Multiple sequence alignment - TraesCS3B01G032100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G032100 chr3B 100.000 3555 0 0 1 3555 14546111 14549665 0.000000e+00 6565.0
1 TraesCS3B01G032100 chr3B 87.362 1630 155 31 945 2555 26757717 26759314 0.000000e+00 1821.0
2 TraesCS3B01G032100 chr3B 86.622 1338 133 28 1230 2555 26812017 26813320 0.000000e+00 1437.0
3 TraesCS3B01G032100 chr3B 91.527 956 40 16 2577 3530 14964595 14965511 0.000000e+00 1279.0
4 TraesCS3B01G032100 chr3B 86.038 1146 115 24 1446 2576 26747629 26746514 0.000000e+00 1188.0
5 TraesCS3B01G032100 chr3B 93.544 790 46 5 1790 2576 14963763 14964550 0.000000e+00 1171.0
6 TraesCS3B01G032100 chr3B 90.734 831 35 17 2733 3553 14414561 14413763 0.000000e+00 1070.0
7 TraesCS3B01G032100 chr3B 86.781 991 94 21 1599 2576 14416052 14415086 0.000000e+00 1070.0
8 TraesCS3B01G032100 chr3B 95.674 601 22 3 2577 3174 26746469 26745870 0.000000e+00 963.0
9 TraesCS3B01G032100 chr3B 86.147 859 102 12 1718 2571 14470977 14470131 0.000000e+00 911.0
10 TraesCS3B01G032100 chr3B 90.432 533 22 12 372 876 26757187 26757718 0.000000e+00 675.0
11 TraesCS3B01G032100 chr3B 96.113 283 10 1 3273 3555 26851816 26852097 8.990000e-126 460.0
12 TraesCS3B01G032100 chr3B 89.318 337 29 7 1428 1762 14963438 14963769 1.970000e-112 416.0
13 TraesCS3B01G032100 chr3B 95.276 254 10 2 3005 3258 26836360 26836611 5.530000e-108 401.0
14 TraesCS3B01G032100 chr3B 88.015 267 25 5 2735 2996 14415039 14414775 3.450000e-80 309.0
15 TraesCS3B01G032100 chr3B 82.289 367 41 8 945 1296 14475335 14474978 2.680000e-76 296.0
16 TraesCS3B01G032100 chr3B 81.421 366 50 10 1216 1574 26747990 26747636 2.090000e-72 283.0
17 TraesCS3B01G032100 chr3B 85.338 266 32 5 2731 2992 14470084 14469822 5.850000e-68 268.0
18 TraesCS3B01G032100 chr3B 85.475 179 20 5 986 1164 26748251 26748079 7.840000e-42 182.0
19 TraesCS3B01G032100 chr3B 76.731 361 59 15 438 785 14475757 14475409 1.010000e-40 178.0
20 TraesCS3B01G032100 chr3B 91.453 117 10 0 3006 3122 14469704 14469588 1.020000e-35 161.0
21 TraesCS3B01G032100 chr3D 90.975 1651 107 21 945 2576 10410933 10409306 0.000000e+00 2185.0
22 TraesCS3B01G032100 chr3D 90.772 1658 102 25 945 2576 10530880 10532512 0.000000e+00 2167.0
23 TraesCS3B01G032100 chr3D 86.333 1178 120 27 1417 2576 10460248 10461402 0.000000e+00 1245.0
24 TraesCS3B01G032100 chr3D 91.402 756 38 11 2729 3476 10409263 10408527 0.000000e+00 1011.0
25 TraesCS3B01G032100 chr3D 96.179 602 19 2 2955 3555 10533125 10533723 0.000000e+00 981.0
26 TraesCS3B01G032100 chr3D 96.907 388 11 1 2577 2963 10532557 10532944 0.000000e+00 649.0
27 TraesCS3B01G032100 chr3D 91.489 470 33 6 3089 3555 10461840 10462305 1.080000e-179 640.0
28 TraesCS3B01G032100 chr3D 89.800 451 33 8 426 876 10411369 10410932 1.850000e-157 566.0
29 TraesCS3B01G032100 chr3D 91.084 415 29 3 462 876 10530475 10530881 4.010000e-154 555.0
30 TraesCS3B01G032100 chr3D 90.289 381 19 8 2732 3097 10461442 10461819 1.920000e-132 483.0
31 TraesCS3B01G032100 chr3A 90.196 1632 122 23 967 2576 16622204 16620589 0.000000e+00 2093.0
32 TraesCS3B01G032100 chr3A 95.233 986 39 5 2577 3555 16620544 16619560 0.000000e+00 1554.0
33 TraesCS3B01G032100 chr3A 97.844 371 8 0 1 371 645633292 645633662 2.990000e-180 641.0
34 TraesCS3B01G032100 chr3A 97.838 370 8 0 1 370 386433671 386434040 1.080000e-179 640.0
35 TraesCS3B01G032100 chr3A 97.312 372 10 0 1 372 476148754 476148383 1.800000e-177 632.0
36 TraesCS3B01G032100 chr3A 87.500 512 36 13 372 863 16622704 16622201 1.850000e-157 566.0
37 TraesCS3B01G032100 chr3A 84.270 445 53 10 2733 3161 16663821 16664264 5.490000e-113 418.0
38 TraesCS3B01G032100 chr3A 90.964 166 13 2 2577 2741 356085363 356085199 4.620000e-54 222.0
39 TraesCS3B01G032100 chr3A 80.392 153 14 7 1165 1308 16662520 16662665 6.280000e-18 102.0
40 TraesCS3B01G032100 chr1B 98.113 371 7 0 1 371 558927084 558927454 0.000000e+00 647.0
41 TraesCS3B01G032100 chr4B 98.103 369 7 0 1 369 115386920 115387288 0.000000e+00 643.0
42 TraesCS3B01G032100 chr7B 97.844 371 8 0 1 371 726306184 726305814 2.990000e-180 641.0
43 TraesCS3B01G032100 chr7B 91.463 164 9 5 2577 2737 490208147 490207986 1.660000e-53 220.0
44 TraesCS3B01G032100 chr7B 88.095 84 7 3 875 955 741810995 741810912 2.920000e-16 97.1
45 TraesCS3B01G032100 chr7B 88.095 84 7 3 875 955 741843321 741843238 2.920000e-16 97.1
46 TraesCS3B01G032100 chr2A 97.832 369 8 0 1 369 120677497 120677865 3.870000e-179 638.0
47 TraesCS3B01G032100 chr2A 97.312 372 10 0 1 372 746768128 746768499 1.800000e-177 632.0
48 TraesCS3B01G032100 chrUn 97.568 370 9 0 1 370 306831285 306830916 5.010000e-178 634.0
49 TraesCS3B01G032100 chr2D 90.227 440 32 4 433 866 303084351 303083917 6.660000e-157 564.0
50 TraesCS3B01G032100 chr5A 92.500 160 12 0 2577 2736 320214248 320214407 2.760000e-56 230.0
51 TraesCS3B01G032100 chr4D 92.405 158 12 0 2577 2734 34661684 34661527 3.570000e-55 226.0
52 TraesCS3B01G032100 chr4D 92.453 159 10 2 2577 2735 401095856 401095700 3.570000e-55 226.0
53 TraesCS3B01G032100 chr4D 90.968 155 13 1 438 591 156375821 156375975 1.290000e-49 207.0
54 TraesCS3B01G032100 chr7A 91.875 160 13 0 2578 2737 59407063 59406904 1.280000e-54 224.0
55 TraesCS3B01G032100 chr7A 88.618 123 13 1 433 554 642696013 642695891 7.950000e-32 148.0
56 TraesCS3B01G032100 chr4A 90.260 154 14 1 430 582 298304871 298305024 2.160000e-47 200.0
57 TraesCS3B01G032100 chr4A 90.278 72 3 4 875 946 360652828 360652761 1.360000e-14 91.6
58 TraesCS3B01G032100 chr1A 90.244 123 11 1 433 554 129870275 129870153 3.670000e-35 159.0
59 TraesCS3B01G032100 chr1A 92.754 69 4 1 887 955 592070896 592070829 8.120000e-17 99.0
60 TraesCS3B01G032100 chr2B 93.243 74 3 2 875 947 15714406 15714478 1.350000e-19 108.0
61 TraesCS3B01G032100 chr2B 93.243 74 3 2 875 947 15850599 15850671 1.350000e-19 108.0
62 TraesCS3B01G032100 chr2B 93.243 74 3 2 875 947 15949213 15949285 1.350000e-19 108.0
63 TraesCS3B01G032100 chr5D 95.238 63 3 0 894 956 462455270 462455208 2.260000e-17 100.0
64 TraesCS3B01G032100 chr5D 88.608 79 5 4 875 950 286953745 286953668 3.780000e-15 93.5
65 TraesCS3B01G032100 chr7D 90.789 76 2 4 875 946 45636117 45636191 2.920000e-16 97.1
66 TraesCS3B01G032100 chr6B 94.118 51 3 0 382 432 603158327 603158277 1.060000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G032100 chr3B 14546111 14549665 3554 False 6565.000000 6565 100.000000 1 3555 1 chr3B.!!$F1 3554
1 TraesCS3B01G032100 chr3B 26812017 26813320 1303 False 1437.000000 1437 86.622000 1230 2555 1 chr3B.!!$F2 1325
2 TraesCS3B01G032100 chr3B 26757187 26759314 2127 False 1248.000000 1821 88.897000 372 2555 2 chr3B.!!$F6 2183
3 TraesCS3B01G032100 chr3B 14963438 14965511 2073 False 955.333333 1279 91.463000 1428 3530 3 chr3B.!!$F5 2102
4 TraesCS3B01G032100 chr3B 14413763 14416052 2289 True 816.333333 1070 88.510000 1599 3553 3 chr3B.!!$R1 1954
5 TraesCS3B01G032100 chr3B 26745870 26748251 2381 True 654.000000 1188 87.152000 986 3174 4 chr3B.!!$R4 2188
6 TraesCS3B01G032100 chr3B 14469588 14470977 1389 True 446.666667 911 87.646000 1718 3122 3 chr3B.!!$R2 1404
7 TraesCS3B01G032100 chr3B 14474978 14475757 779 True 237.000000 296 79.510000 438 1296 2 chr3B.!!$R3 858
8 TraesCS3B01G032100 chr3D 10408527 10411369 2842 True 1254.000000 2185 90.725667 426 3476 3 chr3D.!!$R1 3050
9 TraesCS3B01G032100 chr3D 10530475 10533723 3248 False 1088.000000 2167 93.735500 462 3555 4 chr3D.!!$F2 3093
10 TraesCS3B01G032100 chr3D 10460248 10462305 2057 False 789.333333 1245 89.370333 1417 3555 3 chr3D.!!$F1 2138
11 TraesCS3B01G032100 chr3A 16619560 16622704 3144 True 1404.333333 2093 90.976333 372 3555 3 chr3A.!!$R3 3183
12 TraesCS3B01G032100 chr3A 16662520 16664264 1744 False 260.000000 418 82.331000 1165 3161 2 chr3A.!!$F3 1996

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
360 361 0.038251 AGCTTCGCGTGATTGTCTCA 60.038 50.0 5.77 0.0 0.0 3.27 F
1942 2364 0.093026 CGAAACTACCTTCAAGCGCG 59.907 55.0 0.00 0.0 0.0 6.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1946 2368 0.179000 ATCAGACGTTCCATCCCAGC 59.821 55.000 0.0 0.0 0.0 4.85 R
2951 3924 3.181826 TGACACGATTTAAAAGCAGCG 57.818 42.857 0.0 0.0 0.0 5.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.809446 CAATGATCCACTAACGCTCGA 58.191 47.619 0.00 0.00 0.00 4.04
21 22 3.186909 CAATGATCCACTAACGCTCGAA 58.813 45.455 0.00 0.00 0.00 3.71
22 23 2.561733 TGATCCACTAACGCTCGAAG 57.438 50.000 0.00 0.00 0.00 3.79
23 24 1.201343 GATCCACTAACGCTCGAAGC 58.799 55.000 0.00 0.00 38.02 3.86
24 25 0.530744 ATCCACTAACGCTCGAAGCA 59.469 50.000 7.47 0.00 42.58 3.91
25 26 0.530744 TCCACTAACGCTCGAAGCAT 59.469 50.000 7.47 0.00 42.58 3.79
26 27 1.067142 TCCACTAACGCTCGAAGCATT 60.067 47.619 7.47 1.52 42.58 3.56
27 28 2.164827 TCCACTAACGCTCGAAGCATTA 59.835 45.455 7.47 2.49 42.58 1.90
29 30 2.912900 CTAACGCTCGAAGCATTAGC 57.087 50.000 8.85 0.00 39.62 3.09
30 31 2.193447 CTAACGCTCGAAGCATTAGCA 58.807 47.619 8.85 0.00 39.62 3.49
31 32 1.002366 AACGCTCGAAGCATTAGCAG 58.998 50.000 7.47 0.00 42.58 4.24
32 33 0.108615 ACGCTCGAAGCATTAGCAGT 60.109 50.000 7.47 0.00 42.58 4.40
33 34 0.574454 CGCTCGAAGCATTAGCAGTC 59.426 55.000 7.47 0.00 42.58 3.51
34 35 1.645034 GCTCGAAGCATTAGCAGTCA 58.355 50.000 2.53 0.00 45.49 3.41
35 36 1.592081 GCTCGAAGCATTAGCAGTCAG 59.408 52.381 2.53 0.00 45.49 3.51
36 37 2.736719 GCTCGAAGCATTAGCAGTCAGA 60.737 50.000 2.53 0.00 45.49 3.27
37 38 3.114809 CTCGAAGCATTAGCAGTCAGAG 58.885 50.000 0.00 0.00 45.49 3.35
38 39 2.755103 TCGAAGCATTAGCAGTCAGAGA 59.245 45.455 0.00 0.00 45.49 3.10
39 40 3.114809 CGAAGCATTAGCAGTCAGAGAG 58.885 50.000 0.00 0.00 45.49 3.20
40 41 3.456280 GAAGCATTAGCAGTCAGAGAGG 58.544 50.000 0.00 0.00 45.49 3.69
41 42 1.138661 AGCATTAGCAGTCAGAGAGGC 59.861 52.381 0.00 0.00 45.49 4.70
42 43 1.138661 GCATTAGCAGTCAGAGAGGCT 59.861 52.381 0.00 0.00 41.58 4.58
43 44 2.419851 GCATTAGCAGTCAGAGAGGCTT 60.420 50.000 0.00 0.00 41.58 4.35
44 45 3.871485 CATTAGCAGTCAGAGAGGCTTT 58.129 45.455 0.00 0.00 37.79 3.51
45 46 3.325293 TTAGCAGTCAGAGAGGCTTTG 57.675 47.619 0.00 0.00 37.79 2.77
46 47 0.324285 AGCAGTCAGAGAGGCTTTGG 59.676 55.000 0.00 0.00 31.34 3.28
47 48 1.304509 GCAGTCAGAGAGGCTTTGGC 61.305 60.000 0.00 0.00 37.82 4.52
48 49 1.018226 CAGTCAGAGAGGCTTTGGCG 61.018 60.000 0.00 0.00 39.81 5.69
49 50 2.046892 TCAGAGAGGCTTTGGCGC 60.047 61.111 0.00 0.00 39.81 6.53
50 51 2.046507 CAGAGAGGCTTTGGCGCT 60.047 61.111 7.64 0.00 41.24 5.92
51 52 1.673665 CAGAGAGGCTTTGGCGCTT 60.674 57.895 7.64 0.00 38.44 4.68
52 53 1.673665 AGAGAGGCTTTGGCGCTTG 60.674 57.895 7.64 0.00 38.44 4.01
53 54 3.333898 GAGAGGCTTTGGCGCTTGC 62.334 63.158 7.64 6.64 38.44 4.01
63 64 3.414272 GCGCTTGCCGATGATCTT 58.586 55.556 0.00 0.00 40.02 2.40
64 65 2.605094 GCGCTTGCCGATGATCTTA 58.395 52.632 0.00 0.00 40.02 2.10
65 66 0.937304 GCGCTTGCCGATGATCTTAA 59.063 50.000 0.00 0.00 40.02 1.85
66 67 1.532868 GCGCTTGCCGATGATCTTAAT 59.467 47.619 0.00 0.00 40.02 1.40
67 68 2.736721 GCGCTTGCCGATGATCTTAATA 59.263 45.455 0.00 0.00 40.02 0.98
68 69 3.181526 GCGCTTGCCGATGATCTTAATAG 60.182 47.826 0.00 0.00 40.02 1.73
69 70 3.990469 CGCTTGCCGATGATCTTAATAGT 59.010 43.478 0.00 0.00 40.02 2.12
70 71 4.090642 CGCTTGCCGATGATCTTAATAGTC 59.909 45.833 0.00 0.00 40.02 2.59
71 72 4.090642 GCTTGCCGATGATCTTAATAGTCG 59.909 45.833 0.00 0.00 0.00 4.18
72 73 3.575630 TGCCGATGATCTTAATAGTCGC 58.424 45.455 0.00 0.00 0.00 5.19
73 74 3.005367 TGCCGATGATCTTAATAGTCGCA 59.995 43.478 0.00 0.00 0.00 5.10
74 75 3.610242 GCCGATGATCTTAATAGTCGCAG 59.390 47.826 0.00 0.00 0.00 5.18
75 76 4.616143 GCCGATGATCTTAATAGTCGCAGA 60.616 45.833 0.00 0.00 0.00 4.26
76 77 5.461526 CCGATGATCTTAATAGTCGCAGAA 58.538 41.667 0.00 0.00 39.69 3.02
77 78 6.096036 CCGATGATCTTAATAGTCGCAGAAT 58.904 40.000 0.00 0.00 39.69 2.40
78 79 7.251281 CCGATGATCTTAATAGTCGCAGAATA 58.749 38.462 0.00 0.00 42.75 1.75
79 80 7.219154 CCGATGATCTTAATAGTCGCAGAATAC 59.781 40.741 0.00 0.00 40.87 1.89
80 81 7.750903 CGATGATCTTAATAGTCGCAGAATACA 59.249 37.037 0.00 0.00 40.87 2.29
81 82 9.579768 GATGATCTTAATAGTCGCAGAATACAT 57.420 33.333 0.00 0.00 40.87 2.29
82 83 8.748380 TGATCTTAATAGTCGCAGAATACATG 57.252 34.615 0.00 0.00 40.87 3.21
83 84 8.360390 TGATCTTAATAGTCGCAGAATACATGT 58.640 33.333 2.69 2.69 40.87 3.21
84 85 8.749841 ATCTTAATAGTCGCAGAATACATGTC 57.250 34.615 0.00 0.00 40.87 3.06
85 86 6.856426 TCTTAATAGTCGCAGAATACATGTCG 59.144 38.462 0.00 0.00 40.87 4.35
86 87 1.560923 AGTCGCAGAATACATGTCGC 58.439 50.000 0.00 0.00 39.69 5.19
87 88 1.135139 AGTCGCAGAATACATGTCGCT 59.865 47.619 0.00 0.00 39.69 4.93
88 89 2.357952 AGTCGCAGAATACATGTCGCTA 59.642 45.455 0.00 0.00 39.69 4.26
89 90 2.468040 GTCGCAGAATACATGTCGCTAC 59.532 50.000 0.00 0.00 39.69 3.58
90 91 2.357952 TCGCAGAATACATGTCGCTACT 59.642 45.455 0.00 0.00 0.00 2.57
91 92 2.469147 CGCAGAATACATGTCGCTACTG 59.531 50.000 0.00 7.74 0.00 2.74
92 93 3.706698 GCAGAATACATGTCGCTACTGA 58.293 45.455 0.00 0.00 0.00 3.41
93 94 3.487574 GCAGAATACATGTCGCTACTGAC 59.512 47.826 0.00 0.59 39.37 3.51
94 95 4.734989 GCAGAATACATGTCGCTACTGACT 60.735 45.833 0.00 0.00 39.64 3.41
95 96 4.737279 CAGAATACATGTCGCTACTGACTG 59.263 45.833 0.00 0.00 39.64 3.51
96 97 2.561733 TACATGTCGCTACTGACTGC 57.438 50.000 0.00 0.00 39.64 4.40
97 98 0.603065 ACATGTCGCTACTGACTGCA 59.397 50.000 0.00 0.00 39.64 4.41
98 99 1.000843 ACATGTCGCTACTGACTGCAA 59.999 47.619 0.00 0.00 39.64 4.08
99 100 2.068519 CATGTCGCTACTGACTGCAAA 58.931 47.619 0.00 0.00 39.64 3.68
100 101 1.783284 TGTCGCTACTGACTGCAAAG 58.217 50.000 0.00 0.00 39.64 2.77
101 102 1.068588 TGTCGCTACTGACTGCAAAGT 59.931 47.619 0.00 0.00 39.64 2.66
102 103 2.135933 GTCGCTACTGACTGCAAAGTT 58.864 47.619 2.07 0.00 35.95 2.66
103 104 2.096713 GTCGCTACTGACTGCAAAGTTG 60.097 50.000 2.07 2.23 35.95 3.16
104 105 1.867233 CGCTACTGACTGCAAAGTTGT 59.133 47.619 2.07 0.00 0.00 3.32
105 106 3.057019 CGCTACTGACTGCAAAGTTGTA 58.943 45.455 2.07 0.00 0.00 2.41
106 107 3.120991 CGCTACTGACTGCAAAGTTGTAC 60.121 47.826 2.07 0.00 0.00 2.90
107 108 4.058817 GCTACTGACTGCAAAGTTGTACT 58.941 43.478 2.07 0.00 0.00 2.73
108 109 4.084328 GCTACTGACTGCAAAGTTGTACTG 60.084 45.833 2.07 0.00 0.00 2.74
109 110 3.206150 ACTGACTGCAAAGTTGTACTGG 58.794 45.455 0.00 0.00 0.00 4.00
110 111 3.118408 ACTGACTGCAAAGTTGTACTGGA 60.118 43.478 0.00 0.00 0.00 3.86
111 112 3.202906 TGACTGCAAAGTTGTACTGGAC 58.797 45.455 0.00 0.00 0.00 4.02
112 113 2.210116 ACTGCAAAGTTGTACTGGACG 58.790 47.619 0.00 0.00 0.00 4.79
113 114 2.159014 ACTGCAAAGTTGTACTGGACGA 60.159 45.455 0.00 0.00 0.00 4.20
114 115 2.206750 TGCAAAGTTGTACTGGACGAC 58.793 47.619 1.88 1.88 42.21 4.34
115 116 2.206750 GCAAAGTTGTACTGGACGACA 58.793 47.619 12.85 0.00 44.09 4.35
116 117 2.806244 GCAAAGTTGTACTGGACGACAT 59.194 45.455 12.85 0.00 44.09 3.06
117 118 3.120649 GCAAAGTTGTACTGGACGACATC 60.121 47.826 12.85 0.00 44.09 3.06
118 119 4.055360 CAAAGTTGTACTGGACGACATCA 58.945 43.478 12.85 0.00 44.09 3.07
119 120 4.330944 AAGTTGTACTGGACGACATCAA 57.669 40.909 12.85 0.00 44.09 2.57
120 121 3.914312 AGTTGTACTGGACGACATCAAG 58.086 45.455 12.85 0.00 44.09 3.02
121 122 3.572682 AGTTGTACTGGACGACATCAAGA 59.427 43.478 12.85 0.00 44.09 3.02
122 123 4.038763 AGTTGTACTGGACGACATCAAGAA 59.961 41.667 12.85 0.00 44.09 2.52
123 124 3.909430 TGTACTGGACGACATCAAGAAC 58.091 45.455 0.00 0.00 31.90 3.01
124 125 3.319689 TGTACTGGACGACATCAAGAACA 59.680 43.478 0.00 0.00 31.90 3.18
125 126 3.469008 ACTGGACGACATCAAGAACAA 57.531 42.857 0.00 0.00 31.90 2.83
126 127 3.804036 ACTGGACGACATCAAGAACAAA 58.196 40.909 0.00 0.00 31.90 2.83
127 128 4.196193 ACTGGACGACATCAAGAACAAAA 58.804 39.130 0.00 0.00 31.90 2.44
128 129 4.035208 ACTGGACGACATCAAGAACAAAAC 59.965 41.667 0.00 0.00 31.90 2.43
129 130 3.942115 TGGACGACATCAAGAACAAAACA 59.058 39.130 0.00 0.00 0.00 2.83
130 131 4.201871 TGGACGACATCAAGAACAAAACAC 60.202 41.667 0.00 0.00 0.00 3.32
131 132 4.279659 GACGACATCAAGAACAAAACACC 58.720 43.478 0.00 0.00 0.00 4.16
132 133 3.692101 ACGACATCAAGAACAAAACACCA 59.308 39.130 0.00 0.00 0.00 4.17
133 134 4.201910 ACGACATCAAGAACAAAACACCAG 60.202 41.667 0.00 0.00 0.00 4.00
134 135 4.044426 GACATCAAGAACAAAACACCAGC 58.956 43.478 0.00 0.00 0.00 4.85
135 136 3.701040 ACATCAAGAACAAAACACCAGCT 59.299 39.130 0.00 0.00 0.00 4.24
136 137 4.887071 ACATCAAGAACAAAACACCAGCTA 59.113 37.500 0.00 0.00 0.00 3.32
137 138 5.536161 ACATCAAGAACAAAACACCAGCTAT 59.464 36.000 0.00 0.00 0.00 2.97
138 139 5.689383 TCAAGAACAAAACACCAGCTATC 57.311 39.130 0.00 0.00 0.00 2.08
139 140 5.376625 TCAAGAACAAAACACCAGCTATCT 58.623 37.500 0.00 0.00 0.00 1.98
140 141 6.530120 TCAAGAACAAAACACCAGCTATCTA 58.470 36.000 0.00 0.00 0.00 1.98
141 142 7.168219 TCAAGAACAAAACACCAGCTATCTAT 58.832 34.615 0.00 0.00 0.00 1.98
142 143 6.992063 AGAACAAAACACCAGCTATCTATG 57.008 37.500 0.00 0.00 0.00 2.23
143 144 5.882557 AGAACAAAACACCAGCTATCTATGG 59.117 40.000 0.00 0.00 42.60 2.74
144 145 5.435686 ACAAAACACCAGCTATCTATGGA 57.564 39.130 0.00 0.00 39.02 3.41
145 146 5.431765 ACAAAACACCAGCTATCTATGGAG 58.568 41.667 0.00 0.00 39.02 3.86
146 147 3.760580 AACACCAGCTATCTATGGAGC 57.239 47.619 0.00 0.00 39.02 4.70
163 164 4.784177 TGGAGCTATTCTGCATGAAATCA 58.216 39.130 0.00 0.00 38.28 2.57
164 165 5.382616 TGGAGCTATTCTGCATGAAATCAT 58.617 37.500 0.00 0.00 38.28 2.45
165 166 6.536447 TGGAGCTATTCTGCATGAAATCATA 58.464 36.000 0.00 0.00 38.28 2.15
166 167 6.653740 TGGAGCTATTCTGCATGAAATCATAG 59.346 38.462 0.00 0.00 38.28 2.23
167 168 6.877855 GGAGCTATTCTGCATGAAATCATAGA 59.122 38.462 0.00 0.00 38.29 1.98
168 169 7.148440 GGAGCTATTCTGCATGAAATCATAGAC 60.148 40.741 0.00 0.00 38.29 2.59
169 170 6.654161 AGCTATTCTGCATGAAATCATAGACC 59.346 38.462 0.00 0.00 38.29 3.85
170 171 6.429078 GCTATTCTGCATGAAATCATAGACCA 59.571 38.462 0.00 0.00 38.29 4.02
171 172 7.120873 GCTATTCTGCATGAAATCATAGACCAT 59.879 37.037 0.00 0.00 38.29 3.55
172 173 9.662947 CTATTCTGCATGAAATCATAGACCATA 57.337 33.333 0.00 0.00 38.29 2.74
173 174 7.974482 TTCTGCATGAAATCATAGACCATAG 57.026 36.000 0.00 0.00 34.26 2.23
174 175 7.071069 TCTGCATGAAATCATAGACCATAGT 57.929 36.000 0.00 0.00 34.26 2.12
175 176 7.512130 TCTGCATGAAATCATAGACCATAGTT 58.488 34.615 0.00 0.00 34.26 2.24
176 177 7.658982 TCTGCATGAAATCATAGACCATAGTTC 59.341 37.037 0.00 0.00 34.26 3.01
177 178 6.712095 TGCATGAAATCATAGACCATAGTTCC 59.288 38.462 0.00 0.00 34.26 3.62
178 179 6.712095 GCATGAAATCATAGACCATAGTTCCA 59.288 38.462 0.00 0.00 34.26 3.53
179 180 7.308229 GCATGAAATCATAGACCATAGTTCCAC 60.308 40.741 0.00 0.00 34.26 4.02
180 181 7.437713 TGAAATCATAGACCATAGTTCCACT 57.562 36.000 0.00 0.00 0.00 4.00
181 182 7.861629 TGAAATCATAGACCATAGTTCCACTT 58.138 34.615 0.00 0.00 0.00 3.16
182 183 8.328758 TGAAATCATAGACCATAGTTCCACTTT 58.671 33.333 0.00 0.00 0.00 2.66
183 184 9.178758 GAAATCATAGACCATAGTTCCACTTTT 57.821 33.333 0.00 0.00 0.00 2.27
191 192 8.960591 AGACCATAGTTCCACTTTTATTTCATG 58.039 33.333 0.00 0.00 0.00 3.07
192 193 8.650143 ACCATAGTTCCACTTTTATTTCATGT 57.350 30.769 0.00 0.00 0.00 3.21
193 194 9.747898 ACCATAGTTCCACTTTTATTTCATGTA 57.252 29.630 0.00 0.00 0.00 2.29
196 197 9.975218 ATAGTTCCACTTTTATTTCATGTACCT 57.025 29.630 0.00 0.00 0.00 3.08
197 198 8.706322 AGTTCCACTTTTATTTCATGTACCTT 57.294 30.769 0.00 0.00 0.00 3.50
198 199 9.143155 AGTTCCACTTTTATTTCATGTACCTTT 57.857 29.630 0.00 0.00 0.00 3.11
199 200 9.191995 GTTCCACTTTTATTTCATGTACCTTTG 57.808 33.333 0.00 0.00 0.00 2.77
200 201 8.472007 TCCACTTTTATTTCATGTACCTTTGT 57.528 30.769 0.00 0.00 0.00 2.83
201 202 8.356657 TCCACTTTTATTTCATGTACCTTTGTG 58.643 33.333 0.00 0.00 0.00 3.33
202 203 7.116233 CCACTTTTATTTCATGTACCTTTGTGC 59.884 37.037 0.00 0.00 0.00 4.57
203 204 7.651304 CACTTTTATTTCATGTACCTTTGTGCA 59.349 33.333 0.00 0.00 41.48 4.57
212 213 5.940192 TGTACCTTTGTGCATGAGTTTAG 57.060 39.130 0.00 0.00 31.71 1.85
213 214 4.759693 TGTACCTTTGTGCATGAGTTTAGG 59.240 41.667 0.00 0.00 31.71 2.69
214 215 4.098914 ACCTTTGTGCATGAGTTTAGGA 57.901 40.909 0.00 0.00 0.00 2.94
215 216 4.074970 ACCTTTGTGCATGAGTTTAGGAG 58.925 43.478 0.00 0.00 0.00 3.69
216 217 3.119708 CCTTTGTGCATGAGTTTAGGAGC 60.120 47.826 0.00 0.00 0.00 4.70
217 218 3.423539 TTGTGCATGAGTTTAGGAGCT 57.576 42.857 0.00 0.00 0.00 4.09
218 219 2.977914 TGTGCATGAGTTTAGGAGCTC 58.022 47.619 4.71 4.71 34.08 4.09
219 220 2.284190 GTGCATGAGTTTAGGAGCTCC 58.716 52.381 26.22 26.22 32.65 4.70
220 221 1.908619 TGCATGAGTTTAGGAGCTCCA 59.091 47.619 33.90 17.39 38.89 3.86
221 222 2.305635 TGCATGAGTTTAGGAGCTCCAA 59.694 45.455 33.90 21.95 38.89 3.53
222 223 3.054139 TGCATGAGTTTAGGAGCTCCAAT 60.054 43.478 33.90 17.46 38.89 3.16
223 224 3.950395 GCATGAGTTTAGGAGCTCCAATT 59.050 43.478 33.90 17.30 38.89 2.32
224 225 4.400567 GCATGAGTTTAGGAGCTCCAATTT 59.599 41.667 33.90 16.30 38.89 1.82
225 226 5.449725 GCATGAGTTTAGGAGCTCCAATTTC 60.450 44.000 33.90 22.36 38.89 2.17
226 227 4.253685 TGAGTTTAGGAGCTCCAATTTCG 58.746 43.478 33.90 0.00 38.89 3.46
227 228 4.020573 TGAGTTTAGGAGCTCCAATTTCGA 60.021 41.667 33.90 10.50 38.89 3.71
228 229 4.508662 AGTTTAGGAGCTCCAATTTCGAG 58.491 43.478 33.90 0.00 38.89 4.04
229 230 3.543680 TTAGGAGCTCCAATTTCGAGG 57.456 47.619 33.90 0.00 38.89 4.63
230 231 0.107459 AGGAGCTCCAATTTCGAGGC 60.107 55.000 33.90 2.68 38.89 4.70
231 232 0.107459 GGAGCTCCAATTTCGAGGCT 60.107 55.000 28.43 0.00 35.64 4.58
232 233 1.294857 GAGCTCCAATTTCGAGGCTC 58.705 55.000 0.87 3.87 0.00 4.70
233 234 0.615331 AGCTCCAATTTCGAGGCTCA 59.385 50.000 15.95 0.00 0.00 4.26
234 235 0.729690 GCTCCAATTTCGAGGCTCAC 59.270 55.000 15.95 0.00 0.00 3.51
235 236 1.945819 GCTCCAATTTCGAGGCTCACA 60.946 52.381 15.95 0.00 0.00 3.58
236 237 2.426522 CTCCAATTTCGAGGCTCACAA 58.573 47.619 15.95 6.57 0.00 3.33
237 238 3.012518 CTCCAATTTCGAGGCTCACAAT 58.987 45.455 15.95 8.72 0.00 2.71
238 239 3.009723 TCCAATTTCGAGGCTCACAATC 58.990 45.455 15.95 0.00 0.00 2.67
239 240 3.012518 CCAATTTCGAGGCTCACAATCT 58.987 45.455 15.95 1.04 0.00 2.40
240 241 4.081142 TCCAATTTCGAGGCTCACAATCTA 60.081 41.667 15.95 0.00 0.00 1.98
241 242 4.272018 CCAATTTCGAGGCTCACAATCTAG 59.728 45.833 15.95 5.75 0.00 2.43
242 243 2.586258 TTCGAGGCTCACAATCTAGC 57.414 50.000 15.95 0.00 38.03 3.42
243 244 0.382158 TCGAGGCTCACAATCTAGCG 59.618 55.000 15.95 0.00 39.71 4.26
244 245 0.382158 CGAGGCTCACAATCTAGCGA 59.618 55.000 15.95 0.00 39.71 4.93
245 246 1.202302 CGAGGCTCACAATCTAGCGAA 60.202 52.381 15.95 0.00 39.71 4.70
246 247 2.468831 GAGGCTCACAATCTAGCGAAG 58.531 52.381 10.25 0.00 39.71 3.79
264 265 4.423732 CGAAGCATAGTTTGAATTTGGGG 58.576 43.478 0.00 0.00 0.00 4.96
265 266 4.677779 CGAAGCATAGTTTGAATTTGGGGG 60.678 45.833 0.00 0.00 0.00 5.40
266 267 3.790126 AGCATAGTTTGAATTTGGGGGT 58.210 40.909 0.00 0.00 0.00 4.95
267 268 4.167319 AGCATAGTTTGAATTTGGGGGTT 58.833 39.130 0.00 0.00 0.00 4.11
268 269 4.020307 AGCATAGTTTGAATTTGGGGGTTG 60.020 41.667 0.00 0.00 0.00 3.77
269 270 4.831107 CATAGTTTGAATTTGGGGGTTGG 58.169 43.478 0.00 0.00 0.00 3.77
270 271 1.419762 AGTTTGAATTTGGGGGTTGGC 59.580 47.619 0.00 0.00 0.00 4.52
271 272 0.767998 TTTGAATTTGGGGGTTGGCC 59.232 50.000 0.00 0.00 0.00 5.36
272 273 1.476007 TTGAATTTGGGGGTTGGCCG 61.476 55.000 0.00 0.00 34.97 6.13
273 274 3.309436 GAATTTGGGGGTTGGCCGC 62.309 63.158 0.00 0.00 45.93 6.53
281 282 4.054825 GGTTGGCCGCCATGTGTG 62.055 66.667 14.30 0.00 31.53 3.82
293 294 1.750778 CCATGTGTGGTTAGGCAATCC 59.249 52.381 0.00 0.00 40.83 3.01
294 295 2.621407 CCATGTGTGGTTAGGCAATCCT 60.621 50.000 0.00 0.00 42.39 3.24
295 296 2.198827 TGTGTGGTTAGGCAATCCTG 57.801 50.000 0.00 0.00 44.08 3.86
296 297 1.271871 TGTGTGGTTAGGCAATCCTGG 60.272 52.381 0.00 0.00 44.08 4.45
297 298 1.072266 TGTGGTTAGGCAATCCTGGT 58.928 50.000 0.00 0.00 44.08 4.00
298 299 2.026636 GTGTGGTTAGGCAATCCTGGTA 60.027 50.000 0.00 0.00 44.08 3.25
299 300 2.645297 TGTGGTTAGGCAATCCTGGTAA 59.355 45.455 0.00 0.00 44.08 2.85
300 301 3.268334 TGTGGTTAGGCAATCCTGGTAAT 59.732 43.478 0.00 0.00 44.08 1.89
301 302 3.883489 GTGGTTAGGCAATCCTGGTAATC 59.117 47.826 0.00 0.00 44.08 1.75
302 303 3.785887 TGGTTAGGCAATCCTGGTAATCT 59.214 43.478 0.00 0.00 44.08 2.40
303 304 4.229582 TGGTTAGGCAATCCTGGTAATCTT 59.770 41.667 0.00 0.00 44.08 2.40
304 305 5.201243 GGTTAGGCAATCCTGGTAATCTTT 58.799 41.667 0.00 0.00 44.08 2.52
305 306 5.299531 GGTTAGGCAATCCTGGTAATCTTTC 59.700 44.000 0.00 0.00 44.08 2.62
306 307 4.870021 AGGCAATCCTGGTAATCTTTCT 57.130 40.909 0.00 0.00 42.34 2.52
307 308 5.198602 AGGCAATCCTGGTAATCTTTCTT 57.801 39.130 0.00 0.00 42.34 2.52
308 309 5.583932 AGGCAATCCTGGTAATCTTTCTTT 58.416 37.500 0.00 0.00 42.34 2.52
309 310 6.019108 AGGCAATCCTGGTAATCTTTCTTTT 58.981 36.000 0.00 0.00 42.34 2.27
310 311 6.071165 AGGCAATCCTGGTAATCTTTCTTTTG 60.071 38.462 0.00 0.00 42.34 2.44
311 312 6.295292 GGCAATCCTGGTAATCTTTCTTTTGT 60.295 38.462 0.00 0.00 0.00 2.83
312 313 7.093945 GGCAATCCTGGTAATCTTTCTTTTGTA 60.094 37.037 0.00 0.00 0.00 2.41
313 314 7.755373 GCAATCCTGGTAATCTTTCTTTTGTAC 59.245 37.037 0.00 0.00 0.00 2.90
314 315 7.939784 ATCCTGGTAATCTTTCTTTTGTACC 57.060 36.000 0.00 0.00 33.14 3.34
315 316 7.086685 TCCTGGTAATCTTTCTTTTGTACCT 57.913 36.000 0.00 0.00 33.60 3.08
316 317 7.523415 TCCTGGTAATCTTTCTTTTGTACCTT 58.477 34.615 0.00 0.00 33.60 3.50
317 318 8.002459 TCCTGGTAATCTTTCTTTTGTACCTTT 58.998 33.333 0.00 0.00 33.60 3.11
318 319 8.082242 CCTGGTAATCTTTCTTTTGTACCTTTG 58.918 37.037 0.00 0.00 33.60 2.77
319 320 8.754991 TGGTAATCTTTCTTTTGTACCTTTGA 57.245 30.769 0.00 0.00 33.60 2.69
320 321 9.191479 TGGTAATCTTTCTTTTGTACCTTTGAA 57.809 29.630 0.00 0.00 33.60 2.69
321 322 9.459640 GGTAATCTTTCTTTTGTACCTTTGAAC 57.540 33.333 0.00 0.00 0.00 3.18
325 326 8.925161 TCTTTCTTTTGTACCTTTGAACATTG 57.075 30.769 0.00 0.00 0.00 2.82
326 327 7.978975 TCTTTCTTTTGTACCTTTGAACATTGG 59.021 33.333 0.00 0.00 0.00 3.16
327 328 5.596845 TCTTTTGTACCTTTGAACATTGGC 58.403 37.500 0.00 0.00 0.00 4.52
328 329 5.127845 TCTTTTGTACCTTTGAACATTGGCA 59.872 36.000 0.00 0.00 0.00 4.92
329 330 4.314740 TTGTACCTTTGAACATTGGCAC 57.685 40.909 0.00 0.00 0.00 5.01
330 331 3.291584 TGTACCTTTGAACATTGGCACA 58.708 40.909 0.00 0.00 0.00 4.57
347 348 5.457140 TGGCACAAGTTAAATAAAGCTTCG 58.543 37.500 0.00 0.00 31.92 3.79
348 349 4.323602 GGCACAAGTTAAATAAAGCTTCGC 59.676 41.667 0.00 0.00 0.00 4.70
349 350 4.029087 GCACAAGTTAAATAAAGCTTCGCG 59.971 41.667 0.00 0.00 0.00 5.87
350 351 5.144359 CACAAGTTAAATAAAGCTTCGCGT 58.856 37.500 5.77 0.00 0.00 6.01
351 352 5.058008 CACAAGTTAAATAAAGCTTCGCGTG 59.942 40.000 5.77 1.17 0.00 5.34
352 353 5.049954 ACAAGTTAAATAAAGCTTCGCGTGA 60.050 36.000 5.77 0.00 0.00 4.35
353 354 5.796350 AGTTAAATAAAGCTTCGCGTGAT 57.204 34.783 5.77 0.00 0.00 3.06
354 355 6.178239 AGTTAAATAAAGCTTCGCGTGATT 57.822 33.333 5.77 2.43 0.00 2.57
355 356 6.021596 AGTTAAATAAAGCTTCGCGTGATTG 58.978 36.000 5.77 0.00 0.00 2.67
356 357 4.419522 AAATAAAGCTTCGCGTGATTGT 57.580 36.364 5.77 0.36 0.00 2.71
357 358 3.658351 ATAAAGCTTCGCGTGATTGTC 57.342 42.857 5.77 0.00 0.00 3.18
358 359 1.512926 AAAGCTTCGCGTGATTGTCT 58.487 45.000 5.77 0.00 0.00 3.41
359 360 1.071605 AAGCTTCGCGTGATTGTCTC 58.928 50.000 5.77 0.00 0.00 3.36
360 361 0.038251 AGCTTCGCGTGATTGTCTCA 60.038 50.000 5.77 0.00 0.00 3.27
361 362 0.790207 GCTTCGCGTGATTGTCTCAA 59.210 50.000 5.77 0.00 35.07 3.02
362 363 1.194547 GCTTCGCGTGATTGTCTCAAA 59.805 47.619 5.77 0.00 35.07 2.69
363 364 2.349438 GCTTCGCGTGATTGTCTCAAAA 60.349 45.455 5.77 0.00 35.07 2.44
364 365 3.848191 GCTTCGCGTGATTGTCTCAAAAA 60.848 43.478 5.77 0.00 35.07 1.94
454 474 2.899505 GAGGAGCAGCCAGGAGTC 59.100 66.667 0.00 0.00 40.02 3.36
558 599 3.251972 CCTTTGGACTGCTTCTTCTTGAC 59.748 47.826 0.00 0.00 0.00 3.18
581 622 7.124573 ACATTATCTCCAGTTGCATGTAGTA 57.875 36.000 0.00 0.00 0.00 1.82
605 646 4.407296 ACTGGTCCTCTACTGAATTGATCC 59.593 45.833 0.00 0.00 0.00 3.36
634 675 4.440839 AATTAACACAAAGCAGCCTAGC 57.559 40.909 0.00 0.00 0.00 3.42
658 699 7.706607 AGCTATTTCTCAACCAAAACAGAAAAC 59.293 33.333 0.00 0.00 38.15 2.43
745 797 4.436998 CCAGTCCGGAGTGTCGCC 62.437 72.222 32.24 8.17 36.56 5.54
786 838 5.437263 GCAGAAACACATGAAGCATTTTTG 58.563 37.500 0.00 0.00 0.00 2.44
851 905 2.489722 GTGGAACAGGGAAGCAGATTTC 59.510 50.000 0.00 0.00 41.80 2.17
874 928 2.362077 GAGGCTGTTTGTGTTGACCAAT 59.638 45.455 0.00 0.00 0.00 3.16
875 929 3.561143 AGGCTGTTTGTGTTGACCAATA 58.439 40.909 0.00 0.00 0.00 1.90
876 930 3.317993 AGGCTGTTTGTGTTGACCAATAC 59.682 43.478 3.17 3.17 33.71 1.89
877 931 3.317993 GGCTGTTTGTGTTGACCAATACT 59.682 43.478 10.22 0.00 34.16 2.12
878 932 4.537015 GCTGTTTGTGTTGACCAATACTC 58.463 43.478 10.22 3.48 34.16 2.59
879 933 4.275936 GCTGTTTGTGTTGACCAATACTCT 59.724 41.667 10.22 0.00 34.16 3.24
880 934 5.560953 GCTGTTTGTGTTGACCAATACTCTC 60.561 44.000 10.22 2.95 34.16 3.20
881 935 5.680619 TGTTTGTGTTGACCAATACTCTCT 58.319 37.500 10.22 0.00 34.16 3.10
882 936 5.758296 TGTTTGTGTTGACCAATACTCTCTC 59.242 40.000 10.22 0.33 34.16 3.20
883 937 4.537135 TGTGTTGACCAATACTCTCTCC 57.463 45.455 10.22 0.00 34.16 3.71
884 938 3.056821 TGTGTTGACCAATACTCTCTCCG 60.057 47.826 10.22 0.00 34.16 4.63
885 939 3.056749 GTGTTGACCAATACTCTCTCCGT 60.057 47.826 2.94 0.00 30.96 4.69
886 940 3.576982 TGTTGACCAATACTCTCTCCGTT 59.423 43.478 0.00 0.00 0.00 4.44
887 941 4.174762 GTTGACCAATACTCTCTCCGTTC 58.825 47.826 0.00 0.00 0.00 3.95
888 942 2.758979 TGACCAATACTCTCTCCGTTCC 59.241 50.000 0.00 0.00 0.00 3.62
889 943 2.758979 GACCAATACTCTCTCCGTTCCA 59.241 50.000 0.00 0.00 0.00 3.53
890 944 3.170717 ACCAATACTCTCTCCGTTCCAA 58.829 45.455 0.00 0.00 0.00 3.53
891 945 3.581332 ACCAATACTCTCTCCGTTCCAAA 59.419 43.478 0.00 0.00 0.00 3.28
892 946 4.041198 ACCAATACTCTCTCCGTTCCAAAA 59.959 41.667 0.00 0.00 0.00 2.44
893 947 5.186198 CCAATACTCTCTCCGTTCCAAAAT 58.814 41.667 0.00 0.00 0.00 1.82
894 948 5.648092 CCAATACTCTCTCCGTTCCAAAATT 59.352 40.000 0.00 0.00 0.00 1.82
895 949 6.821665 CCAATACTCTCTCCGTTCCAAAATTA 59.178 38.462 0.00 0.00 0.00 1.40
896 950 7.011482 CCAATACTCTCTCCGTTCCAAAATTAG 59.989 40.741 0.00 0.00 0.00 1.73
897 951 5.485209 ACTCTCTCCGTTCCAAAATTAGT 57.515 39.130 0.00 0.00 0.00 2.24
898 952 6.600882 ACTCTCTCCGTTCCAAAATTAGTA 57.399 37.500 0.00 0.00 0.00 1.82
899 953 6.396450 ACTCTCTCCGTTCCAAAATTAGTAC 58.604 40.000 0.00 0.00 0.00 2.73
900 954 6.014840 ACTCTCTCCGTTCCAAAATTAGTACA 60.015 38.462 0.00 0.00 0.00 2.90
901 955 6.761312 TCTCTCCGTTCCAAAATTAGTACAA 58.239 36.000 0.00 0.00 0.00 2.41
902 956 7.218614 TCTCTCCGTTCCAAAATTAGTACAAA 58.781 34.615 0.00 0.00 0.00 2.83
903 957 7.386848 TCTCTCCGTTCCAAAATTAGTACAAAG 59.613 37.037 0.00 0.00 0.00 2.77
904 958 6.993902 TCTCCGTTCCAAAATTAGTACAAAGT 59.006 34.615 0.00 0.00 0.00 2.66
905 959 7.499895 TCTCCGTTCCAAAATTAGTACAAAGTT 59.500 33.333 0.00 0.00 0.00 2.66
906 960 8.674263 TCCGTTCCAAAATTAGTACAAAGTTA 57.326 30.769 0.00 0.00 0.00 2.24
907 961 8.776470 TCCGTTCCAAAATTAGTACAAAGTTAG 58.224 33.333 0.00 0.00 0.00 2.34
908 962 8.562052 CCGTTCCAAAATTAGTACAAAGTTAGT 58.438 33.333 0.00 0.00 0.00 2.24
921 975 9.716531 AGTACAAAGTTAGTATAAAGTTGGGTC 57.283 33.333 0.00 0.00 0.00 4.46
922 976 9.492973 GTACAAAGTTAGTATAAAGTTGGGTCA 57.507 33.333 0.00 0.00 0.00 4.02
924 978 9.227777 ACAAAGTTAGTATAAAGTTGGGTCATC 57.772 33.333 0.00 0.00 0.00 2.92
925 979 9.449719 CAAAGTTAGTATAAAGTTGGGTCATCT 57.550 33.333 0.00 0.00 0.00 2.90
936 990 6.254281 AGTTGGGTCATCTATTTTGAAACG 57.746 37.500 0.00 0.00 0.00 3.60
937 991 5.183140 AGTTGGGTCATCTATTTTGAAACGG 59.817 40.000 0.00 0.00 0.00 4.44
938 992 4.912586 TGGGTCATCTATTTTGAAACGGA 58.087 39.130 0.00 0.00 0.00 4.69
939 993 4.941263 TGGGTCATCTATTTTGAAACGGAG 59.059 41.667 0.00 0.00 0.00 4.63
940 994 4.335594 GGGTCATCTATTTTGAAACGGAGG 59.664 45.833 0.00 0.00 0.00 4.30
941 995 4.335594 GGTCATCTATTTTGAAACGGAGGG 59.664 45.833 0.00 0.00 0.00 4.30
942 996 5.183228 GTCATCTATTTTGAAACGGAGGGA 58.817 41.667 0.00 0.00 0.00 4.20
943 997 5.294552 GTCATCTATTTTGAAACGGAGGGAG 59.705 44.000 0.00 0.00 0.00 4.30
1003 1057 1.202758 AGTGAGTTTTGGTGGCGATGA 60.203 47.619 0.00 0.00 0.00 2.92
1043 1097 3.427598 GACGAGTAGAAGCCCCGGC 62.428 68.421 0.00 0.00 42.33 6.13
1064 1118 4.479993 GGGACAGAGCAGCGGCAT 62.480 66.667 12.44 0.00 44.61 4.40
1065 1119 2.894387 GGACAGAGCAGCGGCATC 60.894 66.667 12.44 5.92 44.61 3.91
1066 1120 3.260483 GACAGAGCAGCGGCATCG 61.260 66.667 12.44 0.42 44.61 3.84
1067 1121 4.827087 ACAGAGCAGCGGCATCGG 62.827 66.667 12.44 8.94 44.61 4.18
1126 1180 0.107703 CTGCCCCGTCTGCTTTCATA 60.108 55.000 0.00 0.00 0.00 2.15
1128 1182 1.429148 GCCCCGTCTGCTTTCATACG 61.429 60.000 0.00 0.00 40.90 3.06
1132 1186 0.567968 CGTCTGCTTTCATACGCTCG 59.432 55.000 0.00 0.00 36.32 5.03
1154 1208 4.018597 CGGACCTCCTATATACCAGGTACT 60.019 50.000 0.00 0.00 39.49 2.73
1280 1399 4.503296 GCATGGAACGGAGTAGATATGGTT 60.503 45.833 0.00 0.00 45.00 3.67
1317 1436 6.939132 TTCCGTAGAGAATTAGGACACTAG 57.061 41.667 0.00 0.00 0.00 2.57
1383 1505 6.212791 TGTTTATTAGTCTACAGCTGTTCCCT 59.787 38.462 27.06 18.99 0.00 4.20
1384 1506 7.398047 TGTTTATTAGTCTACAGCTGTTCCCTA 59.602 37.037 27.06 17.99 0.00 3.53
1385 1507 7.584122 TTATTAGTCTACAGCTGTTCCCTAG 57.416 40.000 27.06 15.96 0.00 3.02
1472 1733 9.904198 TTATTGAGACAACATGGATCAGAATAA 57.096 29.630 0.00 2.62 0.00 1.40
1582 1854 2.288886 ACCGTTTTCTAGTCCACAGCTC 60.289 50.000 0.00 0.00 0.00 4.09
1715 2114 7.651808 ACAACTTCAAATTTACAGACTCATGG 58.348 34.615 0.00 0.00 0.00 3.66
1716 2115 7.285401 ACAACTTCAAATTTACAGACTCATGGT 59.715 33.333 0.00 0.00 0.00 3.55
1823 2235 5.712152 AAAAGTTTTTCTCGCATGAGGAT 57.288 34.783 0.00 0.00 42.79 3.24
1883 2305 2.988010 TTCATATGCTCGTCTTGCCT 57.012 45.000 0.00 0.00 0.00 4.75
1942 2364 0.093026 CGAAACTACCTTCAAGCGCG 59.907 55.000 0.00 0.00 0.00 6.86
1944 2366 0.953960 AAACTACCTTCAAGCGCGGG 60.954 55.000 8.83 0.82 0.00 6.13
1946 2368 2.047655 TACCTTCAAGCGCGGGTG 60.048 61.111 8.83 11.12 33.74 4.61
1963 2385 1.021390 GTGCTGGGATGGAACGTCTG 61.021 60.000 0.00 0.00 0.00 3.51
2138 2560 1.369091 CCTTGAACATTCCGCCTCCG 61.369 60.000 0.00 0.00 0.00 4.63
2362 2784 7.193377 TGGTTCCTTTTTGAACGACTATTAC 57.807 36.000 0.00 0.00 44.43 1.89
2378 2800 6.851837 CGACTATTACCAGAGATCAGTTTACG 59.148 42.308 0.00 0.00 0.00 3.18
2528 2951 1.530323 AAAGGTGCGTGAACCCATAC 58.470 50.000 0.00 0.00 41.54 2.39
2567 3467 4.393680 GCGGTGTATGATTGAAGTGGTAAA 59.606 41.667 0.00 0.00 0.00 2.01
2571 3471 7.305474 GGTGTATGATTGAAGTGGTAAAGTTG 58.695 38.462 0.00 0.00 0.00 3.16
2891 3861 1.227999 ATTGTGACACCGCCGTGAAG 61.228 55.000 12.29 0.00 43.14 3.02
2941 3914 3.273434 GGTTCTGCTGACTGATGCAATA 58.727 45.455 0.00 0.00 38.81 1.90
2945 3918 6.038603 GGTTCTGCTGACTGATGCAATATTTA 59.961 38.462 0.00 0.00 38.81 1.40
2948 3921 7.868775 TCTGCTGACTGATGCAATATTTATTC 58.131 34.615 0.00 0.00 38.81 1.75
2951 3924 8.347771 TGCTGACTGATGCAATATTTATTCTTC 58.652 33.333 0.00 0.00 36.15 2.87
3020 4286 7.701924 TCAAATGCTCTTTGTAACAAGTGAAAG 59.298 33.333 10.70 0.00 0.00 2.62
3329 4628 1.152030 TGGTCAGCAGTCCCCTCTT 60.152 57.895 0.00 0.00 0.00 2.85
3401 4700 7.476540 TTGCCACTATTAAGACAGACTAAGA 57.523 36.000 0.00 0.00 0.00 2.10
3507 4809 3.262151 TCCATTCCATTTACAGACACCGA 59.738 43.478 0.00 0.00 0.00 4.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 3.448686 CTTCGAGCGTTAGTGGATCATT 58.551 45.455 0.00 0.00 0.00 2.57
4 5 1.201343 GCTTCGAGCGTTAGTGGATC 58.799 55.000 0.00 0.00 0.00 3.36
5 6 0.530744 TGCTTCGAGCGTTAGTGGAT 59.469 50.000 3.08 0.00 46.26 3.41
6 7 0.530744 ATGCTTCGAGCGTTAGTGGA 59.469 50.000 3.08 0.00 46.26 4.02
13 14 0.108615 ACTGCTAATGCTTCGAGCGT 60.109 50.000 3.08 0.08 46.26 5.07
14 15 0.574454 GACTGCTAATGCTTCGAGCG 59.426 55.000 3.08 0.00 46.26 5.03
15 16 1.592081 CTGACTGCTAATGCTTCGAGC 59.408 52.381 0.58 0.58 42.82 5.03
16 17 3.114809 CTCTGACTGCTAATGCTTCGAG 58.885 50.000 0.00 0.00 40.48 4.04
17 18 2.755103 TCTCTGACTGCTAATGCTTCGA 59.245 45.455 0.00 0.00 40.48 3.71
18 19 3.114809 CTCTCTGACTGCTAATGCTTCG 58.885 50.000 0.00 0.00 40.48 3.79
19 20 3.456280 CCTCTCTGACTGCTAATGCTTC 58.544 50.000 0.00 0.00 40.48 3.86
20 21 2.419851 GCCTCTCTGACTGCTAATGCTT 60.420 50.000 0.00 0.00 40.48 3.91
21 22 1.138661 GCCTCTCTGACTGCTAATGCT 59.861 52.381 0.00 0.00 40.48 3.79
22 23 1.138661 AGCCTCTCTGACTGCTAATGC 59.861 52.381 0.00 0.00 40.20 3.56
23 24 3.540314 AAGCCTCTCTGACTGCTAATG 57.460 47.619 0.00 0.00 32.82 1.90
24 25 3.370315 CCAAAGCCTCTCTGACTGCTAAT 60.370 47.826 0.00 0.00 32.82 1.73
25 26 2.027745 CCAAAGCCTCTCTGACTGCTAA 60.028 50.000 0.00 0.00 32.82 3.09
26 27 1.552337 CCAAAGCCTCTCTGACTGCTA 59.448 52.381 0.00 0.00 32.82 3.49
27 28 0.324285 CCAAAGCCTCTCTGACTGCT 59.676 55.000 0.00 0.00 35.08 4.24
28 29 1.304509 GCCAAAGCCTCTCTGACTGC 61.305 60.000 0.00 0.00 0.00 4.40
29 30 1.018226 CGCCAAAGCCTCTCTGACTG 61.018 60.000 0.00 0.00 34.57 3.51
30 31 1.294780 CGCCAAAGCCTCTCTGACT 59.705 57.895 0.00 0.00 34.57 3.41
31 32 2.394563 GCGCCAAAGCCTCTCTGAC 61.395 63.158 0.00 0.00 34.57 3.51
32 33 2.046892 GCGCCAAAGCCTCTCTGA 60.047 61.111 0.00 0.00 34.57 3.27
33 34 1.673665 AAGCGCCAAAGCCTCTCTG 60.674 57.895 2.29 0.00 38.01 3.35
34 35 1.673665 CAAGCGCCAAAGCCTCTCT 60.674 57.895 2.29 0.00 38.01 3.10
35 36 2.873288 CAAGCGCCAAAGCCTCTC 59.127 61.111 2.29 0.00 38.01 3.20
36 37 3.368571 GCAAGCGCCAAAGCCTCT 61.369 61.111 2.29 0.00 38.01 3.69
46 47 0.937304 TTAAGATCATCGGCAAGCGC 59.063 50.000 0.00 0.00 37.44 5.92
47 48 3.990469 ACTATTAAGATCATCGGCAAGCG 59.010 43.478 0.00 0.00 0.00 4.68
48 49 4.090642 CGACTATTAAGATCATCGGCAAGC 59.909 45.833 0.00 0.00 0.00 4.01
49 50 4.090642 GCGACTATTAAGATCATCGGCAAG 59.909 45.833 0.00 0.00 0.00 4.01
50 51 3.987868 GCGACTATTAAGATCATCGGCAA 59.012 43.478 0.00 0.00 0.00 4.52
51 52 3.005367 TGCGACTATTAAGATCATCGGCA 59.995 43.478 0.00 0.00 0.00 5.69
52 53 3.575630 TGCGACTATTAAGATCATCGGC 58.424 45.455 0.00 0.00 0.00 5.54
53 54 5.048153 TCTGCGACTATTAAGATCATCGG 57.952 43.478 0.00 0.00 0.00 4.18
54 55 7.750903 TGTATTCTGCGACTATTAAGATCATCG 59.249 37.037 0.00 0.00 0.00 3.84
55 56 8.972262 TGTATTCTGCGACTATTAAGATCATC 57.028 34.615 0.00 0.00 0.00 2.92
56 57 9.363763 CATGTATTCTGCGACTATTAAGATCAT 57.636 33.333 0.00 0.00 0.00 2.45
57 58 8.360390 ACATGTATTCTGCGACTATTAAGATCA 58.640 33.333 0.00 0.00 0.00 2.92
58 59 8.749841 ACATGTATTCTGCGACTATTAAGATC 57.250 34.615 0.00 0.00 0.00 2.75
59 60 7.539022 CGACATGTATTCTGCGACTATTAAGAT 59.461 37.037 0.00 0.00 0.00 2.40
60 61 6.856426 CGACATGTATTCTGCGACTATTAAGA 59.144 38.462 0.00 0.00 0.00 2.10
61 62 6.399039 GCGACATGTATTCTGCGACTATTAAG 60.399 42.308 0.00 0.00 0.00 1.85
62 63 5.401376 GCGACATGTATTCTGCGACTATTAA 59.599 40.000 0.00 0.00 0.00 1.40
63 64 4.915667 GCGACATGTATTCTGCGACTATTA 59.084 41.667 0.00 0.00 0.00 0.98
64 65 3.736252 GCGACATGTATTCTGCGACTATT 59.264 43.478 0.00 0.00 0.00 1.73
65 66 3.004839 AGCGACATGTATTCTGCGACTAT 59.995 43.478 0.00 0.00 0.00 2.12
66 67 2.357952 AGCGACATGTATTCTGCGACTA 59.642 45.455 0.00 0.00 0.00 2.59
67 68 1.135139 AGCGACATGTATTCTGCGACT 59.865 47.619 0.00 0.00 0.00 4.18
68 69 1.560923 AGCGACATGTATTCTGCGAC 58.439 50.000 0.00 0.00 0.00 5.19
69 70 2.357952 AGTAGCGACATGTATTCTGCGA 59.642 45.455 0.00 0.00 0.00 5.10
70 71 2.469147 CAGTAGCGACATGTATTCTGCG 59.531 50.000 0.00 0.00 0.00 5.18
71 72 3.487574 GTCAGTAGCGACATGTATTCTGC 59.512 47.826 0.00 0.00 35.88 4.26
72 73 4.737279 CAGTCAGTAGCGACATGTATTCTG 59.263 45.833 0.00 4.18 38.43 3.02
73 74 4.734989 GCAGTCAGTAGCGACATGTATTCT 60.735 45.833 0.00 0.00 38.43 2.40
74 75 3.487574 GCAGTCAGTAGCGACATGTATTC 59.512 47.826 0.00 0.00 38.43 1.75
75 76 3.119137 TGCAGTCAGTAGCGACATGTATT 60.119 43.478 0.00 0.00 38.43 1.89
76 77 2.427095 TGCAGTCAGTAGCGACATGTAT 59.573 45.455 0.00 0.00 38.43 2.29
77 78 1.816224 TGCAGTCAGTAGCGACATGTA 59.184 47.619 0.00 0.00 38.43 2.29
78 79 0.603065 TGCAGTCAGTAGCGACATGT 59.397 50.000 0.00 0.00 38.43 3.21
79 80 1.713597 TTGCAGTCAGTAGCGACATG 58.286 50.000 0.00 0.00 38.43 3.21
80 81 2.289072 ACTTTGCAGTCAGTAGCGACAT 60.289 45.455 0.00 0.00 38.43 3.06
81 82 1.068588 ACTTTGCAGTCAGTAGCGACA 59.931 47.619 0.00 0.00 38.43 4.35
82 83 1.784525 ACTTTGCAGTCAGTAGCGAC 58.215 50.000 0.00 0.00 36.08 5.19
83 84 2.135139 CAACTTTGCAGTCAGTAGCGA 58.865 47.619 0.00 0.00 30.45 4.93
84 85 1.867233 ACAACTTTGCAGTCAGTAGCG 59.133 47.619 0.00 0.00 30.45 4.26
85 86 4.058817 AGTACAACTTTGCAGTCAGTAGC 58.941 43.478 0.00 0.00 30.45 3.58
86 87 4.449068 CCAGTACAACTTTGCAGTCAGTAG 59.551 45.833 0.00 0.00 30.45 2.57
87 88 4.100344 TCCAGTACAACTTTGCAGTCAGTA 59.900 41.667 0.00 0.00 30.45 2.74
88 89 3.118408 TCCAGTACAACTTTGCAGTCAGT 60.118 43.478 0.00 0.00 30.45 3.41
89 90 3.248602 GTCCAGTACAACTTTGCAGTCAG 59.751 47.826 0.00 0.00 30.45 3.51
90 91 3.202906 GTCCAGTACAACTTTGCAGTCA 58.797 45.455 0.00 0.00 30.45 3.41
91 92 2.221055 CGTCCAGTACAACTTTGCAGTC 59.779 50.000 0.00 0.00 30.45 3.51
92 93 2.159014 TCGTCCAGTACAACTTTGCAGT 60.159 45.455 0.00 0.00 33.11 4.40
93 94 2.221055 GTCGTCCAGTACAACTTTGCAG 59.779 50.000 0.00 0.00 0.00 4.41
94 95 2.206750 GTCGTCCAGTACAACTTTGCA 58.793 47.619 0.00 0.00 0.00 4.08
95 96 2.206750 TGTCGTCCAGTACAACTTTGC 58.793 47.619 0.00 0.00 0.00 3.68
96 97 4.055360 TGATGTCGTCCAGTACAACTTTG 58.945 43.478 0.00 0.00 0.00 2.77
97 98 4.330944 TGATGTCGTCCAGTACAACTTT 57.669 40.909 0.00 0.00 0.00 2.66
98 99 4.038763 TCTTGATGTCGTCCAGTACAACTT 59.961 41.667 0.00 0.00 0.00 2.66
99 100 3.572682 TCTTGATGTCGTCCAGTACAACT 59.427 43.478 0.00 0.00 0.00 3.16
100 101 3.909430 TCTTGATGTCGTCCAGTACAAC 58.091 45.455 0.00 0.00 0.00 3.32
101 102 4.202172 TGTTCTTGATGTCGTCCAGTACAA 60.202 41.667 3.88 0.00 30.42 2.41
102 103 3.319689 TGTTCTTGATGTCGTCCAGTACA 59.680 43.478 0.00 2.58 30.73 2.90
103 104 3.909430 TGTTCTTGATGTCGTCCAGTAC 58.091 45.455 0.00 0.00 0.00 2.73
104 105 4.594123 TTGTTCTTGATGTCGTCCAGTA 57.406 40.909 0.00 0.00 0.00 2.74
105 106 3.469008 TTGTTCTTGATGTCGTCCAGT 57.531 42.857 0.00 0.00 0.00 4.00
106 107 4.035091 TGTTTTGTTCTTGATGTCGTCCAG 59.965 41.667 0.00 0.00 0.00 3.86
107 108 3.942115 TGTTTTGTTCTTGATGTCGTCCA 59.058 39.130 0.00 0.00 0.00 4.02
108 109 4.279659 GTGTTTTGTTCTTGATGTCGTCC 58.720 43.478 0.00 0.00 0.00 4.79
109 110 4.201871 TGGTGTTTTGTTCTTGATGTCGTC 60.202 41.667 0.00 0.00 0.00 4.20
110 111 3.692101 TGGTGTTTTGTTCTTGATGTCGT 59.308 39.130 0.00 0.00 0.00 4.34
111 112 4.282068 CTGGTGTTTTGTTCTTGATGTCG 58.718 43.478 0.00 0.00 0.00 4.35
112 113 4.044426 GCTGGTGTTTTGTTCTTGATGTC 58.956 43.478 0.00 0.00 0.00 3.06
113 114 3.701040 AGCTGGTGTTTTGTTCTTGATGT 59.299 39.130 0.00 0.00 0.00 3.06
114 115 4.311816 AGCTGGTGTTTTGTTCTTGATG 57.688 40.909 0.00 0.00 0.00 3.07
115 116 6.006449 AGATAGCTGGTGTTTTGTTCTTGAT 58.994 36.000 0.00 0.00 0.00 2.57
116 117 5.376625 AGATAGCTGGTGTTTTGTTCTTGA 58.623 37.500 0.00 0.00 0.00 3.02
117 118 5.695851 AGATAGCTGGTGTTTTGTTCTTG 57.304 39.130 0.00 0.00 0.00 3.02
118 119 6.375455 CCATAGATAGCTGGTGTTTTGTTCTT 59.625 38.462 0.00 0.00 0.00 2.52
119 120 5.882557 CCATAGATAGCTGGTGTTTTGTTCT 59.117 40.000 0.00 0.00 0.00 3.01
120 121 5.880332 TCCATAGATAGCTGGTGTTTTGTTC 59.120 40.000 0.00 0.00 34.03 3.18
121 122 5.815581 TCCATAGATAGCTGGTGTTTTGTT 58.184 37.500 0.00 0.00 34.03 2.83
122 123 5.431765 CTCCATAGATAGCTGGTGTTTTGT 58.568 41.667 0.00 0.00 34.03 2.83
123 124 4.274459 GCTCCATAGATAGCTGGTGTTTTG 59.726 45.833 0.00 0.00 35.80 2.44
124 125 4.455606 GCTCCATAGATAGCTGGTGTTTT 58.544 43.478 0.00 0.00 35.80 2.43
125 126 4.078639 GCTCCATAGATAGCTGGTGTTT 57.921 45.455 0.00 0.00 35.80 2.83
126 127 3.760580 GCTCCATAGATAGCTGGTGTT 57.239 47.619 0.00 0.00 35.80 3.32
133 134 5.336150 TGCAGAATAGCTCCATAGATAGC 57.664 43.478 0.00 0.00 39.08 2.97
134 135 7.110043 TCATGCAGAATAGCTCCATAGATAG 57.890 40.000 0.00 0.00 34.99 2.08
135 136 7.486407 TTCATGCAGAATAGCTCCATAGATA 57.514 36.000 0.00 0.00 34.99 1.98
136 137 6.370186 TTCATGCAGAATAGCTCCATAGAT 57.630 37.500 0.00 0.00 34.99 1.98
137 138 5.813513 TTCATGCAGAATAGCTCCATAGA 57.186 39.130 0.00 0.00 34.99 1.98
138 139 6.653740 TGATTTCATGCAGAATAGCTCCATAG 59.346 38.462 0.00 0.00 35.83 2.23
139 140 6.536447 TGATTTCATGCAGAATAGCTCCATA 58.464 36.000 0.00 0.00 35.83 2.74
140 141 5.382616 TGATTTCATGCAGAATAGCTCCAT 58.617 37.500 0.00 0.00 35.83 3.41
141 142 4.784177 TGATTTCATGCAGAATAGCTCCA 58.216 39.130 0.00 0.00 35.83 3.86
142 143 5.961396 ATGATTTCATGCAGAATAGCTCC 57.039 39.130 0.00 0.00 35.83 4.70
143 144 7.148440 GGTCTATGATTTCATGCAGAATAGCTC 60.148 40.741 3.30 0.00 37.15 4.09
144 145 6.654161 GGTCTATGATTTCATGCAGAATAGCT 59.346 38.462 3.30 0.00 37.15 3.32
145 146 6.429078 TGGTCTATGATTTCATGCAGAATAGC 59.571 38.462 3.30 0.00 37.15 2.97
146 147 7.974482 TGGTCTATGATTTCATGCAGAATAG 57.026 36.000 3.30 0.00 37.15 1.73
147 148 9.662947 CTATGGTCTATGATTTCATGCAGAATA 57.337 33.333 3.30 0.00 37.15 1.75
148 149 8.162085 ACTATGGTCTATGATTTCATGCAGAAT 58.838 33.333 3.30 0.00 37.15 2.40
149 150 7.512130 ACTATGGTCTATGATTTCATGCAGAA 58.488 34.615 3.30 0.00 37.15 3.02
150 151 7.071069 ACTATGGTCTATGATTTCATGCAGA 57.929 36.000 3.30 0.00 37.15 4.26
151 152 7.094890 GGAACTATGGTCTATGATTTCATGCAG 60.095 40.741 3.30 0.00 37.15 4.41
152 153 6.712095 GGAACTATGGTCTATGATTTCATGCA 59.288 38.462 3.30 0.00 37.15 3.96
153 154 6.712095 TGGAACTATGGTCTATGATTTCATGC 59.288 38.462 3.30 0.00 37.15 4.06
154 155 8.092521 GTGGAACTATGGTCTATGATTTCATG 57.907 38.462 3.30 0.00 37.15 3.07
173 174 9.191995 CAAAGGTACATGAAATAAAAGTGGAAC 57.808 33.333 0.00 0.00 0.00 3.62
174 175 8.919145 ACAAAGGTACATGAAATAAAAGTGGAA 58.081 29.630 0.00 0.00 0.00 3.53
175 176 8.356657 CACAAAGGTACATGAAATAAAAGTGGA 58.643 33.333 0.00 0.00 0.00 4.02
176 177 7.116233 GCACAAAGGTACATGAAATAAAAGTGG 59.884 37.037 0.00 0.00 0.00 4.00
177 178 7.651304 TGCACAAAGGTACATGAAATAAAAGTG 59.349 33.333 0.00 0.59 0.00 3.16
178 179 7.721402 TGCACAAAGGTACATGAAATAAAAGT 58.279 30.769 0.00 0.00 0.00 2.66
179 180 8.761575 ATGCACAAAGGTACATGAAATAAAAG 57.238 30.769 0.00 0.00 29.76 2.27
188 189 4.771590 AACTCATGCACAAAGGTACATG 57.228 40.909 0.00 2.38 45.99 3.21
189 190 5.415701 CCTAAACTCATGCACAAAGGTACAT 59.584 40.000 0.00 0.00 31.00 2.29
190 191 4.759693 CCTAAACTCATGCACAAAGGTACA 59.240 41.667 0.00 0.00 0.00 2.90
191 192 5.001232 TCCTAAACTCATGCACAAAGGTAC 58.999 41.667 0.00 0.00 0.00 3.34
192 193 5.235850 TCCTAAACTCATGCACAAAGGTA 57.764 39.130 0.00 0.00 0.00 3.08
193 194 4.074970 CTCCTAAACTCATGCACAAAGGT 58.925 43.478 0.00 0.00 0.00 3.50
194 195 3.119708 GCTCCTAAACTCATGCACAAAGG 60.120 47.826 0.00 0.00 0.00 3.11
195 196 3.755378 AGCTCCTAAACTCATGCACAAAG 59.245 43.478 0.00 0.00 0.00 2.77
196 197 3.753272 GAGCTCCTAAACTCATGCACAAA 59.247 43.478 0.87 0.00 32.98 2.83
197 198 3.338249 GAGCTCCTAAACTCATGCACAA 58.662 45.455 0.87 0.00 32.98 3.33
198 199 2.355108 GGAGCTCCTAAACTCATGCACA 60.355 50.000 26.25 0.00 34.48 4.57
199 200 2.284190 GGAGCTCCTAAACTCATGCAC 58.716 52.381 26.25 0.00 34.48 4.57
200 201 1.908619 TGGAGCTCCTAAACTCATGCA 59.091 47.619 32.28 5.57 36.82 3.96
201 202 2.698855 TGGAGCTCCTAAACTCATGC 57.301 50.000 32.28 2.75 36.82 4.06
202 203 5.220739 CGAAATTGGAGCTCCTAAACTCATG 60.221 44.000 32.28 10.96 36.82 3.07
203 204 4.878397 CGAAATTGGAGCTCCTAAACTCAT 59.122 41.667 32.28 7.12 36.82 2.90
204 205 4.020573 TCGAAATTGGAGCTCCTAAACTCA 60.021 41.667 32.28 8.55 36.82 3.41
205 206 4.504858 TCGAAATTGGAGCTCCTAAACTC 58.495 43.478 32.28 19.99 36.82 3.01
206 207 4.508662 CTCGAAATTGGAGCTCCTAAACT 58.491 43.478 32.28 14.12 36.82 2.66
207 208 3.623510 CCTCGAAATTGGAGCTCCTAAAC 59.376 47.826 32.28 18.26 36.82 2.01
208 209 3.873910 CCTCGAAATTGGAGCTCCTAAA 58.126 45.455 32.28 20.20 36.82 1.85
209 210 2.420129 GCCTCGAAATTGGAGCTCCTAA 60.420 50.000 32.28 23.62 36.82 2.69
210 211 1.139058 GCCTCGAAATTGGAGCTCCTA 59.861 52.381 32.28 26.13 36.82 2.94
211 212 0.107459 GCCTCGAAATTGGAGCTCCT 60.107 55.000 32.28 13.46 36.82 3.69
212 213 0.107459 AGCCTCGAAATTGGAGCTCC 60.107 55.000 26.78 26.78 0.00 4.70
213 214 1.294857 GAGCCTCGAAATTGGAGCTC 58.705 55.000 4.71 4.71 32.09 4.09
214 215 0.615331 TGAGCCTCGAAATTGGAGCT 59.385 50.000 0.00 1.25 0.00 4.09
215 216 0.729690 GTGAGCCTCGAAATTGGAGC 59.270 55.000 0.00 0.00 0.00 4.70
216 217 2.099141 TGTGAGCCTCGAAATTGGAG 57.901 50.000 0.00 0.00 0.00 3.86
217 218 2.559698 TTGTGAGCCTCGAAATTGGA 57.440 45.000 0.00 0.00 0.00 3.53
218 219 3.012518 AGATTGTGAGCCTCGAAATTGG 58.987 45.455 0.00 0.00 0.00 3.16
219 220 4.260538 GCTAGATTGTGAGCCTCGAAATTG 60.261 45.833 0.00 0.00 32.25 2.32
220 221 3.873952 GCTAGATTGTGAGCCTCGAAATT 59.126 43.478 0.00 0.00 32.25 1.82
221 222 3.462021 GCTAGATTGTGAGCCTCGAAAT 58.538 45.455 0.00 0.00 32.25 2.17
222 223 2.735444 CGCTAGATTGTGAGCCTCGAAA 60.735 50.000 0.00 0.00 35.13 3.46
223 224 1.202302 CGCTAGATTGTGAGCCTCGAA 60.202 52.381 0.00 0.00 35.13 3.71
224 225 0.382158 CGCTAGATTGTGAGCCTCGA 59.618 55.000 0.00 0.00 35.13 4.04
225 226 0.382158 TCGCTAGATTGTGAGCCTCG 59.618 55.000 0.00 0.00 35.13 4.63
226 227 2.468831 CTTCGCTAGATTGTGAGCCTC 58.531 52.381 0.00 0.00 35.13 4.70
227 228 1.472376 GCTTCGCTAGATTGTGAGCCT 60.472 52.381 0.00 0.00 35.13 4.58
228 229 0.933796 GCTTCGCTAGATTGTGAGCC 59.066 55.000 0.00 0.00 35.13 4.70
229 230 1.645034 TGCTTCGCTAGATTGTGAGC 58.355 50.000 0.00 0.00 35.24 4.26
230 231 4.615949 ACTATGCTTCGCTAGATTGTGAG 58.384 43.478 0.00 0.00 0.00 3.51
231 232 4.655762 ACTATGCTTCGCTAGATTGTGA 57.344 40.909 0.00 0.00 0.00 3.58
232 233 5.291858 TCAAACTATGCTTCGCTAGATTGTG 59.708 40.000 0.00 0.00 32.59 3.33
233 234 5.419542 TCAAACTATGCTTCGCTAGATTGT 58.580 37.500 0.00 0.00 32.59 2.71
234 235 5.973651 TCAAACTATGCTTCGCTAGATTG 57.026 39.130 0.00 0.00 32.22 2.67
235 236 7.559590 AATTCAAACTATGCTTCGCTAGATT 57.440 32.000 0.00 0.00 0.00 2.40
236 237 7.412853 CAAATTCAAACTATGCTTCGCTAGAT 58.587 34.615 0.00 0.00 0.00 1.98
237 238 6.183360 CCAAATTCAAACTATGCTTCGCTAGA 60.183 38.462 0.00 0.00 0.00 2.43
238 239 5.967674 CCAAATTCAAACTATGCTTCGCTAG 59.032 40.000 0.00 0.00 0.00 3.42
239 240 5.163663 CCCAAATTCAAACTATGCTTCGCTA 60.164 40.000 0.00 0.00 0.00 4.26
240 241 4.380867 CCCAAATTCAAACTATGCTTCGCT 60.381 41.667 0.00 0.00 0.00 4.93
241 242 3.859386 CCCAAATTCAAACTATGCTTCGC 59.141 43.478 0.00 0.00 0.00 4.70
242 243 4.423732 CCCCAAATTCAAACTATGCTTCG 58.576 43.478 0.00 0.00 0.00 3.79
243 244 4.222810 ACCCCCAAATTCAAACTATGCTTC 59.777 41.667 0.00 0.00 0.00 3.86
244 245 4.167319 ACCCCCAAATTCAAACTATGCTT 58.833 39.130 0.00 0.00 0.00 3.91
245 246 3.790126 ACCCCCAAATTCAAACTATGCT 58.210 40.909 0.00 0.00 0.00 3.79
246 247 4.252878 CAACCCCCAAATTCAAACTATGC 58.747 43.478 0.00 0.00 0.00 3.14
247 248 4.831107 CCAACCCCCAAATTCAAACTATG 58.169 43.478 0.00 0.00 0.00 2.23
248 249 3.263170 GCCAACCCCCAAATTCAAACTAT 59.737 43.478 0.00 0.00 0.00 2.12
249 250 2.635427 GCCAACCCCCAAATTCAAACTA 59.365 45.455 0.00 0.00 0.00 2.24
250 251 1.419762 GCCAACCCCCAAATTCAAACT 59.580 47.619 0.00 0.00 0.00 2.66
251 252 1.544537 GGCCAACCCCCAAATTCAAAC 60.545 52.381 0.00 0.00 0.00 2.93
252 253 0.767998 GGCCAACCCCCAAATTCAAA 59.232 50.000 0.00 0.00 0.00 2.69
253 254 1.476007 CGGCCAACCCCCAAATTCAA 61.476 55.000 2.24 0.00 0.00 2.69
254 255 1.910772 CGGCCAACCCCCAAATTCA 60.911 57.895 2.24 0.00 0.00 2.57
255 256 2.978000 CGGCCAACCCCCAAATTC 59.022 61.111 2.24 0.00 0.00 2.17
256 257 3.318384 GCGGCCAACCCCCAAATT 61.318 61.111 2.24 0.00 0.00 1.82
264 265 4.054825 CACACATGGCGGCCAACC 62.055 66.667 27.70 3.71 36.95 3.77
265 266 4.054825 CCACACATGGCGGCCAAC 62.055 66.667 27.70 0.00 39.82 3.77
274 275 2.424601 CAGGATTGCCTAACCACACATG 59.575 50.000 0.00 0.00 44.80 3.21
275 276 2.621407 CCAGGATTGCCTAACCACACAT 60.621 50.000 0.00 0.00 44.80 3.21
276 277 1.271871 CCAGGATTGCCTAACCACACA 60.272 52.381 0.00 0.00 44.80 3.72
277 278 1.271926 ACCAGGATTGCCTAACCACAC 60.272 52.381 0.00 0.00 44.80 3.82
278 279 1.072266 ACCAGGATTGCCTAACCACA 58.928 50.000 0.00 0.00 44.80 4.17
279 280 3.359695 TTACCAGGATTGCCTAACCAC 57.640 47.619 0.00 0.00 44.80 4.16
280 281 3.785887 AGATTACCAGGATTGCCTAACCA 59.214 43.478 0.00 0.00 44.80 3.67
281 282 4.439253 AGATTACCAGGATTGCCTAACC 57.561 45.455 0.00 0.00 44.80 2.85
282 283 6.122964 AGAAAGATTACCAGGATTGCCTAAC 58.877 40.000 0.00 0.00 44.80 2.34
283 284 6.327386 AGAAAGATTACCAGGATTGCCTAA 57.673 37.500 0.00 0.00 44.80 2.69
284 285 5.975988 AGAAAGATTACCAGGATTGCCTA 57.024 39.130 0.00 0.00 44.80 3.93
286 287 5.921962 AAAGAAAGATTACCAGGATTGCC 57.078 39.130 0.00 0.00 0.00 4.52
287 288 6.691508 ACAAAAGAAAGATTACCAGGATTGC 58.308 36.000 0.00 0.00 0.00 3.56
288 289 8.244113 GGTACAAAAGAAAGATTACCAGGATTG 58.756 37.037 0.00 0.00 31.10 2.67
289 290 8.170730 AGGTACAAAAGAAAGATTACCAGGATT 58.829 33.333 0.00 0.00 32.85 3.01
290 291 7.699878 AGGTACAAAAGAAAGATTACCAGGAT 58.300 34.615 0.00 0.00 32.85 3.24
291 292 7.086685 AGGTACAAAAGAAAGATTACCAGGA 57.913 36.000 0.00 0.00 32.85 3.86
292 293 7.761038 AAGGTACAAAAGAAAGATTACCAGG 57.239 36.000 0.00 0.00 32.85 4.45
293 294 8.846211 TCAAAGGTACAAAAGAAAGATTACCAG 58.154 33.333 0.00 0.00 32.85 4.00
294 295 8.754991 TCAAAGGTACAAAAGAAAGATTACCA 57.245 30.769 0.00 0.00 32.85 3.25
295 296 9.459640 GTTCAAAGGTACAAAAGAAAGATTACC 57.540 33.333 0.00 0.00 0.00 2.85
299 300 9.533253 CAATGTTCAAAGGTACAAAAGAAAGAT 57.467 29.630 0.00 0.00 0.00 2.40
300 301 7.978975 CCAATGTTCAAAGGTACAAAAGAAAGA 59.021 33.333 0.00 0.00 0.00 2.52
301 302 7.254421 GCCAATGTTCAAAGGTACAAAAGAAAG 60.254 37.037 0.00 0.00 0.00 2.62
302 303 6.536941 GCCAATGTTCAAAGGTACAAAAGAAA 59.463 34.615 0.00 0.00 0.00 2.52
303 304 6.045955 GCCAATGTTCAAAGGTACAAAAGAA 58.954 36.000 0.00 0.00 0.00 2.52
304 305 5.127845 TGCCAATGTTCAAAGGTACAAAAGA 59.872 36.000 0.00 0.00 0.00 2.52
305 306 5.234116 GTGCCAATGTTCAAAGGTACAAAAG 59.766 40.000 0.00 0.00 36.84 2.27
306 307 5.112686 GTGCCAATGTTCAAAGGTACAAAA 58.887 37.500 0.00 0.00 36.84 2.44
307 308 4.160439 TGTGCCAATGTTCAAAGGTACAAA 59.840 37.500 12.39 0.00 42.45 2.83
308 309 3.701542 TGTGCCAATGTTCAAAGGTACAA 59.298 39.130 12.39 1.89 42.45 2.41
309 310 3.291584 TGTGCCAATGTTCAAAGGTACA 58.708 40.909 11.34 11.34 43.03 2.90
310 311 4.202111 ACTTGTGCCAATGTTCAAAGGTAC 60.202 41.667 0.00 0.00 37.28 3.34
311 312 3.957497 ACTTGTGCCAATGTTCAAAGGTA 59.043 39.130 0.00 0.00 0.00 3.08
312 313 2.765699 ACTTGTGCCAATGTTCAAAGGT 59.234 40.909 0.00 0.00 0.00 3.50
313 314 3.457610 ACTTGTGCCAATGTTCAAAGG 57.542 42.857 0.00 0.00 0.00 3.11
314 315 6.900568 TTTAACTTGTGCCAATGTTCAAAG 57.099 33.333 0.00 0.00 0.00 2.77
315 316 8.948631 TTATTTAACTTGTGCCAATGTTCAAA 57.051 26.923 0.00 0.00 0.00 2.69
316 317 8.948631 TTTATTTAACTTGTGCCAATGTTCAA 57.051 26.923 0.00 0.00 0.00 2.69
317 318 7.170658 GCTTTATTTAACTTGTGCCAATGTTCA 59.829 33.333 0.00 0.00 0.00 3.18
318 319 7.384932 AGCTTTATTTAACTTGTGCCAATGTTC 59.615 33.333 0.00 0.00 0.00 3.18
319 320 7.216494 AGCTTTATTTAACTTGTGCCAATGTT 58.784 30.769 0.00 0.00 0.00 2.71
320 321 6.758254 AGCTTTATTTAACTTGTGCCAATGT 58.242 32.000 0.00 0.00 0.00 2.71
321 322 7.410728 CGAAGCTTTATTTAACTTGTGCCAATG 60.411 37.037 0.00 0.00 0.00 2.82
322 323 6.586082 CGAAGCTTTATTTAACTTGTGCCAAT 59.414 34.615 0.00 0.00 0.00 3.16
323 324 5.918011 CGAAGCTTTATTTAACTTGTGCCAA 59.082 36.000 0.00 0.00 0.00 4.52
324 325 5.457140 CGAAGCTTTATTTAACTTGTGCCA 58.543 37.500 0.00 0.00 0.00 4.92
325 326 5.992489 CGAAGCTTTATTTAACTTGTGCC 57.008 39.130 0.00 0.00 0.00 5.01
334 335 8.736499 TGAGACAATCACGCGAAGCTTTATTTA 61.736 37.037 15.93 0.00 42.85 1.40
335 336 7.993166 TGAGACAATCACGCGAAGCTTTATTT 61.993 38.462 15.93 0.00 42.85 1.40
336 337 6.588452 TGAGACAATCACGCGAAGCTTTATT 61.588 40.000 15.93 0.00 42.85 1.40
337 338 5.150809 TGAGACAATCACGCGAAGCTTTAT 61.151 41.667 15.93 0.00 42.85 1.40
338 339 3.859252 TGAGACAATCACGCGAAGCTTTA 60.859 43.478 15.93 0.00 42.85 1.85
339 340 3.122687 TGAGACAATCACGCGAAGCTTT 61.123 45.455 15.93 0.00 42.85 3.51
340 341 1.605457 TGAGACAATCACGCGAAGCTT 60.605 47.619 15.93 0.00 42.85 3.74
341 342 0.038251 TGAGACAATCACGCGAAGCT 60.038 50.000 15.93 0.00 42.85 3.74
342 343 0.790207 TTGAGACAATCACGCGAAGC 59.210 50.000 15.93 0.00 43.09 3.86
343 344 3.519908 TTTTGAGACAATCACGCGAAG 57.480 42.857 15.93 4.76 37.77 3.79
344 345 3.953874 TTTTTGAGACAATCACGCGAA 57.046 38.095 15.93 0.00 37.77 4.70
367 368 1.065126 CGGAGAGGGGCAGAGATTTTT 60.065 52.381 0.00 0.00 0.00 1.94
368 369 0.543749 CGGAGAGGGGCAGAGATTTT 59.456 55.000 0.00 0.00 0.00 1.82
369 370 1.341156 CCGGAGAGGGGCAGAGATTT 61.341 60.000 0.00 0.00 35.97 2.17
370 371 1.764054 CCGGAGAGGGGCAGAGATT 60.764 63.158 0.00 0.00 35.97 2.40
371 372 2.123077 CCGGAGAGGGGCAGAGAT 60.123 66.667 0.00 0.00 35.97 2.75
372 373 3.673597 ACCGGAGAGGGGCAGAGA 61.674 66.667 9.46 0.00 46.96 3.10
373 374 3.465403 CACCGGAGAGGGGCAGAG 61.465 72.222 9.46 0.00 46.96 3.35
425 426 3.522731 CTCCTCGGAGGCGACAGG 61.523 72.222 19.48 0.00 38.51 4.00
558 599 7.712639 AGTTACTACATGCAACTGGAGATAATG 59.287 37.037 6.54 0.00 31.48 1.90
581 622 5.104735 GGATCAATTCAGTAGAGGACCAGTT 60.105 44.000 0.00 0.00 0.00 3.16
605 646 7.599998 AGGCTGCTTTGTGTTAATTTATTTCTG 59.400 33.333 0.00 0.00 0.00 3.02
634 675 8.925161 TGTTTTCTGTTTTGGTTGAGAAATAG 57.075 30.769 0.00 0.00 35.06 1.73
786 838 4.868734 GCCACTCAAGTTATACTGGTGTAC 59.131 45.833 0.00 0.00 25.95 2.90
851 905 1.334869 GGTCAACACAAACAGCCTCAG 59.665 52.381 0.00 0.00 0.00 3.35
874 928 6.600882 ACTAATTTTGGAACGGAGAGAGTA 57.399 37.500 0.00 0.00 0.00 2.59
875 929 5.485209 ACTAATTTTGGAACGGAGAGAGT 57.515 39.130 0.00 0.00 0.00 3.24
876 930 6.395629 TGTACTAATTTTGGAACGGAGAGAG 58.604 40.000 0.00 0.00 0.00 3.20
877 931 6.349243 TGTACTAATTTTGGAACGGAGAGA 57.651 37.500 0.00 0.00 0.00 3.10
878 932 7.172703 ACTTTGTACTAATTTTGGAACGGAGAG 59.827 37.037 0.00 0.00 0.00 3.20
879 933 6.993902 ACTTTGTACTAATTTTGGAACGGAGA 59.006 34.615 0.00 0.00 0.00 3.71
880 934 7.198306 ACTTTGTACTAATTTTGGAACGGAG 57.802 36.000 0.00 0.00 0.00 4.63
881 935 7.571080 AACTTTGTACTAATTTTGGAACGGA 57.429 32.000 0.00 0.00 0.00 4.69
882 936 8.562052 ACTAACTTTGTACTAATTTTGGAACGG 58.438 33.333 0.00 0.00 0.00 4.44
895 949 9.716531 GACCCAACTTTATACTAACTTTGTACT 57.283 33.333 0.00 0.00 0.00 2.73
896 950 9.492973 TGACCCAACTTTATACTAACTTTGTAC 57.507 33.333 0.00 0.00 0.00 2.90
898 952 9.227777 GATGACCCAACTTTATACTAACTTTGT 57.772 33.333 0.00 0.00 0.00 2.83
899 953 9.449719 AGATGACCCAACTTTATACTAACTTTG 57.550 33.333 0.00 0.00 0.00 2.77
910 964 8.293867 CGTTTCAAAATAGATGACCCAACTTTA 58.706 33.333 0.00 0.00 0.00 1.85
911 965 7.145323 CGTTTCAAAATAGATGACCCAACTTT 58.855 34.615 0.00 0.00 0.00 2.66
912 966 6.294508 CCGTTTCAAAATAGATGACCCAACTT 60.295 38.462 0.00 0.00 0.00 2.66
913 967 5.183140 CCGTTTCAAAATAGATGACCCAACT 59.817 40.000 0.00 0.00 0.00 3.16
914 968 5.182380 TCCGTTTCAAAATAGATGACCCAAC 59.818 40.000 0.00 0.00 0.00 3.77
915 969 5.317808 TCCGTTTCAAAATAGATGACCCAA 58.682 37.500 0.00 0.00 0.00 4.12
916 970 4.912586 TCCGTTTCAAAATAGATGACCCA 58.087 39.130 0.00 0.00 0.00 4.51
917 971 4.335594 CCTCCGTTTCAAAATAGATGACCC 59.664 45.833 0.00 0.00 0.00 4.46
918 972 4.335594 CCCTCCGTTTCAAAATAGATGACC 59.664 45.833 0.00 0.00 0.00 4.02
919 973 5.183228 TCCCTCCGTTTCAAAATAGATGAC 58.817 41.667 0.00 0.00 0.00 3.06
920 974 5.045869 ACTCCCTCCGTTTCAAAATAGATGA 60.046 40.000 0.00 0.00 0.00 2.92
921 975 5.186198 ACTCCCTCCGTTTCAAAATAGATG 58.814 41.667 0.00 0.00 0.00 2.90
922 976 5.437191 ACTCCCTCCGTTTCAAAATAGAT 57.563 39.130 0.00 0.00 0.00 1.98
923 977 4.903045 ACTCCCTCCGTTTCAAAATAGA 57.097 40.909 0.00 0.00 0.00 1.98
924 978 5.116882 CCTACTCCCTCCGTTTCAAAATAG 58.883 45.833 0.00 0.00 0.00 1.73
925 979 4.533311 ACCTACTCCCTCCGTTTCAAAATA 59.467 41.667 0.00 0.00 0.00 1.40
926 980 3.329814 ACCTACTCCCTCCGTTTCAAAAT 59.670 43.478 0.00 0.00 0.00 1.82
927 981 2.707257 ACCTACTCCCTCCGTTTCAAAA 59.293 45.455 0.00 0.00 0.00 2.44
928 982 2.038033 CACCTACTCCCTCCGTTTCAAA 59.962 50.000 0.00 0.00 0.00 2.69
929 983 1.621814 CACCTACTCCCTCCGTTTCAA 59.378 52.381 0.00 0.00 0.00 2.69
930 984 1.263356 CACCTACTCCCTCCGTTTCA 58.737 55.000 0.00 0.00 0.00 2.69
931 985 1.067071 CACACCTACTCCCTCCGTTTC 60.067 57.143 0.00 0.00 0.00 2.78
932 986 0.974383 CACACCTACTCCCTCCGTTT 59.026 55.000 0.00 0.00 0.00 3.60
933 987 0.113776 TCACACCTACTCCCTCCGTT 59.886 55.000 0.00 0.00 0.00 4.44
934 988 0.113776 TTCACACCTACTCCCTCCGT 59.886 55.000 0.00 0.00 0.00 4.69
935 989 0.818296 CTTCACACCTACTCCCTCCG 59.182 60.000 0.00 0.00 0.00 4.63
936 990 0.537653 GCTTCACACCTACTCCCTCC 59.462 60.000 0.00 0.00 0.00 4.30
937 991 1.478916 GAGCTTCACACCTACTCCCTC 59.521 57.143 0.00 0.00 0.00 4.30
938 992 1.077993 AGAGCTTCACACCTACTCCCT 59.922 52.381 0.00 0.00 0.00 4.20
939 993 1.205893 CAGAGCTTCACACCTACTCCC 59.794 57.143 0.00 0.00 0.00 4.30
940 994 1.896465 ACAGAGCTTCACACCTACTCC 59.104 52.381 0.00 0.00 0.00 3.85
941 995 3.321497 CAACAGAGCTTCACACCTACTC 58.679 50.000 0.00 0.00 0.00 2.59
942 996 2.548920 GCAACAGAGCTTCACACCTACT 60.549 50.000 0.00 0.00 0.00 2.57
943 997 1.801178 GCAACAGAGCTTCACACCTAC 59.199 52.381 0.00 0.00 0.00 3.18
1003 1057 0.107831 TTGCTAGAAGTGCCACCGTT 59.892 50.000 0.00 0.00 0.00 4.44
1043 1097 2.183811 CGCTGCTCTGTCCCTCTG 59.816 66.667 0.00 0.00 0.00 3.35
1064 1118 1.762370 TGATATTCTGCCTCTTGCCGA 59.238 47.619 0.00 0.00 40.16 5.54
1065 1119 2.141517 CTGATATTCTGCCTCTTGCCG 58.858 52.381 0.00 0.00 40.16 5.69
1066 1120 1.878734 GCTGATATTCTGCCTCTTGCC 59.121 52.381 0.00 0.00 40.16 4.52
1067 1121 2.569059 TGCTGATATTCTGCCTCTTGC 58.431 47.619 4.28 0.00 40.10 4.01
1068 1122 3.502595 CCATGCTGATATTCTGCCTCTTG 59.497 47.826 4.28 0.00 40.10 3.02
1069 1123 3.498121 CCCATGCTGATATTCTGCCTCTT 60.498 47.826 4.28 0.00 40.10 2.85
1081 1135 0.184451 GTGTCCATCCCCATGCTGAT 59.816 55.000 0.00 0.00 0.00 2.90
1126 1180 2.617532 GGTATATAGGAGGTCCGAGCGT 60.618 54.545 0.00 0.00 42.08 5.07
1128 1182 3.018149 CTGGTATATAGGAGGTCCGAGC 58.982 54.545 0.00 0.00 42.08 5.03
1132 1186 5.533333 AGTACCTGGTATATAGGAGGTCC 57.467 47.826 10.23 5.56 39.59 4.46
1218 1305 9.654663 CTTGTTTTTAGCAAGTAGGAGTACTAT 57.345 33.333 0.00 0.00 38.66 2.12
1246 1363 1.195448 CGTTCCATGCTGTCACAAGAC 59.805 52.381 0.00 0.00 45.19 3.01
1280 1399 5.529430 TCTCTACGGAAACAAAATTTCAGCA 59.471 36.000 0.00 0.00 0.00 4.41
1334 1456 6.254589 CAGTGTAGATTAGTGCTAGCAGTTTC 59.745 42.308 29.16 23.66 0.00 2.78
1383 1505 6.832384 CGCCCCTGATTAATATCCTACTACTA 59.168 42.308 0.00 0.00 0.00 1.82
1384 1506 5.657302 CGCCCCTGATTAATATCCTACTACT 59.343 44.000 0.00 0.00 0.00 2.57
1385 1507 5.681695 GCGCCCCTGATTAATATCCTACTAC 60.682 48.000 0.00 0.00 0.00 2.73
1472 1733 3.596214 ACGAAATTTCAGCGACCATAGT 58.404 40.909 17.99 1.14 0.00 2.12
1715 2114 6.604930 ACCACACAAAATTACGCAACTATAC 58.395 36.000 0.00 0.00 0.00 1.47
1716 2115 6.804770 ACCACACAAAATTACGCAACTATA 57.195 33.333 0.00 0.00 0.00 1.31
1814 2226 2.079925 GAATTAGCCGGATCCTCATGC 58.920 52.381 5.05 7.22 0.00 4.06
1823 2235 3.009695 TGGAAAAGGAAGAATTAGCCGGA 59.990 43.478 5.05 0.00 0.00 5.14
1883 2305 4.656117 TGCGCACGAGCTTCGGAA 62.656 61.111 5.66 0.00 45.59 4.30
1942 2364 2.438434 CGTTCCATCCCAGCACCC 60.438 66.667 0.00 0.00 0.00 4.61
1944 2366 1.021390 CAGACGTTCCATCCCAGCAC 61.021 60.000 0.00 0.00 0.00 4.40
1946 2368 0.179000 ATCAGACGTTCCATCCCAGC 59.821 55.000 0.00 0.00 0.00 4.85
1947 2369 1.473965 CCATCAGACGTTCCATCCCAG 60.474 57.143 0.00 0.00 0.00 4.45
1948 2370 0.541392 CCATCAGACGTTCCATCCCA 59.459 55.000 0.00 0.00 0.00 4.37
1963 2385 5.678107 GCAAAGAACCATGACTGATTCCATC 60.678 44.000 0.00 0.00 0.00 3.51
1983 2405 3.773667 TCCATAATTGGCATTGGAGCAAA 59.226 39.130 5.25 0.00 43.29 3.68
2060 2482 4.481112 GCAGAAACATGGGGCGCG 62.481 66.667 0.00 0.00 0.00 6.86
2138 2560 1.301401 TACACGGCCACTTGTGCTC 60.301 57.895 2.24 0.00 39.71 4.26
2263 2685 0.882042 CAGAGATGGCATGCCCGTAC 60.882 60.000 33.44 21.01 35.87 3.67
2362 2784 5.236695 TCGTATCTCGTAAACTGATCTCTGG 59.763 44.000 0.00 0.00 40.80 3.86
2398 2820 2.314549 TCCCTTTGGTAGCCCATCAAAT 59.685 45.455 0.00 0.00 41.49 2.32
2528 2951 1.342082 CCGCGTACTGGTTTCAGACG 61.342 60.000 4.92 7.07 43.49 4.18
2567 3467 3.591254 GAACGGAGGGCGCTCAACT 62.591 63.158 29.41 14.19 0.00 3.16
2571 3471 2.234913 TTTAGGAACGGAGGGCGCTC 62.235 60.000 21.89 21.89 0.00 5.03
2891 3861 8.534333 TGATCATTTAGTACTTCAGACACAAC 57.466 34.615 0.00 0.00 0.00 3.32
2941 3914 7.968405 ACGATTTAAAAGCAGCGAAGAATAAAT 59.032 29.630 0.00 0.00 0.00 1.40
2945 3918 5.088739 CACGATTTAAAAGCAGCGAAGAAT 58.911 37.500 0.00 0.00 0.00 2.40
2948 3921 3.810373 ACACGATTTAAAAGCAGCGAAG 58.190 40.909 0.00 0.00 0.00 3.79
2951 3924 3.181826 TGACACGATTTAAAAGCAGCG 57.818 42.857 0.00 0.00 0.00 5.18
3020 4286 4.331717 CACTTACATGATCAACGTAACCCC 59.668 45.833 14.07 0.00 0.00 4.95
3129 4425 6.919115 TGAACTTAACCTAAAATTTGGTTCGC 59.081 34.615 14.42 4.52 43.48 4.70
3329 4628 8.181573 GCGTCAAATATCCAAATTTCTCAAGTA 58.818 33.333 0.00 0.00 0.00 2.24
3401 4700 3.506398 CTGGGTCTGGGTGGTAATTTTT 58.494 45.455 0.00 0.00 0.00 1.94
3507 4809 5.016831 CCTTATAGGCAGTTTGGTCCTTTT 58.983 41.667 0.00 0.00 0.00 2.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.