.01
746 752 1.959282 AGCTGTGCTTGAAAAGGGAAG 59.041 47.619 0.00 0.00 46.35 3.46
747 753 1.682854 CAGCTGTGCTTGAAAAGGGAA 59.317 47.619 5.25 0.00 46.35 3.97
748 754 1.321474 CAGCTGTGCTTGAAAAGGGA 58.679 50.000 5.25 0.00 46.35 4.20
749 755 0.319297 GCAGCTGTGCTTGAAAAGGG 60.319 55.000 16.64 0.00 46.35 3.95
750 756 3.190337 GCAGCTGTGCTTGAAAAGG 57.810 52.632 16.64 0.00 46.35 3.11
760 766 3.001634 CGACTTAATACATGGCAGCTGTG 59.998 47.826 16.64 8.48 0.00 3.66
761 767 3.118775 TCGACTTAATACATGGCAGCTGT 60.119 43.478 16.64 0.00 0.00 4.40
762 768 3.457234 TCGACTTAATACATGGCAGCTG 58.543 45.455 10.11 10.11 0.00 4.24
763 769 3.819564 TCGACTTAATACATGGCAGCT 57.180 42.857 0.00 0.00 0.00 4.24
764 770 4.511454 TGAATCGACTTAATACATGGCAGC 59.489 41.667 0.00 0.00 0.00 5.25
765 771 6.603237 TTGAATCGACTTAATACATGGCAG 57.397 37.500 0.00 0.00 0.00 4.85
766 772 6.038161 CCTTTGAATCGACTTAATACATGGCA 59.962 38.462 0.00 0.00 0.00 4.92
767 773 6.430451 CCTTTGAATCGACTTAATACATGGC 58.570 40.000 0.00 0.00 0.00 4.40
768 774 6.513393 GCCCTTTGAATCGACTTAATACATGG 60.513 42.308 0.00 0.00 0.00 3.66
769 775 6.260936 AGCCCTTTGAATCGACTTAATACATG 59.739 38.462 0.00 0.00 0.00 3.21
770 776 6.260936 CAGCCCTTTGAATCGACTTAATACAT 59.739 38.462 0.00 0.00 0.00 2.29
771 777 5.584649 CAGCCCTTTGAATCGACTTAATACA 59.415 40.000 0.00 0.00 0.00 2.29
772 778 5.815740 TCAGCCCTTTGAATCGACTTAATAC 59.184 40.000 0.00 0.00 0.00 1.89
773 779 5.984725 TCAGCCCTTTGAATCGACTTAATA 58.015 37.500 0.00 0.00 0.00 0.98
774 780 4.843728 TCAGCCCTTTGAATCGACTTAAT 58.156 39.130 0.00 0.00 0.00 1.40
775 781 4.280436 TCAGCCCTTTGAATCGACTTAA 57.720 40.909 0.00 0.00 0.00 1.85
776 782 3.973206 TCAGCCCTTTGAATCGACTTA 57.027 42.857 0.00 0.00 0.00 2.24
777 783 2.859165 TCAGCCCTTTGAATCGACTT 57.141 45.000 0.00 0.00 0.00 3.01
778 784 3.356529 AATCAGCCCTTTGAATCGACT 57.643 42.857 0.00 0.00 0.00 4.18
779 785 4.082787 TCAAAATCAGCCCTTTGAATCGAC 60.083 41.667 0.00 0.00 38.32 4.20
780 786 4.078537 TCAAAATCAGCCCTTTGAATCGA 58.921 39.130 0.00 0.00 38.32 3.59
781 787 4.082571 ACTCAAAATCAGCCCTTTGAATCG 60.083 41.667 0.00 0.00 40.16 3.34
782 788 5.166398 CACTCAAAATCAGCCCTTTGAATC 58.834 41.667 0.00 0.00 40.16 2.52
783 789 4.020839 CCACTCAAAATCAGCCCTTTGAAT 60.021 41.667 0.00 0.00 40.16 2.57
784 790 3.321682 CCACTCAAAATCAGCCCTTTGAA 59.678 43.478 0.00 0.00 40.16 2.69
785 791 2.892852 CCACTCAAAATCAGCCCTTTGA 59.107 45.455 0.00 0.00 38.81 2.69
786 792 2.629617 ACCACTCAAAATCAGCCCTTTG 59.370 45.455 0.00 0.00 34.49 2.77
787 793 2.962859 ACCACTCAAAATCAGCCCTTT 58.037 42.857 0.00 0.00 0.00 3.11
788 794 2.683211 ACCACTCAAAATCAGCCCTT 57.317 45.000 0.00 0.00 0.00 3.95
789 795 2.683211 AACCACTCAAAATCAGCCCT 57.317 45.000 0.00 0.00 0.00 5.19
790 796 2.627699 TGAAACCACTCAAAATCAGCCC 59.372 45.455 0.00 0.00 0.00 5.19
791 797 4.320608 TTGAAACCACTCAAAATCAGCC 57.679 40.909 0.00 0.00 32.39 4.85
792 798 5.984926 TGAATTGAAACCACTCAAAATCAGC 59.015 36.000 0.00 0.00 38.75 4.26
793 799 7.492020 TGTTGAATTGAAACCACTCAAAATCAG 59.508 33.333 0.00 0.00 38.75 2.90
794 800 7.326454 TGTTGAATTGAAACCACTCAAAATCA 58.674 30.769 0.00 0.00 38.75 2.57
795 801 7.769272 TGTTGAATTGAAACCACTCAAAATC 57.231 32.000 0.00 0.00 38.75 2.17
796 802 7.227116 CCATGTTGAATTGAAACCACTCAAAAT 59.773 33.333 0.00 0.00 38.75 1.82
797 803 6.538021 CCATGTTGAATTGAAACCACTCAAAA 59.462 34.615 0.00 0.00 38.75 2.44
798 804 6.047870 CCATGTTGAATTGAAACCACTCAAA 58.952 36.000 0.00 0.00 38.75 2.69
799 805 5.599732 CCATGTTGAATTGAAACCACTCAA 58.400 37.500 0.00 0.00 39.56 3.02
800 806 4.501229 GCCATGTTGAATTGAAACCACTCA 60.501 41.667 0.00 0.00 0.00 3.41
801 807 3.989817 GCCATGTTGAATTGAAACCACTC 59.010 43.478 0.00 0.00 0.00 3.51
802 808 3.387374 TGCCATGTTGAATTGAAACCACT 59.613 39.130 0.00 0.00 0.00 4.00
803 809 3.726607 TGCCATGTTGAATTGAAACCAC 58.273 40.909 0.00 0.00 0.00 4.16
804 810 3.640498 TCTGCCATGTTGAATTGAAACCA 59.360 39.130 0.00 0.00 0.00 3.67
805 811 4.255833 TCTGCCATGTTGAATTGAAACC 57.744 40.909 0.00 0.00 0.00 3.27
806 812 4.092383 GCATCTGCCATGTTGAATTGAAAC 59.908 41.667 0.00 0.00 34.31 2.78
807 813 4.247258 GCATCTGCCATGTTGAATTGAAA 58.753 39.130 0.00 0.00 34.31 2.69
808 814 3.673866 CGCATCTGCCATGTTGAATTGAA 60.674 43.478 0.00 0.00 37.91 2.69
809 815 2.159352 CGCATCTGCCATGTTGAATTGA 60.159 45.455 0.00 0.00 37.91 2.57
810 816 2.159352 TCGCATCTGCCATGTTGAATTG 60.159 45.455 0.00 0.00 37.91 2.32
811 817 2.093890 TCGCATCTGCCATGTTGAATT 58.906 42.857 0.00 0.00 37.91 2.17
812 818 1.753930 TCGCATCTGCCATGTTGAAT 58.246 45.000 0.00 0.00 37.91 2.57
813 819 1.753930 ATCGCATCTGCCATGTTGAA 58.246 45.000 0.00 0.00 37.91 2.69
814 820 1.753930 AATCGCATCTGCCATGTTGA 58.246 45.000 0.00 0.00 37.91 3.18
815 821 3.365832 GTTAATCGCATCTGCCATGTTG 58.634 45.455 0.00 0.00 37.91 3.33
816 822 2.032054 CGTTAATCGCATCTGCCATGTT 59.968 45.455 0.00 0.00 37.91 2.71
817 823 1.599071 CGTTAATCGCATCTGCCATGT 59.401 47.619 0.00 0.00 37.91 3.21
833 839 5.456548 TTACTCAAGATGTGTGTCCGTTA 57.543 39.130 0.00 0.00 35.59 3.18
841 847 3.838317 TGTAGCCCTTACTCAAGATGTGT 59.162 43.478 0.00 0.00 33.20 3.72
886 892 2.063015 CTGCTAACCCACCACACCCA 62.063 60.000 0.00 0.00 0.00 4.51
887 893 1.303317 CTGCTAACCCACCACACCC 60.303 63.158 0.00 0.00 0.00 4.61
890 896 0.250727 GAAGCTGCTAACCCACCACA 60.251 55.000 0.90 0.00 0.00 4.17
891 897 0.250727 TGAAGCTGCTAACCCACCAC 60.251 55.000 0.90 0.00 0.00 4.16
892 898 0.036732 CTGAAGCTGCTAACCCACCA 59.963 55.000 0.90 0.00 0.00 4.17
893 899 0.324943 TCTGAAGCTGCTAACCCACC 59.675 55.000 0.90 0.00 0.00 4.61
1045 1057 1.825090 TCACCAAGCTTCGCAATCAT 58.175 45.000 0.00 0.00 0.00 2.45
1367 1379 0.962855 GAGGCCTTGGAACTCCTTGC 60.963 60.000 6.77 0.00 36.82 4.01
1604 1880 1.149133 ACCAAGCCCTCCAAATCCCT 61.149 55.000 0.00 0.00 0.00 4.20
1798 2074 3.690475 TTGTCTGAGTGCACTGATCAT 57.310 42.857 27.27 0.00 0.00 2.45
1885 2180 6.985117 ACAGTCAATGCAAACAATACAAGAT 58.015 32.000 0.00 0.00 0.00 2.40
1894 2189 3.291584 TGGGTTACAGTCAATGCAAACA 58.708 40.909 0.00 0.00 32.36 2.83
1895 2190 4.022416 TCATGGGTTACAGTCAATGCAAAC 60.022 41.667 0.00 0.00 0.00 2.93
1896 2191 4.148079 TCATGGGTTACAGTCAATGCAAA 58.852 39.130 0.00 0.00 0.00 3.68
1899 2194 4.024893 CGTATCATGGGTTACAGTCAATGC 60.025 45.833 0.00 0.00 0.00 3.56
2005 2338 9.196552 GTTGCATTCTAGCTTTTCAAACTAATT 57.803 29.630 0.00 0.00 34.99 1.40
2624 2992 2.143122 TGTTTCGCTCACTAGCCAAAG 58.857 47.619 0.00 0.00 46.68 2.77
2887 3255 9.838339 ATAAAACTAAAGATTCATCATCGACCT 57.162 29.630 0.00 0.00 36.93 3.85
2913 3281 9.630098 GCATATCTTTCACAAGAGAATTCAAAA 57.370 29.630 8.44 0.00 42.53 2.44
2914 3282 7.964559 CGCATATCTTTCACAAGAGAATTCAAA 59.035 33.333 8.44 0.00 42.53 2.69
2915 3283 7.414429 CCGCATATCTTTCACAAGAGAATTCAA 60.414 37.037 8.44 0.00 42.53 2.69
2916 3284 6.037500 CCGCATATCTTTCACAAGAGAATTCA 59.962 38.462 8.44 0.00 42.53 2.57
2917 3285 6.425504 CCGCATATCTTTCACAAGAGAATTC 58.574 40.000 0.00 0.00 42.53 2.17
2918 3286 5.220931 GCCGCATATCTTTCACAAGAGAATT 60.221 40.000 0.00 0.00 42.53 2.17
2919 3287 4.274459 GCCGCATATCTTTCACAAGAGAAT 59.726 41.667 0.00 0.00 42.53 2.40
2920 3288 3.623060 GCCGCATATCTTTCACAAGAGAA 59.377 43.478 0.00 0.00 42.53 2.87
2921 3289 3.198068 GCCGCATATCTTTCACAAGAGA 58.802 45.455 0.00 0.00 42.53 3.10
2922 3290 2.938451 TGCCGCATATCTTTCACAAGAG 59.062 45.455 0.00 0.00 42.53 2.85
2923 3291 2.984562 TGCCGCATATCTTTCACAAGA 58.015 42.857 0.00 0.00 43.45 3.02
2924 3292 3.313249 TCATGCCGCATATCTTTCACAAG 59.687 43.478 5.31 0.00 0.00 3.16
2925 3293 3.277715 TCATGCCGCATATCTTTCACAA 58.722 40.909 5.31 0.00 0.00 3.33
2926 3294 2.916640 TCATGCCGCATATCTTTCACA 58.083 42.857 5.31 0.00 0.00 3.58
2927 3295 3.499537 TCATCATGCCGCATATCTTTCAC 59.500 43.478 5.31 0.00 0.00 3.18
2928 3296 3.499537 GTCATCATGCCGCATATCTTTCA 59.500 43.478 5.31 0.00 0.00 2.69
2929 3297 3.750130 AGTCATCATGCCGCATATCTTTC 59.250 43.478 5.31 0.00 0.00 2.62
2930 3298 3.748083 AGTCATCATGCCGCATATCTTT 58.252 40.909 5.31 0.00 0.00 2.52
2931 3299 3.413846 AGTCATCATGCCGCATATCTT 57.586 42.857 5.31 0.00 0.00 2.40
2932 3300 3.413846 AAGTCATCATGCCGCATATCT 57.586 42.857 5.31 0.00 0.00 1.98
2933 3301 4.214971 AGAAAAGTCATCATGCCGCATATC 59.785 41.667 5.31 0.00 0.00 1.63
2934 3302 4.139786 AGAAAAGTCATCATGCCGCATAT 58.860 39.130 5.31 0.00 0.00 1.78
2935 3303 3.544684 AGAAAAGTCATCATGCCGCATA 58.455 40.909 5.31 0.00 0.00 3.14
2936 3304 2.372264 AGAAAAGTCATCATGCCGCAT 58.628 42.857 0.00 0.00 0.00 4.73
2937 3305 1.825090 AGAAAAGTCATCATGCCGCA 58.175 45.000 0.00 0.00 0.00 5.69
2938 3306 2.289002 CCTAGAAAAGTCATCATGCCGC 59.711 50.000 0.00 0.00 0.00 6.53
2939 3307 3.797039 TCCTAGAAAAGTCATCATGCCG 58.203 45.455 0.00 0.00 0.00 5.69
2940 3308 6.071952 TGTTTTCCTAGAAAAGTCATCATGCC 60.072 38.462 2.85 0.00 0.00 4.40
2941 3309 6.913170 TGTTTTCCTAGAAAAGTCATCATGC 58.087 36.000 2.85 0.00 0.00 4.06
2942 3310 9.565213 GATTGTTTTCCTAGAAAAGTCATCATG 57.435 33.333 2.85 0.00 0.00 3.07
2943 3311 9.300681 TGATTGTTTTCCTAGAAAAGTCATCAT 57.699 29.630 2.85 0.00 0.00 2.45
2944 3312 8.690203 TGATTGTTTTCCTAGAAAAGTCATCA 57.310 30.769 2.85 8.03 0.00 3.07
2945 3313 9.565213 CATGATTGTTTTCCTAGAAAAGTCATC 57.435 33.333 15.29 11.71 0.00 2.92
2946 3314 8.526147 CCATGATTGTTTTCCTAGAAAAGTCAT 58.474 33.333 13.76 13.76 0.00 3.06
2947 3315 7.039784 CCCATGATTGTTTTCCTAGAAAAGTCA 60.040 37.037 2.85 8.26 0.00 3.41
2948 3316 7.315890 CCCATGATTGTTTTCCTAGAAAAGTC 58.684 38.462 2.85 3.69 0.00 3.01
2949 3317 6.211384 CCCCATGATTGTTTTCCTAGAAAAGT 59.789 38.462 2.85 0.00 0.00 2.66
2950 3318 6.211384 ACCCCATGATTGTTTTCCTAGAAAAG 59.789 38.462 2.85 0.00 0.00 2.27
2951 3319 6.081356 ACCCCATGATTGTTTTCCTAGAAAA 58.919 36.000 0.00 0.00 0.00 2.29
2952 3320 5.650283 ACCCCATGATTGTTTTCCTAGAAA 58.350 37.500 0.00 0.00 0.00 2.52
2953 3321 5.261216 GACCCCATGATTGTTTTCCTAGAA 58.739 41.667 0.00 0.00 0.00 2.10
2954 3322 4.325030 GGACCCCATGATTGTTTTCCTAGA 60.325 45.833 0.00 0.00 0.00 2.43
2955 3323 3.954258 GGACCCCATGATTGTTTTCCTAG 59.046 47.826 0.00 0.00 0.00 3.02
2956 3324 3.309556 GGGACCCCATGATTGTTTTCCTA 60.310 47.826 0.00 0.00 35.81 2.94
2957 3325 2.559705 GGGACCCCATGATTGTTTTCCT 60.560 50.000 0.00 0.00 35.81 3.36
2958 3326 1.831106 GGGACCCCATGATTGTTTTCC 59.169 52.381 0.00 0.00 35.81 3.13
2959 3327 2.534990 TGGGACCCCATGATTGTTTTC 58.465 47.619 8.45 0.00 41.89 2.29
2960 3328 2.711895 TGGGACCCCATGATTGTTTT 57.288 45.000 8.45 0.00 41.89 2.43
2971 3339 1.421480 GTAGGACTACATGGGACCCC 58.579 60.000 8.45 2.69 36.15 4.95
2972 3340 1.038280 CGTAGGACTACATGGGACCC 58.962 60.000 2.45 2.45 35.87 4.46
2973 3341 0.388294 GCGTAGGACTACATGGGACC 59.612 60.000 9.87 0.00 35.87 4.46
2974 3342 1.400737 AGCGTAGGACTACATGGGAC 58.599 55.000 9.87 0.00 35.87 4.46
2975 3343 1.754803 CAAGCGTAGGACTACATGGGA 59.245 52.381 9.87 0.00 35.87 4.37
2976 3344 1.806623 GCAAGCGTAGGACTACATGGG 60.807 57.143 9.87 0.00 35.87 4.00
2977 3345 1.137086 AGCAAGCGTAGGACTACATGG 59.863 52.381 9.87 0.00 35.87 3.66
2978 3346 2.586258 AGCAAGCGTAGGACTACATG 57.414 50.000 9.87 0.00 35.87 3.21
2979 3347 3.611766 AAAGCAAGCGTAGGACTACAT 57.388 42.857 9.87 0.00 35.87 2.29
2980 3348 3.256383 TGTAAAGCAAGCGTAGGACTACA 59.744 43.478 9.87 0.00 35.87 2.74
2981 3349 3.841643 TGTAAAGCAAGCGTAGGACTAC 58.158 45.455 0.00 0.00 0.00 2.73
2982 3350 3.508793 ACTGTAAAGCAAGCGTAGGACTA 59.491 43.478 0.00 0.00 0.00 2.59
2983 3351 2.299297 ACTGTAAAGCAAGCGTAGGACT 59.701 45.455 0.00 0.00 0.00 3.85
2984 3352 2.685100 ACTGTAAAGCAAGCGTAGGAC 58.315 47.619 0.00 0.00 0.00 3.85
2985 3353 3.064207 CAACTGTAAAGCAAGCGTAGGA 58.936 45.455 0.00 0.00 0.00 2.94
2986 3354 3.064207 TCAACTGTAAAGCAAGCGTAGG 58.936 45.455 0.00 0.00 0.00 3.18
2987 3355 3.987868 TCTCAACTGTAAAGCAAGCGTAG 59.012 43.478 0.00 0.00 0.00 3.51
2988 3356 3.985008 TCTCAACTGTAAAGCAAGCGTA 58.015 40.909 0.00 0.00 0.00 4.42
2989 3357 2.833794 TCTCAACTGTAAAGCAAGCGT 58.166 42.857 0.00 0.00 0.00 5.07
2990 3358 3.878086 TTCTCAACTGTAAAGCAAGCG 57.122 42.857 0.00 0.00 0.00 4.68
2991 3359 4.398247 CGATTCTCAACTGTAAAGCAAGC 58.602 43.478 0.00 0.00 0.00 4.01
2992 3360 4.142816 CCCGATTCTCAACTGTAAAGCAAG 60.143 45.833 0.00 0.00 0.00 4.01
2993 3361 3.751175 CCCGATTCTCAACTGTAAAGCAA 59.249 43.478 0.00 0.00 0.00 3.91
2994 3362 3.244422 ACCCGATTCTCAACTGTAAAGCA 60.244 43.478 0.00 0.00 0.00 3.91
2995 3363 3.125316 CACCCGATTCTCAACTGTAAAGC 59.875 47.826 0.00 0.00 0.00 3.51
2996 3364 4.152402 CACACCCGATTCTCAACTGTAAAG 59.848 45.833 0.00 0.00 0.00 1.85
2997 3365 4.062293 CACACCCGATTCTCAACTGTAAA 58.938 43.478 0.00 0.00 0.00 2.01
2998 3366 3.659786 CACACCCGATTCTCAACTGTAA 58.340 45.455 0.00 0.00 0.00 2.41
2999 3367 2.611971 GCACACCCGATTCTCAACTGTA 60.612 50.000 0.00 0.00 0.00 2.74
3000 3368 1.878102 GCACACCCGATTCTCAACTGT 60.878 52.381 0.00 0.00 0.00 3.55
3001 3369 0.798776 GCACACCCGATTCTCAACTG 59.201 55.000 0.00 0.00 0.00 3.16
3002 3370 0.396435 TGCACACCCGATTCTCAACT 59.604 50.000 0.00 0.00 0.00 3.16
3003 3371 0.517316 GTGCACACCCGATTCTCAAC 59.483 55.000 13.17 0.00 0.00 3.18
3004 3372 0.107643 TGTGCACACCCGATTCTCAA 59.892 50.000 17.42 0.00 0.00 3.02
3005 3373 0.602638 GTGTGCACACCCGATTCTCA 60.603 55.000 34.94 0.00 40.85 3.27
3006 3374 0.602638 TGTGTGCACACCCGATTCTC 60.603 55.000 39.34 17.76 45.88 2.87
3007 3375 0.603707 CTGTGTGCACACCCGATTCT 60.604 55.000 39.34 0.00 45.88 2.40
3008 3376 0.884704 ACTGTGTGCACACCCGATTC 60.885 55.000 39.34 19.15 45.88 2.52
3009 3377 0.884704 GACTGTGTGCACACCCGATT 60.885 55.000 39.34 22.48 45.88 3.34
3010 3378 1.301716 GACTGTGTGCACACCCGAT 60.302 57.895 39.34 25.03 45.88 4.18
3011 3379 2.038814 ATGACTGTGTGCACACCCGA 62.039 55.000 39.34 24.34 45.88 5.14
3012 3380 1.568612 GATGACTGTGTGCACACCCG 61.569 60.000 39.34 31.99 45.88 5.28
3013 3381 0.534877 TGATGACTGTGTGCACACCC 60.535 55.000 39.34 29.03 45.88 4.61
3014 3382 0.870393 CTGATGACTGTGTGCACACC 59.130 55.000 39.34 27.21 45.88 4.16
3015 3383 1.528586 GACTGATGACTGTGTGCACAC 59.471 52.381 37.28 37.28 46.59 3.82
3016 3384 1.138661 TGACTGATGACTGTGTGCACA 59.861 47.619 17.42 17.42 39.32 4.57
3017 3385 1.869774 TGACTGATGACTGTGTGCAC 58.130 50.000 10.75 10.75 0.00 4.57
3018 3386 2.301009 AGATGACTGATGACTGTGTGCA 59.699 45.455 0.00 0.00 0.00 4.57
3019 3387 2.928757 GAGATGACTGATGACTGTGTGC 59.071 50.000 0.00 0.00 0.00 4.57
3020 3388 3.056322 TGGAGATGACTGATGACTGTGTG 60.056 47.826 0.00 0.00 0.00 3.82
3021 3389 3.168292 TGGAGATGACTGATGACTGTGT 58.832 45.455 0.00 0.00 0.00 3.72
3022 3390 3.446516 TCTGGAGATGACTGATGACTGTG 59.553 47.826 0.00 0.00 0.00 3.66
3023 3391 3.706183 TCTGGAGATGACTGATGACTGT 58.294 45.455 0.00 0.00 0.00 3.55
3024 3392 4.341520 TGATCTGGAGATGACTGATGACTG 59.658 45.833 0.00 0.00 34.37 3.51
3025 3393 4.544683 TGATCTGGAGATGACTGATGACT 58.455 43.478 0.00 0.00 34.37 3.41
3026 3394 4.583907 TCTGATCTGGAGATGACTGATGAC 59.416 45.833 0.00 0.00 34.37 3.06
3027 3395 4.801164 TCTGATCTGGAGATGACTGATGA 58.199 43.478 0.00 0.00 34.37 2.92
3028 3396 5.336929 GGATCTGATCTGGAGATGACTGATG 60.337 48.000 16.61 0.00 34.37 3.07
3029 3397 4.773674 GGATCTGATCTGGAGATGACTGAT 59.226 45.833 16.61 0.00 34.37 2.90
3030 3398 4.151121 GGATCTGATCTGGAGATGACTGA 58.849 47.826 16.61 0.00 34.37 3.41
3031 3399 3.057386 CGGATCTGATCTGGAGATGACTG 60.057 52.174 17.04 0.00 34.37 3.51
3032 3400 3.156293 CGGATCTGATCTGGAGATGACT 58.844 50.000 17.04 0.00 34.37 3.41
3033 3401 3.574284 CGGATCTGATCTGGAGATGAC 57.426 52.381 17.04 0.00 34.37 3.06
3041 3409 0.033228 GGTGCTCCGGATCTGATCTG 59.967 60.000 17.73 17.73 35.39 2.90
3042 3410 2.435418 GGTGCTCCGGATCTGATCT 58.565 57.895 16.61 0.00 0.00 2.75
3053 3421 3.384014 CTCTCGTCGTCGGTGCTCC 62.384 68.421 1.55 0.00 37.69 4.70
3054 3422 2.098680 CTCTCGTCGTCGGTGCTC 59.901 66.667 1.55 0.00 37.69 4.26
3055 3423 2.358369 TCTCTCGTCGTCGGTGCT 60.358 61.111 1.55 0.00 37.69 4.40
3056 3424 2.202324 GTCTCTCGTCGTCGGTGC 60.202 66.667 1.55 0.00 37.69 5.01
3057 3425 2.096030 CGTCTCTCGTCGTCGGTG 59.904 66.667 1.55 0.00 37.69 4.94
3058 3426 2.048784 TCGTCTCTCGTCGTCGGT 60.049 61.111 1.55 0.00 40.80 4.69
3059 3427 2.696238 CTCGTCTCTCGTCGTCGG 59.304 66.667 1.55 0.00 40.80 4.79
3060 3428 2.696238 CCTCGTCTCTCGTCGTCG 59.304 66.667 0.00 0.00 40.80 5.12
3061 3429 2.462782 CCCCTCGTCTCTCGTCGTC 61.463 68.421 0.00 0.00 40.80 4.20
3062 3430 2.436292 CCCCTCGTCTCTCGTCGT 60.436 66.667 0.00 0.00 40.80 4.34
3063 3431 1.303799 TTTCCCCTCGTCTCTCGTCG 61.304 60.000 0.00 0.00 40.80 5.12
3064 3432 0.452585 CTTTCCCCTCGTCTCTCGTC 59.547 60.000 0.00 0.00 40.80 4.20
3065 3433 0.966370 CCTTTCCCCTCGTCTCTCGT 60.966 60.000 0.00 0.00 40.80 4.18
3066 3434 1.810532 CCTTTCCCCTCGTCTCTCG 59.189 63.158 0.00 0.00 41.41 4.04
3067 3435 1.258445 TGCCTTTCCCCTCGTCTCTC 61.258 60.000 0.00 0.00 0.00 3.20
3068 3436 0.836400 TTGCCTTTCCCCTCGTCTCT 60.836 55.000 0.00 0.00 0.00 3.10
3069 3437 0.253327 ATTGCCTTTCCCCTCGTCTC 59.747 55.000 0.00 0.00 0.00 3.36
3070 3438 0.253327 GATTGCCTTTCCCCTCGTCT 59.747 55.000 0.00 0.00 0.00 4.18
3071 3439 0.035439 TGATTGCCTTTCCCCTCGTC 60.035 55.000 0.00 0.00 0.00 4.20
3072 3440 0.404040 TTGATTGCCTTTCCCCTCGT 59.596 50.000 0.00 0.00 0.00 4.18
3073 3441 1.678101 GATTGATTGCCTTTCCCCTCG 59.322 52.381 0.00 0.00 0.00 4.63
3074 3442 2.034878 GGATTGATTGCCTTTCCCCTC 58.965 52.381 0.00 0.00 0.00 4.30
3075 3443 1.343377 GGGATTGATTGCCTTTCCCCT 60.343 52.381 0.00 0.00 40.20 4.79
3076 3444 1.123077 GGGATTGATTGCCTTTCCCC 58.877 55.000 0.00 0.00 40.20 4.81
3077 3445 1.123077 GGGGATTGATTGCCTTTCCC 58.877 55.000 0.00 0.00 44.49 3.97
3078 3446 1.123077 GGGGGATTGATTGCCTTTCC 58.877 55.000 0.00 0.00 35.78 3.13
3079 3447 1.482182 GTGGGGGATTGATTGCCTTTC 59.518 52.381 0.00 0.00 35.78 2.62
3080 3448 1.203288 TGTGGGGGATTGATTGCCTTT 60.203 47.619 0.00 0.00 35.78 3.11
3081 3449 0.413037 TGTGGGGGATTGATTGCCTT 59.587 50.000 0.00 0.00 35.78 4.35
3082 3450 0.638292 ATGTGGGGGATTGATTGCCT 59.362 50.000 0.00 0.00 35.78 4.75
3083 3451 1.043022 GATGTGGGGGATTGATTGCC 58.957 55.000 0.00 0.00 34.39 4.52
3084 3452 1.684983 CTGATGTGGGGGATTGATTGC 59.315 52.381 0.00 0.00 0.00 3.56
3085 3453 3.301794 TCTGATGTGGGGGATTGATTG 57.698 47.619 0.00 0.00 0.00 2.67
3086 3454 3.725797 AGATCTGATGTGGGGGATTGATT 59.274 43.478 0.00 0.00 0.00 2.57
3087 3455 3.333893 AGATCTGATGTGGGGGATTGAT 58.666 45.455 0.00 0.00 0.00 2.57
3088 3456 2.780414 AGATCTGATGTGGGGGATTGA 58.220 47.619 0.00 0.00 0.00 2.57
3089 3457 3.906218 TCTAGATCTGATGTGGGGGATTG 59.094 47.826 5.18 0.00 0.00 2.67
3090 3458 4.166539 CTCTAGATCTGATGTGGGGGATT 58.833 47.826 5.18 0.00 0.00 3.01
3091 3459 3.788933 CTCTAGATCTGATGTGGGGGAT 58.211 50.000 5.18 0.00 0.00 3.85
3092 3460 2.757950 GCTCTAGATCTGATGTGGGGGA 60.758 54.545 5.18 0.00 0.00 4.81
3093 3461 1.622811 GCTCTAGATCTGATGTGGGGG 59.377 57.143 5.18 0.00 0.00 5.40
3094 3462 2.299582 CAGCTCTAGATCTGATGTGGGG 59.700 54.545 16.97 0.00 32.26 4.96
3095 3463 2.288948 GCAGCTCTAGATCTGATGTGGG 60.289 54.545 24.35 0.00 32.26 4.61
3096 3464 2.607526 CGCAGCTCTAGATCTGATGTGG 60.608 54.545 24.35 6.30 32.26 4.17
3097 3465 2.663808 CGCAGCTCTAGATCTGATGTG 58.336 52.381 24.35 10.69 32.26 3.21
3117 3485 4.828925 GAGGAGCTCAGGGCACGC 62.829 72.222 17.19 0.00 44.79 5.34
3118 3486 4.504916 CGAGGAGCTCAGGGCACG 62.505 72.222 17.19 4.61 44.79 5.34
3119 3487 4.828925 GCGAGGAGCTCAGGGCAC 62.829 72.222 17.19 0.00 44.79 5.01
3143 3511 0.318445 GATATTCGACCCGACCACCG 60.318 60.000 0.00 0.00 34.89 4.94
3144 3512 0.033090 GGATATTCGACCCGACCACC 59.967 60.000 0.00 0.00 34.89 4.61
3145 3513 0.033090 GGGATATTCGACCCGACCAC 59.967 60.000 0.00 0.00 34.89 4.16
3146 3514 2.433217 GGGATATTCGACCCGACCA 58.567 57.895 0.00 0.00 34.89 4.02
3156 3524 4.894784 TGTAGCCGAATGAAGGGATATTC 58.105 43.478 0.00 0.00 0.00 1.75
3157 3525 4.804261 GCTGTAGCCGAATGAAGGGATATT 60.804 45.833 0.00 0.00 34.31 1.28
3158 3526 3.307059 GCTGTAGCCGAATGAAGGGATAT 60.307 47.826 0.00 0.00 34.31 1.63
3159 3527 2.037251 GCTGTAGCCGAATGAAGGGATA 59.963 50.000 0.00 0.00 34.31 2.59
3160 3528 1.202698 GCTGTAGCCGAATGAAGGGAT 60.203 52.381 0.00 0.00 34.31 3.85
3161 3529 0.178068 GCTGTAGCCGAATGAAGGGA 59.822 55.000 0.00 0.00 34.31 4.20
3162 3530 0.179000 AGCTGTAGCCGAATGAAGGG 59.821 55.000 0.00 0.00 43.38 3.95
3163 3531 1.576356 GAGCTGTAGCCGAATGAAGG 58.424 55.000 0.00 0.00 43.38 3.46
3164 3532 1.576356 GGAGCTGTAGCCGAATGAAG 58.424 55.000 0.00 0.00 43.38 3.02
3165 3533 0.178068 GGGAGCTGTAGCCGAATGAA 59.822 55.000 0.00 0.00 43.38 2.57
3166 3534 0.975556 TGGGAGCTGTAGCCGAATGA 60.976 55.000 0.00 0.00 43.38 2.57
3167 3535 0.811616 GTGGGAGCTGTAGCCGAATG 60.812 60.000 0.00 0.00 43.38 2.67
3168 3536 1.522569 GTGGGAGCTGTAGCCGAAT 59.477 57.895 0.00 0.00 43.38 3.34
3169 3537 2.978824 GTGGGAGCTGTAGCCGAA 59.021 61.111 0.00 0.00 43.38 4.30
3170 3538 3.449227 CGTGGGAGCTGTAGCCGA 61.449 66.667 0.00 0.00 43.38 5.54
3171 3539 3.417275 CTCGTGGGAGCTGTAGCCG 62.417 68.421 0.00 0.00 43.38 5.52
3172 3540 2.496817 CTCGTGGGAGCTGTAGCC 59.503 66.667 0.00 0.00 43.38 3.93
3218 3586 3.057547 CTGGTGGAGCTCGTCGGAG 62.058 68.421 7.83 0.00 43.46 4.63
3219 3587 3.062466 CTGGTGGAGCTCGTCGGA 61.062 66.667 7.83 0.00 0.00 4.55
3220 3588 4.803426 GCTGGTGGAGCTCGTCGG 62.803 72.222 7.83 5.89 45.21 4.79
3222 3590 3.691744 CTCGCTGGTGGAGCTCGTC 62.692 68.421 7.83 2.85 46.64 4.20
3223 3591 3.753434 CTCGCTGGTGGAGCTCGT 61.753 66.667 7.83 0.00 46.64 4.18
3242 3610 3.682292 ATCCTCTTTCACCGCCGCC 62.682 63.158 0.00 0.00 0.00 6.13
3243 3611 1.305930 AAATCCTCTTTCACCGCCGC 61.306 55.000 0.00 0.00 0.00 6.53
3244 3612 0.447801 CAAATCCTCTTTCACCGCCG 59.552 55.000 0.00 0.00 0.00 6.46
3245 3613 0.171231 GCAAATCCTCTTTCACCGCC 59.829 55.000 0.00 0.00 0.00 6.13
3246 3614 0.881118 TGCAAATCCTCTTTCACCGC 59.119 50.000 0.00 0.00 0.00 5.68
3247 3615 2.749076 TGATGCAAATCCTCTTTCACCG 59.251 45.455 0.00 0.00 0.00 4.94
3248 3616 4.012374 TCTGATGCAAATCCTCTTTCACC 58.988 43.478 0.00 0.00 0.00 4.02
3249 3617 4.699257 ACTCTGATGCAAATCCTCTTTCAC 59.301 41.667 0.00 0.00 0.00 3.18
3250 3618 4.914983 ACTCTGATGCAAATCCTCTTTCA 58.085 39.130 0.00 0.00 0.00 2.69
3251 3619 6.204495 GGATACTCTGATGCAAATCCTCTTTC 59.796 42.308 0.00 0.00 32.00 2.62
3252 3620 6.060788 GGATACTCTGATGCAAATCCTCTTT 58.939 40.000 0.00 0.00 32.00 2.52
3253 3621 5.619220 GGATACTCTGATGCAAATCCTCTT 58.381 41.667 0.00 0.00 32.00 2.85
3254 3622 4.262377 CGGATACTCTGATGCAAATCCTCT 60.262 45.833 0.00 0.00 32.44 3.69
3255 3623 3.993081 CGGATACTCTGATGCAAATCCTC 59.007 47.826 0.00 0.00 32.44 3.71
3256 3624 3.643320 TCGGATACTCTGATGCAAATCCT 59.357 43.478 0.00 0.00 32.44 3.24
3257 3625 3.743396 GTCGGATACTCTGATGCAAATCC 59.257 47.826 0.00 0.00 33.80 3.01
3258 3626 4.371786 TGTCGGATACTCTGATGCAAATC 58.628 43.478 0.00 0.00 33.80 2.17
3259 3627 4.141846 ACTGTCGGATACTCTGATGCAAAT 60.142 41.667 0.00 0.00 33.80 2.32
3260 3628 3.195610 ACTGTCGGATACTCTGATGCAAA 59.804 43.478 0.00 0.00 33.80 3.68
3261 3629 2.760650 ACTGTCGGATACTCTGATGCAA 59.239 45.455 0.00 0.00 33.80 4.08
3262 3630 2.379005 ACTGTCGGATACTCTGATGCA 58.621 47.619 0.00 0.00 33.80 3.96
3263 3631 3.119291 CAACTGTCGGATACTCTGATGC 58.881 50.000 0.00 0.00 33.80 3.91
3264 3632 3.491619 CCCAACTGTCGGATACTCTGATG 60.492 52.174 0.00 0.00 33.80 3.07
3265 3633 2.695666 CCCAACTGTCGGATACTCTGAT 59.304 50.000 0.00 0.00 33.80 2.90
3266 3634 2.100197 CCCAACTGTCGGATACTCTGA 58.900 52.381 0.00 0.00 0.00 3.27
3267 3635 2.100197 TCCCAACTGTCGGATACTCTG 58.900 52.381 0.00 0.00 0.00 3.35
3268 3636 2.526888 TCCCAACTGTCGGATACTCT 57.473 50.000 0.00 0.00 0.00 3.24
3269 3637 2.036089 GGATCCCAACTGTCGGATACTC 59.964 54.545 0.00 1.44 39.04 2.59
3270 3638 2.040178 GGATCCCAACTGTCGGATACT 58.960 52.381 0.00 0.00 39.04 2.12
3271 3639 1.269621 CGGATCCCAACTGTCGGATAC 60.270 57.143 6.06 8.61 39.04 2.24
3272 3640 1.037493 CGGATCCCAACTGTCGGATA 58.963 55.000 6.06 0.00 39.04 2.59
3273 3641 0.686441 TCGGATCCCAACTGTCGGAT 60.686 55.000 6.06 8.64 41.72 4.18
3274 3642 0.686441 ATCGGATCCCAACTGTCGGA 60.686 55.000 6.06 0.00 0.00 4.55
3275 3643 0.178068 AATCGGATCCCAACTGTCGG 59.822 55.000 6.06 0.00 0.00 4.79
3276 3644 1.290203 CAATCGGATCCCAACTGTCG 58.710 55.000 6.06 0.00 0.00 4.35
3277 3645 1.065418 ACCAATCGGATCCCAACTGTC 60.065 52.381 6.06 0.00 35.59 3.51
3278 3646 0.991920 ACCAATCGGATCCCAACTGT 59.008 50.000 6.06 0.00 35.59 3.55
3279 3647 2.128771 AACCAATCGGATCCCAACTG 57.871 50.000 6.06 0.00 35.59 3.16
3280 3648 2.825532 CAAAACCAATCGGATCCCAACT 59.174 45.455 6.06 0.00 35.59 3.16
3281 3649 2.094234 CCAAAACCAATCGGATCCCAAC 60.094 50.000 6.06 0.00 35.59 3.77
3282 3650 2.175202 CCAAAACCAATCGGATCCCAA 58.825 47.619 6.06 0.00 35.59 4.12
3283 3651 1.846007 CCAAAACCAATCGGATCCCA 58.154 50.000 6.06 0.00 35.59 4.37
3284 3652 0.459899 GCCAAAACCAATCGGATCCC 59.540 55.000 6.06 0.00 35.59 3.85
3285 3653 1.474330 AGCCAAAACCAATCGGATCC 58.526 50.000 0.00 0.00 35.59 3.36
3286 3654 3.279434 ACTAGCCAAAACCAATCGGATC 58.721 45.455 0.00 0.00 35.59 3.36
3287 3655 3.279434 GACTAGCCAAAACCAATCGGAT 58.721 45.455 0.00 0.00 35.59 4.18
3288 3656 2.706890 GACTAGCCAAAACCAATCGGA 58.293 47.619 0.00 0.00 35.59 4.55
3289 3657 1.396996 CGACTAGCCAAAACCAATCGG 59.603 52.381 0.00 0.00 38.77 4.18
3290 3658 1.202031 GCGACTAGCCAAAACCAATCG 60.202 52.381 0.00 0.00 40.81 3.34
3291 3659 2.544480 GCGACTAGCCAAAACCAATC 57.456 50.000 0.00 0.00 40.81 2.67
3302 3670 1.140407 AATCGACGCAAGCGACTAGC 61.140 55.000 22.30 4.04 45.45 3.42
3303 3671 0.840729 GAATCGACGCAAGCGACTAG 59.159 55.000 22.30 8.87 45.45 2.57
3304 3672 0.169451 TGAATCGACGCAAGCGACTA 59.831 50.000 22.30 7.56 45.45 2.59
3305 3673 0.458543 ATGAATCGACGCAAGCGACT 60.459 50.000 22.30 0.00 45.45 4.18
3306 3674 0.314578 CATGAATCGACGCAAGCGAC 60.315 55.000 22.30 14.20 45.45 5.19
3307 3675 1.420641 CCATGAATCGACGCAAGCGA 61.421 55.000 22.30 0.00 46.33 4.93
3308 3676 1.011904 CCATGAATCGACGCAAGCG 60.012 57.895 13.50 13.50 46.03 4.68
3309 3677 0.447801 AACCATGAATCGACGCAAGC 59.552 50.000 0.00 0.00 45.62 4.01
3311 3679 1.731709 CTGAACCATGAATCGACGCAA 59.268 47.619 0.00 0.00 0.00 4.85
3312 3680 1.358877 CTGAACCATGAATCGACGCA 58.641 50.000 0.00 0.00 0.00 5.24
3313 3681 0.652592 CCTGAACCATGAATCGACGC 59.347 55.000 0.00 0.00 0.00 5.19
3314 3682 2.010145 ACCTGAACCATGAATCGACG 57.990 50.000 0.00 0.00 0.00 5.12
3315 3683 2.348666 CGAACCTGAACCATGAATCGAC 59.651 50.000 0.00 0.00 0.00 4.20
3316 3684 2.232696 TCGAACCTGAACCATGAATCGA 59.767 45.455 0.00 0.00 35.92 3.59
3317 3685 2.616960 TCGAACCTGAACCATGAATCG 58.383 47.619 0.00 0.00 0.00 3.34
3318 3686 4.035675 GGAATCGAACCTGAACCATGAATC 59.964 45.833 0.00 0.00 0.00 2.52
3319 3687 3.947834 GGAATCGAACCTGAACCATGAAT 59.052 43.478 0.00 0.00 0.00 2.57
3320 3688 3.244735 TGGAATCGAACCTGAACCATGAA 60.245 43.478 12.11 0.00 0.00 2.57
3321 3689 2.304470 TGGAATCGAACCTGAACCATGA 59.696 45.455 12.11 0.00 0.00 3.07
3322 3690 2.420022 GTGGAATCGAACCTGAACCATG 59.580 50.000 12.11 0.00 33.38 3.66
3323 3691 2.305927 AGTGGAATCGAACCTGAACCAT 59.694 45.455 12.11 0.00 33.38 3.55
3324 3692 1.697432 AGTGGAATCGAACCTGAACCA 59.303 47.619 12.11 0.00 0.00 3.67
3325 3693 2.474410 AGTGGAATCGAACCTGAACC 57.526 50.000 12.11 0.00 0.00 3.62
3326 3694 2.742589 GGAAGTGGAATCGAACCTGAAC 59.257 50.000 12.11 4.00 0.00 3.18
3327 3695 2.637872 AGGAAGTGGAATCGAACCTGAA 59.362 45.455 12.11 0.00 0.00 3.02
3328 3696 2.257207 AGGAAGTGGAATCGAACCTGA 58.743 47.619 12.11 0.00 0.00 3.86
3329 3697 2.770164 AGGAAGTGGAATCGAACCTG 57.230 50.000 12.11 0.00 0.00 4.00
3330 3698 3.790089 AAAGGAAGTGGAATCGAACCT 57.210 42.857 12.11 0.00 0.00 3.50
3331 3699 4.519350 AGAAAAAGGAAGTGGAATCGAACC 59.481 41.667 5.25 5.25 0.00 3.62
3332 3700 5.690997 AGAAAAAGGAAGTGGAATCGAAC 57.309 39.130 0.00 0.00 0.00 3.95
3333 3701 6.709018 AAAGAAAAAGGAAGTGGAATCGAA 57.291 33.333 0.00 0.00 0.00 3.71
3334 3702 6.709018 AAAAGAAAAAGGAAGTGGAATCGA 57.291 33.333 0.00 0.00 0.00 3.59
3335 3703 6.978080 TGAAAAAGAAAAAGGAAGTGGAATCG 59.022 34.615 0.00 0.00 0.00 3.34
3336 3704 8.716646 TTGAAAAAGAAAAAGGAAGTGGAATC 57.283 30.769 0.00 0.00 0.00 2.52
3337 3705 7.280876 GCTTGAAAAAGAAAAAGGAAGTGGAAT 59.719 33.333 0.00 0.00 0.00 3.01
3338 3706 6.593770 GCTTGAAAAAGAAAAAGGAAGTGGAA 59.406 34.615 0.00 0.00 0.00 3.53
3339 3707 6.106003 GCTTGAAAAAGAAAAAGGAAGTGGA 58.894 36.000 0.00 0.00 0.00 4.02
3340 3708 5.874261 TGCTTGAAAAAGAAAAAGGAAGTGG 59.126 36.000 0.00 0.00 0.00 4.00
3341 3709 6.591448 AGTGCTTGAAAAAGAAAAAGGAAGTG 59.409 34.615 0.00 0.00 0.00 3.16
3342 3710 6.591448 CAGTGCTTGAAAAAGAAAAAGGAAGT 59.409 34.615 0.00 0.00 0.00 3.01
3343 3711 6.456047 GCAGTGCTTGAAAAAGAAAAAGGAAG 60.456 38.462 8.18 0.00 0.00 3.46
3344 3712 5.351189 GCAGTGCTTGAAAAAGAAAAAGGAA 59.649 36.000 8.18 0.00 0.00 3.36
3345 3713 4.869861 GCAGTGCTTGAAAAAGAAAAAGGA 59.130 37.500 8.18 0.00 0.00 3.36
3346 3714 4.872124 AGCAGTGCTTGAAAAAGAAAAAGG 59.128 37.500 13.14 0.00 33.89 3.11
3361 3729 2.918712 ACAGTCTAACAAGCAGTGCT 57.081 45.000 13.14 13.14 42.56 4.40
3362 3730 9.862371 ATATATATACAGTCTAACAAGCAGTGC 57.138 33.333 7.13 7.13 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.