Multiple sequence alignment - TraesCS3B01G029300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G029300 chr3B 100.000 2648 0 0 1 2648 13414870 13417517 0.000000e+00 4891.0
1 TraesCS3B01G029300 chr3B 85.735 2110 224 53 37 2113 12935394 12937459 0.000000e+00 2158.0
2 TraesCS3B01G029300 chr3B 84.025 1590 189 36 129 1696 12840966 12839420 0.000000e+00 1469.0
3 TraesCS3B01G029300 chr3B 81.823 1843 241 51 37 1847 13248060 13249840 0.000000e+00 1461.0
4 TraesCS3B01G029300 chr3B 82.582 488 58 13 129 607 12474600 12475069 3.170000e-109 405.0
5 TraesCS3B01G029300 chr3B 89.524 105 11 0 1743 1847 12476260 12476364 1.650000e-27 134.0
6 TraesCS3B01G029300 chr3B 95.833 48 1 1 2112 2158 12937479 12937526 2.830000e-10 76.8
7 TraesCS3B01G029300 chr3D 95.093 1997 86 7 1 1990 5408176 5406185 0.000000e+00 3134.0
8 TraesCS3B01G029300 chr3D 86.070 1565 187 20 154 1701 5374465 5372915 0.000000e+00 1653.0
9 TraesCS3B01G029300 chr3D 84.151 1590 196 32 124 1696 41424901 41423351 0.000000e+00 1489.0
10 TraesCS3B01G029300 chr3D 82.466 1768 219 47 129 1847 41594615 41592890 0.000000e+00 1463.0
11 TraesCS3B01G029300 chr3D 92.089 493 38 1 2156 2648 363797822 363797331 0.000000e+00 693.0
12 TraesCS3B01G029300 chr3D 95.833 120 4 1 1995 2113 5406146 5406027 2.690000e-45 193.0
13 TraesCS3B01G029300 chr3D 94.595 74 4 0 1758 1831 41423000 41422927 5.990000e-22 115.0
14 TraesCS3B01G029300 chr3D 95.745 47 2 0 2112 2158 5406007 5405961 2.830000e-10 76.8
15 TraesCS3B01G029300 chr3A 87.506 2113 184 49 37 2113 16011199 16013267 0.000000e+00 2366.0
16 TraesCS3B01G029300 chr3A 87.020 1564 173 20 154 1701 17333524 17335073 0.000000e+00 1736.0
17 TraesCS3B01G029300 chr3A 86.233 1569 188 16 154 1708 16232558 16231004 0.000000e+00 1676.0
18 TraesCS3B01G029300 chr3A 86.079 1566 185 22 154 1701 17377801 17376251 0.000000e+00 1653.0
19 TraesCS3B01G029300 chr3A 83.891 1583 200 30 129 1696 15837771 15839313 0.000000e+00 1459.0
20 TraesCS3B01G029300 chr3A 92.443 397 19 8 1559 1948 16321344 16321736 8.280000e-155 556.0
21 TraesCS3B01G029300 chr3A 87.151 179 10 2 1943 2108 16334935 16335113 9.670000e-45 191.0
22 TraesCS3B01G029300 chr3A 95.745 47 1 1 2112 2157 16013288 16013334 1.020000e-09 75.0
23 TraesCS3B01G029300 chr2B 94.726 493 26 0 2156 2648 440358951 440359443 0.000000e+00 767.0
24 TraesCS3B01G029300 chr4A 92.292 493 37 1 2156 2648 532202747 532203238 0.000000e+00 699.0
25 TraesCS3B01G029300 chr1D 91.886 493 40 0 2156 2648 383688636 383689128 0.000000e+00 689.0
26 TraesCS3B01G029300 chr1D 91.684 493 41 0 2156 2648 368323817 368324309 0.000000e+00 684.0
27 TraesCS3B01G029300 chr7A 91.684 493 41 0 2156 2648 569410390 569409898 0.000000e+00 684.0
28 TraesCS3B01G029300 chr2D 91.684 493 41 0 2156 2648 516932281 516932773 0.000000e+00 684.0
29 TraesCS3B01G029300 chr4D 91.278 493 42 1 2156 2648 485018458 485018949 0.000000e+00 671.0
30 TraesCS3B01G029300 chr2A 90.872 493 45 0 2156 2648 44792048 44792540 0.000000e+00 662.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G029300 chr3B 13414870 13417517 2647 False 4891.0 4891 100.0000 1 2648 1 chr3B.!!$F2 2647
1 TraesCS3B01G029300 chr3B 12839420 12840966 1546 True 1469.0 1469 84.0250 129 1696 1 chr3B.!!$R1 1567
2 TraesCS3B01G029300 chr3B 13248060 13249840 1780 False 1461.0 1461 81.8230 37 1847 1 chr3B.!!$F1 1810
3 TraesCS3B01G029300 chr3B 12935394 12937526 2132 False 1117.4 2158 90.7840 37 2158 2 chr3B.!!$F4 2121
4 TraesCS3B01G029300 chr3B 12474600 12476364 1764 False 269.5 405 86.0530 129 1847 2 chr3B.!!$F3 1718
5 TraesCS3B01G029300 chr3D 5372915 5374465 1550 True 1653.0 1653 86.0700 154 1701 1 chr3D.!!$R1 1547
6 TraesCS3B01G029300 chr3D 41592890 41594615 1725 True 1463.0 1463 82.4660 129 1847 1 chr3D.!!$R2 1718
7 TraesCS3B01G029300 chr3D 5405961 5408176 2215 True 1134.6 3134 95.5570 1 2158 3 chr3D.!!$R4 2157
8 TraesCS3B01G029300 chr3D 41422927 41424901 1974 True 802.0 1489 89.3730 124 1831 2 chr3D.!!$R5 1707
9 TraesCS3B01G029300 chr3A 17333524 17335073 1549 False 1736.0 1736 87.0200 154 1701 1 chr3A.!!$F4 1547
10 TraesCS3B01G029300 chr3A 16231004 16232558 1554 True 1676.0 1676 86.2330 154 1708 1 chr3A.!!$R1 1554
11 TraesCS3B01G029300 chr3A 17376251 17377801 1550 True 1653.0 1653 86.0790 154 1701 1 chr3A.!!$R2 1547
12 TraesCS3B01G029300 chr3A 15837771 15839313 1542 False 1459.0 1459 83.8910 129 1696 1 chr3A.!!$F1 1567
13 TraesCS3B01G029300 chr3A 16011199 16013334 2135 False 1220.5 2366 91.6255 37 2157 2 chr3A.!!$F5 2120

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
70 71 1.337387 GGGGACTACTTCGGATTCTCG 59.663 57.143 0.00 0.0 0.0 4.04 F
396 408 1.673993 CGGTGGTGCTGCAATGGTA 60.674 57.895 2.77 0.0 0.0 3.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1015 1057 0.033796 CTTGCTCCCACCATCACCAT 60.034 55.0 0.0 0.0 0.00 3.55 R
2200 2592 0.036875 CTGGAAATCTATCCGCCCCC 59.963 60.0 0.0 0.0 42.76 5.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 7.285401 ACAAACAATGAAGTATGAGGACTTTGT 59.715 33.333 0.00 0.00 39.79 2.83
32 33 8.783093 CAATGAAGTATGAGGACTTTGTTGTAA 58.217 33.333 0.00 0.00 39.79 2.41
33 34 8.918202 ATGAAGTATGAGGACTTTGTTGTAAA 57.082 30.769 0.00 0.00 39.79 2.01
34 35 8.740123 TGAAGTATGAGGACTTTGTTGTAAAA 57.260 30.769 0.00 0.00 39.79 1.52
35 36 8.836413 TGAAGTATGAGGACTTTGTTGTAAAAG 58.164 33.333 0.00 0.00 39.79 2.27
70 71 1.337387 GGGGACTACTTCGGATTCTCG 59.663 57.143 0.00 0.00 0.00 4.04
396 408 1.673993 CGGTGGTGCTGCAATGGTA 60.674 57.895 2.77 0.00 0.00 3.25
491 509 1.725641 TGCTGCGACGAATCATTCTT 58.274 45.000 0.00 0.00 0.00 2.52
607 629 5.824429 TGATGACGAACGGTAGGTAATTAG 58.176 41.667 0.00 0.00 0.00 1.73
615 637 6.471233 AACGGTAGGTAATTAGGGTTAGAC 57.529 41.667 0.00 0.00 0.00 2.59
649 671 2.758736 TTGCACAATATGGTTTGCCC 57.241 45.000 0.00 0.00 33.86 5.36
662 685 1.818674 GTTTGCCCATCGTTGGAATCT 59.181 47.619 14.27 0.00 46.92 2.40
663 686 1.750193 TTGCCCATCGTTGGAATCTC 58.250 50.000 14.27 0.00 46.92 2.75
669 692 3.012518 CCATCGTTGGAATCTCTTTGCT 58.987 45.455 6.68 0.00 46.92 3.91
824 861 6.507023 TCTTCTCTTTTTCAAGGAAATGCAC 58.493 36.000 0.00 0.00 31.34 4.57
871 908 3.800604 GCCAAAACGGTGCAAAAGGAATA 60.801 43.478 0.00 0.00 36.97 1.75
1015 1057 1.227350 CGCATGGATCTGCTTCGGA 60.227 57.895 5.51 0.00 40.06 4.55
1029 1071 0.912006 TTCGGATGGTGATGGTGGGA 60.912 55.000 0.00 0.00 0.00 4.37
1058 1100 2.665185 GCCATACGATCACGGGCC 60.665 66.667 0.00 0.00 44.46 5.80
1095 1137 2.484928 GCTACCTCCGTCGTACCCC 61.485 68.421 0.00 0.00 0.00 4.95
1127 1169 4.084287 CCACAAGTGTACTACCACTCCTA 58.916 47.826 0.00 0.00 44.74 2.94
1266 1308 0.544357 TCGTTGTCTCCATCCAGGGT 60.544 55.000 0.00 0.00 38.24 4.34
1382 1424 4.407945 TGAGAATGCTTACCTACTAACCCC 59.592 45.833 0.00 0.00 0.00 4.95
1467 1509 1.751162 CCGCCGCCAGGGAAAATTA 60.751 57.895 0.00 0.00 38.47 1.40
1468 1510 1.106944 CCGCCGCCAGGGAAAATTAT 61.107 55.000 0.00 0.00 38.47 1.28
1548 1590 0.685097 AAGCGACTAGGAAGCAACCA 59.315 50.000 8.63 0.00 0.00 3.67
1592 1634 2.020720 ACTCACAAACGTGATGCCAAA 58.979 42.857 0.00 0.00 42.42 3.28
1686 1728 3.063526 GCTCTCAGCACCACTCCA 58.936 61.111 0.00 0.00 41.89 3.86
1687 1729 1.375268 GCTCTCAGCACCACTCCAC 60.375 63.158 0.00 0.00 41.89 4.02
1688 1730 1.825281 GCTCTCAGCACCACTCCACT 61.825 60.000 0.00 0.00 41.89 4.00
1689 1731 1.550327 CTCTCAGCACCACTCCACTA 58.450 55.000 0.00 0.00 0.00 2.74
1690 1732 1.476085 CTCTCAGCACCACTCCACTAG 59.524 57.143 0.00 0.00 0.00 2.57
1691 1733 1.075536 TCTCAGCACCACTCCACTAGA 59.924 52.381 0.00 0.00 0.00 2.43
1692 1734 1.203523 CTCAGCACCACTCCACTAGAC 59.796 57.143 0.00 0.00 0.00 2.59
1693 1735 0.969149 CAGCACCACTCCACTAGACA 59.031 55.000 0.00 0.00 0.00 3.41
1731 1775 1.376295 CTTTGCTGCAAATGGGGGC 60.376 57.895 26.18 0.00 32.70 5.80
1732 1776 3.237379 TTTGCTGCAAATGGGGGCG 62.237 57.895 22.84 0.00 0.00 6.13
1889 2222 5.114780 CAAGAGAGGTATCATTGTGGACTG 58.885 45.833 0.00 0.00 0.00 3.51
1901 2234 4.880886 TTGTGGACTGCATCATTTATCG 57.119 40.909 0.00 0.00 0.00 2.92
2047 2415 4.834496 TCTGTTTTTGGATCCAGCTCAATT 59.166 37.500 15.53 0.00 0.00 2.32
2108 2477 2.532531 CAGGTTAAGCATGCACTTCG 57.467 50.000 21.98 0.00 0.00 3.79
2117 2508 4.185467 AGCATGCACTTCGAGATATAGG 57.815 45.455 21.98 0.00 0.00 2.57
2159 2551 9.965902 AATGAGGTTTAACTGAATCATTAGAGT 57.034 29.630 12.69 0.00 36.04 3.24
2160 2552 9.965902 ATGAGGTTTAACTGAATCATTAGAGTT 57.034 29.630 0.00 0.00 33.32 3.01
2161 2553 9.219603 TGAGGTTTAACTGAATCATTAGAGTTG 57.780 33.333 5.00 0.00 31.25 3.16
2162 2554 9.220767 GAGGTTTAACTGAATCATTAGAGTTGT 57.779 33.333 5.00 0.00 31.25 3.32
2163 2555 9.574516 AGGTTTAACTGAATCATTAGAGTTGTT 57.425 29.630 5.00 0.00 31.25 2.83
2169 2561 7.588512 ACTGAATCATTAGAGTTGTTTGAAGC 58.411 34.615 0.00 0.00 0.00 3.86
2170 2562 7.446625 ACTGAATCATTAGAGTTGTTTGAAGCT 59.553 33.333 0.00 0.00 0.00 3.74
2171 2563 8.846943 TGAATCATTAGAGTTGTTTGAAGCTA 57.153 30.769 0.00 0.00 0.00 3.32
2172 2564 9.283768 TGAATCATTAGAGTTGTTTGAAGCTAA 57.716 29.630 0.00 0.00 0.00 3.09
2176 2568 9.507329 TCATTAGAGTTGTTTGAAGCTAATTCT 57.493 29.630 0.00 0.00 38.83 2.40
2181 2573 9.732130 AGAGTTGTTTGAAGCTAATTCTTAGAT 57.268 29.630 0.00 0.00 38.83 1.98
2182 2574 9.766277 GAGTTGTTTGAAGCTAATTCTTAGATG 57.234 33.333 0.00 0.00 38.83 2.90
2183 2575 9.507329 AGTTGTTTGAAGCTAATTCTTAGATGA 57.493 29.630 0.00 0.00 38.83 2.92
2186 2578 9.725019 TGTTTGAAGCTAATTCTTAGATGAAGA 57.275 29.630 0.00 0.00 42.69 2.87
2200 2592 9.261180 TCTTAGATGAAGAATAATAAAGCACCG 57.739 33.333 0.00 0.00 41.39 4.94
2201 2593 6.867662 AGATGAAGAATAATAAAGCACCGG 57.132 37.500 0.00 0.00 0.00 5.28
2202 2594 5.765182 AGATGAAGAATAATAAAGCACCGGG 59.235 40.000 6.32 0.00 0.00 5.73
2203 2595 4.204012 TGAAGAATAATAAAGCACCGGGG 58.796 43.478 6.32 0.84 0.00 5.73
2204 2596 3.223674 AGAATAATAAAGCACCGGGGG 57.776 47.619 5.47 0.00 0.00 5.40
2205 2597 1.611977 GAATAATAAAGCACCGGGGGC 59.388 52.381 15.02 15.02 0.00 5.80
2206 2598 0.536460 ATAATAAAGCACCGGGGGCG 60.536 55.000 17.00 0.00 36.08 6.13
2207 2599 2.612095 TAATAAAGCACCGGGGGCGG 62.612 60.000 17.00 0.00 36.08 6.13
2213 2605 2.923035 CACCGGGGGCGGATAGAT 60.923 66.667 6.32 0.00 0.00 1.98
2214 2606 2.122547 ACCGGGGGCGGATAGATT 60.123 61.111 6.32 0.00 0.00 2.40
2215 2607 1.768888 ACCGGGGGCGGATAGATTT 60.769 57.895 6.32 0.00 0.00 2.17
2216 2608 1.003718 CCGGGGGCGGATAGATTTC 60.004 63.158 0.00 0.00 0.00 2.17
2217 2609 1.003718 CGGGGGCGGATAGATTTCC 60.004 63.158 0.00 0.00 0.00 3.13
2218 2610 1.764571 CGGGGGCGGATAGATTTCCA 61.765 60.000 0.00 0.00 35.34 3.53
2219 2611 0.036875 GGGGGCGGATAGATTTCCAG 59.963 60.000 0.00 0.00 35.34 3.86
2220 2612 0.606673 GGGGCGGATAGATTTCCAGC 60.607 60.000 0.00 0.00 35.34 4.85
2221 2613 0.108585 GGGCGGATAGATTTCCAGCA 59.891 55.000 8.68 0.00 37.17 4.41
2222 2614 1.517242 GGCGGATAGATTTCCAGCAG 58.483 55.000 8.68 0.00 37.17 4.24
2223 2615 1.070758 GGCGGATAGATTTCCAGCAGA 59.929 52.381 8.68 0.00 37.17 4.26
2224 2616 2.411904 GCGGATAGATTTCCAGCAGAG 58.588 52.381 0.00 0.00 36.20 3.35
2225 2617 2.224161 GCGGATAGATTTCCAGCAGAGT 60.224 50.000 0.00 0.00 36.20 3.24
2226 2618 3.742640 GCGGATAGATTTCCAGCAGAGTT 60.743 47.826 0.00 0.00 36.20 3.01
2227 2619 4.446371 CGGATAGATTTCCAGCAGAGTTT 58.554 43.478 0.00 0.00 35.34 2.66
2228 2620 4.878397 CGGATAGATTTCCAGCAGAGTTTT 59.122 41.667 0.00 0.00 35.34 2.43
2229 2621 6.049149 CGGATAGATTTCCAGCAGAGTTTTA 58.951 40.000 0.00 0.00 35.34 1.52
2230 2622 6.708054 CGGATAGATTTCCAGCAGAGTTTTAT 59.292 38.462 0.00 0.00 35.34 1.40
2231 2623 7.872993 CGGATAGATTTCCAGCAGAGTTTTATA 59.127 37.037 0.00 0.00 35.34 0.98
2232 2624 9.561069 GGATAGATTTCCAGCAGAGTTTTATAA 57.439 33.333 0.00 0.00 35.72 0.98
2236 2628 8.743714 AGATTTCCAGCAGAGTTTTATAAAAGG 58.256 33.333 10.92 7.24 0.00 3.11
2237 2629 7.833285 TTTCCAGCAGAGTTTTATAAAAGGT 57.167 32.000 10.92 1.94 0.00 3.50
2238 2630 6.817765 TCCAGCAGAGTTTTATAAAAGGTG 57.182 37.500 10.92 13.49 0.00 4.00
2239 2631 5.183140 TCCAGCAGAGTTTTATAAAAGGTGC 59.817 40.000 21.06 21.06 32.97 5.01
2240 2632 5.183904 CCAGCAGAGTTTTATAAAAGGTGCT 59.816 40.000 23.50 23.50 38.71 4.40
2241 2633 6.088824 CAGCAGAGTTTTATAAAAGGTGCTG 58.911 40.000 30.85 30.85 43.28 4.41
2242 2634 5.183904 AGCAGAGTTTTATAAAAGGTGCTGG 59.816 40.000 26.06 11.94 37.69 4.85
2243 2635 5.402398 CAGAGTTTTATAAAAGGTGCTGGC 58.598 41.667 10.92 0.00 0.00 4.85
2244 2636 5.048083 CAGAGTTTTATAAAAGGTGCTGGCA 60.048 40.000 10.92 0.00 0.00 4.92
2245 2637 5.716703 AGAGTTTTATAAAAGGTGCTGGCAT 59.283 36.000 10.92 0.00 0.00 4.40
2246 2638 6.889722 AGAGTTTTATAAAAGGTGCTGGCATA 59.110 34.615 10.92 0.00 0.00 3.14
2247 2639 7.561356 AGAGTTTTATAAAAGGTGCTGGCATAT 59.439 33.333 10.92 0.00 0.00 1.78
2248 2640 7.716612 AGTTTTATAAAAGGTGCTGGCATATC 58.283 34.615 10.92 0.00 0.00 1.63
2249 2641 7.341769 AGTTTTATAAAAGGTGCTGGCATATCA 59.658 33.333 10.92 0.00 0.00 2.15
2250 2642 7.838079 TTTATAAAAGGTGCTGGCATATCAT 57.162 32.000 0.00 0.00 0.00 2.45
2251 2643 5.972107 ATAAAAGGTGCTGGCATATCATC 57.028 39.130 0.00 0.00 0.00 2.92
2252 2644 3.301794 AAAGGTGCTGGCATATCATCA 57.698 42.857 0.00 0.00 0.00 3.07
2253 2645 3.301794 AAGGTGCTGGCATATCATCAA 57.698 42.857 0.00 0.00 0.00 2.57
2254 2646 3.301794 AGGTGCTGGCATATCATCAAA 57.698 42.857 0.00 0.00 0.00 2.69
2255 2647 3.220110 AGGTGCTGGCATATCATCAAAG 58.780 45.455 0.00 0.00 0.00 2.77
2256 2648 2.295349 GGTGCTGGCATATCATCAAAGG 59.705 50.000 0.00 0.00 0.00 3.11
2257 2649 2.295349 GTGCTGGCATATCATCAAAGGG 59.705 50.000 0.00 0.00 0.00 3.95
2258 2650 1.891150 GCTGGCATATCATCAAAGGGG 59.109 52.381 0.00 0.00 0.00 4.79
2259 2651 2.489619 GCTGGCATATCATCAAAGGGGA 60.490 50.000 0.00 0.00 0.00 4.81
2260 2652 3.816842 GCTGGCATATCATCAAAGGGGAT 60.817 47.826 0.00 0.00 0.00 3.85
2261 2653 4.413760 CTGGCATATCATCAAAGGGGATT 58.586 43.478 0.00 0.00 0.00 3.01
2262 2654 4.818447 TGGCATATCATCAAAGGGGATTT 58.182 39.130 0.00 0.00 0.00 2.17
2264 2656 4.562143 GGCATATCATCAAAGGGGATTTGC 60.562 45.833 0.00 0.00 46.61 3.68
2265 2657 4.282703 GCATATCATCAAAGGGGATTTGCT 59.717 41.667 0.00 0.00 46.61 3.91
2266 2658 5.566230 GCATATCATCAAAGGGGATTTGCTC 60.566 44.000 0.00 0.00 46.61 4.26
2267 2659 2.738743 TCATCAAAGGGGATTTGCTCC 58.261 47.619 0.00 0.00 46.61 4.70
2276 2668 2.967599 GGATTTGCTCCCAATGTTCC 57.032 50.000 0.00 0.00 38.19 3.62
2277 2669 2.178580 GGATTTGCTCCCAATGTTCCA 58.821 47.619 0.00 0.00 38.19 3.53
2278 2670 2.167075 GGATTTGCTCCCAATGTTCCAG 59.833 50.000 0.00 0.00 38.19 3.86
2279 2671 1.631405 TTTGCTCCCAATGTTCCAGG 58.369 50.000 0.00 0.00 0.00 4.45
2280 2672 0.776810 TTGCTCCCAATGTTCCAGGA 59.223 50.000 0.00 0.00 0.00 3.86
2281 2673 1.002069 TGCTCCCAATGTTCCAGGAT 58.998 50.000 0.00 0.00 0.00 3.24
2282 2674 1.358787 TGCTCCCAATGTTCCAGGATT 59.641 47.619 0.00 0.00 0.00 3.01
2283 2675 2.225343 TGCTCCCAATGTTCCAGGATTT 60.225 45.455 0.00 0.00 0.00 2.17
2284 2676 3.011144 TGCTCCCAATGTTCCAGGATTTA 59.989 43.478 0.00 0.00 0.00 1.40
2285 2677 4.218312 GCTCCCAATGTTCCAGGATTTAT 58.782 43.478 0.00 0.00 0.00 1.40
2286 2678 4.651045 GCTCCCAATGTTCCAGGATTTATT 59.349 41.667 0.00 0.00 0.00 1.40
2287 2679 5.221322 GCTCCCAATGTTCCAGGATTTATTC 60.221 44.000 0.00 0.00 0.00 1.75
2288 2680 4.887071 TCCCAATGTTCCAGGATTTATTCG 59.113 41.667 0.00 0.00 0.00 3.34
2289 2681 4.499696 CCCAATGTTCCAGGATTTATTCGC 60.500 45.833 0.00 0.00 0.00 4.70
2290 2682 4.339247 CCAATGTTCCAGGATTTATTCGCT 59.661 41.667 0.00 0.00 0.00 4.93
2291 2683 5.276270 CAATGTTCCAGGATTTATTCGCTG 58.724 41.667 0.00 0.00 0.00 5.18
2292 2684 3.278574 TGTTCCAGGATTTATTCGCTGG 58.721 45.455 0.00 0.00 41.00 4.85
2293 2685 3.279434 GTTCCAGGATTTATTCGCTGGT 58.721 45.455 0.00 0.00 40.72 4.00
2294 2686 3.194005 TCCAGGATTTATTCGCTGGTC 57.806 47.619 0.00 0.00 40.72 4.02
2295 2687 2.503765 TCCAGGATTTATTCGCTGGTCA 59.496 45.455 0.00 0.00 40.72 4.02
2296 2688 2.874701 CCAGGATTTATTCGCTGGTCAG 59.125 50.000 0.00 0.00 37.71 3.51
2309 2701 3.615849 CTGGTCAGCTTCAAGTGTTTC 57.384 47.619 0.00 0.00 0.00 2.78
2310 2702 2.945008 CTGGTCAGCTTCAAGTGTTTCA 59.055 45.455 0.00 0.00 0.00 2.69
2311 2703 2.682856 TGGTCAGCTTCAAGTGTTTCAC 59.317 45.455 0.00 0.00 34.10 3.18
2312 2704 2.033424 GGTCAGCTTCAAGTGTTTCACC 59.967 50.000 0.00 0.00 34.49 4.02
2313 2705 2.945668 GTCAGCTTCAAGTGTTTCACCT 59.054 45.455 0.00 0.00 34.49 4.00
2314 2706 2.945008 TCAGCTTCAAGTGTTTCACCTG 59.055 45.455 0.00 0.00 34.49 4.00
2315 2707 2.945008 CAGCTTCAAGTGTTTCACCTGA 59.055 45.455 0.00 0.00 33.66 3.86
2316 2708 3.378112 CAGCTTCAAGTGTTTCACCTGAA 59.622 43.478 11.63 11.63 40.89 3.02
2317 2709 4.037208 CAGCTTCAAGTGTTTCACCTGAAT 59.963 41.667 12.30 0.06 41.81 2.57
2318 2710 4.646492 AGCTTCAAGTGTTTCACCTGAATT 59.354 37.500 12.30 4.45 41.81 2.17
2319 2711 5.127682 AGCTTCAAGTGTTTCACCTGAATTT 59.872 36.000 12.30 4.19 41.81 1.82
2320 2712 5.812127 GCTTCAAGTGTTTCACCTGAATTTT 59.188 36.000 12.30 0.00 41.81 1.82
2321 2713 6.237915 GCTTCAAGTGTTTCACCTGAATTTTG 60.238 38.462 12.30 4.88 41.81 2.44
2322 2714 5.659463 TCAAGTGTTTCACCTGAATTTTGG 58.341 37.500 0.00 0.00 32.73 3.28
2323 2715 5.420421 TCAAGTGTTTCACCTGAATTTTGGA 59.580 36.000 4.91 0.00 32.73 3.53
2324 2716 5.930837 AGTGTTTCACCTGAATTTTGGAA 57.069 34.783 4.91 0.00 34.49 3.53
2325 2717 5.660460 AGTGTTTCACCTGAATTTTGGAAC 58.340 37.500 4.91 1.01 34.49 3.62
2326 2718 4.808895 GTGTTTCACCTGAATTTTGGAACC 59.191 41.667 4.91 0.00 33.54 3.62
2327 2719 4.467795 TGTTTCACCTGAATTTTGGAACCA 59.532 37.500 4.91 0.00 33.54 3.67
2328 2720 5.130145 TGTTTCACCTGAATTTTGGAACCAT 59.870 36.000 4.91 0.00 33.54 3.55
2329 2721 5.885449 TTCACCTGAATTTTGGAACCATT 57.115 34.783 4.91 0.00 0.00 3.16
2330 2722 6.985653 TTCACCTGAATTTTGGAACCATTA 57.014 33.333 4.91 0.00 0.00 1.90
2331 2723 6.339587 TCACCTGAATTTTGGAACCATTAC 57.660 37.500 4.91 0.00 0.00 1.89
2332 2724 6.074648 TCACCTGAATTTTGGAACCATTACT 58.925 36.000 4.91 0.00 0.00 2.24
2333 2725 6.553100 TCACCTGAATTTTGGAACCATTACTT 59.447 34.615 4.91 0.00 0.00 2.24
2334 2726 7.070571 TCACCTGAATTTTGGAACCATTACTTT 59.929 33.333 4.91 0.00 0.00 2.66
2335 2727 7.171337 CACCTGAATTTTGGAACCATTACTTTG 59.829 37.037 4.91 0.00 0.00 2.77
2336 2728 6.147656 CCTGAATTTTGGAACCATTACTTTGC 59.852 38.462 0.00 0.00 0.00 3.68
2337 2729 6.825610 TGAATTTTGGAACCATTACTTTGCT 58.174 32.000 0.00 0.00 0.00 3.91
2338 2730 6.928492 TGAATTTTGGAACCATTACTTTGCTC 59.072 34.615 0.00 0.00 0.00 4.26
2339 2731 5.860941 TTTTGGAACCATTACTTTGCTCA 57.139 34.783 0.00 0.00 0.00 4.26
2340 2732 4.846779 TTGGAACCATTACTTTGCTCAC 57.153 40.909 0.00 0.00 0.00 3.51
2341 2733 4.098914 TGGAACCATTACTTTGCTCACT 57.901 40.909 0.00 0.00 0.00 3.41
2342 2734 3.820467 TGGAACCATTACTTTGCTCACTG 59.180 43.478 0.00 0.00 0.00 3.66
2343 2735 4.072131 GGAACCATTACTTTGCTCACTGA 58.928 43.478 0.00 0.00 0.00 3.41
2344 2736 4.154918 GGAACCATTACTTTGCTCACTGAG 59.845 45.833 1.21 1.21 0.00 3.35
2345 2737 4.623932 ACCATTACTTTGCTCACTGAGA 57.376 40.909 10.45 0.00 0.00 3.27
2346 2738 4.973168 ACCATTACTTTGCTCACTGAGAA 58.027 39.130 10.45 0.00 0.00 2.87
2347 2739 5.376625 ACCATTACTTTGCTCACTGAGAAA 58.623 37.500 10.45 2.43 0.00 2.52
2348 2740 5.827797 ACCATTACTTTGCTCACTGAGAAAA 59.172 36.000 10.45 10.86 35.09 2.29
2349 2741 6.145535 CCATTACTTTGCTCACTGAGAAAAC 58.854 40.000 10.45 0.00 32.78 2.43
2350 2742 6.238731 CCATTACTTTGCTCACTGAGAAAACA 60.239 38.462 10.45 0.00 32.78 2.83
2351 2743 4.889832 ACTTTGCTCACTGAGAAAACAG 57.110 40.909 10.45 3.83 42.78 3.16
2352 2744 4.517285 ACTTTGCTCACTGAGAAAACAGA 58.483 39.130 10.45 0.00 40.63 3.41
2353 2745 4.574013 ACTTTGCTCACTGAGAAAACAGAG 59.426 41.667 10.45 2.80 40.63 3.35
2354 2746 3.117491 TGCTCACTGAGAAAACAGAGG 57.883 47.619 10.45 0.00 40.63 3.69
2355 2747 1.803555 GCTCACTGAGAAAACAGAGGC 59.196 52.381 10.45 0.00 40.63 4.70
2356 2748 2.064762 CTCACTGAGAAAACAGAGGCG 58.935 52.381 0.00 0.00 40.63 5.52
2357 2749 1.151668 CACTGAGAAAACAGAGGCGG 58.848 55.000 0.00 0.00 40.63 6.13
2358 2750 0.759346 ACTGAGAAAACAGAGGCGGT 59.241 50.000 0.00 0.00 40.63 5.68
2359 2751 1.968493 ACTGAGAAAACAGAGGCGGTA 59.032 47.619 0.00 0.00 40.63 4.02
2360 2752 2.288886 ACTGAGAAAACAGAGGCGGTAC 60.289 50.000 0.00 0.00 40.63 3.34
2376 2768 3.999229 GGTACGAATTGAGCAGTTCAG 57.001 47.619 6.55 2.64 37.07 3.02
2377 2769 3.585862 GGTACGAATTGAGCAGTTCAGA 58.414 45.455 6.55 0.00 37.07 3.27
2378 2770 3.368236 GGTACGAATTGAGCAGTTCAGAC 59.632 47.826 6.55 3.53 37.07 3.51
2379 2771 2.417719 ACGAATTGAGCAGTTCAGACC 58.582 47.619 6.55 0.00 37.07 3.85
2380 2772 1.734465 CGAATTGAGCAGTTCAGACCC 59.266 52.381 6.55 0.00 37.07 4.46
2381 2773 2.783135 GAATTGAGCAGTTCAGACCCA 58.217 47.619 1.45 0.00 37.07 4.51
2382 2774 3.350833 GAATTGAGCAGTTCAGACCCAT 58.649 45.455 1.45 0.00 37.07 4.00
2383 2775 2.479566 TTGAGCAGTTCAGACCCATC 57.520 50.000 0.00 0.00 37.07 3.51
2384 2776 1.649321 TGAGCAGTTCAGACCCATCT 58.351 50.000 0.00 0.00 34.57 2.90
2385 2777 2.820178 TGAGCAGTTCAGACCCATCTA 58.180 47.619 0.00 0.00 32.25 1.98
2386 2778 3.378512 TGAGCAGTTCAGACCCATCTAT 58.621 45.455 0.00 0.00 32.25 1.98
2387 2779 3.386078 TGAGCAGTTCAGACCCATCTATC 59.614 47.826 0.00 0.00 32.25 2.08
2388 2780 3.640967 GAGCAGTTCAGACCCATCTATCT 59.359 47.826 0.00 0.00 32.25 1.98
2389 2781 4.036518 AGCAGTTCAGACCCATCTATCTT 58.963 43.478 0.00 0.00 32.25 2.40
2390 2782 4.100808 AGCAGTTCAGACCCATCTATCTTC 59.899 45.833 0.00 0.00 32.25 2.87
2391 2783 4.100808 GCAGTTCAGACCCATCTATCTTCT 59.899 45.833 0.00 0.00 32.25 2.85
2392 2784 5.599732 CAGTTCAGACCCATCTATCTTCTG 58.400 45.833 0.00 0.00 35.93 3.02
2393 2785 5.362143 CAGTTCAGACCCATCTATCTTCTGA 59.638 44.000 0.00 0.00 40.69 3.27
2394 2786 5.960811 AGTTCAGACCCATCTATCTTCTGAA 59.039 40.000 7.99 7.99 46.23 3.02
2396 2788 6.662865 TCAGACCCATCTATCTTCTGAATC 57.337 41.667 0.00 0.00 39.74 2.52
2397 2789 6.380414 TCAGACCCATCTATCTTCTGAATCT 58.620 40.000 0.00 0.00 39.74 2.40
2398 2790 7.530435 TCAGACCCATCTATCTTCTGAATCTA 58.470 38.462 0.00 0.00 39.74 1.98
2399 2791 8.007153 TCAGACCCATCTATCTTCTGAATCTAA 58.993 37.037 0.00 0.00 39.74 2.10
2400 2792 8.306038 CAGACCCATCTATCTTCTGAATCTAAG 58.694 40.741 0.00 0.00 36.58 2.18
2401 2793 8.010105 AGACCCATCTATCTTCTGAATCTAAGT 58.990 37.037 0.00 0.00 31.46 2.24
2402 2794 8.560124 ACCCATCTATCTTCTGAATCTAAGTT 57.440 34.615 0.00 0.00 0.00 2.66
2403 2795 8.997734 ACCCATCTATCTTCTGAATCTAAGTTT 58.002 33.333 0.00 0.00 0.00 2.66
2404 2796 9.487790 CCCATCTATCTTCTGAATCTAAGTTTC 57.512 37.037 0.00 0.00 0.00 2.78
2425 2817 9.119418 AGTTTCAAAATTTTTATCAAGGTTGGG 57.881 29.630 0.00 0.00 0.00 4.12
2426 2818 9.114952 GTTTCAAAATTTTTATCAAGGTTGGGA 57.885 29.630 0.00 0.00 0.00 4.37
2427 2819 8.669946 TTCAAAATTTTTATCAAGGTTGGGAC 57.330 30.769 0.00 0.00 0.00 4.46
2428 2820 7.796054 TCAAAATTTTTATCAAGGTTGGGACA 58.204 30.769 0.00 0.00 0.00 4.02
2443 2835 4.271696 TGGGACAAATAGACTCACACAG 57.728 45.455 0.00 0.00 31.92 3.66
2444 2836 3.901222 TGGGACAAATAGACTCACACAGA 59.099 43.478 0.00 0.00 31.92 3.41
2445 2837 4.532126 TGGGACAAATAGACTCACACAGAT 59.468 41.667 0.00 0.00 31.92 2.90
2446 2838 5.013079 TGGGACAAATAGACTCACACAGATT 59.987 40.000 0.00 0.00 31.92 2.40
2447 2839 5.352569 GGGACAAATAGACTCACACAGATTG 59.647 44.000 0.00 0.00 0.00 2.67
2448 2840 5.163814 GGACAAATAGACTCACACAGATTGC 60.164 44.000 0.00 0.00 0.00 3.56
2449 2841 4.389992 ACAAATAGACTCACACAGATTGCG 59.610 41.667 0.00 0.00 0.00 4.85
2450 2842 1.996292 TAGACTCACACAGATTGCGC 58.004 50.000 0.00 0.00 0.00 6.09
2451 2843 0.033920 AGACTCACACAGATTGCGCA 59.966 50.000 5.66 5.66 0.00 6.09
2452 2844 1.081892 GACTCACACAGATTGCGCAT 58.918 50.000 12.75 0.40 0.00 4.73
2453 2845 1.466167 GACTCACACAGATTGCGCATT 59.534 47.619 12.75 8.03 0.00 3.56
2454 2846 1.466167 ACTCACACAGATTGCGCATTC 59.534 47.619 21.59 21.59 0.00 2.67
2455 2847 1.736126 CTCACACAGATTGCGCATTCT 59.264 47.619 25.05 25.05 0.00 2.40
2456 2848 1.465777 TCACACAGATTGCGCATTCTG 59.534 47.619 40.14 40.14 41.83 3.02
2457 2849 1.198408 CACACAGATTGCGCATTCTGT 59.802 47.619 41.16 41.16 46.71 3.41
2459 2851 0.806868 ACAGATTGCGCATTCTGTGG 59.193 50.000 43.58 29.45 45.11 4.17
2460 2852 0.806868 CAGATTGCGCATTCTGTGGT 59.193 50.000 36.67 16.46 35.33 4.16
2461 2853 0.806868 AGATTGCGCATTCTGTGGTG 59.193 50.000 28.64 0.00 0.00 4.17
2462 2854 0.799534 GATTGCGCATTCTGTGGTGC 60.800 55.000 21.77 0.00 40.78 5.01
2464 2856 2.177531 GCGCATTCTGTGGTGCAG 59.822 61.111 0.30 0.00 46.34 4.41
2465 2857 2.177531 CGCATTCTGTGGTGCAGC 59.822 61.111 9.47 9.47 44.66 5.25
2466 2858 2.570181 GCATTCTGTGGTGCAGCC 59.430 61.111 14.36 5.89 44.66 4.85
2467 2859 2.872557 CATTCTGTGGTGCAGCCG 59.127 61.111 14.36 1.92 44.66 5.52
2468 2860 1.968017 CATTCTGTGGTGCAGCCGT 60.968 57.895 14.36 0.00 44.66 5.68
2469 2861 1.672356 ATTCTGTGGTGCAGCCGTC 60.672 57.895 14.36 4.73 44.66 4.79
2470 2862 3.825160 TTCTGTGGTGCAGCCGTCC 62.825 63.158 14.36 0.00 44.66 4.79
2473 2865 4.947147 GTGGTGCAGCCGTCCCAA 62.947 66.667 14.36 0.00 41.21 4.12
2474 2866 4.196778 TGGTGCAGCCGTCCCAAA 62.197 61.111 14.36 0.00 41.21 3.28
2475 2867 2.676471 GGTGCAGCCGTCCCAAAT 60.676 61.111 4.03 0.00 0.00 2.32
2476 2868 2.275380 GGTGCAGCCGTCCCAAATT 61.275 57.895 4.03 0.00 0.00 1.82
2477 2869 1.080569 GTGCAGCCGTCCCAAATTG 60.081 57.895 0.00 0.00 0.00 2.32
2478 2870 2.125952 GCAGCCGTCCCAAATTGC 60.126 61.111 0.00 0.00 0.00 3.56
2479 2871 2.639327 GCAGCCGTCCCAAATTGCT 61.639 57.895 0.00 0.00 0.00 3.91
2480 2872 1.966762 CAGCCGTCCCAAATTGCTT 59.033 52.632 0.00 0.00 0.00 3.91
2481 2873 0.318120 CAGCCGTCCCAAATTGCTTT 59.682 50.000 0.00 0.00 0.00 3.51
2482 2874 0.603065 AGCCGTCCCAAATTGCTTTC 59.397 50.000 0.00 0.00 0.00 2.62
2483 2875 0.316841 GCCGTCCCAAATTGCTTTCA 59.683 50.000 0.00 0.00 0.00 2.69
2484 2876 1.066929 GCCGTCCCAAATTGCTTTCAT 60.067 47.619 0.00 0.00 0.00 2.57
2485 2877 2.609350 CCGTCCCAAATTGCTTTCATG 58.391 47.619 0.00 0.00 0.00 3.07
2486 2878 1.994779 CGTCCCAAATTGCTTTCATGC 59.005 47.619 0.00 0.00 0.00 4.06
2487 2879 2.349590 GTCCCAAATTGCTTTCATGCC 58.650 47.619 0.00 0.00 0.00 4.40
2488 2880 1.067000 TCCCAAATTGCTTTCATGCCG 60.067 47.619 0.00 0.00 0.00 5.69
2489 2881 1.361793 CCAAATTGCTTTCATGCCGG 58.638 50.000 0.00 0.00 0.00 6.13
2490 2882 1.067000 CCAAATTGCTTTCATGCCGGA 60.067 47.619 5.05 0.00 0.00 5.14
2491 2883 2.419021 CCAAATTGCTTTCATGCCGGAT 60.419 45.455 5.05 0.00 0.00 4.18
2492 2884 3.181477 CCAAATTGCTTTCATGCCGGATA 60.181 43.478 5.05 0.00 0.00 2.59
2493 2885 3.996150 AATTGCTTTCATGCCGGATAG 57.004 42.857 5.05 0.00 0.00 2.08
2494 2886 2.708216 TTGCTTTCATGCCGGATAGA 57.292 45.000 5.05 0.00 0.00 1.98
2495 2887 2.708216 TGCTTTCATGCCGGATAGAA 57.292 45.000 5.05 1.53 0.00 2.10
2496 2888 2.997980 TGCTTTCATGCCGGATAGAAA 58.002 42.857 5.05 10.48 0.00 2.52
2497 2889 2.682856 TGCTTTCATGCCGGATAGAAAC 59.317 45.455 5.05 7.02 0.00 2.78
2498 2890 2.682856 GCTTTCATGCCGGATAGAAACA 59.317 45.455 5.05 0.00 0.00 2.83
2499 2891 3.316308 GCTTTCATGCCGGATAGAAACAT 59.684 43.478 5.05 0.00 0.00 2.71
2500 2892 4.555511 GCTTTCATGCCGGATAGAAACATC 60.556 45.833 5.05 0.00 0.00 3.06
2501 2893 3.126001 TCATGCCGGATAGAAACATCC 57.874 47.619 5.05 0.00 41.06 3.51
2502 2894 2.705658 TCATGCCGGATAGAAACATCCT 59.294 45.455 5.05 0.00 42.12 3.24
2503 2895 3.136443 TCATGCCGGATAGAAACATCCTT 59.864 43.478 5.05 0.00 42.12 3.36
2504 2896 4.346709 TCATGCCGGATAGAAACATCCTTA 59.653 41.667 5.05 0.00 42.12 2.69
2505 2897 4.764050 TGCCGGATAGAAACATCCTTAA 57.236 40.909 5.05 0.00 42.12 1.85
2506 2898 5.105567 TGCCGGATAGAAACATCCTTAAA 57.894 39.130 5.05 0.00 42.12 1.52
2507 2899 5.123227 TGCCGGATAGAAACATCCTTAAAG 58.877 41.667 5.05 0.00 42.12 1.85
2508 2900 4.515567 GCCGGATAGAAACATCCTTAAAGG 59.484 45.833 5.05 0.00 42.12 3.11
2509 2901 5.063880 CCGGATAGAAACATCCTTAAAGGG 58.936 45.833 0.00 0.00 42.12 3.95
2510 2902 5.063880 CGGATAGAAACATCCTTAAAGGGG 58.936 45.833 0.00 0.00 42.12 4.79
2511 2903 5.397559 CGGATAGAAACATCCTTAAAGGGGT 60.398 44.000 0.00 0.00 42.12 4.95
2512 2904 5.828328 GGATAGAAACATCCTTAAAGGGGTG 59.172 44.000 0.00 0.00 41.24 4.61
2513 2905 4.047627 AGAAACATCCTTAAAGGGGTGG 57.952 45.455 2.95 0.00 41.52 4.61
2514 2906 3.401342 AGAAACATCCTTAAAGGGGTGGT 59.599 43.478 2.95 0.00 39.41 4.16
2515 2907 2.899303 ACATCCTTAAAGGGGTGGTG 57.101 50.000 2.95 0.00 41.52 4.17
2516 2908 1.357761 ACATCCTTAAAGGGGTGGTGG 59.642 52.381 2.95 0.00 41.52 4.61
2517 2909 1.357761 CATCCTTAAAGGGGTGGTGGT 59.642 52.381 0.00 0.00 35.59 4.16
2518 2910 1.069775 TCCTTAAAGGGGTGGTGGTC 58.930 55.000 0.00 0.00 35.59 4.02
2519 2911 1.073098 CCTTAAAGGGGTGGTGGTCT 58.927 55.000 0.00 0.00 0.00 3.85
2520 2912 1.427753 CCTTAAAGGGGTGGTGGTCTT 59.572 52.381 0.00 0.00 0.00 3.01
2521 2913 2.514803 CTTAAAGGGGTGGTGGTCTTG 58.485 52.381 0.00 0.00 0.00 3.02
2522 2914 0.111639 TAAAGGGGTGGTGGTCTTGC 59.888 55.000 0.00 0.00 0.00 4.01
2523 2915 1.943730 AAAGGGGTGGTGGTCTTGCA 61.944 55.000 0.00 0.00 0.00 4.08
2524 2916 1.729267 AAGGGGTGGTGGTCTTGCAT 61.729 55.000 0.00 0.00 0.00 3.96
2525 2917 1.978617 GGGGTGGTGGTCTTGCATG 60.979 63.158 0.00 0.00 0.00 4.06
2526 2918 1.074775 GGGTGGTGGTCTTGCATGA 59.925 57.895 0.00 0.00 0.00 3.07
2527 2919 0.539438 GGGTGGTGGTCTTGCATGAA 60.539 55.000 3.51 0.00 0.00 2.57
2528 2920 1.327303 GGTGGTGGTCTTGCATGAAA 58.673 50.000 3.51 0.00 0.00 2.69
2529 2921 1.000274 GGTGGTGGTCTTGCATGAAAC 60.000 52.381 3.51 6.07 0.00 2.78
2530 2922 0.950836 TGGTGGTCTTGCATGAAACG 59.049 50.000 3.51 0.00 0.00 3.60
2531 2923 0.387239 GGTGGTCTTGCATGAAACGC 60.387 55.000 3.51 7.12 0.00 4.84
2532 2924 0.593128 GTGGTCTTGCATGAAACGCT 59.407 50.000 3.51 0.00 0.00 5.07
2533 2925 0.874390 TGGTCTTGCATGAAACGCTC 59.126 50.000 3.51 0.00 0.00 5.03
2534 2926 0.169009 GGTCTTGCATGAAACGCTCC 59.831 55.000 3.51 0.00 0.00 4.70
2535 2927 0.874390 GTCTTGCATGAAACGCTCCA 59.126 50.000 3.51 0.00 0.00 3.86
2536 2928 1.470098 GTCTTGCATGAAACGCTCCAT 59.530 47.619 3.51 0.00 0.00 3.41
2537 2929 1.469703 TCTTGCATGAAACGCTCCATG 59.530 47.619 0.00 0.00 42.13 3.66
2538 2930 1.469703 CTTGCATGAAACGCTCCATGA 59.530 47.619 13.47 0.05 41.88 3.07
2539 2931 1.532523 TGCATGAAACGCTCCATGAA 58.467 45.000 13.47 2.66 41.88 2.57
2540 2932 1.885233 TGCATGAAACGCTCCATGAAA 59.115 42.857 13.47 1.28 41.88 2.69
2541 2933 2.492881 TGCATGAAACGCTCCATGAAAT 59.507 40.909 13.47 0.00 41.88 2.17
2542 2934 3.111098 GCATGAAACGCTCCATGAAATC 58.889 45.455 13.47 0.00 41.88 2.17
2543 2935 3.699067 CATGAAACGCTCCATGAAATCC 58.301 45.455 0.00 0.00 41.88 3.01
2544 2936 2.789213 TGAAACGCTCCATGAAATCCA 58.211 42.857 0.00 0.00 0.00 3.41
2545 2937 3.355378 TGAAACGCTCCATGAAATCCAT 58.645 40.909 0.00 0.00 35.44 3.41
2546 2938 4.522114 TGAAACGCTCCATGAAATCCATA 58.478 39.130 0.00 0.00 33.31 2.74
2547 2939 4.335315 TGAAACGCTCCATGAAATCCATAC 59.665 41.667 0.00 0.00 33.31 2.39
2548 2940 2.483876 ACGCTCCATGAAATCCATACG 58.516 47.619 0.00 0.00 33.31 3.06
2549 2941 2.102420 ACGCTCCATGAAATCCATACGA 59.898 45.455 0.00 0.00 33.31 3.43
2550 2942 3.130633 CGCTCCATGAAATCCATACGAA 58.869 45.455 0.00 0.00 33.31 3.85
2551 2943 3.559655 CGCTCCATGAAATCCATACGAAA 59.440 43.478 0.00 0.00 33.31 3.46
2552 2944 4.035091 CGCTCCATGAAATCCATACGAAAA 59.965 41.667 0.00 0.00 33.31 2.29
2553 2945 5.448496 CGCTCCATGAAATCCATACGAAAAA 60.448 40.000 0.00 0.00 33.31 1.94
2576 2968 7.761038 AAACTAGATGGGGTAGTTTTCAAAG 57.239 36.000 0.00 0.00 44.63 2.77
2577 2969 6.449830 ACTAGATGGGGTAGTTTTCAAAGT 57.550 37.500 0.00 0.00 0.00 2.66
2578 2970 6.238648 ACTAGATGGGGTAGTTTTCAAAGTG 58.761 40.000 0.00 0.00 0.00 3.16
2579 2971 4.407365 AGATGGGGTAGTTTTCAAAGTGG 58.593 43.478 0.00 0.00 0.00 4.00
2580 2972 3.955524 TGGGGTAGTTTTCAAAGTGGA 57.044 42.857 0.00 0.00 0.00 4.02
2581 2973 4.463050 TGGGGTAGTTTTCAAAGTGGAT 57.537 40.909 0.00 0.00 0.00 3.41
2582 2974 4.810345 TGGGGTAGTTTTCAAAGTGGATT 58.190 39.130 0.00 0.00 0.00 3.01
2583 2975 5.212745 TGGGGTAGTTTTCAAAGTGGATTT 58.787 37.500 0.00 0.00 0.00 2.17
2584 2976 5.303333 TGGGGTAGTTTTCAAAGTGGATTTC 59.697 40.000 0.00 0.00 0.00 2.17
2585 2977 5.458015 GGGTAGTTTTCAAAGTGGATTTCG 58.542 41.667 0.00 0.00 0.00 3.46
2586 2978 5.239963 GGGTAGTTTTCAAAGTGGATTTCGA 59.760 40.000 0.00 0.00 0.00 3.71
2587 2979 6.238814 GGGTAGTTTTCAAAGTGGATTTCGAA 60.239 38.462 0.00 0.00 0.00 3.71
2588 2980 7.197703 GGTAGTTTTCAAAGTGGATTTCGAAA 58.802 34.615 13.91 13.91 31.74 3.46
2589 2981 7.703197 GGTAGTTTTCAAAGTGGATTTCGAAAA 59.297 33.333 15.66 0.00 36.57 2.29
2590 2982 9.078753 GTAGTTTTCAAAGTGGATTTCGAAAAA 57.921 29.630 15.66 0.78 38.33 1.94
2591 2983 8.185003 AGTTTTCAAAGTGGATTTCGAAAAAG 57.815 30.769 15.66 0.00 38.33 2.27
2592 2984 6.582437 TTTCAAAGTGGATTTCGAAAAAGC 57.418 33.333 15.66 7.40 31.21 3.51
2593 2985 4.286910 TCAAAGTGGATTTCGAAAAAGCG 58.713 39.130 15.66 0.00 31.46 4.68
2594 2986 3.982576 AAGTGGATTTCGAAAAAGCGT 57.017 38.095 15.66 0.00 31.46 5.07
2595 2987 5.007823 TCAAAGTGGATTTCGAAAAAGCGTA 59.992 36.000 15.66 0.00 31.46 4.42
2596 2988 4.400036 AGTGGATTTCGAAAAAGCGTAC 57.600 40.909 15.66 8.48 31.46 3.67
2597 2989 3.120786 AGTGGATTTCGAAAAAGCGTACG 60.121 43.478 15.66 11.84 31.46 3.67
2598 2990 3.058450 TGGATTTCGAAAAAGCGTACGA 58.942 40.909 21.65 0.00 31.46 3.43
2599 2991 3.120923 TGGATTTCGAAAAAGCGTACGAC 60.121 43.478 21.65 10.59 34.59 4.34
2600 2992 3.120923 GGATTTCGAAAAAGCGTACGACA 60.121 43.478 21.65 0.00 34.59 4.35
2601 2993 3.921969 TTTCGAAAAAGCGTACGACAA 57.078 38.095 21.65 0.00 34.59 3.18
2602 2994 3.921969 TTCGAAAAAGCGTACGACAAA 57.078 38.095 21.65 0.00 34.59 2.83
2603 2995 3.492725 TCGAAAAAGCGTACGACAAAG 57.507 42.857 21.65 3.41 0.00 2.77
2604 2996 2.859538 TCGAAAAAGCGTACGACAAAGT 59.140 40.909 21.65 0.00 0.00 2.66
2605 2997 3.061006 TCGAAAAAGCGTACGACAAAGTC 60.061 43.478 21.65 7.29 0.00 3.01
2606 2998 3.301963 CGAAAAAGCGTACGACAAAGTCA 60.302 43.478 21.65 0.00 32.09 3.41
2607 2999 4.580528 GAAAAAGCGTACGACAAAGTCAA 58.419 39.130 21.65 0.00 32.09 3.18
2608 3000 4.603231 AAAAGCGTACGACAAAGTCAAA 57.397 36.364 21.65 0.00 32.09 2.69
2609 3001 4.806342 AAAGCGTACGACAAAGTCAAAT 57.194 36.364 21.65 0.00 32.09 2.32
2610 3002 3.788434 AGCGTACGACAAAGTCAAATG 57.212 42.857 21.65 0.00 32.09 2.32
2611 3003 2.478894 AGCGTACGACAAAGTCAAATGG 59.521 45.455 21.65 0.00 32.09 3.16
2612 3004 2.834689 CGTACGACAAAGTCAAATGGC 58.165 47.619 10.44 0.00 32.09 4.40
2613 3005 2.412325 CGTACGACAAAGTCAAATGGCC 60.412 50.000 10.44 0.00 32.09 5.36
2614 3006 1.686355 ACGACAAAGTCAAATGGCCA 58.314 45.000 8.56 8.56 32.09 5.36
2615 3007 2.238521 ACGACAAAGTCAAATGGCCAT 58.761 42.857 14.09 14.09 32.09 4.40
2616 3008 2.627699 ACGACAAAGTCAAATGGCCATT 59.372 40.909 25.73 25.73 32.09 3.16
2617 3009 3.244976 CGACAAAGTCAAATGGCCATTC 58.755 45.455 30.74 18.46 32.09 2.67
2618 3010 3.588955 GACAAAGTCAAATGGCCATTCC 58.411 45.455 30.74 20.37 32.09 3.01
2619 3011 3.242011 ACAAAGTCAAATGGCCATTCCT 58.758 40.909 30.74 22.12 35.26 3.36
2620 3012 3.259123 ACAAAGTCAAATGGCCATTCCTC 59.741 43.478 30.74 21.31 35.26 3.71
2621 3013 2.149973 AGTCAAATGGCCATTCCTCC 57.850 50.000 30.74 18.03 35.26 4.30
2622 3014 1.358787 AGTCAAATGGCCATTCCTCCA 59.641 47.619 30.74 10.60 36.70 3.86
2623 3015 2.178580 GTCAAATGGCCATTCCTCCAA 58.821 47.619 30.74 10.33 35.75 3.53
2624 3016 2.767960 GTCAAATGGCCATTCCTCCAAT 59.232 45.455 30.74 11.12 35.75 3.16
2625 3017 3.960102 GTCAAATGGCCATTCCTCCAATA 59.040 43.478 30.74 7.97 35.75 1.90
2626 3018 4.405358 GTCAAATGGCCATTCCTCCAATAA 59.595 41.667 30.74 0.00 35.75 1.40
2627 3019 4.650588 TCAAATGGCCATTCCTCCAATAAG 59.349 41.667 30.74 10.70 35.75 1.73
2628 3020 2.071778 TGGCCATTCCTCCAATAAGC 57.928 50.000 0.00 0.00 35.26 3.09
2629 3021 0.954452 GGCCATTCCTCCAATAAGCG 59.046 55.000 0.00 0.00 0.00 4.68
2630 3022 1.680338 GCCATTCCTCCAATAAGCGT 58.320 50.000 0.00 0.00 0.00 5.07
2631 3023 2.024414 GCCATTCCTCCAATAAGCGTT 58.976 47.619 0.00 0.00 0.00 4.84
2632 3024 2.223572 GCCATTCCTCCAATAAGCGTTG 60.224 50.000 0.00 0.00 0.00 4.10
2633 3025 3.278574 CCATTCCTCCAATAAGCGTTGA 58.721 45.455 1.80 0.00 0.00 3.18
2634 3026 3.313526 CCATTCCTCCAATAAGCGTTGAG 59.686 47.826 1.80 0.00 0.00 3.02
2635 3027 2.691409 TCCTCCAATAAGCGTTGAGG 57.309 50.000 0.00 0.00 32.45 3.86
2636 3028 2.184533 TCCTCCAATAAGCGTTGAGGA 58.815 47.619 2.53 2.53 35.24 3.71
2637 3029 2.771943 TCCTCCAATAAGCGTTGAGGAT 59.228 45.455 2.53 0.00 33.98 3.24
2638 3030 2.874701 CCTCCAATAAGCGTTGAGGATG 59.125 50.000 0.00 0.00 32.68 3.51
2639 3031 3.432186 CCTCCAATAAGCGTTGAGGATGA 60.432 47.826 0.00 0.00 32.68 2.92
2640 3032 4.191544 CTCCAATAAGCGTTGAGGATGAA 58.808 43.478 1.80 0.00 0.00 2.57
2641 3033 4.191544 TCCAATAAGCGTTGAGGATGAAG 58.808 43.478 1.80 0.00 0.00 3.02
2642 3034 3.313526 CCAATAAGCGTTGAGGATGAAGG 59.686 47.826 1.80 0.00 0.00 3.46
2643 3035 2.691409 TAAGCGTTGAGGATGAAGGG 57.309 50.000 0.00 0.00 0.00 3.95
2644 3036 0.693049 AAGCGTTGAGGATGAAGGGT 59.307 50.000 0.00 0.00 27.12 4.34
2645 3037 0.693049 AGCGTTGAGGATGAAGGGTT 59.307 50.000 0.00 0.00 0.00 4.11
2646 3038 1.073923 AGCGTTGAGGATGAAGGGTTT 59.926 47.619 0.00 0.00 0.00 3.27
2647 3039 1.886542 GCGTTGAGGATGAAGGGTTTT 59.113 47.619 0.00 0.00 0.00 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 8.974060 TTCTTTTACAACAAAGTCCTCATACT 57.026 30.769 0.00 0.00 35.56 2.12
70 71 0.250597 AGTACTTTTGGGGCCGTCAC 60.251 55.000 0.00 0.00 0.00 3.67
192 196 1.006825 TGACGCCTTCGACATCGTTG 61.007 55.000 0.54 0.00 40.80 4.10
222 226 3.518303 ACCCTAAAAGGCTTGTACTCGAT 59.482 43.478 0.00 0.00 32.73 3.59
328 337 0.388134 TCTGAGCTTGGTAACGACGC 60.388 55.000 0.00 0.00 42.51 5.19
396 408 2.874701 GGTCACATCTGCATCGCTAATT 59.125 45.455 0.00 0.00 0.00 1.40
491 509 4.391830 GCAGTACATCGAAACATGGAAAGA 59.608 41.667 0.00 0.00 0.00 2.52
649 671 3.730061 GCAGCAAAGAGATTCCAACGATG 60.730 47.826 0.00 0.00 0.00 3.84
662 685 8.658609 GCAAATTTCATTATTAAGCAGCAAAGA 58.341 29.630 0.00 0.00 0.00 2.52
663 686 8.662141 AGCAAATTTCATTATTAAGCAGCAAAG 58.338 29.630 0.00 0.00 0.00 2.77
696 719 7.028962 GCCAAAGGGATTCAATTTTATTTTGC 58.971 34.615 0.00 0.00 35.59 3.68
802 836 5.280945 CGTGCATTTCCTTGAAAAAGAGAA 58.719 37.500 0.00 0.00 35.11 2.87
824 861 3.471244 CTTCCCTCGACTAGCGCCG 62.471 68.421 2.29 0.00 40.61 6.46
871 908 7.518188 TGGTAAGTCTTTCTCCAGAATTTTCT 58.482 34.615 0.00 0.00 38.25 2.52
1015 1057 0.033796 CTTGCTCCCACCATCACCAT 60.034 55.000 0.00 0.00 0.00 3.55
1056 1098 1.294857 GCAGATCGAAGAAGAAGGGC 58.705 55.000 0.00 0.00 43.58 5.19
1058 1100 1.932511 GCTGCAGATCGAAGAAGAAGG 59.067 52.381 20.43 0.00 43.58 3.46
1095 1137 2.165380 CACTTGTGGTGGAGCATCG 58.835 57.895 0.00 0.00 41.90 3.84
1266 1308 1.275291 GGTTGGTCATTGAGGACGAGA 59.725 52.381 0.00 0.00 38.70 4.04
1382 1424 4.101790 GGTGTTGCATGGTCCGCG 62.102 66.667 0.00 0.00 0.00 6.46
1455 1497 5.656416 TGTCCTAAGCAATAATTTTCCCTGG 59.344 40.000 0.00 0.00 0.00 4.45
1548 1590 1.212935 AGCCTTAACCCATTCGAGCAT 59.787 47.619 0.00 0.00 0.00 3.79
1556 1598 1.075374 TGAGTGCAAGCCTTAACCCAT 59.925 47.619 0.00 0.00 0.00 4.00
1592 1634 3.241530 TGAAGGCTGCCACGAGGT 61.242 61.111 22.65 0.00 37.19 3.85
1686 1728 4.262635 CCACCATCAAACACTCTGTCTAGT 60.263 45.833 0.00 0.00 0.00 2.57
1687 1729 4.248859 CCACCATCAAACACTCTGTCTAG 58.751 47.826 0.00 0.00 0.00 2.43
1688 1730 3.007940 CCCACCATCAAACACTCTGTCTA 59.992 47.826 0.00 0.00 0.00 2.59
1689 1731 2.224621 CCCACCATCAAACACTCTGTCT 60.225 50.000 0.00 0.00 0.00 3.41
1690 1732 2.154462 CCCACCATCAAACACTCTGTC 58.846 52.381 0.00 0.00 0.00 3.51
1691 1733 1.774254 TCCCACCATCAAACACTCTGT 59.226 47.619 0.00 0.00 0.00 3.41
1692 1734 2.430465 CTCCCACCATCAAACACTCTG 58.570 52.381 0.00 0.00 0.00 3.35
1693 1735 1.271597 GCTCCCACCATCAAACACTCT 60.272 52.381 0.00 0.00 0.00 3.24
1723 1767 1.305287 GAACTAACCCGCCCCCATT 59.695 57.895 0.00 0.00 0.00 3.16
1731 1775 1.350019 ACCCCTCTTTGAACTAACCCG 59.650 52.381 0.00 0.00 0.00 5.28
1732 1776 2.290768 GGACCCCTCTTTGAACTAACCC 60.291 54.545 0.00 0.00 0.00 4.11
1822 2155 8.073768 CGAGAAAATAAAGCAAAAAGGAGTACA 58.926 33.333 0.00 0.00 0.00 2.90
1865 2198 4.780021 AGTCCACAATGATACCTCTCTTGT 59.220 41.667 0.00 0.00 32.03 3.16
1901 2234 6.874134 ACACCGAGCCTTTATATATGTTGATC 59.126 38.462 0.00 0.00 0.00 2.92
1921 2254 6.971756 TGCATCACAATGAAAAATATACACCG 59.028 34.615 0.00 0.00 34.61 4.94
1997 2342 3.810373 CACGTTCTTAAAGCATGACCAC 58.190 45.455 0.00 0.00 0.00 4.16
2047 2415 5.070685 TCTCCGTCTATTATTGCTAGCTGA 58.929 41.667 17.23 4.98 0.00 4.26
2108 2477 9.601217 TTTCTTTTGCAGTAACTCCTATATCTC 57.399 33.333 0.00 0.00 0.00 2.75
2117 2508 6.319141 ACCTCATTTCTTTTGCAGTAACTC 57.681 37.500 0.00 0.00 0.00 3.01
2174 2566 9.261180 CGGTGCTTTATTATTCTTCATCTAAGA 57.739 33.333 0.00 0.00 42.62 2.10
2175 2567 8.499162 CCGGTGCTTTATTATTCTTCATCTAAG 58.501 37.037 0.00 0.00 36.45 2.18
2176 2568 7.444183 CCCGGTGCTTTATTATTCTTCATCTAA 59.556 37.037 0.00 0.00 0.00 2.10
2177 2569 6.934645 CCCGGTGCTTTATTATTCTTCATCTA 59.065 38.462 0.00 0.00 0.00 1.98
2178 2570 5.765182 CCCGGTGCTTTATTATTCTTCATCT 59.235 40.000 0.00 0.00 0.00 2.90
2179 2571 5.048713 CCCCGGTGCTTTATTATTCTTCATC 60.049 44.000 0.00 0.00 0.00 2.92
2180 2572 4.827284 CCCCGGTGCTTTATTATTCTTCAT 59.173 41.667 0.00 0.00 0.00 2.57
2181 2573 4.204012 CCCCGGTGCTTTATTATTCTTCA 58.796 43.478 0.00 0.00 0.00 3.02
2182 2574 3.568430 CCCCCGGTGCTTTATTATTCTTC 59.432 47.826 0.00 0.00 0.00 2.87
2183 2575 3.562182 CCCCCGGTGCTTTATTATTCTT 58.438 45.455 0.00 0.00 0.00 2.52
2184 2576 2.751816 GCCCCCGGTGCTTTATTATTCT 60.752 50.000 0.00 0.00 0.00 2.40
2185 2577 1.611977 GCCCCCGGTGCTTTATTATTC 59.388 52.381 0.00 0.00 0.00 1.75
2186 2578 1.699730 GCCCCCGGTGCTTTATTATT 58.300 50.000 0.00 0.00 0.00 1.40
2187 2579 0.536460 CGCCCCCGGTGCTTTATTAT 60.536 55.000 11.00 0.00 0.00 1.28
2188 2580 1.153127 CGCCCCCGGTGCTTTATTA 60.153 57.895 11.00 0.00 0.00 0.98
2189 2581 2.439519 CGCCCCCGGTGCTTTATT 60.440 61.111 11.00 0.00 0.00 1.40
2199 2591 1.003718 GGAAATCTATCCGCCCCCG 60.004 63.158 0.00 0.00 0.00 5.73
2200 2592 0.036875 CTGGAAATCTATCCGCCCCC 59.963 60.000 0.00 0.00 42.76 5.40
2201 2593 0.606673 GCTGGAAATCTATCCGCCCC 60.607 60.000 0.00 0.00 42.76 5.80
2202 2594 0.108585 TGCTGGAAATCTATCCGCCC 59.891 55.000 0.00 0.00 42.76 6.13
2203 2595 1.070758 TCTGCTGGAAATCTATCCGCC 59.929 52.381 0.00 0.00 42.76 6.13
2204 2596 2.224161 ACTCTGCTGGAAATCTATCCGC 60.224 50.000 0.00 0.00 42.76 5.54
2205 2597 3.742433 ACTCTGCTGGAAATCTATCCG 57.258 47.619 0.00 0.00 42.76 4.18
2206 2598 9.561069 TTATAAAACTCTGCTGGAAATCTATCC 57.439 33.333 0.00 0.00 40.10 2.59
2210 2602 8.743714 CCTTTTATAAAACTCTGCTGGAAATCT 58.256 33.333 6.54 0.00 0.00 2.40
2211 2603 8.523658 ACCTTTTATAAAACTCTGCTGGAAATC 58.476 33.333 13.95 0.00 0.00 2.17
2212 2604 8.306761 CACCTTTTATAAAACTCTGCTGGAAAT 58.693 33.333 13.95 0.00 0.00 2.17
2213 2605 7.657336 CACCTTTTATAAAACTCTGCTGGAAA 58.343 34.615 13.95 0.00 0.00 3.13
2214 2606 6.294508 GCACCTTTTATAAAACTCTGCTGGAA 60.295 38.462 13.95 0.00 0.00 3.53
2215 2607 5.183140 GCACCTTTTATAAAACTCTGCTGGA 59.817 40.000 13.95 0.00 0.00 3.86
2216 2608 5.183904 AGCACCTTTTATAAAACTCTGCTGG 59.816 40.000 20.96 15.17 31.11 4.85
2217 2609 6.088824 CAGCACCTTTTATAAAACTCTGCTG 58.911 40.000 26.40 26.40 37.76 4.41
2218 2610 5.183904 CCAGCACCTTTTATAAAACTCTGCT 59.816 40.000 18.26 18.26 31.81 4.24
2219 2611 5.402398 CCAGCACCTTTTATAAAACTCTGC 58.598 41.667 6.54 12.28 0.00 4.26
2220 2612 5.048083 TGCCAGCACCTTTTATAAAACTCTG 60.048 40.000 6.54 10.36 0.00 3.35
2221 2613 5.076873 TGCCAGCACCTTTTATAAAACTCT 58.923 37.500 6.54 0.00 0.00 3.24
2222 2614 5.385509 TGCCAGCACCTTTTATAAAACTC 57.614 39.130 6.54 0.00 0.00 3.01
2223 2615 7.341769 TGATATGCCAGCACCTTTTATAAAACT 59.658 33.333 6.54 0.29 0.00 2.66
2224 2616 7.488322 TGATATGCCAGCACCTTTTATAAAAC 58.512 34.615 6.54 0.00 0.00 2.43
2225 2617 7.652524 TGATATGCCAGCACCTTTTATAAAA 57.347 32.000 10.16 10.16 0.00 1.52
2226 2618 7.505248 TGATGATATGCCAGCACCTTTTATAAA 59.495 33.333 0.00 0.00 0.00 1.40
2227 2619 7.003482 TGATGATATGCCAGCACCTTTTATAA 58.997 34.615 0.00 0.00 0.00 0.98
2228 2620 6.541907 TGATGATATGCCAGCACCTTTTATA 58.458 36.000 0.00 0.00 0.00 0.98
2229 2621 5.387788 TGATGATATGCCAGCACCTTTTAT 58.612 37.500 0.00 0.00 0.00 1.40
2230 2622 4.790937 TGATGATATGCCAGCACCTTTTA 58.209 39.130 0.00 0.00 0.00 1.52
2231 2623 3.634504 TGATGATATGCCAGCACCTTTT 58.365 40.909 0.00 0.00 0.00 2.27
2232 2624 3.301794 TGATGATATGCCAGCACCTTT 57.698 42.857 0.00 0.00 0.00 3.11
2233 2625 3.301794 TTGATGATATGCCAGCACCTT 57.698 42.857 0.00 0.00 31.61 3.50
2234 2626 3.220110 CTTTGATGATATGCCAGCACCT 58.780 45.455 0.00 0.00 31.61 4.00
2235 2627 2.295349 CCTTTGATGATATGCCAGCACC 59.705 50.000 0.00 0.00 31.61 5.01
2236 2628 2.295349 CCCTTTGATGATATGCCAGCAC 59.705 50.000 0.00 0.00 31.61 4.40
2237 2629 2.589720 CCCTTTGATGATATGCCAGCA 58.410 47.619 0.00 0.00 0.00 4.41
2238 2630 1.891150 CCCCTTTGATGATATGCCAGC 59.109 52.381 0.00 0.00 0.00 4.85
2239 2631 3.513909 TCCCCTTTGATGATATGCCAG 57.486 47.619 0.00 0.00 0.00 4.85
2240 2632 4.474303 AATCCCCTTTGATGATATGCCA 57.526 40.909 0.00 0.00 0.00 4.92
2241 2633 4.562143 GCAAATCCCCTTTGATGATATGCC 60.562 45.833 2.05 0.00 45.96 4.40
2242 2634 4.282703 AGCAAATCCCCTTTGATGATATGC 59.717 41.667 2.05 0.00 45.96 3.14
2243 2635 5.047519 GGAGCAAATCCCCTTTGATGATATG 60.048 44.000 2.05 0.00 43.25 1.78
2244 2636 5.082425 GGAGCAAATCCCCTTTGATGATAT 58.918 41.667 2.05 0.00 43.25 1.63
2245 2637 4.473444 GGAGCAAATCCCCTTTGATGATA 58.527 43.478 2.05 0.00 43.25 2.15
2246 2638 3.303049 GGAGCAAATCCCCTTTGATGAT 58.697 45.455 2.05 0.00 43.25 2.45
2247 2639 2.738743 GGAGCAAATCCCCTTTGATGA 58.261 47.619 2.05 0.00 43.25 2.92
2257 2649 2.167075 CTGGAACATTGGGAGCAAATCC 59.833 50.000 0.00 0.00 43.29 3.01
2258 2650 2.167075 CCTGGAACATTGGGAGCAAATC 59.833 50.000 0.00 0.00 38.20 2.17
2259 2651 2.181975 CCTGGAACATTGGGAGCAAAT 58.818 47.619 0.00 0.00 38.20 2.32
2260 2652 1.146774 TCCTGGAACATTGGGAGCAAA 59.853 47.619 0.00 0.00 38.20 3.68
2261 2653 0.776810 TCCTGGAACATTGGGAGCAA 59.223 50.000 0.00 0.00 38.20 3.91
2262 2654 1.002069 ATCCTGGAACATTGGGAGCA 58.998 50.000 0.00 0.00 38.20 4.26
2263 2655 2.149973 AATCCTGGAACATTGGGAGC 57.850 50.000 0.00 0.00 38.20 4.70
2264 2656 5.009010 CGAATAAATCCTGGAACATTGGGAG 59.991 44.000 0.00 0.00 38.20 4.30
2265 2657 4.887071 CGAATAAATCCTGGAACATTGGGA 59.113 41.667 0.00 0.00 38.20 4.37
2266 2658 4.499696 GCGAATAAATCCTGGAACATTGGG 60.500 45.833 0.00 0.00 38.20 4.12
2267 2659 4.339247 AGCGAATAAATCCTGGAACATTGG 59.661 41.667 0.00 3.53 38.20 3.16
2268 2660 5.276270 CAGCGAATAAATCCTGGAACATTG 58.724 41.667 0.00 0.00 38.20 2.82
2269 2661 4.339247 CCAGCGAATAAATCCTGGAACATT 59.661 41.667 0.00 0.32 43.64 2.71
2270 2662 3.885297 CCAGCGAATAAATCCTGGAACAT 59.115 43.478 0.00 0.00 43.64 2.71
2271 2663 3.278574 CCAGCGAATAAATCCTGGAACA 58.721 45.455 0.00 0.00 43.64 3.18
2272 2664 3.279434 ACCAGCGAATAAATCCTGGAAC 58.721 45.455 12.07 0.00 43.64 3.62
2273 2665 3.054728 TGACCAGCGAATAAATCCTGGAA 60.055 43.478 12.07 0.00 43.64 3.53
2274 2666 2.503765 TGACCAGCGAATAAATCCTGGA 59.496 45.455 12.07 0.00 43.64 3.86
2275 2667 2.874701 CTGACCAGCGAATAAATCCTGG 59.125 50.000 4.11 4.11 45.10 4.45
2276 2668 2.289002 GCTGACCAGCGAATAAATCCTG 59.711 50.000 6.23 0.00 45.29 3.86
2277 2669 2.565841 GCTGACCAGCGAATAAATCCT 58.434 47.619 6.23 0.00 45.29 3.24
2288 2680 6.782670 GTGAAACACTTGAAGCTGACCAGC 62.783 50.000 13.72 13.72 46.24 4.85
2289 2681 2.945008 TGAAACACTTGAAGCTGACCAG 59.055 45.455 0.00 0.00 0.00 4.00
2290 2682 2.682856 GTGAAACACTTGAAGCTGACCA 59.317 45.455 0.00 0.00 36.32 4.02
2291 2683 2.033424 GGTGAAACACTTGAAGCTGACC 59.967 50.000 0.00 0.00 39.98 4.02
2292 2684 2.945668 AGGTGAAACACTTGAAGCTGAC 59.054 45.455 0.00 0.00 39.98 3.51
2293 2685 2.945008 CAGGTGAAACACTTGAAGCTGA 59.055 45.455 7.99 0.00 42.78 4.26
2294 2686 2.945008 TCAGGTGAAACACTTGAAGCTG 59.055 45.455 12.80 5.95 45.05 4.24
2295 2687 3.281727 TCAGGTGAAACACTTGAAGCT 57.718 42.857 12.80 0.00 45.05 3.74
2299 2691 5.420421 TCCAAAATTCAGGTGAAACACTTGA 59.580 36.000 11.51 11.51 46.03 3.02
2300 2692 5.659463 TCCAAAATTCAGGTGAAACACTTG 58.341 37.500 7.51 7.51 41.76 3.16
2301 2693 5.930837 TCCAAAATTCAGGTGAAACACTT 57.069 34.783 0.00 0.00 39.98 3.16
2302 2694 5.395214 GGTTCCAAAATTCAGGTGAAACACT 60.395 40.000 0.00 0.00 39.98 3.55
2303 2695 4.808895 GGTTCCAAAATTCAGGTGAAACAC 59.191 41.667 0.00 0.00 39.98 3.32
2304 2696 4.467795 TGGTTCCAAAATTCAGGTGAAACA 59.532 37.500 0.00 0.00 39.98 2.83
2305 2697 5.017294 TGGTTCCAAAATTCAGGTGAAAC 57.983 39.130 0.00 0.00 37.61 2.78
2306 2698 5.885449 ATGGTTCCAAAATTCAGGTGAAA 57.115 34.783 0.00 0.00 37.61 2.69
2307 2699 5.885449 AATGGTTCCAAAATTCAGGTGAA 57.115 34.783 0.00 0.00 38.56 3.18
2308 2700 6.074648 AGTAATGGTTCCAAAATTCAGGTGA 58.925 36.000 0.00 0.00 0.00 4.02
2309 2701 6.345096 AGTAATGGTTCCAAAATTCAGGTG 57.655 37.500 0.00 0.00 0.00 4.00
2310 2702 6.994421 AAGTAATGGTTCCAAAATTCAGGT 57.006 33.333 0.00 0.00 0.00 4.00
2311 2703 6.147656 GCAAAGTAATGGTTCCAAAATTCAGG 59.852 38.462 0.00 0.00 0.00 3.86
2312 2704 6.930722 AGCAAAGTAATGGTTCCAAAATTCAG 59.069 34.615 0.00 0.00 0.00 3.02
2313 2705 6.825610 AGCAAAGTAATGGTTCCAAAATTCA 58.174 32.000 0.00 0.00 0.00 2.57
2314 2706 6.928492 TGAGCAAAGTAATGGTTCCAAAATTC 59.072 34.615 0.00 0.00 0.00 2.17
2315 2707 6.705825 GTGAGCAAAGTAATGGTTCCAAAATT 59.294 34.615 0.00 0.00 0.00 1.82
2316 2708 6.041979 AGTGAGCAAAGTAATGGTTCCAAAAT 59.958 34.615 0.00 0.00 0.00 1.82
2317 2709 5.362430 AGTGAGCAAAGTAATGGTTCCAAAA 59.638 36.000 0.00 0.00 0.00 2.44
2318 2710 4.892934 AGTGAGCAAAGTAATGGTTCCAAA 59.107 37.500 0.00 0.00 0.00 3.28
2319 2711 4.278170 CAGTGAGCAAAGTAATGGTTCCAA 59.722 41.667 0.00 0.00 0.00 3.53
2320 2712 3.820467 CAGTGAGCAAAGTAATGGTTCCA 59.180 43.478 0.00 0.00 0.00 3.53
2321 2713 4.072131 TCAGTGAGCAAAGTAATGGTTCC 58.928 43.478 0.00 0.00 0.00 3.62
2322 2714 4.997395 TCTCAGTGAGCAAAGTAATGGTTC 59.003 41.667 15.72 0.00 0.00 3.62
2323 2715 4.973168 TCTCAGTGAGCAAAGTAATGGTT 58.027 39.130 15.72 0.00 0.00 3.67
2324 2716 4.623932 TCTCAGTGAGCAAAGTAATGGT 57.376 40.909 15.72 0.00 0.00 3.55
2325 2717 5.947228 TTTCTCAGTGAGCAAAGTAATGG 57.053 39.130 15.72 0.00 0.00 3.16
2326 2718 6.728200 TGTTTTCTCAGTGAGCAAAGTAATG 58.272 36.000 16.81 0.00 26.93 1.90
2327 2719 6.767902 TCTGTTTTCTCAGTGAGCAAAGTAAT 59.232 34.615 16.81 0.00 36.85 1.89
2328 2720 6.112734 TCTGTTTTCTCAGTGAGCAAAGTAA 58.887 36.000 16.81 6.62 36.85 2.24
2329 2721 5.670485 TCTGTTTTCTCAGTGAGCAAAGTA 58.330 37.500 16.81 9.31 36.85 2.24
2330 2722 4.517285 TCTGTTTTCTCAGTGAGCAAAGT 58.483 39.130 16.81 0.00 36.85 2.66
2331 2723 4.024218 CCTCTGTTTTCTCAGTGAGCAAAG 60.024 45.833 16.81 7.82 36.85 2.77
2332 2724 3.879295 CCTCTGTTTTCTCAGTGAGCAAA 59.121 43.478 15.72 14.30 36.85 3.68
2333 2725 3.470709 CCTCTGTTTTCTCAGTGAGCAA 58.529 45.455 15.72 8.30 36.85 3.91
2334 2726 2.808202 GCCTCTGTTTTCTCAGTGAGCA 60.808 50.000 15.72 0.92 36.85 4.26
2335 2727 1.803555 GCCTCTGTTTTCTCAGTGAGC 59.196 52.381 15.72 1.90 36.85 4.26
2336 2728 2.064762 CGCCTCTGTTTTCTCAGTGAG 58.935 52.381 14.36 14.36 36.85 3.51
2337 2729 1.270305 CCGCCTCTGTTTTCTCAGTGA 60.270 52.381 0.00 0.00 36.85 3.41
2338 2730 1.151668 CCGCCTCTGTTTTCTCAGTG 58.848 55.000 0.00 0.00 36.85 3.66
2339 2731 0.759346 ACCGCCTCTGTTTTCTCAGT 59.241 50.000 0.00 0.00 36.85 3.41
2340 2732 2.338500 GTACCGCCTCTGTTTTCTCAG 58.662 52.381 0.00 0.00 36.85 3.35
2341 2733 1.336517 CGTACCGCCTCTGTTTTCTCA 60.337 52.381 0.00 0.00 0.00 3.27
2342 2734 1.068055 TCGTACCGCCTCTGTTTTCTC 60.068 52.381 0.00 0.00 0.00 2.87
2343 2735 0.963962 TCGTACCGCCTCTGTTTTCT 59.036 50.000 0.00 0.00 0.00 2.52
2344 2736 1.787012 TTCGTACCGCCTCTGTTTTC 58.213 50.000 0.00 0.00 0.00 2.29
2345 2737 2.467566 ATTCGTACCGCCTCTGTTTT 57.532 45.000 0.00 0.00 0.00 2.43
2346 2738 2.073816 CAATTCGTACCGCCTCTGTTT 58.926 47.619 0.00 0.00 0.00 2.83
2347 2739 1.274167 TCAATTCGTACCGCCTCTGTT 59.726 47.619 0.00 0.00 0.00 3.16
2348 2740 0.892755 TCAATTCGTACCGCCTCTGT 59.107 50.000 0.00 0.00 0.00 3.41
2349 2741 1.560923 CTCAATTCGTACCGCCTCTG 58.439 55.000 0.00 0.00 0.00 3.35
2350 2742 0.179108 GCTCAATTCGTACCGCCTCT 60.179 55.000 0.00 0.00 0.00 3.69
2351 2743 0.459585 TGCTCAATTCGTACCGCCTC 60.460 55.000 0.00 0.00 0.00 4.70
2352 2744 0.460284 CTGCTCAATTCGTACCGCCT 60.460 55.000 0.00 0.00 0.00 5.52
2353 2745 0.739813 ACTGCTCAATTCGTACCGCC 60.740 55.000 0.00 0.00 0.00 6.13
2354 2746 1.060698 GAACTGCTCAATTCGTACCGC 59.939 52.381 0.00 0.00 0.00 5.68
2355 2747 2.333926 TGAACTGCTCAATTCGTACCG 58.666 47.619 0.00 0.00 0.00 4.02
2356 2748 3.368236 GTCTGAACTGCTCAATTCGTACC 59.632 47.826 0.00 0.00 32.17 3.34
2357 2749 3.368236 GGTCTGAACTGCTCAATTCGTAC 59.632 47.826 0.00 0.00 32.17 3.67
2358 2750 3.585862 GGTCTGAACTGCTCAATTCGTA 58.414 45.455 0.00 0.00 32.17 3.43
2359 2751 2.417719 GGTCTGAACTGCTCAATTCGT 58.582 47.619 0.00 0.00 32.17 3.85
2360 2752 1.734465 GGGTCTGAACTGCTCAATTCG 59.266 52.381 0.00 0.00 32.17 3.34
2361 2753 2.783135 TGGGTCTGAACTGCTCAATTC 58.217 47.619 0.00 0.00 32.17 2.17
2362 2754 2.957402 TGGGTCTGAACTGCTCAATT 57.043 45.000 0.00 0.00 32.17 2.32
2363 2755 2.575279 AGATGGGTCTGAACTGCTCAAT 59.425 45.455 0.00 0.00 32.17 2.57
2364 2756 1.980765 AGATGGGTCTGAACTGCTCAA 59.019 47.619 0.00 0.00 32.17 3.02
2365 2757 1.649321 AGATGGGTCTGAACTGCTCA 58.351 50.000 0.00 0.00 32.13 4.26
2366 2758 3.640967 AGATAGATGGGTCTGAACTGCTC 59.359 47.826 0.00 0.00 35.87 4.26
2367 2759 3.652055 AGATAGATGGGTCTGAACTGCT 58.348 45.455 0.00 0.00 35.87 4.24
2368 2760 4.100808 AGAAGATAGATGGGTCTGAACTGC 59.899 45.833 0.00 0.00 35.87 4.40
2369 2761 5.362143 TCAGAAGATAGATGGGTCTGAACTG 59.638 44.000 0.00 0.00 41.22 3.16
2370 2762 5.523588 TCAGAAGATAGATGGGTCTGAACT 58.476 41.667 0.00 0.00 41.22 3.01
2371 2763 5.860941 TCAGAAGATAGATGGGTCTGAAC 57.139 43.478 0.00 0.00 41.22 3.18
2373 2765 6.380414 AGATTCAGAAGATAGATGGGTCTGA 58.620 40.000 0.00 0.00 42.17 3.27
2374 2766 6.669125 AGATTCAGAAGATAGATGGGTCTG 57.331 41.667 0.00 0.00 37.62 3.51
2375 2767 8.010105 ACTTAGATTCAGAAGATAGATGGGTCT 58.990 37.037 5.60 0.00 38.52 3.85
2376 2768 8.189119 ACTTAGATTCAGAAGATAGATGGGTC 57.811 38.462 5.60 0.00 0.00 4.46
2377 2769 8.560124 AACTTAGATTCAGAAGATAGATGGGT 57.440 34.615 5.60 0.00 0.00 4.51
2378 2770 9.487790 GAAACTTAGATTCAGAAGATAGATGGG 57.512 37.037 0.00 0.00 0.00 4.00
2399 2791 9.119418 CCCAACCTTGATAAAAATTTTGAAACT 57.881 29.630 3.73 0.00 0.00 2.66
2400 2792 9.114952 TCCCAACCTTGATAAAAATTTTGAAAC 57.885 29.630 3.73 0.00 0.00 2.78
2401 2793 9.114952 GTCCCAACCTTGATAAAAATTTTGAAA 57.885 29.630 3.73 0.00 0.00 2.69
2402 2794 8.267894 TGTCCCAACCTTGATAAAAATTTTGAA 58.732 29.630 3.73 0.00 0.00 2.69
2403 2795 7.796054 TGTCCCAACCTTGATAAAAATTTTGA 58.204 30.769 3.73 0.00 0.00 2.69
2404 2796 8.443953 TTGTCCCAACCTTGATAAAAATTTTG 57.556 30.769 3.73 0.00 0.00 2.44
2405 2797 9.639563 ATTTGTCCCAACCTTGATAAAAATTTT 57.360 25.926 0.00 0.00 0.00 1.82
2407 2799 9.942850 CTATTTGTCCCAACCTTGATAAAAATT 57.057 29.630 0.00 0.00 0.00 1.82
2408 2800 9.320295 TCTATTTGTCCCAACCTTGATAAAAAT 57.680 29.630 0.00 0.00 0.00 1.82
2409 2801 8.581578 GTCTATTTGTCCCAACCTTGATAAAAA 58.418 33.333 0.00 0.00 0.00 1.94
2410 2802 7.947890 AGTCTATTTGTCCCAACCTTGATAAAA 59.052 33.333 0.00 0.00 0.00 1.52
2411 2803 7.466804 AGTCTATTTGTCCCAACCTTGATAAA 58.533 34.615 0.00 0.00 0.00 1.40
2412 2804 7.027874 AGTCTATTTGTCCCAACCTTGATAA 57.972 36.000 0.00 0.00 0.00 1.75
2413 2805 6.214615 TGAGTCTATTTGTCCCAACCTTGATA 59.785 38.462 0.00 0.00 0.00 2.15
2414 2806 5.014123 TGAGTCTATTTGTCCCAACCTTGAT 59.986 40.000 0.00 0.00 0.00 2.57
2415 2807 4.349636 TGAGTCTATTTGTCCCAACCTTGA 59.650 41.667 0.00 0.00 0.00 3.02
2416 2808 4.455877 GTGAGTCTATTTGTCCCAACCTTG 59.544 45.833 0.00 0.00 0.00 3.61
2417 2809 4.104102 TGTGAGTCTATTTGTCCCAACCTT 59.896 41.667 0.00 0.00 0.00 3.50
2418 2810 3.650942 TGTGAGTCTATTTGTCCCAACCT 59.349 43.478 0.00 0.00 0.00 3.50
2419 2811 3.751698 GTGTGAGTCTATTTGTCCCAACC 59.248 47.826 0.00 0.00 0.00 3.77
2420 2812 4.385825 TGTGTGAGTCTATTTGTCCCAAC 58.614 43.478 0.00 0.00 0.00 3.77
2421 2813 4.346709 TCTGTGTGAGTCTATTTGTCCCAA 59.653 41.667 0.00 0.00 0.00 4.12
2422 2814 3.901222 TCTGTGTGAGTCTATTTGTCCCA 59.099 43.478 0.00 0.00 0.00 4.37
2423 2815 4.537135 TCTGTGTGAGTCTATTTGTCCC 57.463 45.455 0.00 0.00 0.00 4.46
2424 2816 5.163814 GCAATCTGTGTGAGTCTATTTGTCC 60.164 44.000 0.00 0.00 0.00 4.02
2425 2817 5.445142 CGCAATCTGTGTGAGTCTATTTGTC 60.445 44.000 0.00 0.00 40.42 3.18
2426 2818 4.389992 CGCAATCTGTGTGAGTCTATTTGT 59.610 41.667 0.00 0.00 40.42 2.83
2427 2819 4.726021 GCGCAATCTGTGTGAGTCTATTTG 60.726 45.833 0.30 0.00 40.42 2.32
2428 2820 3.372206 GCGCAATCTGTGTGAGTCTATTT 59.628 43.478 0.30 0.00 40.42 1.40
2429 2821 2.932614 GCGCAATCTGTGTGAGTCTATT 59.067 45.455 0.30 0.00 40.42 1.73
2430 2822 2.094026 TGCGCAATCTGTGTGAGTCTAT 60.094 45.455 8.16 0.00 40.42 1.98
2431 2823 1.272212 TGCGCAATCTGTGTGAGTCTA 59.728 47.619 8.16 0.00 40.42 2.59
2432 2824 0.033920 TGCGCAATCTGTGTGAGTCT 59.966 50.000 8.16 0.00 40.42 3.24
2433 2825 1.081892 ATGCGCAATCTGTGTGAGTC 58.918 50.000 17.11 0.00 40.42 3.36
2434 2826 1.466167 GAATGCGCAATCTGTGTGAGT 59.534 47.619 17.11 0.00 40.42 3.41
2435 2827 1.736126 AGAATGCGCAATCTGTGTGAG 59.264 47.619 26.54 0.00 40.42 3.51
2436 2828 1.465777 CAGAATGCGCAATCTGTGTGA 59.534 47.619 36.34 3.16 40.42 3.58
2437 2829 1.891178 CAGAATGCGCAATCTGTGTG 58.109 50.000 36.34 19.57 38.57 3.82
2441 2833 0.806868 ACCACAGAATGCGCAATCTG 59.193 50.000 40.34 40.34 46.69 2.90
2442 2834 0.806868 CACCACAGAATGCGCAATCT 59.193 50.000 22.13 22.13 42.53 2.40
2443 2835 0.799534 GCACCACAGAATGCGCAATC 60.800 55.000 17.11 17.50 42.53 2.67
2444 2836 1.213537 GCACCACAGAATGCGCAAT 59.786 52.632 17.11 5.60 42.53 3.56
2445 2837 2.192187 TGCACCACAGAATGCGCAA 61.192 52.632 17.11 0.00 45.13 4.85
2446 2838 2.594013 TGCACCACAGAATGCGCA 60.594 55.556 14.96 14.96 45.13 6.09
2456 2848 4.947147 TTGGGACGGCTGCACCAC 62.947 66.667 8.22 0.83 39.03 4.16
2457 2849 2.992817 AATTTGGGACGGCTGCACCA 62.993 55.000 0.50 4.75 39.03 4.17
2458 2850 2.275380 AATTTGGGACGGCTGCACC 61.275 57.895 0.50 1.45 0.00 5.01
2459 2851 1.080569 CAATTTGGGACGGCTGCAC 60.081 57.895 0.50 0.00 0.00 4.57
2460 2852 2.929903 GCAATTTGGGACGGCTGCA 61.930 57.895 0.50 0.00 0.00 4.41
2461 2853 2.125952 GCAATTTGGGACGGCTGC 60.126 61.111 0.00 0.00 0.00 5.25
2462 2854 0.318120 AAAGCAATTTGGGACGGCTG 59.682 50.000 0.00 0.00 34.56 4.85
2463 2855 0.603065 GAAAGCAATTTGGGACGGCT 59.397 50.000 0.00 0.00 36.13 5.52
2464 2856 0.316841 TGAAAGCAATTTGGGACGGC 59.683 50.000 0.00 0.00 0.00 5.68
2465 2857 2.609350 CATGAAAGCAATTTGGGACGG 58.391 47.619 0.00 0.00 0.00 4.79
2466 2858 1.994779 GCATGAAAGCAATTTGGGACG 59.005 47.619 0.00 0.00 0.00 4.79
2467 2859 2.349590 GGCATGAAAGCAATTTGGGAC 58.650 47.619 0.00 0.00 35.83 4.46
2468 2860 1.067000 CGGCATGAAAGCAATTTGGGA 60.067 47.619 0.00 0.00 35.83 4.37
2469 2861 1.361793 CGGCATGAAAGCAATTTGGG 58.638 50.000 0.00 0.00 35.83 4.12
2470 2862 1.067000 TCCGGCATGAAAGCAATTTGG 60.067 47.619 0.00 0.00 35.83 3.28
2471 2863 2.367030 TCCGGCATGAAAGCAATTTG 57.633 45.000 0.00 0.00 35.83 2.32
2472 2864 3.953612 TCTATCCGGCATGAAAGCAATTT 59.046 39.130 0.00 0.00 35.83 1.82
2473 2865 3.554934 TCTATCCGGCATGAAAGCAATT 58.445 40.909 0.00 0.00 35.83 2.32
2474 2866 3.213206 TCTATCCGGCATGAAAGCAAT 57.787 42.857 0.00 0.00 35.83 3.56
2475 2867 2.708216 TCTATCCGGCATGAAAGCAA 57.292 45.000 0.00 0.00 35.83 3.91
2476 2868 2.682856 GTTTCTATCCGGCATGAAAGCA 59.317 45.455 13.22 0.00 35.83 3.91
2477 2869 2.682856 TGTTTCTATCCGGCATGAAAGC 59.317 45.455 13.22 10.03 0.00 3.51
2478 2870 4.023707 GGATGTTTCTATCCGGCATGAAAG 60.024 45.833 13.22 0.00 37.48 2.62
2479 2871 3.882888 GGATGTTTCTATCCGGCATGAAA 59.117 43.478 0.00 3.98 37.48 2.69
2480 2872 3.476552 GGATGTTTCTATCCGGCATGAA 58.523 45.455 0.00 0.00 37.48 2.57
2481 2873 3.126001 GGATGTTTCTATCCGGCATGA 57.874 47.619 0.00 0.00 37.48 3.07
2488 2880 5.828328 CACCCCTTTAAGGATGTTTCTATCC 59.172 44.000 13.36 0.00 45.71 2.59
2489 2881 5.828328 CCACCCCTTTAAGGATGTTTCTATC 59.172 44.000 13.36 0.00 37.67 2.08
2490 2882 5.255443 ACCACCCCTTTAAGGATGTTTCTAT 59.745 40.000 13.36 0.00 37.67 1.98
2491 2883 4.604490 ACCACCCCTTTAAGGATGTTTCTA 59.396 41.667 13.36 0.00 37.67 2.10
2492 2884 3.401342 ACCACCCCTTTAAGGATGTTTCT 59.599 43.478 13.36 0.00 37.67 2.52
2493 2885 3.509967 CACCACCCCTTTAAGGATGTTTC 59.490 47.826 13.36 0.00 37.67 2.78
2494 2886 3.506398 CACCACCCCTTTAAGGATGTTT 58.494 45.455 13.36 0.00 37.67 2.83
2495 2887 2.225267 CCACCACCCCTTTAAGGATGTT 60.225 50.000 13.36 0.00 37.67 2.71
2496 2888 1.357761 CCACCACCCCTTTAAGGATGT 59.642 52.381 13.36 6.45 37.67 3.06
2497 2889 1.357761 ACCACCACCCCTTTAAGGATG 59.642 52.381 13.36 10.09 37.67 3.51
2498 2890 1.639108 GACCACCACCCCTTTAAGGAT 59.361 52.381 13.36 0.00 37.67 3.24
2499 2891 1.069775 GACCACCACCCCTTTAAGGA 58.930 55.000 13.36 0.00 37.67 3.36
2500 2892 1.073098 AGACCACCACCCCTTTAAGG 58.927 55.000 3.57 3.57 34.30 2.69
2501 2893 2.514803 CAAGACCACCACCCCTTTAAG 58.485 52.381 0.00 0.00 0.00 1.85
2502 2894 1.479757 GCAAGACCACCACCCCTTTAA 60.480 52.381 0.00 0.00 0.00 1.52
2503 2895 0.111639 GCAAGACCACCACCCCTTTA 59.888 55.000 0.00 0.00 0.00 1.85
2504 2896 1.152546 GCAAGACCACCACCCCTTT 60.153 57.895 0.00 0.00 0.00 3.11
2505 2897 1.729267 ATGCAAGACCACCACCCCTT 61.729 55.000 0.00 0.00 0.00 3.95
2506 2898 2.162906 ATGCAAGACCACCACCCCT 61.163 57.895 0.00 0.00 0.00 4.79
2507 2899 1.978617 CATGCAAGACCACCACCCC 60.979 63.158 0.00 0.00 0.00 4.95
2508 2900 0.539438 TTCATGCAAGACCACCACCC 60.539 55.000 0.00 0.00 0.00 4.61
2509 2901 1.000274 GTTTCATGCAAGACCACCACC 60.000 52.381 0.00 0.00 0.00 4.61
2510 2902 1.334960 CGTTTCATGCAAGACCACCAC 60.335 52.381 0.00 0.00 0.00 4.16
2511 2903 0.950836 CGTTTCATGCAAGACCACCA 59.049 50.000 0.00 0.00 0.00 4.17
2512 2904 0.387239 GCGTTTCATGCAAGACCACC 60.387 55.000 0.00 0.00 0.00 4.61
2513 2905 0.593128 AGCGTTTCATGCAAGACCAC 59.407 50.000 0.00 0.00 31.07 4.16
2514 2906 0.874390 GAGCGTTTCATGCAAGACCA 59.126 50.000 0.00 0.00 31.07 4.02
2515 2907 0.169009 GGAGCGTTTCATGCAAGACC 59.831 55.000 0.00 0.00 31.07 3.85
2516 2908 0.874390 TGGAGCGTTTCATGCAAGAC 59.126 50.000 0.00 0.00 31.07 3.01
2517 2909 1.469703 CATGGAGCGTTTCATGCAAGA 59.530 47.619 7.67 0.00 35.07 3.02
2518 2910 1.469703 TCATGGAGCGTTTCATGCAAG 59.530 47.619 15.24 0.00 40.20 4.01
2519 2911 1.532523 TCATGGAGCGTTTCATGCAA 58.467 45.000 15.24 0.00 40.20 4.08
2520 2912 1.532523 TTCATGGAGCGTTTCATGCA 58.467 45.000 15.24 1.93 40.20 3.96
2521 2913 2.634982 TTTCATGGAGCGTTTCATGC 57.365 45.000 15.24 0.00 40.20 4.06
2522 2914 3.129113 TGGATTTCATGGAGCGTTTCATG 59.871 43.478 14.00 14.00 41.35 3.07
2523 2915 3.355378 TGGATTTCATGGAGCGTTTCAT 58.645 40.909 0.00 0.00 0.00 2.57
2524 2916 2.789213 TGGATTTCATGGAGCGTTTCA 58.211 42.857 0.00 0.00 0.00 2.69
2525 2917 4.552767 CGTATGGATTTCATGGAGCGTTTC 60.553 45.833 0.00 0.00 37.30 2.78
2526 2918 3.312421 CGTATGGATTTCATGGAGCGTTT 59.688 43.478 0.00 0.00 37.30 3.60
2527 2919 2.872245 CGTATGGATTTCATGGAGCGTT 59.128 45.455 0.00 0.00 37.30 4.84
2528 2920 2.102420 TCGTATGGATTTCATGGAGCGT 59.898 45.455 0.00 0.00 37.30 5.07
2529 2921 2.754472 TCGTATGGATTTCATGGAGCG 58.246 47.619 0.00 0.00 37.30 5.03
2530 2922 5.499139 TTTTCGTATGGATTTCATGGAGC 57.501 39.130 0.00 0.00 37.30 4.70
2550 2942 8.541899 TTTGAAAACTACCCCATCTAGTTTTT 57.458 30.769 14.41 0.00 46.91 1.94
2552 2944 7.230712 CACTTTGAAAACTACCCCATCTAGTTT 59.769 37.037 0.00 0.00 43.31 2.66
2553 2945 6.715264 CACTTTGAAAACTACCCCATCTAGTT 59.285 38.462 0.00 0.00 36.23 2.24
2554 2946 6.238648 CACTTTGAAAACTACCCCATCTAGT 58.761 40.000 0.00 0.00 0.00 2.57
2555 2947 5.648092 CCACTTTGAAAACTACCCCATCTAG 59.352 44.000 0.00 0.00 0.00 2.43
2556 2948 5.311121 TCCACTTTGAAAACTACCCCATCTA 59.689 40.000 0.00 0.00 0.00 1.98
2557 2949 4.105697 TCCACTTTGAAAACTACCCCATCT 59.894 41.667 0.00 0.00 0.00 2.90
2558 2950 4.403734 TCCACTTTGAAAACTACCCCATC 58.596 43.478 0.00 0.00 0.00 3.51
2559 2951 4.463050 TCCACTTTGAAAACTACCCCAT 57.537 40.909 0.00 0.00 0.00 4.00
2560 2952 3.955524 TCCACTTTGAAAACTACCCCA 57.044 42.857 0.00 0.00 0.00 4.96
2561 2953 5.564063 CGAAATCCACTTTGAAAACTACCCC 60.564 44.000 0.00 0.00 0.00 4.95
2562 2954 5.239963 TCGAAATCCACTTTGAAAACTACCC 59.760 40.000 0.00 0.00 0.00 3.69
2563 2955 6.308371 TCGAAATCCACTTTGAAAACTACC 57.692 37.500 0.00 0.00 0.00 3.18
2564 2956 8.623310 TTTTCGAAATCCACTTTGAAAACTAC 57.377 30.769 12.12 0.00 33.68 2.73
2565 2957 9.296400 CTTTTTCGAAATCCACTTTGAAAACTA 57.704 29.630 12.12 0.00 35.72 2.24
2566 2958 7.201522 GCTTTTTCGAAATCCACTTTGAAAACT 60.202 33.333 12.12 0.00 35.72 2.66
2567 2959 6.899771 GCTTTTTCGAAATCCACTTTGAAAAC 59.100 34.615 12.12 0.00 35.72 2.43
2568 2960 6.237701 CGCTTTTTCGAAATCCACTTTGAAAA 60.238 34.615 12.12 7.19 35.05 2.29
2569 2961 5.231147 CGCTTTTTCGAAATCCACTTTGAAA 59.769 36.000 12.12 0.00 0.00 2.69
2570 2962 4.737765 CGCTTTTTCGAAATCCACTTTGAA 59.262 37.500 12.12 0.00 0.00 2.69
2571 2963 4.201970 ACGCTTTTTCGAAATCCACTTTGA 60.202 37.500 12.12 0.00 0.00 2.69
2572 2964 4.041723 ACGCTTTTTCGAAATCCACTTTG 58.958 39.130 12.12 0.00 0.00 2.77
2573 2965 4.301637 ACGCTTTTTCGAAATCCACTTT 57.698 36.364 12.12 0.00 0.00 2.66
2574 2966 3.982576 ACGCTTTTTCGAAATCCACTT 57.017 38.095 12.12 0.00 0.00 3.16
2575 2967 3.120786 CGTACGCTTTTTCGAAATCCACT 60.121 43.478 12.12 0.00 0.00 4.00
2576 2968 3.120923 TCGTACGCTTTTTCGAAATCCAC 60.121 43.478 12.12 3.89 0.00 4.02
2577 2969 3.058450 TCGTACGCTTTTTCGAAATCCA 58.942 40.909 12.12 0.00 0.00 3.41
2578 2970 3.120923 TGTCGTACGCTTTTTCGAAATCC 60.121 43.478 12.12 2.40 34.23 3.01
2579 2971 4.043761 TGTCGTACGCTTTTTCGAAATC 57.956 40.909 12.12 3.55 34.23 2.17
2580 2972 4.455917 TTGTCGTACGCTTTTTCGAAAT 57.544 36.364 12.12 0.00 34.23 2.17
2581 2973 3.921969 TTGTCGTACGCTTTTTCGAAA 57.078 38.095 11.24 6.47 34.23 3.46
2582 2974 3.306703 ACTTTGTCGTACGCTTTTTCGAA 59.693 39.130 11.24 0.00 34.23 3.71
2583 2975 2.859538 ACTTTGTCGTACGCTTTTTCGA 59.140 40.909 11.24 0.00 0.00 3.71
2584 2976 3.205089 GACTTTGTCGTACGCTTTTTCG 58.795 45.455 11.24 0.00 0.00 3.46
2585 2977 4.186241 TGACTTTGTCGTACGCTTTTTC 57.814 40.909 11.24 3.21 34.95 2.29
2586 2978 4.603231 TTGACTTTGTCGTACGCTTTTT 57.397 36.364 11.24 0.00 34.95 1.94
2587 2979 4.603231 TTTGACTTTGTCGTACGCTTTT 57.397 36.364 11.24 0.00 34.95 2.27
2588 2980 4.523813 CATTTGACTTTGTCGTACGCTTT 58.476 39.130 11.24 0.00 34.95 3.51
2589 2981 3.059188 CCATTTGACTTTGTCGTACGCTT 60.059 43.478 11.24 0.00 34.95 4.68
2590 2982 2.478894 CCATTTGACTTTGTCGTACGCT 59.521 45.455 11.24 0.00 34.95 5.07
2591 2983 2.834689 CCATTTGACTTTGTCGTACGC 58.165 47.619 11.24 6.57 34.95 4.42
2592 2984 2.412325 GGCCATTTGACTTTGTCGTACG 60.412 50.000 9.53 9.53 34.95 3.67
2593 2985 2.550606 TGGCCATTTGACTTTGTCGTAC 59.449 45.455 0.00 0.00 34.95 3.67
2594 2986 2.852449 TGGCCATTTGACTTTGTCGTA 58.148 42.857 0.00 0.00 34.95 3.43
2595 2987 1.686355 TGGCCATTTGACTTTGTCGT 58.314 45.000 0.00 0.00 34.95 4.34
2596 2988 3.244976 GAATGGCCATTTGACTTTGTCG 58.755 45.455 31.13 0.00 34.95 4.35
2597 2989 3.259123 AGGAATGGCCATTTGACTTTGTC 59.741 43.478 31.13 15.32 40.02 3.18
2598 2990 3.242011 AGGAATGGCCATTTGACTTTGT 58.758 40.909 31.13 6.44 40.02 2.83
2599 2991 3.368739 GGAGGAATGGCCATTTGACTTTG 60.369 47.826 31.13 0.00 40.02 2.77
2600 2992 2.833943 GGAGGAATGGCCATTTGACTTT 59.166 45.455 31.13 8.99 40.02 2.66
2601 2993 2.225343 TGGAGGAATGGCCATTTGACTT 60.225 45.455 31.13 15.60 40.02 3.01
2602 2994 1.358787 TGGAGGAATGGCCATTTGACT 59.641 47.619 31.13 26.53 40.02 3.41
2603 2995 1.851304 TGGAGGAATGGCCATTTGAC 58.149 50.000 31.13 22.77 40.02 3.18
2604 2996 2.619697 TTGGAGGAATGGCCATTTGA 57.380 45.000 31.13 11.40 40.02 2.69
2605 2997 4.741536 GCTTATTGGAGGAATGGCCATTTG 60.742 45.833 31.13 12.21 40.02 2.32
2606 2998 3.389002 GCTTATTGGAGGAATGGCCATTT 59.611 43.478 31.13 17.37 40.02 2.32
2607 2999 2.967887 GCTTATTGGAGGAATGGCCATT 59.032 45.455 31.09 31.09 40.02 3.16
2608 3000 2.601905 GCTTATTGGAGGAATGGCCAT 58.398 47.619 14.09 14.09 40.02 4.40
2609 3001 1.750332 CGCTTATTGGAGGAATGGCCA 60.750 52.381 8.56 8.56 40.02 5.36
2610 3002 0.954452 CGCTTATTGGAGGAATGGCC 59.046 55.000 0.00 0.00 0.00 5.36
2611 3003 1.680338 ACGCTTATTGGAGGAATGGC 58.320 50.000 0.00 0.00 0.00 4.40
2612 3004 3.278574 TCAACGCTTATTGGAGGAATGG 58.721 45.455 0.00 0.00 0.00 3.16
2613 3005 3.313526 CCTCAACGCTTATTGGAGGAATG 59.686 47.826 0.00 0.00 32.77 2.67
2614 3006 3.199946 TCCTCAACGCTTATTGGAGGAAT 59.800 43.478 6.24 0.00 35.13 3.01
2615 3007 2.569853 TCCTCAACGCTTATTGGAGGAA 59.430 45.455 6.24 0.00 35.13 3.36
2616 3008 2.184533 TCCTCAACGCTTATTGGAGGA 58.815 47.619 4.66 4.66 35.41 3.71
2617 3009 2.691409 TCCTCAACGCTTATTGGAGG 57.309 50.000 0.00 0.00 32.52 4.30
2618 3010 3.797039 TCATCCTCAACGCTTATTGGAG 58.203 45.455 0.00 0.00 0.00 3.86
2619 3011 3.904800 TCATCCTCAACGCTTATTGGA 57.095 42.857 0.00 0.00 0.00 3.53
2620 3012 3.313526 CCTTCATCCTCAACGCTTATTGG 59.686 47.826 0.00 0.00 0.00 3.16
2621 3013 3.313526 CCCTTCATCCTCAACGCTTATTG 59.686 47.826 0.00 0.00 0.00 1.90
2622 3014 3.054361 ACCCTTCATCCTCAACGCTTATT 60.054 43.478 0.00 0.00 0.00 1.40
2623 3015 2.505819 ACCCTTCATCCTCAACGCTTAT 59.494 45.455 0.00 0.00 0.00 1.73
2624 3016 1.906574 ACCCTTCATCCTCAACGCTTA 59.093 47.619 0.00 0.00 0.00 3.09
2625 3017 0.693049 ACCCTTCATCCTCAACGCTT 59.307 50.000 0.00 0.00 0.00 4.68
2626 3018 0.693049 AACCCTTCATCCTCAACGCT 59.307 50.000 0.00 0.00 0.00 5.07
2627 3019 1.534729 AAACCCTTCATCCTCAACGC 58.465 50.000 0.00 0.00 0.00 4.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.