Multiple sequence alignment - TraesCS3B01G031300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G031300 chr3B 100.000 3102 0 0 1 3102 14224551 14221450 0.000000e+00 5729.0
1 TraesCS3B01G031300 chr3B 85.474 2492 298 34 1 2473 14066857 14064411 0.000000e+00 2538.0
2 TraesCS3B01G031300 chr3B 84.116 2512 318 44 1 2483 13995229 13992770 0.000000e+00 2353.0
3 TraesCS3B01G031300 chr3B 84.093 2326 286 43 193 2483 28542405 28540129 0.000000e+00 2169.0
4 TraesCS3B01G031300 chr3B 84.130 2218 275 36 300 2483 14106559 14104385 0.000000e+00 2074.0
5 TraesCS3B01G031300 chr3B 83.112 2256 292 44 252 2483 28410337 28408147 0.000000e+00 1973.0
6 TraesCS3B01G031300 chr3B 83.023 2256 294 44 252 2483 28456849 28454659 0.000000e+00 1962.0
7 TraesCS3B01G031300 chr3B 82.979 2256 295 46 252 2483 28423501 28421311 0.000000e+00 1956.0
8 TraesCS3B01G031300 chr3B 82.794 2255 298 45 252 2483 28519510 28517323 0.000000e+00 1932.0
9 TraesCS3B01G031300 chr3B 82.439 2255 306 45 252 2483 28530919 28528732 0.000000e+00 1888.0
10 TraesCS3B01G031300 chr3B 82.043 1537 212 35 828 2342 28469710 28468216 0.000000e+00 1251.0
11 TraesCS3B01G031300 chr3B 80.952 399 45 11 1693 2086 12174267 12173895 1.410000e-73 287.0
12 TraesCS3B01G031300 chr3B 87.374 198 25 0 1 198 27397797 27397994 8.650000e-56 228.0
13 TraesCS3B01G031300 chr3B 91.379 58 5 0 2482 2539 27995483 27995540 2.560000e-11 80.5
14 TraesCS3B01G031300 chr3D 85.714 2520 251 51 1 2483 9949437 9946990 0.000000e+00 2558.0
15 TraesCS3B01G031300 chr3D 85.843 1328 147 28 767 2086 9882154 9880860 0.000000e+00 1373.0
16 TraesCS3B01G031300 chr3D 82.411 1626 176 65 974 2529 5681417 5679832 0.000000e+00 1317.0
17 TraesCS3B01G031300 chr3D 89.641 251 17 2 2228 2469 9880761 9880511 8.350000e-81 311.0
18 TraesCS3B01G031300 chr3D 88.208 212 16 4 2200 2402 5677425 5677214 8.590000e-61 244.0
19 TraesCS3B01G031300 chr2A 82.845 1364 177 27 1148 2483 19663163 19661829 0.000000e+00 1170.0
20 TraesCS3B01G031300 chr3A 81.016 1496 182 47 973 2409 15603638 15605090 0.000000e+00 1096.0
21 TraesCS3B01G031300 chr3A 80.844 877 110 31 1 858 15602626 15603463 1.210000e-178 636.0
22 TraesCS3B01G031300 chrUn 80.163 368 37 23 2018 2362 35209521 35209875 3.090000e-60 243.0
23 TraesCS3B01G031300 chr5B 82.963 135 19 4 2751 2884 711882816 711882947 5.430000e-23 119.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G031300 chr3B 14221450 14224551 3101 True 5729.0 5729 100.0000 1 3102 1 chr3B.!!$R5 3101
1 TraesCS3B01G031300 chr3B 14064411 14066857 2446 True 2538.0 2538 85.4740 1 2473 1 chr3B.!!$R3 2472
2 TraesCS3B01G031300 chr3B 13992770 13995229 2459 True 2353.0 2353 84.1160 1 2483 1 chr3B.!!$R2 2482
3 TraesCS3B01G031300 chr3B 28540129 28542405 2276 True 2169.0 2169 84.0930 193 2483 1 chr3B.!!$R12 2290
4 TraesCS3B01G031300 chr3B 14104385 14106559 2174 True 2074.0 2074 84.1300 300 2483 1 chr3B.!!$R4 2183
5 TraesCS3B01G031300 chr3B 28408147 28410337 2190 True 1973.0 1973 83.1120 252 2483 1 chr3B.!!$R6 2231
6 TraesCS3B01G031300 chr3B 28454659 28456849 2190 True 1962.0 1962 83.0230 252 2483 1 chr3B.!!$R8 2231
7 TraesCS3B01G031300 chr3B 28421311 28423501 2190 True 1956.0 1956 82.9790 252 2483 1 chr3B.!!$R7 2231
8 TraesCS3B01G031300 chr3B 28517323 28519510 2187 True 1932.0 1932 82.7940 252 2483 1 chr3B.!!$R10 2231
9 TraesCS3B01G031300 chr3B 28528732 28530919 2187 True 1888.0 1888 82.4390 252 2483 1 chr3B.!!$R11 2231
10 TraesCS3B01G031300 chr3B 28468216 28469710 1494 True 1251.0 1251 82.0430 828 2342 1 chr3B.!!$R9 1514
11 TraesCS3B01G031300 chr3D 9946990 9949437 2447 True 2558.0 2558 85.7140 1 2483 1 chr3D.!!$R1 2482
12 TraesCS3B01G031300 chr3D 9880511 9882154 1643 True 842.0 1373 87.7420 767 2469 2 chr3D.!!$R3 1702
13 TraesCS3B01G031300 chr3D 5677214 5681417 4203 True 780.5 1317 85.3095 974 2529 2 chr3D.!!$R2 1555
14 TraesCS3B01G031300 chr2A 19661829 19663163 1334 True 1170.0 1170 82.8450 1148 2483 1 chr2A.!!$R1 1335
15 TraesCS3B01G031300 chr3A 15602626 15605090 2464 False 866.0 1096 80.9300 1 2409 2 chr3A.!!$F1 2408

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
200 203 0.393944 ACCTCGAGCTACGGATGTCA 60.394 55.0 6.99 0.00 42.82 3.58 F
892 1019 1.348064 TAGTGTAGTGTGGCTGCCTT 58.652 50.0 21.03 5.58 0.00 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1112 1271 0.030297 ATCTCCTCCTCTGGCCATGT 60.030 55.0 5.51 0.0 0.00 3.21 R
2776 3801 0.108396 TGCTGCTGTTGCTGGTCTAA 59.892 50.0 0.00 0.0 40.48 2.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
117 118 3.492011 GCAACATTGTTCAAGCCTTTCTG 59.508 43.478 0.00 0.00 0.00 3.02
129 130 2.089980 GCCTTTCTGATGCACTGATGT 58.910 47.619 0.00 0.00 0.00 3.06
137 138 2.219458 GATGCACTGATGTGAGGATGG 58.781 52.381 0.00 0.00 46.55 3.51
186 189 2.623889 CCCCTGTGTCTCTATAACCTCG 59.376 54.545 0.00 0.00 0.00 4.63
198 201 2.048444 TAACCTCGAGCTACGGATGT 57.952 50.000 6.99 0.00 42.82 3.06
200 203 0.393944 ACCTCGAGCTACGGATGTCA 60.394 55.000 6.99 0.00 42.82 3.58
268 271 5.125100 TGGATTGCTCATTGTTTCTTGAC 57.875 39.130 0.00 0.00 0.00 3.18
337 341 4.458989 AGCTAATCAAGATTTTTGGCGTCA 59.541 37.500 0.02 0.00 32.50 4.35
354 358 2.290323 CGTCAGGGGTCTCCAAAATCTT 60.290 50.000 0.00 0.00 38.24 2.40
385 390 3.333680 TCCAGGGATCTTTTGTAGGCTTT 59.666 43.478 0.00 0.00 0.00 3.51
414 420 3.701542 TGTTGTTGTTATTTGCTGGTGGA 59.298 39.130 0.00 0.00 0.00 4.02
454 460 1.589320 GCGTATGTGCCGTTCGATAAA 59.411 47.619 0.00 0.00 0.00 1.40
501 507 2.775384 ACCTGGGTAAGAAGTTGTGACA 59.225 45.455 0.00 0.00 0.00 3.58
566 574 5.291293 GTGCGTACACATGTATTCCTTTT 57.709 39.130 0.00 0.00 46.61 2.27
567 575 5.321516 GTGCGTACACATGTATTCCTTTTC 58.678 41.667 0.00 0.00 46.61 2.29
577 585 8.748412 CACATGTATTCCTTTTCTTTTATGGGA 58.252 33.333 0.00 0.00 0.00 4.37
608 618 6.315144 CGTGTTTGATGGTGTTATAATCTGGA 59.685 38.462 0.00 0.00 0.00 3.86
609 619 7.148323 CGTGTTTGATGGTGTTATAATCTGGAA 60.148 37.037 0.00 0.00 0.00 3.53
610 620 8.686334 GTGTTTGATGGTGTTATAATCTGGAAT 58.314 33.333 0.00 0.00 0.00 3.01
611 621 8.685427 TGTTTGATGGTGTTATAATCTGGAATG 58.315 33.333 0.00 0.00 0.00 2.67
744 773 6.607689 CAATAGTCAACCTTTTATCGCACAA 58.392 36.000 0.00 0.00 0.00 3.33
892 1019 1.348064 TAGTGTAGTGTGGCTGCCTT 58.652 50.000 21.03 5.58 0.00 4.35
893 1020 1.348064 AGTGTAGTGTGGCTGCCTTA 58.652 50.000 21.03 5.76 0.00 2.69
1005 1143 3.951769 AAGGCCAGCCAGGATGCAC 62.952 63.158 12.03 0.00 41.22 4.57
1044 1188 3.011517 GGGAGGAGCAGGGCTTCA 61.012 66.667 0.00 0.00 39.88 3.02
1065 1221 4.070552 GACAAGGCCGCCGAGAGT 62.071 66.667 3.05 1.12 0.00 3.24
1066 1222 2.678934 ACAAGGCCGCCGAGAGTA 60.679 61.111 3.05 0.00 0.00 2.59
1112 1271 2.280524 CGGCCACGTGAAGGAACA 60.281 61.111 19.30 0.00 34.81 3.18
1114 1273 1.525077 GGCCACGTGAAGGAACACA 60.525 57.895 19.30 0.00 40.34 3.72
1120 1279 0.888736 CGTGAAGGAACACATGGCCA 60.889 55.000 8.56 8.56 40.34 5.36
1135 1294 0.473501 GGCCAGAGGAGGAGATGGAT 60.474 60.000 0.00 0.00 34.60 3.41
1140 1299 1.459158 AGGAGGAGATGGATGCGCT 60.459 57.895 9.73 0.00 0.00 5.92
1215 1383 2.289532 GCTCCACTGCCTCCTCTGT 61.290 63.158 0.00 0.00 0.00 3.41
1227 1395 1.002069 TCCTCTGTACCGTCCCCTTA 58.998 55.000 0.00 0.00 0.00 2.69
1274 1450 8.055790 TCCTCTCTTTCTTTCCTTTCTTTCTTT 58.944 33.333 0.00 0.00 0.00 2.52
1276 1452 7.920738 TCTCTTTCTTTCCTTTCTTTCTTTCG 58.079 34.615 0.00 0.00 0.00 3.46
1517 1723 2.731571 GCCGGATGCCAGAGGTACA 61.732 63.158 5.05 0.00 0.00 2.90
1549 1755 4.057428 GTCGCCGAGCACCAGACT 62.057 66.667 0.00 0.00 0.00 3.24
1652 1858 4.308458 CCGTCCACTTGGTGCCGA 62.308 66.667 0.00 0.00 36.34 5.54
1679 1885 2.048597 TGCAGTACGGCAAGGTCG 60.049 61.111 18.65 0.00 41.65 4.79
1735 1947 2.490217 CTCCTCGGCGTCGACAAT 59.510 61.111 8.66 0.00 40.88 2.71
1753 1968 5.334105 CGACAATCACGTTTTCCTCTTGATT 60.334 40.000 0.00 0.00 37.38 2.57
1754 1969 6.391227 ACAATCACGTTTTCCTCTTGATTT 57.609 33.333 0.00 0.00 35.25 2.17
1801 2016 2.669569 GTGTCCATGGTGTGCGCT 60.670 61.111 12.58 0.00 0.00 5.92
1903 2118 2.328099 CGGCAGGGCTGACTTTGTC 61.328 63.158 0.00 0.00 37.02 3.18
1912 2127 1.879796 GCTGACTTTGTCCTGGTGGAG 60.880 57.143 0.00 0.00 44.16 3.86
1976 2191 1.673808 GGACGAGCCCACGTTCCTAT 61.674 60.000 0.00 0.00 46.52 2.57
2011 2226 2.360852 CTGGTTCCAGCAGCAGGG 60.361 66.667 3.59 0.00 36.88 4.45
2013 2228 2.207501 CTGGTTCCAGCAGCAGGGAT 62.208 60.000 3.59 0.00 36.88 3.85
2014 2229 1.000396 GGTTCCAGCAGCAGGGATT 60.000 57.895 3.59 0.00 32.15 3.01
2020 2241 4.066139 GCAGCAGGGATTGGGGGT 62.066 66.667 0.00 0.00 0.00 4.95
2036 2257 4.101448 GTGATGGGGCTGCGTCCT 62.101 66.667 11.05 0.00 0.00 3.85
2087 2308 2.034048 GCTCTCCCCTTGGTCCGATC 62.034 65.000 0.00 0.00 0.00 3.69
2090 2324 0.687757 CTCCCCTTGGTCCGATCAGA 60.688 60.000 0.00 0.00 0.00 3.27
2096 2331 1.326951 TTGGTCCGATCAGATCCGCA 61.327 55.000 4.73 0.00 0.00 5.69
2097 2332 1.115326 TGGTCCGATCAGATCCGCAT 61.115 55.000 4.73 0.00 0.00 4.73
2117 2357 5.002464 CATCTGATGATGGGAAACAAACC 57.998 43.478 12.27 0.00 44.63 3.27
2131 2372 1.002315 ACAAACCATGCATTCAAGGCC 59.998 47.619 0.00 0.00 34.53 5.19
2142 2390 2.192664 TTCAAGGCCGTTCATGCTTA 57.807 45.000 0.00 0.00 0.00 3.09
2154 2403 5.584649 CCGTTCATGCTTACTATTTTGGAGA 59.415 40.000 0.00 0.00 0.00 3.71
2214 2475 6.615264 ATGCAGTTCATCATTGATGTAGTC 57.385 37.500 22.64 13.00 40.55 2.59
2216 2477 4.877823 GCAGTTCATCATTGATGTAGTCCA 59.122 41.667 22.64 3.38 40.55 4.02
2243 2508 9.672673 AGCTAGTGAACTTTAATGTCATTGTAT 57.327 29.630 8.39 0.00 0.00 2.29
2295 2564 3.684788 GTGCTAATCCTGTCGTGAAATGT 59.315 43.478 0.00 0.00 0.00 2.71
2297 2566 4.868171 TGCTAATCCTGTCGTGAAATGTAC 59.132 41.667 0.00 0.00 0.00 2.90
2348 2641 4.516092 GCAAGCATTTCATTTGCATCTC 57.484 40.909 3.77 0.00 44.88 2.75
2394 2694 8.248904 AGAGTAGAGCTCAATCTCATGTTAAT 57.751 34.615 24.11 4.41 46.47 1.40
2400 2700 8.566260 AGAGCTCAATCTCATGTTAATAAATGC 58.434 33.333 17.77 0.00 35.59 3.56
2401 2701 8.229253 AGCTCAATCTCATGTTAATAAATGCA 57.771 30.769 0.00 0.00 0.00 3.96
2469 2769 2.572104 GTGAGGAAGAAAGGAGGCCTTA 59.428 50.000 6.77 0.00 43.92 2.69
2473 2773 3.054065 AGGAAGAAAGGAGGCCTTATGTG 60.054 47.826 6.77 0.00 43.92 3.21
2475 2775 3.922171 AGAAAGGAGGCCTTATGTGAG 57.078 47.619 6.77 0.00 43.92 3.51
2531 2833 8.929260 TTGAATATTCAACATGCAGGATATCT 57.071 30.769 23.86 0.00 41.88 1.98
2533 2835 9.662947 TGAATATTCAACATGCAGGATATCTAG 57.337 33.333 15.82 0.00 33.55 2.43
2534 2836 8.503458 AATATTCAACATGCAGGATATCTAGC 57.497 34.615 4.84 7.73 0.00 3.42
2535 2837 5.557576 TTCAACATGCAGGATATCTAGCT 57.442 39.130 4.84 0.00 0.00 3.32
2537 2839 6.670695 TCAACATGCAGGATATCTAGCTTA 57.329 37.500 4.84 3.15 0.00 3.09
2540 2842 8.159447 TCAACATGCAGGATATCTAGCTTATTT 58.841 33.333 4.84 7.96 0.00 1.40
2541 2843 8.790718 CAACATGCAGGATATCTAGCTTATTTT 58.209 33.333 4.84 4.64 0.00 1.82
2563 3588 4.838904 TTAGAGGAAAAGGGTAGAAGCC 57.161 45.455 0.00 0.00 35.59 4.35
2573 3598 0.919710 GGTAGAAGCCCTGGTTCCAT 59.080 55.000 2.66 0.00 40.41 3.41
2574 3599 1.285078 GGTAGAAGCCCTGGTTCCATT 59.715 52.381 2.66 0.00 40.41 3.16
2576 3601 2.702270 AGAAGCCCTGGTTCCATTTT 57.298 45.000 2.66 0.00 40.41 1.82
2577 3602 2.529632 AGAAGCCCTGGTTCCATTTTC 58.470 47.619 2.66 0.00 40.41 2.29
2578 3603 2.158325 AGAAGCCCTGGTTCCATTTTCA 60.158 45.455 2.66 0.00 40.41 2.69
2579 3604 2.629017 AGCCCTGGTTCCATTTTCAT 57.371 45.000 0.00 0.00 0.00 2.57
2580 3605 3.756082 AGCCCTGGTTCCATTTTCATA 57.244 42.857 0.00 0.00 0.00 2.15
2585 3610 5.046663 GCCCTGGTTCCATTTTCATAGAAAA 60.047 40.000 7.30 7.30 0.00 2.29
2586 3611 6.398095 CCCTGGTTCCATTTTCATAGAAAAC 58.602 40.000 7.03 0.00 0.00 2.43
2587 3612 6.211384 CCCTGGTTCCATTTTCATAGAAAACT 59.789 38.462 7.03 0.00 0.00 2.66
2617 3642 8.910944 TCCAGAGTATAGTCTTATTACAACACC 58.089 37.037 7.39 0.00 0.00 4.16
2618 3643 8.915036 CCAGAGTATAGTCTTATTACAACACCT 58.085 37.037 7.39 0.00 0.00 4.00
2620 3645 9.696572 AGAGTATAGTCTTATTACAACACCTGA 57.303 33.333 4.11 0.00 0.00 3.86
2621 3646 9.953697 GAGTATAGTCTTATTACAACACCTGAG 57.046 37.037 0.00 0.00 0.00 3.35
2622 3647 8.915036 AGTATAGTCTTATTACAACACCTGAGG 58.085 37.037 0.00 0.00 0.00 3.86
2623 3648 5.422214 AGTCTTATTACAACACCTGAGGG 57.578 43.478 2.38 0.00 38.88 4.30
2624 3649 5.091552 AGTCTTATTACAACACCTGAGGGA 58.908 41.667 2.38 0.00 36.25 4.20
2625 3650 5.187967 AGTCTTATTACAACACCTGAGGGAG 59.812 44.000 2.38 0.00 36.25 4.30
2627 3652 2.409064 TTACAACACCTGAGGGAGGA 57.591 50.000 2.38 0.00 46.33 3.71
2628 3653 2.642171 TACAACACCTGAGGGAGGAT 57.358 50.000 2.38 0.00 46.33 3.24
2631 3656 3.256704 ACAACACCTGAGGGAGGATTAA 58.743 45.455 2.38 0.00 46.33 1.40
2632 3657 3.852578 ACAACACCTGAGGGAGGATTAAT 59.147 43.478 2.38 0.00 46.33 1.40
2633 3658 4.202441 CAACACCTGAGGGAGGATTAATG 58.798 47.826 2.38 0.00 46.33 1.90
2634 3659 3.464828 ACACCTGAGGGAGGATTAATGT 58.535 45.455 2.38 0.00 46.33 2.71
2635 3660 4.631234 ACACCTGAGGGAGGATTAATGTA 58.369 43.478 2.38 0.00 46.33 2.29
2637 3662 5.308237 ACACCTGAGGGAGGATTAATGTATC 59.692 44.000 2.38 0.00 46.33 2.24
2638 3663 5.307976 CACCTGAGGGAGGATTAATGTATCA 59.692 44.000 2.38 0.00 46.33 2.15
2639 3664 5.911178 ACCTGAGGGAGGATTAATGTATCAA 59.089 40.000 2.38 0.00 46.33 2.57
2640 3665 6.183361 ACCTGAGGGAGGATTAATGTATCAAC 60.183 42.308 2.38 0.00 46.33 3.18
2641 3666 6.187727 TGAGGGAGGATTAATGTATCAACC 57.812 41.667 0.00 0.00 0.00 3.77
2643 3668 5.235534 AGGGAGGATTAATGTATCAACCCT 58.764 41.667 0.00 0.00 42.00 4.34
2644 3669 5.073691 AGGGAGGATTAATGTATCAACCCTG 59.926 44.000 15.86 0.00 43.51 4.45
2645 3670 5.316987 GGAGGATTAATGTATCAACCCTGG 58.683 45.833 0.00 0.00 0.00 4.45
2648 3673 4.278419 GGATTAATGTATCAACCCTGGCAC 59.722 45.833 0.00 0.00 0.00 5.01
2649 3674 2.897271 AATGTATCAACCCTGGCACA 57.103 45.000 0.00 0.00 0.00 4.57
2652 3677 2.722094 TGTATCAACCCTGGCACAATC 58.278 47.619 0.00 0.00 38.70 2.67
2653 3678 2.024414 GTATCAACCCTGGCACAATCC 58.976 52.381 0.00 0.00 38.70 3.01
2654 3679 0.706433 ATCAACCCTGGCACAATCCT 59.294 50.000 0.00 0.00 38.70 3.24
2656 3681 1.707989 TCAACCCTGGCACAATCCTAA 59.292 47.619 0.00 0.00 38.70 2.69
2657 3682 2.109128 TCAACCCTGGCACAATCCTAAA 59.891 45.455 0.00 0.00 38.70 1.85
2658 3683 3.099141 CAACCCTGGCACAATCCTAAAT 58.901 45.455 0.00 0.00 38.70 1.40
2659 3684 2.738743 ACCCTGGCACAATCCTAAATG 58.261 47.619 0.00 0.00 38.70 2.32
2660 3685 2.034124 CCCTGGCACAATCCTAAATGG 58.966 52.381 0.00 0.00 38.70 3.16
2661 3686 2.034124 CCTGGCACAATCCTAAATGGG 58.966 52.381 0.00 0.00 38.70 4.00
2662 3687 2.358090 CCTGGCACAATCCTAAATGGGA 60.358 50.000 0.00 0.00 38.70 4.37
2663 3688 3.364549 CTGGCACAATCCTAAATGGGAA 58.635 45.455 0.00 0.00 38.70 3.97
2664 3689 3.768757 CTGGCACAATCCTAAATGGGAAA 59.231 43.478 0.00 0.00 38.70 3.13
2665 3690 3.768757 TGGCACAATCCTAAATGGGAAAG 59.231 43.478 0.00 0.00 39.02 2.62
2666 3691 3.132824 GGCACAATCCTAAATGGGAAAGG 59.867 47.826 0.00 0.00 39.02 3.11
2668 3693 4.466015 GCACAATCCTAAATGGGAAAGGAA 59.534 41.667 0.00 0.00 42.53 3.36
2669 3694 5.624509 GCACAATCCTAAATGGGAAAGGAAC 60.625 44.000 0.00 0.00 42.53 3.62
2672 3697 6.556874 ACAATCCTAAATGGGAAAGGAACAAA 59.443 34.615 0.00 0.00 42.53 2.83
2673 3698 7.071824 ACAATCCTAAATGGGAAAGGAACAAAA 59.928 33.333 0.00 0.00 42.53 2.44
2674 3699 7.625498 ATCCTAAATGGGAAAGGAACAAAAA 57.375 32.000 0.00 0.00 42.53 1.94
2675 3700 6.822442 TCCTAAATGGGAAAGGAACAAAAAC 58.178 36.000 0.00 0.00 36.47 2.43
2676 3701 6.613679 TCCTAAATGGGAAAGGAACAAAAACT 59.386 34.615 0.00 0.00 36.47 2.66
2677 3702 7.785506 TCCTAAATGGGAAAGGAACAAAAACTA 59.214 33.333 0.00 0.00 36.47 2.24
2678 3703 8.425703 CCTAAATGGGAAAGGAACAAAAACTAA 58.574 33.333 0.00 0.00 31.64 2.24
2679 3704 9.825109 CTAAATGGGAAAGGAACAAAAACTAAA 57.175 29.630 0.00 0.00 0.00 1.85
2681 3706 9.693739 AAATGGGAAAGGAACAAAAACTAAAAT 57.306 25.926 0.00 0.00 0.00 1.82
2683 3708 7.852263 TGGGAAAGGAACAAAAACTAAAATGA 58.148 30.769 0.00 0.00 0.00 2.57
2684 3709 7.766738 TGGGAAAGGAACAAAAACTAAAATGAC 59.233 33.333 0.00 0.00 0.00 3.06
2685 3710 7.042992 GGGAAAGGAACAAAAACTAAAATGACG 60.043 37.037 0.00 0.00 0.00 4.35
2686 3711 7.490079 GGAAAGGAACAAAAACTAAAATGACGT 59.510 33.333 0.00 0.00 0.00 4.34
2687 3712 7.980742 AAGGAACAAAAACTAAAATGACGTC 57.019 32.000 9.11 9.11 0.00 4.34
2688 3713 7.090953 AGGAACAAAAACTAAAATGACGTCA 57.909 32.000 22.48 22.48 0.00 4.35
2689 3714 6.970613 AGGAACAAAAACTAAAATGACGTCAC 59.029 34.615 22.71 1.52 0.00 3.67
2690 3715 6.075780 GGAACAAAAACTAAAATGACGTCACG 60.076 38.462 22.71 9.50 0.00 4.35
2691 3716 5.267776 ACAAAAACTAAAATGACGTCACGG 58.732 37.500 22.71 11.40 0.00 4.94
2692 3717 4.477302 AAAACTAAAATGACGTCACGGG 57.523 40.909 22.71 11.76 0.00 5.28
2693 3718 3.389925 AACTAAAATGACGTCACGGGA 57.610 42.857 22.71 6.14 0.00 5.14
2694 3719 2.955614 ACTAAAATGACGTCACGGGAG 58.044 47.619 22.71 17.59 0.00 4.30
2696 3721 0.321298 AAAATGACGTCACGGGAGGG 60.321 55.000 22.71 0.00 33.26 4.30
2697 3722 2.798148 AAATGACGTCACGGGAGGGC 62.798 60.000 22.71 9.68 37.45 5.19
2699 3724 3.998672 GACGTCACGGGAGGGCAA 61.999 66.667 8.69 0.00 36.91 4.52
2700 3725 4.309950 ACGTCACGGGAGGGCAAC 62.310 66.667 12.66 0.00 33.26 4.17
2701 3726 4.308458 CGTCACGGGAGGGCAACA 62.308 66.667 0.00 0.00 39.74 3.33
2703 3728 2.847234 TCACGGGAGGGCAACACT 60.847 61.111 0.00 0.00 39.74 3.55
2704 3729 2.358737 CACGGGAGGGCAACACTC 60.359 66.667 0.00 0.00 39.74 3.51
2706 3731 2.147387 ACGGGAGGGCAACACTCTT 61.147 57.895 0.00 0.00 35.14 2.85
2707 3732 1.672356 CGGGAGGGCAACACTCTTG 60.672 63.158 0.00 0.00 35.14 3.02
2708 3733 1.303643 GGGAGGGCAACACTCTTGG 60.304 63.158 0.00 0.00 35.14 3.61
2709 3734 1.303643 GGAGGGCAACACTCTTGGG 60.304 63.158 0.00 0.00 35.14 4.12
2710 3735 1.303643 GAGGGCAACACTCTTGGGG 60.304 63.158 0.00 0.00 39.74 4.96
2711 3736 2.283173 GGGCAACACTCTTGGGGG 60.283 66.667 0.00 0.00 39.74 5.40
2746 3771 5.545658 TTTTCGACAAGGATGTATTGAGC 57.454 39.130 0.00 0.00 40.74 4.26
2747 3772 3.179443 TCGACAAGGATGTATTGAGCC 57.821 47.619 0.00 0.00 40.74 4.70
2748 3773 2.766263 TCGACAAGGATGTATTGAGCCT 59.234 45.455 0.00 0.00 40.74 4.58
2750 3775 4.404394 TCGACAAGGATGTATTGAGCCTAA 59.596 41.667 0.00 0.00 40.74 2.69
2751 3776 4.508124 CGACAAGGATGTATTGAGCCTAAC 59.492 45.833 0.00 0.00 40.74 2.34
2752 3777 5.428253 GACAAGGATGTATTGAGCCTAACA 58.572 41.667 0.00 0.00 40.74 2.41
2755 3780 5.028549 AGGATGTATTGAGCCTAACACTG 57.971 43.478 0.00 0.00 0.00 3.66
2756 3781 4.130118 GGATGTATTGAGCCTAACACTGG 58.870 47.826 0.00 0.00 0.00 4.00
2757 3782 3.627395 TGTATTGAGCCTAACACTGGG 57.373 47.619 0.00 0.00 0.00 4.45
2758 3783 2.238646 TGTATTGAGCCTAACACTGGGG 59.761 50.000 0.00 0.00 0.00 4.96
2759 3784 0.625849 ATTGAGCCTAACACTGGGGG 59.374 55.000 0.00 0.00 0.00 5.40
2760 3785 2.137177 TTGAGCCTAACACTGGGGGC 62.137 60.000 0.00 0.00 44.38 5.80
2761 3786 3.339093 AGCCTAACACTGGGGGCC 61.339 66.667 0.00 0.00 45.07 5.80
2762 3787 4.442454 GCCTAACACTGGGGGCCC 62.442 72.222 15.76 15.76 38.77 5.80
2764 3789 2.543797 CCTAACACTGGGGGCCCAA 61.544 63.158 26.86 13.71 46.63 4.12
2765 3790 1.462928 CTAACACTGGGGGCCCAAA 59.537 57.895 26.86 11.34 46.63 3.28
2766 3791 0.178947 CTAACACTGGGGGCCCAAAA 60.179 55.000 26.86 8.41 46.63 2.44
2768 3793 0.489567 AACACTGGGGGCCCAAAATA 59.510 50.000 26.86 3.09 46.63 1.40
2769 3794 0.715987 ACACTGGGGGCCCAAAATAT 59.284 50.000 26.86 0.64 46.63 1.28
2770 3795 1.122227 CACTGGGGGCCCAAAATATG 58.878 55.000 26.86 9.92 46.63 1.78
2771 3796 0.690744 ACTGGGGGCCCAAAATATGC 60.691 55.000 26.86 4.33 46.63 3.14
2780 3805 5.289083 GGCCCAAAATATGCCAATTTAGA 57.711 39.130 0.00 0.00 44.70 2.10
2781 3806 5.056480 GGCCCAAAATATGCCAATTTAGAC 58.944 41.667 0.00 0.00 44.70 2.59
2782 3807 5.056480 GCCCAAAATATGCCAATTTAGACC 58.944 41.667 0.00 0.00 0.00 3.85
2783 3808 5.396213 GCCCAAAATATGCCAATTTAGACCA 60.396 40.000 0.00 0.00 0.00 4.02
2786 3811 6.339730 CAAAATATGCCAATTTAGACCAGCA 58.660 36.000 0.00 0.00 34.28 4.41
2787 3812 6.543430 AAATATGCCAATTTAGACCAGCAA 57.457 33.333 0.00 0.00 33.35 3.91
2788 3813 3.874392 ATGCCAATTTAGACCAGCAAC 57.126 42.857 0.00 0.00 33.35 4.17
2791 3816 2.672195 GCCAATTTAGACCAGCAACAGC 60.672 50.000 0.00 0.00 0.00 4.40
2792 3817 2.557924 CCAATTTAGACCAGCAACAGCA 59.442 45.455 0.00 0.00 0.00 4.41
2793 3818 3.366679 CCAATTTAGACCAGCAACAGCAG 60.367 47.826 0.00 0.00 0.00 4.24
2794 3819 1.238439 TTTAGACCAGCAACAGCAGC 58.762 50.000 0.00 0.00 0.00 5.25
2795 3820 0.108396 TTAGACCAGCAACAGCAGCA 59.892 50.000 0.00 0.00 0.00 4.41
2798 3823 2.908428 CCAGCAACAGCAGCACCA 60.908 61.111 0.00 0.00 0.00 4.17
2799 3824 2.491897 CCAGCAACAGCAGCACCAA 61.492 57.895 0.00 0.00 0.00 3.67
2801 3826 0.872881 CAGCAACAGCAGCACCAAAC 60.873 55.000 0.00 0.00 0.00 2.93
2802 3827 1.592400 GCAACAGCAGCACCAAACC 60.592 57.895 0.00 0.00 0.00 3.27
2804 3829 0.390124 CAACAGCAGCACCAAACCAT 59.610 50.000 0.00 0.00 0.00 3.55
2805 3830 0.675633 AACAGCAGCACCAAACCATC 59.324 50.000 0.00 0.00 0.00 3.51
2806 3831 0.178981 ACAGCAGCACCAAACCATCT 60.179 50.000 0.00 0.00 0.00 2.90
2807 3832 0.963962 CAGCAGCACCAAACCATCTT 59.036 50.000 0.00 0.00 0.00 2.40
2808 3833 1.068055 CAGCAGCACCAAACCATCTTC 60.068 52.381 0.00 0.00 0.00 2.87
2810 3835 1.547372 GCAGCACCAAACCATCTTCAT 59.453 47.619 0.00 0.00 0.00 2.57
2811 3836 2.416431 GCAGCACCAAACCATCTTCATC 60.416 50.000 0.00 0.00 0.00 2.92
2812 3837 3.087031 CAGCACCAAACCATCTTCATCT 58.913 45.455 0.00 0.00 0.00 2.90
2813 3838 3.508793 CAGCACCAAACCATCTTCATCTT 59.491 43.478 0.00 0.00 0.00 2.40
2815 3840 3.119352 GCACCAAACCATCTTCATCTTCC 60.119 47.826 0.00 0.00 0.00 3.46
2816 3841 3.445096 CACCAAACCATCTTCATCTTCCC 59.555 47.826 0.00 0.00 0.00 3.97
2817 3842 3.075882 ACCAAACCATCTTCATCTTCCCA 59.924 43.478 0.00 0.00 0.00 4.37
2818 3843 3.698040 CCAAACCATCTTCATCTTCCCAG 59.302 47.826 0.00 0.00 0.00 4.45
2819 3844 2.725221 ACCATCTTCATCTTCCCAGC 57.275 50.000 0.00 0.00 0.00 4.85
2820 3845 1.213926 ACCATCTTCATCTTCCCAGCC 59.786 52.381 0.00 0.00 0.00 4.85
2821 3846 1.478288 CCATCTTCATCTTCCCAGCCC 60.478 57.143 0.00 0.00 0.00 5.19
2822 3847 0.849417 ATCTTCATCTTCCCAGCCCC 59.151 55.000 0.00 0.00 0.00 5.80
2823 3848 1.153086 CTTCATCTTCCCAGCCCCG 60.153 63.158 0.00 0.00 0.00 5.73
2824 3849 3.344137 TTCATCTTCCCAGCCCCGC 62.344 63.158 0.00 0.00 0.00 6.13
2839 3864 4.093952 CGCGCCAGCTTCACCTTG 62.094 66.667 0.00 0.00 42.32 3.61
2841 3866 1.671054 GCGCCAGCTTCACCTTGTA 60.671 57.895 0.00 0.00 41.01 2.41
2842 3867 1.912371 GCGCCAGCTTCACCTTGTAC 61.912 60.000 0.00 0.00 41.01 2.90
2844 3869 1.878102 CGCCAGCTTCACCTTGTACTT 60.878 52.381 0.00 0.00 0.00 2.24
2845 3870 1.807142 GCCAGCTTCACCTTGTACTTC 59.193 52.381 0.00 0.00 0.00 3.01
2846 3871 2.810400 GCCAGCTTCACCTTGTACTTCA 60.810 50.000 0.00 0.00 0.00 3.02
2848 3873 3.686726 CCAGCTTCACCTTGTACTTCATC 59.313 47.826 0.00 0.00 0.00 2.92
2849 3874 3.686726 CAGCTTCACCTTGTACTTCATCC 59.313 47.826 0.00 0.00 0.00 3.51
2850 3875 3.327757 AGCTTCACCTTGTACTTCATCCA 59.672 43.478 0.00 0.00 0.00 3.41
2851 3876 3.437049 GCTTCACCTTGTACTTCATCCAC 59.563 47.826 0.00 0.00 0.00 4.02
2852 3877 4.641396 CTTCACCTTGTACTTCATCCACA 58.359 43.478 0.00 0.00 0.00 4.17
2853 3878 4.698201 TCACCTTGTACTTCATCCACAA 57.302 40.909 0.00 0.00 0.00 3.33
2854 3879 5.241403 TCACCTTGTACTTCATCCACAAT 57.759 39.130 0.00 0.00 32.14 2.71
2855 3880 5.630121 TCACCTTGTACTTCATCCACAATT 58.370 37.500 0.00 0.00 32.14 2.32
2856 3881 5.705441 TCACCTTGTACTTCATCCACAATTC 59.295 40.000 0.00 0.00 32.14 2.17
2857 3882 5.010282 ACCTTGTACTTCATCCACAATTCC 58.990 41.667 0.00 0.00 32.14 3.01
2858 3883 5.222130 ACCTTGTACTTCATCCACAATTCCT 60.222 40.000 0.00 0.00 32.14 3.36
2861 3886 2.450476 ACTTCATCCACAATTCCTGCC 58.550 47.619 0.00 0.00 0.00 4.85
2864 3889 4.263905 ACTTCATCCACAATTCCTGCCTTA 60.264 41.667 0.00 0.00 0.00 2.69
2866 3891 4.464008 TCATCCACAATTCCTGCCTTATC 58.536 43.478 0.00 0.00 0.00 1.75
2870 3895 2.360165 CACAATTCCTGCCTTATCAGCC 59.640 50.000 0.00 0.00 32.87 4.85
2871 3896 2.243221 ACAATTCCTGCCTTATCAGCCT 59.757 45.455 0.00 0.00 32.87 4.58
2872 3897 2.621998 CAATTCCTGCCTTATCAGCCTG 59.378 50.000 0.00 0.00 32.87 4.85
2873 3898 0.548031 TTCCTGCCTTATCAGCCTGG 59.452 55.000 0.00 0.00 32.87 4.45
2874 3899 1.527844 CCTGCCTTATCAGCCTGGC 60.528 63.158 11.65 11.65 45.10 4.85
2875 3900 1.530771 CTGCCTTATCAGCCTGGCT 59.469 57.895 17.22 17.22 45.11 4.75
2876 3901 0.534652 CTGCCTTATCAGCCTGGCTC 60.535 60.000 20.49 6.27 45.11 4.70
2877 3902 0.984961 TGCCTTATCAGCCTGGCTCT 60.985 55.000 20.49 11.88 45.11 4.09
2878 3903 0.534652 GCCTTATCAGCCTGGCTCTG 60.535 60.000 20.49 10.17 41.92 3.35
2879 3904 0.108207 CCTTATCAGCCTGGCTCTGG 59.892 60.000 20.49 12.31 36.40 3.86
2880 3905 0.534652 CTTATCAGCCTGGCTCTGGC 60.535 60.000 20.49 13.00 46.61 4.85
2892 3917 1.020437 GCTCTGGCCAAAGTATCAGC 58.980 55.000 8.15 2.71 0.00 4.26
2893 3918 1.679944 GCTCTGGCCAAAGTATCAGCA 60.680 52.381 8.15 0.00 0.00 4.41
2894 3919 2.286872 CTCTGGCCAAAGTATCAGCAG 58.713 52.381 7.01 0.00 0.00 4.24
2896 3921 2.093288 TCTGGCCAAAGTATCAGCAGAG 60.093 50.000 7.01 0.00 0.00 3.35
2897 3922 1.065199 TGGCCAAAGTATCAGCAGAGG 60.065 52.381 0.61 0.00 0.00 3.69
2898 3923 1.210478 GGCCAAAGTATCAGCAGAGGA 59.790 52.381 0.00 0.00 0.00 3.71
2899 3924 2.284190 GCCAAAGTATCAGCAGAGGAC 58.716 52.381 0.00 0.00 0.00 3.85
2901 3926 3.620966 GCCAAAGTATCAGCAGAGGACTT 60.621 47.826 4.04 4.04 36.15 3.01
2902 3927 4.187694 CCAAAGTATCAGCAGAGGACTTC 58.812 47.826 8.92 0.00 34.52 3.01
2903 3928 4.081198 CCAAAGTATCAGCAGAGGACTTCT 60.081 45.833 8.92 0.00 34.52 2.85
2905 4514 4.734398 AGTATCAGCAGAGGACTTCTTG 57.266 45.455 0.00 0.00 32.41 3.02
2908 4517 1.001746 TCAGCAGAGGACTTCTTGCAG 59.998 52.381 10.17 4.37 34.45 4.41
2928 4537 4.413928 TCCCAAAAGGATGCCACG 57.586 55.556 0.00 0.00 40.93 4.94
2929 4538 1.976474 TCCCAAAAGGATGCCACGC 60.976 57.895 0.00 0.00 40.93 5.34
2931 4540 1.508088 CCAAAAGGATGCCACGCTC 59.492 57.895 0.00 0.00 0.00 5.03
2932 4541 1.243342 CCAAAAGGATGCCACGCTCA 61.243 55.000 0.00 0.00 0.00 4.26
2933 4542 0.109597 CAAAAGGATGCCACGCTCAC 60.110 55.000 0.00 0.00 0.00 3.51
2934 4543 1.244019 AAAAGGATGCCACGCTCACC 61.244 55.000 0.00 0.00 0.00 4.02
2935 4544 2.410322 AAAGGATGCCACGCTCACCA 62.410 55.000 0.00 0.00 0.00 4.17
2936 4545 3.127533 GGATGCCACGCTCACCAC 61.128 66.667 0.00 0.00 0.00 4.16
2937 4546 3.127533 GATGCCACGCTCACCACC 61.128 66.667 0.00 0.00 0.00 4.61
2941 4550 4.988598 CCACGCTCACCACCGCTT 62.989 66.667 0.00 0.00 0.00 4.68
2942 4551 3.716006 CACGCTCACCACCGCTTG 61.716 66.667 0.00 0.00 0.00 4.01
2943 4552 4.235762 ACGCTCACCACCGCTTGT 62.236 61.111 0.00 0.00 0.00 3.16
2944 4553 2.972505 CGCTCACCACCGCTTGTT 60.973 61.111 0.00 0.00 0.00 2.83
2945 4554 2.946762 GCTCACCACCGCTTGTTC 59.053 61.111 0.00 0.00 0.00 3.18
2946 4555 1.598130 GCTCACCACCGCTTGTTCT 60.598 57.895 0.00 0.00 0.00 3.01
2950 4559 0.588252 CACCACCGCTTGTTCTCTTG 59.412 55.000 0.00 0.00 0.00 3.02
2951 4560 0.180406 ACCACCGCTTGTTCTCTTGT 59.820 50.000 0.00 0.00 0.00 3.16
2952 4561 0.588252 CCACCGCTTGTTCTCTTGTG 59.412 55.000 0.00 0.00 0.00 3.33
2953 4562 1.299541 CACCGCTTGTTCTCTTGTGT 58.700 50.000 0.00 0.00 0.00 3.72
2955 4564 2.097466 CACCGCTTGTTCTCTTGTGTTT 59.903 45.455 0.00 0.00 0.00 2.83
2956 4565 2.354821 ACCGCTTGTTCTCTTGTGTTTC 59.645 45.455 0.00 0.00 0.00 2.78
2957 4566 2.287009 CCGCTTGTTCTCTTGTGTTTCC 60.287 50.000 0.00 0.00 0.00 3.13
2958 4567 2.287009 CGCTTGTTCTCTTGTGTTTCCC 60.287 50.000 0.00 0.00 0.00 3.97
2959 4568 2.687935 GCTTGTTCTCTTGTGTTTCCCA 59.312 45.455 0.00 0.00 0.00 4.37
2960 4569 3.489229 GCTTGTTCTCTTGTGTTTCCCAC 60.489 47.826 0.00 0.00 44.78 4.61
2964 4573 0.307760 CTCTTGTGTTTCCCACGCAC 59.692 55.000 0.00 0.00 45.87 5.34
2965 4574 0.393132 TCTTGTGTTTCCCACGCACA 60.393 50.000 0.00 0.00 45.87 4.57
2966 4575 0.667993 CTTGTGTTTCCCACGCACAT 59.332 50.000 0.00 0.00 45.87 3.21
2969 4578 2.688446 TTGTGTTTCCCACGCACATAAA 59.312 40.909 0.00 0.00 45.87 1.40
2971 4580 3.498082 GTGTTTCCCACGCACATAAATC 58.502 45.455 0.00 0.00 35.77 2.17
2972 4581 2.490115 TGTTTCCCACGCACATAAATCC 59.510 45.455 0.00 0.00 0.00 3.01
2974 4583 1.745232 TCCCACGCACATAAATCCAC 58.255 50.000 0.00 0.00 0.00 4.02
2975 4584 1.280710 TCCCACGCACATAAATCCACT 59.719 47.619 0.00 0.00 0.00 4.00
2976 4585 2.502130 TCCCACGCACATAAATCCACTA 59.498 45.455 0.00 0.00 0.00 2.74
2977 4586 2.872245 CCCACGCACATAAATCCACTAG 59.128 50.000 0.00 0.00 0.00 2.57
2978 4587 3.531538 CCACGCACATAAATCCACTAGT 58.468 45.455 0.00 0.00 0.00 2.57
2979 4588 3.309682 CCACGCACATAAATCCACTAGTG 59.690 47.826 16.34 16.34 0.00 2.74
2980 4589 4.180817 CACGCACATAAATCCACTAGTGA 58.819 43.478 24.68 10.67 0.00 3.41
2981 4590 4.032900 CACGCACATAAATCCACTAGTGAC 59.967 45.833 24.68 0.00 0.00 3.67
2982 4591 4.180817 CGCACATAAATCCACTAGTGACA 58.819 43.478 24.68 10.56 0.00 3.58
2983 4592 4.629634 CGCACATAAATCCACTAGTGACAA 59.370 41.667 24.68 9.54 0.00 3.18
2984 4593 5.121611 CGCACATAAATCCACTAGTGACAAA 59.878 40.000 24.68 7.03 0.00 2.83
2985 4594 6.348132 CGCACATAAATCCACTAGTGACAAAA 60.348 38.462 24.68 7.02 0.00 2.44
2986 4595 7.023575 GCACATAAATCCACTAGTGACAAAAG 58.976 38.462 24.68 6.34 0.00 2.27
2987 4596 7.023575 CACATAAATCCACTAGTGACAAAAGC 58.976 38.462 24.68 0.00 0.00 3.51
2988 4597 6.942576 ACATAAATCCACTAGTGACAAAAGCT 59.057 34.615 24.68 2.98 0.00 3.74
2989 4598 7.448469 ACATAAATCCACTAGTGACAAAAGCTT 59.552 33.333 24.68 0.00 0.00 3.74
2990 4599 8.946085 CATAAATCCACTAGTGACAAAAGCTTA 58.054 33.333 24.68 9.66 0.00 3.09
2991 4600 6.803154 AATCCACTAGTGACAAAAGCTTAC 57.197 37.500 24.68 0.00 0.00 2.34
2992 4601 5.284861 TCCACTAGTGACAAAAGCTTACA 57.715 39.130 24.68 0.00 0.00 2.41
2995 4604 6.770785 TCCACTAGTGACAAAAGCTTACAATT 59.229 34.615 24.68 0.00 0.00 2.32
2997 4606 7.920682 CCACTAGTGACAAAAGCTTACAATTTT 59.079 33.333 24.68 0.00 0.00 1.82
2998 4607 9.301153 CACTAGTGACAAAAGCTTACAATTTTT 57.699 29.630 18.45 0.00 0.00 1.94
3000 4609 9.736023 CTAGTGACAAAAGCTTACAATTTTTCT 57.264 29.630 0.00 0.00 0.00 2.52
3001 4610 8.411318 AGTGACAAAAGCTTACAATTTTTCTG 57.589 30.769 0.00 0.00 0.00 3.02
3003 4612 8.534778 GTGACAAAAGCTTACAATTTTTCTGAG 58.465 33.333 0.00 0.00 0.00 3.35
3004 4613 7.706179 TGACAAAAGCTTACAATTTTTCTGAGG 59.294 33.333 0.00 0.00 0.00 3.86
3005 4614 7.781056 ACAAAAGCTTACAATTTTTCTGAGGA 58.219 30.769 0.00 0.00 0.00 3.71
3009 4618 7.150783 AGCTTACAATTTTTCTGAGGATCAC 57.849 36.000 0.00 0.00 42.56 3.06
3023 4632 4.287766 AGGATCACCTGTAAACCAAGTC 57.712 45.455 0.00 0.00 45.92 3.01
3024 4633 3.650942 AGGATCACCTGTAAACCAAGTCA 59.349 43.478 0.00 0.00 45.92 3.41
3026 4635 4.455877 GGATCACCTGTAAACCAAGTCAAG 59.544 45.833 0.00 0.00 0.00 3.02
3027 4636 4.497291 TCACCTGTAAACCAAGTCAAGT 57.503 40.909 0.00 0.00 0.00 3.16
3028 4637 4.850680 TCACCTGTAAACCAAGTCAAGTT 58.149 39.130 0.00 0.00 0.00 2.66
3030 4639 5.712917 TCACCTGTAAACCAAGTCAAGTTTT 59.287 36.000 0.00 0.00 37.39 2.43
3031 4640 6.885376 TCACCTGTAAACCAAGTCAAGTTTTA 59.115 34.615 0.00 0.00 37.39 1.52
3032 4641 6.970613 CACCTGTAAACCAAGTCAAGTTTTAC 59.029 38.462 0.00 0.00 37.39 2.01
3033 4642 6.095860 ACCTGTAAACCAAGTCAAGTTTTACC 59.904 38.462 0.00 0.00 37.39 2.85
3034 4643 6.095720 CCTGTAAACCAAGTCAAGTTTTACCA 59.904 38.462 0.00 0.00 37.39 3.25
3035 4644 7.201875 CCTGTAAACCAAGTCAAGTTTTACCAT 60.202 37.037 0.00 0.00 37.39 3.55
3037 4646 9.186837 TGTAAACCAAGTCAAGTTTTACCATTA 57.813 29.630 0.00 0.00 37.39 1.90
3040 4649 9.945904 AAACCAAGTCAAGTTTTACCATTAAAA 57.054 25.926 0.00 0.00 35.26 1.52
3056 4665 7.491682 ACCATTAAAACACATATCATTCCTGC 58.508 34.615 0.00 0.00 0.00 4.85
3057 4666 7.123997 ACCATTAAAACACATATCATTCCTGCA 59.876 33.333 0.00 0.00 0.00 4.41
3058 4667 8.145767 CCATTAAAACACATATCATTCCTGCAT 58.854 33.333 0.00 0.00 0.00 3.96
3059 4668 9.537192 CATTAAAACACATATCATTCCTGCATT 57.463 29.630 0.00 0.00 0.00 3.56
3061 4670 9.585099 TTAAAACACATATCATTCCTGCATTTC 57.415 29.630 0.00 0.00 0.00 2.17
3062 4671 7.414222 AAACACATATCATTCCTGCATTTCT 57.586 32.000 0.00 0.00 0.00 2.52
3064 4673 7.741027 ACACATATCATTCCTGCATTTCTAG 57.259 36.000 0.00 0.00 0.00 2.43
3065 4674 7.512130 ACACATATCATTCCTGCATTTCTAGA 58.488 34.615 0.00 0.00 0.00 2.43
3067 4676 9.662947 CACATATCATTCCTGCATTTCTAGATA 57.337 33.333 0.00 0.00 0.00 1.98
3068 4677 9.887629 ACATATCATTCCTGCATTTCTAGATAG 57.112 33.333 0.00 0.00 0.00 2.08
3070 4679 5.555017 TCATTCCTGCATTTCTAGATAGCC 58.445 41.667 0.00 0.00 0.00 3.93
3071 4680 4.357918 TTCCTGCATTTCTAGATAGCCC 57.642 45.455 0.00 0.00 0.00 5.19
3072 4681 3.317406 TCCTGCATTTCTAGATAGCCCA 58.683 45.455 0.00 0.00 0.00 5.36
3073 4682 3.326006 TCCTGCATTTCTAGATAGCCCAG 59.674 47.826 0.00 0.00 0.00 4.45
3075 4684 4.563168 CCTGCATTTCTAGATAGCCCAGAG 60.563 50.000 0.00 0.00 0.00 3.35
3076 4685 4.226384 TGCATTTCTAGATAGCCCAGAGA 58.774 43.478 0.00 0.00 0.00 3.10
3077 4686 4.282957 TGCATTTCTAGATAGCCCAGAGAG 59.717 45.833 0.00 0.00 0.00 3.20
3078 4687 4.283212 GCATTTCTAGATAGCCCAGAGAGT 59.717 45.833 0.00 0.00 0.00 3.24
3085 4694 4.025858 GCCCAGAGAGTGGCAGCA 62.026 66.667 0.00 0.00 46.45 4.41
3088 4697 1.030488 CCCAGAGAGTGGCAGCATTG 61.030 60.000 0.00 0.00 46.45 2.82
3090 4699 1.408405 CCAGAGAGTGGCAGCATTGAT 60.408 52.381 0.00 0.00 40.39 2.57
3091 4700 1.941294 CAGAGAGTGGCAGCATTGATC 59.059 52.381 0.00 0.00 0.00 2.92
3095 4704 2.089980 GAGTGGCAGCATTGATCAAGT 58.910 47.619 14.54 0.00 0.00 3.16
3096 4705 2.490903 GAGTGGCAGCATTGATCAAGTT 59.509 45.455 14.54 1.74 0.00 2.66
3097 4706 3.689347 AGTGGCAGCATTGATCAAGTTA 58.311 40.909 14.54 0.00 0.00 2.24
3098 4707 4.081406 AGTGGCAGCATTGATCAAGTTAA 58.919 39.130 14.54 0.00 0.00 2.01
3100 4709 5.887598 AGTGGCAGCATTGATCAAGTTAATA 59.112 36.000 14.54 0.00 0.00 0.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 2.238646 CCAACCTATGCTAACCACCAGA 59.761 50.000 0.00 0.00 0.00 3.86
86 87 1.606668 GAACAATGTTGCCGGAGAACA 59.393 47.619 18.58 18.58 37.70 3.18
89 90 1.879380 CTTGAACAATGTTGCCGGAGA 59.121 47.619 5.05 0.00 0.00 3.71
100 101 3.575256 TGCATCAGAAAGGCTTGAACAAT 59.425 39.130 0.00 0.00 0.00 2.71
117 118 2.219458 CCATCCTCACATCAGTGCATC 58.781 52.381 0.00 0.00 45.49 3.91
129 130 1.444933 ACCAACCAAGACCATCCTCA 58.555 50.000 0.00 0.00 0.00 3.86
137 138 3.118592 CCAGAGAGGATACCAACCAAGAC 60.119 52.174 0.00 0.00 41.22 3.01
186 189 2.619177 TCTAAGCTGACATCCGTAGCTC 59.381 50.000 0.00 0.00 46.34 4.09
283 286 7.637301 GCATGGAGTAGGAGAAATAAACCCTTA 60.637 40.741 0.00 0.00 0.00 2.69
337 341 3.010250 GGTACAAGATTTTGGAGACCCCT 59.990 47.826 0.57 0.00 38.66 4.79
378 383 3.957497 ACAACAACATGACCAAAAGCCTA 59.043 39.130 0.00 0.00 0.00 3.93
385 390 5.752472 CAGCAAATAACAACAACATGACCAA 59.248 36.000 0.00 0.00 0.00 3.67
414 420 1.000019 ATGGCTGATGTGCTGGCTT 60.000 52.632 0.00 0.00 40.89 4.35
443 449 4.689345 ACCTTTCTCACTTTTATCGAACGG 59.311 41.667 0.00 0.00 0.00 4.44
446 452 5.001232 CCCACCTTTCTCACTTTTATCGAA 58.999 41.667 0.00 0.00 0.00 3.71
454 460 2.443255 ACACATCCCACCTTTCTCACTT 59.557 45.455 0.00 0.00 0.00 3.16
501 507 4.186159 ACTACAAAGTAGCACACAAACGT 58.814 39.130 4.20 0.00 32.84 3.99
514 521 4.990426 ACGCGTAACCAAATACTACAAAGT 59.010 37.500 11.67 0.00 39.91 2.66
577 585 1.202879 ACACCATCAAACACGTGGGAT 60.203 47.619 21.57 16.07 37.33 3.85
608 618 2.095059 GTGCTTTTGACTCCATCGCATT 60.095 45.455 0.00 0.00 0.00 3.56
609 619 1.470098 GTGCTTTTGACTCCATCGCAT 59.530 47.619 0.00 0.00 0.00 4.73
610 620 0.874390 GTGCTTTTGACTCCATCGCA 59.126 50.000 0.00 0.00 0.00 5.10
611 621 1.129437 GAGTGCTTTTGACTCCATCGC 59.871 52.381 0.00 0.00 34.84 4.58
849 882 4.961438 AATGCTTCCTCATTGTGGTTTT 57.039 36.364 4.76 0.00 35.52 2.43
892 1019 3.391296 AGGTCTGAGAACAAAAGGTGCTA 59.609 43.478 0.00 0.00 34.62 3.49
893 1020 2.173569 AGGTCTGAGAACAAAAGGTGCT 59.826 45.455 0.00 0.00 38.46 4.40
1026 1170 4.168291 GAAGCCCTGCTCCTCCCG 62.168 72.222 0.00 0.00 38.25 5.14
1058 1211 0.179134 CGCCTTCTTGGTACTCTCGG 60.179 60.000 0.00 0.00 38.35 4.63
1065 1221 3.702048 AGCCGCGCCTTCTTGGTA 61.702 61.111 0.00 0.00 38.35 3.25
1092 1248 2.798364 TTCCTTCACGTGGCCGTCA 61.798 57.895 17.00 0.00 46.28 4.35
1110 1269 1.229625 TCCTCCTCTGGCCATGTGT 60.230 57.895 5.51 0.00 0.00 3.72
1112 1271 0.030297 ATCTCCTCCTCTGGCCATGT 60.030 55.000 5.51 0.00 0.00 3.21
1114 1273 0.767446 CCATCTCCTCCTCTGGCCAT 60.767 60.000 5.51 0.00 0.00 4.40
1120 1279 1.470996 GCGCATCCATCTCCTCCTCT 61.471 60.000 0.30 0.00 0.00 3.69
1150 1312 2.823147 CTCTCTCGGGCCGTACGT 60.823 66.667 27.32 0.00 0.00 3.57
1156 1324 3.223589 GAGCTCCTCTCTCGGGCC 61.224 72.222 0.87 0.00 38.78 5.80
1208 1376 1.002069 TAAGGGGACGGTACAGAGGA 58.998 55.000 0.00 0.00 0.00 3.71
1215 1383 1.273986 GGGGCTTTAAGGGGACGGTA 61.274 60.000 0.00 0.00 0.00 4.02
1334 1532 0.251354 CACTGTAGGCAGGCACAGAT 59.749 55.000 23.98 11.71 46.62 2.90
1624 1830 1.741770 GTGGACGGTGTGGAGATGC 60.742 63.158 0.00 0.00 0.00 3.91
1728 1937 3.380479 AGAGGAAAACGTGATTGTCGA 57.620 42.857 0.00 0.00 0.00 4.20
1735 1947 4.037446 CCCAAAATCAAGAGGAAAACGTGA 59.963 41.667 0.00 0.00 0.00 4.35
1780 1995 2.281414 CACACCATGGACACGGCA 60.281 61.111 21.47 0.00 0.00 5.69
1822 2037 3.326889 CTTGCACATGAACCGCGGG 62.327 63.158 31.76 13.93 0.00 6.13
1890 2105 0.890996 CACCAGGACAAAGTCAGCCC 60.891 60.000 0.00 0.00 33.68 5.19
1893 2108 1.694150 TCTCCACCAGGACAAAGTCAG 59.306 52.381 0.00 0.00 39.61 3.51
1894 2109 1.801242 TCTCCACCAGGACAAAGTCA 58.199 50.000 0.00 0.00 39.61 3.41
1898 2113 0.770499 TGCATCTCCACCAGGACAAA 59.230 50.000 0.00 0.00 39.61 2.83
1900 2115 1.126948 TGTGCATCTCCACCAGGACA 61.127 55.000 0.00 0.00 39.61 4.02
1903 2118 0.253894 TCATGTGCATCTCCACCAGG 59.746 55.000 0.00 0.00 34.85 4.45
1912 2127 0.464013 AGCTGCTCCTCATGTGCATC 60.464 55.000 0.00 0.00 42.17 3.91
1976 2191 4.501714 GTACATCCGCGGCACCGA 62.502 66.667 23.51 2.08 42.83 4.69
2011 2226 2.123295 GCCCCATCACCCCCAATC 60.123 66.667 0.00 0.00 0.00 2.67
2013 2228 3.671410 CAGCCCCATCACCCCCAA 61.671 66.667 0.00 0.00 0.00 4.12
2020 2241 3.329889 AAGGACGCAGCCCCATCA 61.330 61.111 1.69 0.00 0.00 3.07
2039 2260 1.308069 CGGATGTGCAGGGGAACTTG 61.308 60.000 0.00 0.00 41.09 3.16
2096 2331 4.676109 TGGTTTGTTTCCCATCATCAGAT 58.324 39.130 0.00 0.00 33.87 2.90
2097 2332 4.111255 TGGTTTGTTTCCCATCATCAGA 57.889 40.909 0.00 0.00 0.00 3.27
2101 2341 2.905085 TGCATGGTTTGTTTCCCATCAT 59.095 40.909 0.00 0.00 39.44 2.45
2117 2357 0.527113 TGAACGGCCTTGAATGCATG 59.473 50.000 0.00 0.00 0.00 4.06
2131 2372 6.662414 TCTCCAAAATAGTAAGCATGAACG 57.338 37.500 0.00 0.00 0.00 3.95
2154 2403 9.077885 ACATCACACAAATAGTTTTAGTTGGAT 57.922 29.630 0.76 0.00 38.75 3.41
2211 2472 6.534634 ACATTAAAGTTCACTAGCTTGGACT 58.465 36.000 0.00 0.00 36.85 3.85
2212 2473 6.426937 TGACATTAAAGTTCACTAGCTTGGAC 59.573 38.462 0.00 0.00 0.00 4.02
2214 2475 6.801539 TGACATTAAAGTTCACTAGCTTGG 57.198 37.500 0.00 0.00 0.00 3.61
2216 2477 8.396272 ACAATGACATTAAAGTTCACTAGCTT 57.604 30.769 0.00 0.00 0.00 3.74
2243 2508 8.038944 GCATAATATCCTCCGATTTAAGTACCA 58.961 37.037 0.00 0.00 0.00 3.25
2295 2564 7.556275 GGAATGACATAACAATGGAAGAAGGTA 59.444 37.037 0.00 0.00 0.00 3.08
2297 2566 6.377996 TGGAATGACATAACAATGGAAGAAGG 59.622 38.462 0.00 0.00 0.00 3.46
2348 2641 6.817641 ACTCTTGACTTGAGATAGATTGCAAG 59.182 38.462 4.94 0.00 42.46 4.01
2400 2700 4.735578 GCATCACTTTAGTGGCATGGATTG 60.736 45.833 9.82 0.00 45.65 2.67
2401 2701 3.382546 GCATCACTTTAGTGGCATGGATT 59.617 43.478 9.82 0.00 45.65 3.01
2413 2713 3.616219 ACCCGCATTAAGCATCACTTTA 58.384 40.909 0.00 0.00 46.13 1.85
2418 2718 3.376859 CACTAAACCCGCATTAAGCATCA 59.623 43.478 0.00 0.00 46.13 3.07
2469 2769 8.601546 AGAGAAGAGTTAGGATTTTTCTCACAT 58.398 33.333 12.79 0.00 41.68 3.21
2517 2819 8.930846 AAAAATAAGCTAGATATCCTGCATGT 57.069 30.769 16.56 4.02 0.00 3.21
2540 2842 5.567430 GGCTTCTACCCTTTTCCTCTAAAA 58.433 41.667 0.00 0.00 35.74 1.52
2541 2843 5.175388 GGCTTCTACCCTTTTCCTCTAAA 57.825 43.478 0.00 0.00 0.00 1.85
2556 3581 3.075283 TGAAAATGGAACCAGGGCTTCTA 59.925 43.478 0.00 0.00 0.00 2.10
2557 3582 2.158325 TGAAAATGGAACCAGGGCTTCT 60.158 45.455 0.00 0.00 0.00 2.85
2558 3583 2.247358 TGAAAATGGAACCAGGGCTTC 58.753 47.619 0.00 1.06 0.00 3.86
2559 3584 2.397044 TGAAAATGGAACCAGGGCTT 57.603 45.000 0.00 0.00 0.00 4.35
2560 3585 2.629017 ATGAAAATGGAACCAGGGCT 57.371 45.000 0.00 0.00 0.00 5.19
2563 3588 7.232118 AGTTTTCTATGAAAATGGAACCAGG 57.768 36.000 8.43 0.00 0.00 4.45
2591 3616 8.910944 GGTGTTGTAATAAGACTATACTCTGGA 58.089 37.037 0.00 0.00 0.00 3.86
2592 3617 8.915036 AGGTGTTGTAATAAGACTATACTCTGG 58.085 37.037 0.00 0.00 0.00 3.86
2593 3618 9.737427 CAGGTGTTGTAATAAGACTATACTCTG 57.263 37.037 0.00 0.00 0.00 3.35
2595 3620 9.953697 CTCAGGTGTTGTAATAAGACTATACTC 57.046 37.037 0.00 0.00 0.00 2.59
2596 3621 8.915036 CCTCAGGTGTTGTAATAAGACTATACT 58.085 37.037 0.00 0.00 0.00 2.12
2598 3623 8.063153 TCCCTCAGGTGTTGTAATAAGACTATA 58.937 37.037 0.00 0.00 0.00 1.31
2600 3625 6.258354 TCCCTCAGGTGTTGTAATAAGACTA 58.742 40.000 0.00 0.00 0.00 2.59
2601 3626 5.091552 TCCCTCAGGTGTTGTAATAAGACT 58.908 41.667 0.00 0.00 0.00 3.24
2603 3628 4.469945 CCTCCCTCAGGTGTTGTAATAAGA 59.530 45.833 0.00 0.00 37.53 2.10
2605 3630 4.431378 TCCTCCCTCAGGTGTTGTAATAA 58.569 43.478 0.00 0.00 43.95 1.40
2606 3631 4.069312 TCCTCCCTCAGGTGTTGTAATA 57.931 45.455 0.00 0.00 43.95 0.98
2609 3634 2.642171 ATCCTCCCTCAGGTGTTGTA 57.358 50.000 0.00 0.00 43.95 2.41
2610 3635 1.747444 AATCCTCCCTCAGGTGTTGT 58.253 50.000 0.00 0.00 43.95 3.32
2613 3638 3.464828 ACATTAATCCTCCCTCAGGTGT 58.535 45.455 0.00 0.00 43.95 4.16
2615 3640 5.476983 TGATACATTAATCCTCCCTCAGGT 58.523 41.667 0.00 0.00 43.95 4.00
2617 3642 6.234177 GGTTGATACATTAATCCTCCCTCAG 58.766 44.000 0.00 0.00 0.00 3.35
2618 3643 5.073144 GGGTTGATACATTAATCCTCCCTCA 59.927 44.000 0.00 0.00 36.09 3.86
2620 3645 5.073691 CAGGGTTGATACATTAATCCTCCCT 59.926 44.000 0.00 8.96 43.11 4.20
2621 3646 5.316987 CAGGGTTGATACATTAATCCTCCC 58.683 45.833 0.00 0.00 34.96 4.30
2622 3647 5.316987 CCAGGGTTGATACATTAATCCTCC 58.683 45.833 0.00 0.00 34.96 4.30
2623 3648 4.762251 GCCAGGGTTGATACATTAATCCTC 59.238 45.833 0.00 0.00 34.96 3.71
2624 3649 4.167892 TGCCAGGGTTGATACATTAATCCT 59.832 41.667 0.00 0.00 37.36 3.24
2625 3650 4.278419 GTGCCAGGGTTGATACATTAATCC 59.722 45.833 0.00 0.00 0.00 3.01
2626 3651 4.887071 TGTGCCAGGGTTGATACATTAATC 59.113 41.667 0.00 0.00 0.00 1.75
2627 3652 4.865905 TGTGCCAGGGTTGATACATTAAT 58.134 39.130 0.00 0.00 0.00 1.40
2628 3653 4.308526 TGTGCCAGGGTTGATACATTAA 57.691 40.909 0.00 0.00 0.00 1.40
2631 3656 2.897271 TTGTGCCAGGGTTGATACAT 57.103 45.000 0.00 0.00 0.00 2.29
2632 3657 2.620367 GGATTGTGCCAGGGTTGATACA 60.620 50.000 0.00 0.00 0.00 2.29
2633 3658 2.024414 GGATTGTGCCAGGGTTGATAC 58.976 52.381 0.00 0.00 0.00 2.24
2634 3659 1.922447 AGGATTGTGCCAGGGTTGATA 59.078 47.619 0.00 0.00 0.00 2.15
2635 3660 0.706433 AGGATTGTGCCAGGGTTGAT 59.294 50.000 0.00 0.00 0.00 2.57
2637 3662 2.214376 TTAGGATTGTGCCAGGGTTG 57.786 50.000 0.00 0.00 0.00 3.77
2638 3663 2.990740 TTTAGGATTGTGCCAGGGTT 57.009 45.000 0.00 0.00 0.00 4.11
2639 3664 2.624029 CCATTTAGGATTGTGCCAGGGT 60.624 50.000 0.00 0.00 41.22 4.34
2640 3665 2.034124 CCATTTAGGATTGTGCCAGGG 58.966 52.381 0.00 0.00 41.22 4.45
2641 3666 2.034124 CCCATTTAGGATTGTGCCAGG 58.966 52.381 0.00 0.00 41.22 4.45
2643 3668 3.464720 TTCCCATTTAGGATTGTGCCA 57.535 42.857 0.00 0.00 41.22 4.92
2644 3669 3.132824 CCTTTCCCATTTAGGATTGTGCC 59.867 47.826 0.00 0.00 41.22 5.01
2645 3670 4.023291 TCCTTTCCCATTTAGGATTGTGC 58.977 43.478 0.00 0.00 41.22 4.57
2648 3673 6.603940 TTGTTCCTTTCCCATTTAGGATTG 57.396 37.500 0.00 0.00 41.22 2.67
2649 3674 7.625498 TTTTGTTCCTTTCCCATTTAGGATT 57.375 32.000 0.00 0.00 41.22 3.01
2652 3677 6.826668 AGTTTTTGTTCCTTTCCCATTTAGG 58.173 36.000 0.00 0.00 37.03 2.69
2653 3678 9.825109 TTTAGTTTTTGTTCCTTTCCCATTTAG 57.175 29.630 0.00 0.00 0.00 1.85
2656 3681 9.119418 CATTTTAGTTTTTGTTCCTTTCCCATT 57.881 29.630 0.00 0.00 0.00 3.16
2657 3682 8.490311 TCATTTTAGTTTTTGTTCCTTTCCCAT 58.510 29.630 0.00 0.00 0.00 4.00
2658 3683 7.766738 GTCATTTTAGTTTTTGTTCCTTTCCCA 59.233 33.333 0.00 0.00 0.00 4.37
2659 3684 7.042992 CGTCATTTTAGTTTTTGTTCCTTTCCC 60.043 37.037 0.00 0.00 0.00 3.97
2660 3685 7.490079 ACGTCATTTTAGTTTTTGTTCCTTTCC 59.510 33.333 0.00 0.00 0.00 3.13
2661 3686 8.402326 ACGTCATTTTAGTTTTTGTTCCTTTC 57.598 30.769 0.00 0.00 0.00 2.62
2662 3687 8.030106 TGACGTCATTTTAGTTTTTGTTCCTTT 58.970 29.630 15.76 0.00 0.00 3.11
2663 3688 7.486870 GTGACGTCATTTTAGTTTTTGTTCCTT 59.513 33.333 23.12 0.00 0.00 3.36
2664 3689 6.970613 GTGACGTCATTTTAGTTTTTGTTCCT 59.029 34.615 23.12 0.00 0.00 3.36
2665 3690 6.075780 CGTGACGTCATTTTAGTTTTTGTTCC 60.076 38.462 23.12 1.07 0.00 3.62
2666 3691 6.075780 CCGTGACGTCATTTTAGTTTTTGTTC 60.076 38.462 23.12 1.47 0.00 3.18
2668 3693 5.267776 CCGTGACGTCATTTTAGTTTTTGT 58.732 37.500 23.12 0.00 0.00 2.83
2669 3694 4.673311 CCCGTGACGTCATTTTAGTTTTTG 59.327 41.667 23.12 0.54 0.00 2.44
2672 3697 3.731089 TCCCGTGACGTCATTTTAGTTT 58.269 40.909 23.12 0.00 0.00 2.66
2673 3698 3.323243 CTCCCGTGACGTCATTTTAGTT 58.677 45.455 23.12 0.00 0.00 2.24
2674 3699 2.353406 CCTCCCGTGACGTCATTTTAGT 60.353 50.000 23.12 0.00 0.00 2.24
2675 3700 2.268298 CCTCCCGTGACGTCATTTTAG 58.732 52.381 23.12 16.10 0.00 1.85
2676 3701 1.066716 CCCTCCCGTGACGTCATTTTA 60.067 52.381 23.12 7.44 0.00 1.52
2677 3702 0.321298 CCCTCCCGTGACGTCATTTT 60.321 55.000 23.12 0.00 0.00 1.82
2678 3703 1.295423 CCCTCCCGTGACGTCATTT 59.705 57.895 23.12 0.00 0.00 2.32
2679 3704 2.978824 CCCTCCCGTGACGTCATT 59.021 61.111 23.12 0.00 0.00 2.57
2680 3705 3.771160 GCCCTCCCGTGACGTCAT 61.771 66.667 23.12 0.00 0.00 3.06
2683 3708 4.309950 GTTGCCCTCCCGTGACGT 62.310 66.667 3.64 0.00 0.00 4.34
2684 3709 4.308458 TGTTGCCCTCCCGTGACG 62.308 66.667 0.00 0.00 0.00 4.35
2685 3710 2.668550 GTGTTGCCCTCCCGTGAC 60.669 66.667 0.00 0.00 0.00 3.67
2686 3711 2.847234 AGTGTTGCCCTCCCGTGA 60.847 61.111 0.00 0.00 0.00 4.35
2687 3712 2.358737 GAGTGTTGCCCTCCCGTG 60.359 66.667 0.00 0.00 0.00 4.94
2688 3713 2.147387 AAGAGTGTTGCCCTCCCGT 61.147 57.895 0.00 0.00 0.00 5.28
2689 3714 1.672356 CAAGAGTGTTGCCCTCCCG 60.672 63.158 0.00 0.00 0.00 5.14
2690 3715 1.303643 CCAAGAGTGTTGCCCTCCC 60.304 63.158 0.00 0.00 0.00 4.30
2691 3716 1.303643 CCCAAGAGTGTTGCCCTCC 60.304 63.158 0.00 0.00 0.00 4.30
2692 3717 1.303643 CCCCAAGAGTGTTGCCCTC 60.304 63.158 0.00 0.00 0.00 4.30
2693 3718 2.845345 CCCCCAAGAGTGTTGCCCT 61.845 63.158 0.00 0.00 0.00 5.19
2694 3719 2.283173 CCCCCAAGAGTGTTGCCC 60.283 66.667 0.00 0.00 0.00 5.36
2708 3733 3.233953 AAAAAGTGGTTGGTCCCCC 57.766 52.632 0.00 0.00 34.77 5.40
2723 3748 5.106317 GGCTCAATACATCCTTGTCGAAAAA 60.106 40.000 0.00 0.00 37.28 1.94
2724 3749 4.394920 GGCTCAATACATCCTTGTCGAAAA 59.605 41.667 0.00 0.00 37.28 2.29
2725 3750 3.938963 GGCTCAATACATCCTTGTCGAAA 59.061 43.478 0.00 0.00 37.28 3.46
2726 3751 3.197766 AGGCTCAATACATCCTTGTCGAA 59.802 43.478 0.00 0.00 37.28 3.71
2727 3752 2.766263 AGGCTCAATACATCCTTGTCGA 59.234 45.455 0.00 0.00 37.28 4.20
2728 3753 3.185246 AGGCTCAATACATCCTTGTCG 57.815 47.619 0.00 0.00 37.28 4.35
2729 3754 5.294552 GTGTTAGGCTCAATACATCCTTGTC 59.705 44.000 0.00 0.00 37.28 3.18
2731 3756 5.295292 CAGTGTTAGGCTCAATACATCCTTG 59.705 44.000 0.00 0.00 0.00 3.61
2732 3757 5.431765 CAGTGTTAGGCTCAATACATCCTT 58.568 41.667 0.00 0.00 0.00 3.36
2733 3758 4.141620 CCAGTGTTAGGCTCAATACATCCT 60.142 45.833 0.00 0.00 0.00 3.24
2734 3759 4.130118 CCAGTGTTAGGCTCAATACATCC 58.870 47.826 0.00 0.00 0.00 3.51
2735 3760 4.130118 CCCAGTGTTAGGCTCAATACATC 58.870 47.826 0.00 0.00 0.00 3.06
2736 3761 3.117888 CCCCAGTGTTAGGCTCAATACAT 60.118 47.826 0.00 0.00 0.00 2.29
2738 3763 2.421529 CCCCCAGTGTTAGGCTCAATAC 60.422 54.545 0.00 0.00 0.00 1.89
2739 3764 1.843851 CCCCCAGTGTTAGGCTCAATA 59.156 52.381 0.00 0.00 0.00 1.90
2741 3766 2.074967 CCCCCAGTGTTAGGCTCAA 58.925 57.895 0.00 0.00 0.00 3.02
2743 3768 2.272471 GCCCCCAGTGTTAGGCTC 59.728 66.667 7.80 0.00 42.34 4.70
2744 3769 3.339093 GGCCCCCAGTGTTAGGCT 61.339 66.667 13.24 0.00 45.07 4.58
2745 3770 4.442454 GGGCCCCCAGTGTTAGGC 62.442 72.222 12.23 6.74 44.99 3.93
2746 3771 2.938798 TGGGCCCCCAGTGTTAGG 60.939 66.667 22.27 0.00 41.89 2.69
2755 3780 3.562250 GGCATATTTTGGGCCCCC 58.438 61.111 22.27 6.49 41.90 5.40
2759 3784 5.056480 GGTCTAAATTGGCATATTTTGGGC 58.944 41.667 11.13 5.60 0.00 5.36
2760 3785 6.232581 TGGTCTAAATTGGCATATTTTGGG 57.767 37.500 11.13 5.32 0.00 4.12
2761 3786 5.754890 GCTGGTCTAAATTGGCATATTTTGG 59.245 40.000 11.13 4.71 0.00 3.28
2762 3787 6.339730 TGCTGGTCTAAATTGGCATATTTTG 58.660 36.000 11.13 9.90 0.00 2.44
2764 3789 6.070881 TGTTGCTGGTCTAAATTGGCATATTT 60.071 34.615 10.81 10.81 0.00 1.40
2765 3790 5.421693 TGTTGCTGGTCTAAATTGGCATATT 59.578 36.000 0.00 0.00 0.00 1.28
2766 3791 4.955450 TGTTGCTGGTCTAAATTGGCATAT 59.045 37.500 0.00 0.00 0.00 1.78
2768 3793 3.164268 TGTTGCTGGTCTAAATTGGCAT 58.836 40.909 0.00 0.00 0.00 4.40
2769 3794 2.557924 CTGTTGCTGGTCTAAATTGGCA 59.442 45.455 0.00 0.00 0.00 4.92
2770 3795 2.672195 GCTGTTGCTGGTCTAAATTGGC 60.672 50.000 0.00 0.00 36.03 4.52
2771 3796 2.557924 TGCTGTTGCTGGTCTAAATTGG 59.442 45.455 0.00 0.00 40.48 3.16
2773 3798 2.229784 GCTGCTGTTGCTGGTCTAAATT 59.770 45.455 0.00 0.00 40.48 1.82
2774 3799 1.815003 GCTGCTGTTGCTGGTCTAAAT 59.185 47.619 0.00 0.00 40.48 1.40
2775 3800 1.238439 GCTGCTGTTGCTGGTCTAAA 58.762 50.000 0.00 0.00 40.48 1.85
2776 3801 0.108396 TGCTGCTGTTGCTGGTCTAA 59.892 50.000 0.00 0.00 40.48 2.10
2778 3803 1.895707 GTGCTGCTGTTGCTGGTCT 60.896 57.895 0.00 0.00 40.48 3.85
2779 3804 2.641559 GTGCTGCTGTTGCTGGTC 59.358 61.111 0.00 0.00 40.48 4.02
2780 3805 2.908940 GGTGCTGCTGTTGCTGGT 60.909 61.111 0.00 0.00 40.48 4.00
2781 3806 2.018727 TTTGGTGCTGCTGTTGCTGG 62.019 55.000 0.00 0.00 40.48 4.85
2782 3807 0.872881 GTTTGGTGCTGCTGTTGCTG 60.873 55.000 0.00 0.00 40.48 4.41
2783 3808 1.438814 GTTTGGTGCTGCTGTTGCT 59.561 52.632 0.00 0.00 40.48 3.91
2786 3811 0.675633 GATGGTTTGGTGCTGCTGTT 59.324 50.000 0.00 0.00 0.00 3.16
2787 3812 0.178981 AGATGGTTTGGTGCTGCTGT 60.179 50.000 0.00 0.00 0.00 4.40
2788 3813 0.963962 AAGATGGTTTGGTGCTGCTG 59.036 50.000 0.00 0.00 0.00 4.41
2791 3816 3.087031 AGATGAAGATGGTTTGGTGCTG 58.913 45.455 0.00 0.00 0.00 4.41
2792 3817 3.446442 AGATGAAGATGGTTTGGTGCT 57.554 42.857 0.00 0.00 0.00 4.40
2793 3818 3.119352 GGAAGATGAAGATGGTTTGGTGC 60.119 47.826 0.00 0.00 0.00 5.01
2794 3819 3.445096 GGGAAGATGAAGATGGTTTGGTG 59.555 47.826 0.00 0.00 0.00 4.17
2795 3820 3.075882 TGGGAAGATGAAGATGGTTTGGT 59.924 43.478 0.00 0.00 0.00 3.67
2798 3823 3.359950 GCTGGGAAGATGAAGATGGTTT 58.640 45.455 0.00 0.00 0.00 3.27
2799 3824 2.357569 GGCTGGGAAGATGAAGATGGTT 60.358 50.000 0.00 0.00 0.00 3.67
2801 3826 1.478288 GGGCTGGGAAGATGAAGATGG 60.478 57.143 0.00 0.00 0.00 3.51
2802 3827 1.478288 GGGGCTGGGAAGATGAAGATG 60.478 57.143 0.00 0.00 0.00 2.90
2804 3829 1.626356 CGGGGCTGGGAAGATGAAGA 61.626 60.000 0.00 0.00 0.00 2.87
2805 3830 1.153086 CGGGGCTGGGAAGATGAAG 60.153 63.158 0.00 0.00 0.00 3.02
2806 3831 2.998097 CGGGGCTGGGAAGATGAA 59.002 61.111 0.00 0.00 0.00 2.57
2807 3832 3.797353 GCGGGGCTGGGAAGATGA 61.797 66.667 0.00 0.00 0.00 2.92
2822 3847 4.093952 CAAGGTGAAGCTGGCGCG 62.094 66.667 0.00 0.00 42.32 6.86
2823 3848 1.671054 TACAAGGTGAAGCTGGCGC 60.671 57.895 0.00 0.00 0.00 6.53
2824 3849 0.320771 AGTACAAGGTGAAGCTGGCG 60.321 55.000 0.00 0.00 0.00 5.69
2827 3852 3.686726 GGATGAAGTACAAGGTGAAGCTG 59.313 47.826 0.00 0.00 0.00 4.24
2828 3853 3.327757 TGGATGAAGTACAAGGTGAAGCT 59.672 43.478 0.00 0.00 0.00 3.74
2829 3854 3.437049 GTGGATGAAGTACAAGGTGAAGC 59.563 47.826 0.00 0.00 0.00 3.86
2830 3855 4.641396 TGTGGATGAAGTACAAGGTGAAG 58.359 43.478 0.00 0.00 0.00 3.02
2831 3856 4.698201 TGTGGATGAAGTACAAGGTGAA 57.302 40.909 0.00 0.00 0.00 3.18
2832 3857 4.698201 TTGTGGATGAAGTACAAGGTGA 57.302 40.909 0.00 0.00 31.34 4.02
2834 3859 5.010282 GGAATTGTGGATGAAGTACAAGGT 58.990 41.667 0.00 0.00 37.69 3.50
2835 3860 5.124457 CAGGAATTGTGGATGAAGTACAAGG 59.876 44.000 0.00 0.00 37.69 3.61
2836 3861 5.392380 GCAGGAATTGTGGATGAAGTACAAG 60.392 44.000 0.00 0.00 37.69 3.16
2837 3862 4.458989 GCAGGAATTGTGGATGAAGTACAA 59.541 41.667 0.00 0.00 38.52 2.41
2838 3863 4.009675 GCAGGAATTGTGGATGAAGTACA 58.990 43.478 0.00 0.00 0.00 2.90
2839 3864 3.378427 GGCAGGAATTGTGGATGAAGTAC 59.622 47.826 0.00 0.00 0.00 2.73
2841 3866 2.042162 AGGCAGGAATTGTGGATGAAGT 59.958 45.455 0.00 0.00 0.00 3.01
2842 3867 2.731572 AGGCAGGAATTGTGGATGAAG 58.268 47.619 0.00 0.00 0.00 3.02
2844 3869 2.905415 AAGGCAGGAATTGTGGATGA 57.095 45.000 0.00 0.00 0.00 2.92
2845 3870 4.209538 TGATAAGGCAGGAATTGTGGATG 58.790 43.478 0.00 0.00 0.00 3.51
2846 3871 4.467769 CTGATAAGGCAGGAATTGTGGAT 58.532 43.478 0.00 0.00 32.26 3.41
2848 3873 2.360165 GCTGATAAGGCAGGAATTGTGG 59.640 50.000 0.00 0.00 36.41 4.17
2849 3874 2.360165 GGCTGATAAGGCAGGAATTGTG 59.640 50.000 0.00 0.00 36.41 3.33
2850 3875 2.243221 AGGCTGATAAGGCAGGAATTGT 59.757 45.455 6.38 0.00 36.41 2.71
2851 3876 2.621998 CAGGCTGATAAGGCAGGAATTG 59.378 50.000 9.42 0.00 36.41 2.32
2852 3877 2.423947 CCAGGCTGATAAGGCAGGAATT 60.424 50.000 17.94 0.00 42.29 2.17
2853 3878 1.144503 CCAGGCTGATAAGGCAGGAAT 59.855 52.381 17.94 0.00 42.29 3.01
2854 3879 0.548031 CCAGGCTGATAAGGCAGGAA 59.452 55.000 17.94 0.00 42.29 3.36
2855 3880 1.987807 GCCAGGCTGATAAGGCAGGA 61.988 60.000 18.50 0.00 46.26 3.86
2856 3881 1.527844 GCCAGGCTGATAAGGCAGG 60.528 63.158 17.94 10.59 46.26 4.85
2857 3882 4.154296 GCCAGGCTGATAAGGCAG 57.846 61.111 17.94 0.00 46.26 4.85
2861 3886 3.702147 CCAGAGCCAGGCTGATAAG 57.298 57.895 22.26 3.34 39.88 1.73
2873 3898 1.020437 GCTGATACTTTGGCCAGAGC 58.980 55.000 22.75 7.75 38.76 4.09
2874 3899 2.093288 TCTGCTGATACTTTGGCCAGAG 60.093 50.000 21.34 21.34 0.00 3.35
2875 3900 1.908619 TCTGCTGATACTTTGGCCAGA 59.091 47.619 5.11 0.00 0.00 3.86
2876 3901 2.286872 CTCTGCTGATACTTTGGCCAG 58.713 52.381 5.11 0.00 0.00 4.85
2877 3902 1.065199 CCTCTGCTGATACTTTGGCCA 60.065 52.381 0.00 0.00 0.00 5.36
2878 3903 1.210478 TCCTCTGCTGATACTTTGGCC 59.790 52.381 0.00 0.00 0.00 5.36
2879 3904 2.093235 AGTCCTCTGCTGATACTTTGGC 60.093 50.000 0.00 0.00 0.00 4.52
2880 3905 3.902881 AGTCCTCTGCTGATACTTTGG 57.097 47.619 0.00 0.00 0.00 3.28
2881 3906 5.083533 AGAAGTCCTCTGCTGATACTTTG 57.916 43.478 17.10 0.00 32.18 2.77
2882 3907 5.486526 CAAGAAGTCCTCTGCTGATACTTT 58.513 41.667 17.10 8.88 33.37 2.66
2883 3908 4.622695 GCAAGAAGTCCTCTGCTGATACTT 60.623 45.833 16.42 16.42 33.37 2.24
2884 3909 3.118811 GCAAGAAGTCCTCTGCTGATACT 60.119 47.826 0.00 0.00 33.37 2.12
2885 3910 3.194062 GCAAGAAGTCCTCTGCTGATAC 58.806 50.000 0.00 0.00 33.37 2.24
2886 3911 2.833943 TGCAAGAAGTCCTCTGCTGATA 59.166 45.455 0.00 0.00 33.37 2.15
2888 3913 1.001746 CTGCAAGAAGTCCTCTGCTGA 59.998 52.381 0.00 0.00 34.07 4.26
2889 3914 1.440708 CTGCAAGAAGTCCTCTGCTG 58.559 55.000 0.00 0.00 34.07 4.41
2891 3916 0.604780 TGCTGCAAGAAGTCCTCTGC 60.605 55.000 0.00 0.00 34.07 4.26
2892 3917 2.008329 GATGCTGCAAGAAGTCCTCTG 58.992 52.381 6.36 0.00 34.07 3.35
2893 3918 1.065564 GGATGCTGCAAGAAGTCCTCT 60.066 52.381 6.36 0.00 34.07 3.69
2894 3919 1.377536 GGATGCTGCAAGAAGTCCTC 58.622 55.000 6.36 0.00 34.07 3.71
2896 3921 0.322816 TGGGATGCTGCAAGAAGTCC 60.323 55.000 6.36 8.65 34.07 3.85
2897 3922 1.538047 TTGGGATGCTGCAAGAAGTC 58.462 50.000 6.36 0.00 34.07 3.01
2898 3923 1.999648 TTTGGGATGCTGCAAGAAGT 58.000 45.000 6.36 0.00 34.07 3.01
2899 3924 2.353406 CCTTTTGGGATGCTGCAAGAAG 60.353 50.000 6.36 0.80 37.23 2.85
2901 3926 1.203038 TCCTTTTGGGATGCTGCAAGA 60.203 47.619 6.36 0.00 39.58 3.02
2902 3927 1.259609 TCCTTTTGGGATGCTGCAAG 58.740 50.000 6.36 0.00 39.58 4.01
2903 3928 3.453916 TCCTTTTGGGATGCTGCAA 57.546 47.368 6.36 0.00 39.58 4.08
2924 4533 4.988598 AAGCGGTGGTGAGCGTGG 62.989 66.667 0.00 0.00 45.04 4.94
2925 4534 3.716006 CAAGCGGTGGTGAGCGTG 61.716 66.667 0.00 0.00 45.04 5.34
2927 4536 2.954753 GAACAAGCGGTGGTGAGCG 61.955 63.158 0.00 0.00 46.03 5.03
2928 4537 1.569479 GAGAACAAGCGGTGGTGAGC 61.569 60.000 0.00 0.00 0.00 4.26
2929 4538 0.034059 AGAGAACAAGCGGTGGTGAG 59.966 55.000 0.00 0.00 0.00 3.51
2931 4540 0.588252 CAAGAGAACAAGCGGTGGTG 59.412 55.000 0.00 0.00 0.00 4.17
2932 4541 0.180406 ACAAGAGAACAAGCGGTGGT 59.820 50.000 0.00 0.00 0.00 4.16
2933 4542 0.588252 CACAAGAGAACAAGCGGTGG 59.412 55.000 0.00 0.00 0.00 4.61
2934 4543 1.299541 ACACAAGAGAACAAGCGGTG 58.700 50.000 0.00 0.00 0.00 4.94
2935 4544 2.038387 AACACAAGAGAACAAGCGGT 57.962 45.000 0.00 0.00 0.00 5.68
2936 4545 2.287009 GGAAACACAAGAGAACAAGCGG 60.287 50.000 0.00 0.00 0.00 5.52
2937 4546 2.287009 GGGAAACACAAGAGAACAAGCG 60.287 50.000 0.00 0.00 0.00 4.68
2938 4547 2.687935 TGGGAAACACAAGAGAACAAGC 59.312 45.455 0.00 0.00 0.00 4.01
2950 4559 3.498082 GATTTATGTGCGTGGGAAACAC 58.502 45.455 0.00 0.00 46.78 3.32
2951 4560 2.490115 GGATTTATGTGCGTGGGAAACA 59.510 45.455 0.00 0.00 0.00 2.83
2952 4561 2.490115 TGGATTTATGTGCGTGGGAAAC 59.510 45.455 0.00 0.00 0.00 2.78
2953 4562 2.490115 GTGGATTTATGTGCGTGGGAAA 59.510 45.455 0.00 0.00 0.00 3.13
2955 4564 1.280710 AGTGGATTTATGTGCGTGGGA 59.719 47.619 0.00 0.00 0.00 4.37
2956 4565 1.750193 AGTGGATTTATGTGCGTGGG 58.250 50.000 0.00 0.00 0.00 4.61
2957 4566 3.309682 CACTAGTGGATTTATGTGCGTGG 59.690 47.826 15.49 0.00 0.00 4.94
2958 4567 4.032900 GTCACTAGTGGATTTATGTGCGTG 59.967 45.833 22.48 0.00 0.00 5.34
2959 4568 4.181578 GTCACTAGTGGATTTATGTGCGT 58.818 43.478 22.48 0.00 0.00 5.24
2960 4569 4.180817 TGTCACTAGTGGATTTATGTGCG 58.819 43.478 22.48 0.00 0.00 5.34
2961 4570 6.494893 TTTGTCACTAGTGGATTTATGTGC 57.505 37.500 22.48 2.10 0.00 4.57
2963 4572 6.942576 AGCTTTTGTCACTAGTGGATTTATGT 59.057 34.615 22.48 0.33 0.00 2.29
2964 4573 7.383102 AGCTTTTGTCACTAGTGGATTTATG 57.617 36.000 22.48 9.08 0.00 1.90
2965 4574 8.947115 GTAAGCTTTTGTCACTAGTGGATTTAT 58.053 33.333 22.48 4.48 0.00 1.40
2966 4575 7.934665 TGTAAGCTTTTGTCACTAGTGGATTTA 59.065 33.333 22.48 0.00 0.00 1.40
2969 4578 5.865085 TGTAAGCTTTTGTCACTAGTGGAT 58.135 37.500 22.48 1.15 0.00 3.41
2971 4580 6.560253 ATTGTAAGCTTTTGTCACTAGTGG 57.440 37.500 22.48 6.61 0.00 4.00
2972 4581 8.856490 AAAATTGTAAGCTTTTGTCACTAGTG 57.144 30.769 17.17 17.17 0.00 2.74
2974 4583 9.736023 AGAAAAATTGTAAGCTTTTGTCACTAG 57.264 29.630 3.20 0.00 0.00 2.57
2975 4584 9.515020 CAGAAAAATTGTAAGCTTTTGTCACTA 57.485 29.630 3.20 0.00 0.00 2.74
2976 4585 8.250332 TCAGAAAAATTGTAAGCTTTTGTCACT 58.750 29.630 3.20 0.00 0.00 3.41
2977 4586 8.406172 TCAGAAAAATTGTAAGCTTTTGTCAC 57.594 30.769 3.20 0.00 0.00 3.67
2978 4587 7.706179 CCTCAGAAAAATTGTAAGCTTTTGTCA 59.294 33.333 3.20 0.00 0.00 3.58
2979 4588 7.920682 TCCTCAGAAAAATTGTAAGCTTTTGTC 59.079 33.333 3.20 0.00 0.00 3.18
2980 4589 7.781056 TCCTCAGAAAAATTGTAAGCTTTTGT 58.219 30.769 3.20 0.00 0.00 2.83
2981 4590 8.822652 ATCCTCAGAAAAATTGTAAGCTTTTG 57.177 30.769 3.20 0.00 0.00 2.44
2982 4591 8.641541 TGATCCTCAGAAAAATTGTAAGCTTTT 58.358 29.630 3.20 0.00 0.00 2.27
2983 4592 8.084684 GTGATCCTCAGAAAAATTGTAAGCTTT 58.915 33.333 3.20 0.00 0.00 3.51
2984 4593 7.309438 GGTGATCCTCAGAAAAATTGTAAGCTT 60.309 37.037 3.48 3.48 0.00 3.74
2985 4594 6.151817 GGTGATCCTCAGAAAAATTGTAAGCT 59.848 38.462 0.00 0.00 0.00 3.74
2986 4595 6.151817 AGGTGATCCTCAGAAAAATTGTAAGC 59.848 38.462 0.00 0.00 40.58 3.09
2987 4596 7.175641 ACAGGTGATCCTCAGAAAAATTGTAAG 59.824 37.037 0.00 0.00 43.07 2.34
2988 4597 7.004086 ACAGGTGATCCTCAGAAAAATTGTAA 58.996 34.615 0.00 0.00 43.07 2.41
2989 4598 6.542821 ACAGGTGATCCTCAGAAAAATTGTA 58.457 36.000 0.00 0.00 43.07 2.41
2990 4599 5.388654 ACAGGTGATCCTCAGAAAAATTGT 58.611 37.500 0.00 0.00 43.07 2.71
2991 4600 5.972107 ACAGGTGATCCTCAGAAAAATTG 57.028 39.130 0.00 0.00 43.07 2.32
2992 4601 7.039714 GGTTTACAGGTGATCCTCAGAAAAATT 60.040 37.037 0.00 0.00 43.07 1.82
2995 4604 5.163141 TGGTTTACAGGTGATCCTCAGAAAA 60.163 40.000 0.00 0.00 43.07 2.29
2997 4606 3.907474 TGGTTTACAGGTGATCCTCAGAA 59.093 43.478 0.00 0.00 43.07 3.02
2998 4607 3.516586 TGGTTTACAGGTGATCCTCAGA 58.483 45.455 0.00 0.00 43.07 3.27
3000 4609 3.650942 ACTTGGTTTACAGGTGATCCTCA 59.349 43.478 0.00 0.00 43.07 3.86
3001 4610 4.254492 GACTTGGTTTACAGGTGATCCTC 58.746 47.826 0.00 0.00 43.07 3.71
3003 4612 4.015872 TGACTTGGTTTACAGGTGATCC 57.984 45.455 0.00 0.00 39.80 3.36
3004 4613 5.063880 ACTTGACTTGGTTTACAGGTGATC 58.936 41.667 0.00 0.00 39.80 2.92
3005 4614 5.048846 ACTTGACTTGGTTTACAGGTGAT 57.951 39.130 0.00 0.00 39.80 3.06
3009 4618 6.095720 TGGTAAAACTTGACTTGGTTTACAGG 59.904 38.462 13.87 0.00 35.02 4.00
3011 4620 7.648039 ATGGTAAAACTTGACTTGGTTTACA 57.352 32.000 13.87 4.01 35.02 2.41
3014 4623 9.945904 TTTTAATGGTAAAACTTGACTTGGTTT 57.054 25.926 0.00 0.00 34.87 3.27
3030 4639 8.629158 GCAGGAATGATATGTGTTTTAATGGTA 58.371 33.333 0.00 0.00 0.00 3.25
3031 4640 7.123997 TGCAGGAATGATATGTGTTTTAATGGT 59.876 33.333 0.00 0.00 0.00 3.55
3032 4641 7.490840 TGCAGGAATGATATGTGTTTTAATGG 58.509 34.615 0.00 0.00 0.00 3.16
3033 4642 9.537192 AATGCAGGAATGATATGTGTTTTAATG 57.463 29.630 0.00 0.00 0.00 1.90
3035 4644 9.585099 GAAATGCAGGAATGATATGTGTTTTAA 57.415 29.630 0.00 0.00 0.00 1.52
3037 4646 7.844009 AGAAATGCAGGAATGATATGTGTTTT 58.156 30.769 0.00 0.00 0.00 2.43
3038 4647 7.414222 AGAAATGCAGGAATGATATGTGTTT 57.586 32.000 0.00 0.00 0.00 2.83
3039 4648 7.994911 TCTAGAAATGCAGGAATGATATGTGTT 59.005 33.333 0.00 0.00 0.00 3.32
3040 4649 7.512130 TCTAGAAATGCAGGAATGATATGTGT 58.488 34.615 0.00 0.00 0.00 3.72
3042 4651 9.887629 CTATCTAGAAATGCAGGAATGATATGT 57.112 33.333 0.00 0.00 0.00 2.29
3043 4652 8.828644 GCTATCTAGAAATGCAGGAATGATATG 58.171 37.037 0.00 0.00 0.00 1.78
3045 4654 7.334090 GGCTATCTAGAAATGCAGGAATGATA 58.666 38.462 14.12 0.00 0.00 2.15
3047 4656 5.513788 GGGCTATCTAGAAATGCAGGAATGA 60.514 44.000 14.12 0.00 0.00 2.57
3048 4657 4.699257 GGGCTATCTAGAAATGCAGGAATG 59.301 45.833 14.12 0.00 0.00 2.67
3049 4658 4.352001 TGGGCTATCTAGAAATGCAGGAAT 59.648 41.667 14.12 0.00 0.00 3.01
3050 4659 3.716353 TGGGCTATCTAGAAATGCAGGAA 59.284 43.478 14.12 0.00 0.00 3.36
3051 4660 3.317406 TGGGCTATCTAGAAATGCAGGA 58.683 45.455 14.12 0.00 0.00 3.86
3053 4662 4.282957 TCTCTGGGCTATCTAGAAATGCAG 59.717 45.833 14.12 6.64 32.44 4.41
3054 4663 4.226384 TCTCTGGGCTATCTAGAAATGCA 58.774 43.478 14.12 0.00 32.44 3.96
3055 4664 4.283212 ACTCTCTGGGCTATCTAGAAATGC 59.717 45.833 0.00 1.34 32.44 3.56
3056 4665 5.279406 CCACTCTCTGGGCTATCTAGAAATG 60.279 48.000 0.00 0.00 36.18 2.32
3057 4666 4.837860 CCACTCTCTGGGCTATCTAGAAAT 59.162 45.833 0.00 0.00 36.18 2.17
3058 4667 4.219115 CCACTCTCTGGGCTATCTAGAAA 58.781 47.826 0.00 0.00 36.18 2.52
3059 4668 3.838565 CCACTCTCTGGGCTATCTAGAA 58.161 50.000 0.00 0.00 36.18 2.10
3060 4669 2.489985 GCCACTCTCTGGGCTATCTAGA 60.490 54.545 0.00 0.00 46.74 2.43
3061 4670 1.892474 GCCACTCTCTGGGCTATCTAG 59.108 57.143 0.00 0.00 46.74 2.43
3062 4671 2.002505 GCCACTCTCTGGGCTATCTA 57.997 55.000 0.00 0.00 46.74 1.98
3070 4679 0.035725 TCAATGCTGCCACTCTCTGG 60.036 55.000 0.00 0.00 44.08 3.86
3071 4680 1.941294 GATCAATGCTGCCACTCTCTG 59.059 52.381 0.00 0.00 0.00 3.35
3072 4681 1.558294 TGATCAATGCTGCCACTCTCT 59.442 47.619 0.00 0.00 0.00 3.10
3073 4682 2.034104 TGATCAATGCTGCCACTCTC 57.966 50.000 0.00 0.00 0.00 3.20
3075 4684 2.089980 ACTTGATCAATGCTGCCACTC 58.910 47.619 8.96 0.00 0.00 3.51
3076 4685 2.211250 ACTTGATCAATGCTGCCACT 57.789 45.000 8.96 0.00 0.00 4.00
3077 4686 4.439305 TTAACTTGATCAATGCTGCCAC 57.561 40.909 8.96 0.00 0.00 5.01
3078 4687 6.964807 ATATTAACTTGATCAATGCTGCCA 57.035 33.333 8.96 0.00 0.00 4.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.