Multiple sequence alignment - TraesCS3B01G029000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G029000 chr3B 100.000 5596 0 0 1 5596 12471486 12477081 0.000000e+00 10334.0
1 TraesCS3B01G029000 chr3B 95.291 4375 141 17 385 4714 12843701 12839347 0.000000e+00 6878.0
2 TraesCS3B01G029000 chr3B 85.046 2180 249 30 928 3069 12933370 12935510 0.000000e+00 2148.0
3 TraesCS3B01G029000 chr3B 84.869 2214 243 43 928 3069 13245986 13248179 0.000000e+00 2148.0
4 TraesCS3B01G029000 chr3B 86.872 1592 154 28 3117 4683 13248157 13249718 0.000000e+00 1731.0
5 TraesCS3B01G029000 chr3B 85.678 1585 189 25 3113 4672 12935484 12937055 0.000000e+00 1635.0
6 TraesCS3B01G029000 chr3B 82.787 1220 170 23 1711 2897 13413561 13414773 0.000000e+00 1053.0
7 TraesCS3B01G029000 chr3B 93.782 579 24 3 5018 5596 12837679 12837113 0.000000e+00 859.0
8 TraesCS3B01G029000 chr3B 86.328 256 24 7 4769 5014 13249727 13249981 9.240000e-68 268.0
9 TraesCS3B01G029000 chr3B 89.865 148 7 1 4877 5016 12839161 12839308 3.440000e-42 183.0
10 TraesCS3B01G029000 chr3B 95.918 98 4 0 4716 4813 12839404 12839307 5.800000e-35 159.0
11 TraesCS3B01G029000 chr3B 89.524 105 11 0 4775 4879 13416612 13416716 3.520000e-27 134.0
12 TraesCS3B01G029000 chr3B 95.652 69 2 1 4814 4882 12837680 12837747 5.930000e-20 110.0
13 TraesCS3B01G029000 chr3B 98.276 58 1 0 4716 4773 12476142 12476199 9.920000e-18 102.0
14 TraesCS3B01G029000 chr3B 98.276 58 1 0 4657 4714 12476201 12476258 9.920000e-18 102.0
15 TraesCS3B01G029000 chr3B 93.182 44 2 1 3068 3110 93262777 93262820 4.680000e-06 63.9
16 TraesCS3B01G029000 chr3B 90.698 43 3 1 3072 3113 746796410 746796368 7.830000e-04 56.5
17 TraesCS3B01G029000 chr3D 95.414 4361 152 15 386 4714 41597340 41592996 0.000000e+00 6902.0
18 TraesCS3B01G029000 chr3D 93.644 3949 201 23 787 4695 41427235 41423297 0.000000e+00 5856.0
19 TraesCS3B01G029000 chr3D 83.577 2253 282 44 727 2900 5410513 5408270 0.000000e+00 2030.0
20 TraesCS3B01G029000 chr3D 83.724 2175 275 33 925 3048 5328558 5330704 0.000000e+00 1982.0
21 TraesCS3B01G029000 chr3D 83.318 2146 273 39 973 3046 5376602 5374470 0.000000e+00 1901.0
22 TraesCS3B01G029000 chr3D 96.521 891 17 5 4716 5596 41593053 41592167 0.000000e+00 1461.0
23 TraesCS3B01G029000 chr3D 87.055 1012 119 10 3666 4672 5407458 5406454 0.000000e+00 1133.0
24 TraesCS3B01G029000 chr3D 84.663 489 62 9 3132 3614 5374469 5373988 5.070000e-130 475.0
25 TraesCS3B01G029000 chr3D 81.907 514 64 12 3113 3608 5408054 5407552 1.880000e-109 407.0
26 TraesCS3B01G029000 chr3D 93.182 88 6 0 4778 4865 41423012 41422925 4.550000e-26 130.0
27 TraesCS3B01G029000 chr3D 91.026 78 5 1 5354 5431 41421415 41421340 2.760000e-18 104.0
28 TraesCS3B01G029000 chr3D 97.727 44 0 1 3068 3110 58559168 58559211 2.160000e-09 75.0
29 TraesCS3B01G029000 chr3A 95.896 3728 117 6 941 4646 15835605 15839318 0.000000e+00 6004.0
30 TraesCS3B01G029000 chr3A 85.013 2342 244 42 791 3069 16009014 16011311 0.000000e+00 2281.0
31 TraesCS3B01G029000 chr3A 83.853 2118 272 34 988 3048 17379908 17377804 0.000000e+00 1953.0
32 TraesCS3B01G029000 chr3A 83.212 2198 276 48 928 3047 17331338 17333520 0.000000e+00 1929.0
33 TraesCS3B01G029000 chr3A 83.442 2138 267 41 988 3048 16234688 16232561 0.000000e+00 1906.0
34 TraesCS3B01G029000 chr3A 87.020 1587 171 23 3113 4672 16011285 16012863 0.000000e+00 1757.0
35 TraesCS3B01G029000 chr3A 83.974 1560 184 40 3134 4641 17333522 17335067 0.000000e+00 1435.0
36 TraesCS3B01G029000 chr3A 93.361 723 33 7 4869 5581 15841978 15842695 0.000000e+00 1055.0
37 TraesCS3B01G029000 chr3A 90.335 507 36 8 385 887 15835107 15835604 0.000000e+00 652.0
38 TraesCS3B01G029000 chr3A 84.426 488 63 10 3133 3614 17377804 17377324 8.490000e-128 468.0
39 TraesCS3B01G029000 chr3A 83.539 486 71 5 3133 3614 16232561 16232081 3.980000e-121 446.0
40 TraesCS3B01G029000 chr3A 89.706 136 12 2 722 855 17331108 17331243 7.450000e-39 172.0
41 TraesCS3B01G029000 chr3A 88.679 106 12 0 4774 4879 16012883 16012988 4.550000e-26 130.0
42 TraesCS3B01G029000 chr3A 86.792 106 14 0 4774 4879 16321533 16321638 9.850000e-23 119.0
43 TraesCS3B01G029000 chr3A 85.000 100 9 2 9 102 742361927 742361828 4.610000e-16 97.1
44 TraesCS3B01G029000 chr7D 92.711 343 23 2 385 726 439069317 439068976 1.400000e-135 494.0
45 TraesCS3B01G029000 chr7D 91.014 345 30 1 385 728 272593994 272593650 1.100000e-126 464.0
46 TraesCS3B01G029000 chr7D 92.444 225 16 1 146 369 452645479 452645703 2.520000e-83 320.0
47 TraesCS3B01G029000 chr7D 90.566 106 4 2 1 101 452645251 452645355 9.780000e-28 135.0
48 TraesCS3B01G029000 chr7B 91.354 347 28 2 385 729 579567904 579568250 1.820000e-129 473.0
49 TraesCS3B01G029000 chr2A 91.496 341 27 2 387 726 623737490 623737151 8.490000e-128 468.0
50 TraesCS3B01G029000 chr6D 90.678 354 28 5 377 728 156568714 156568364 3.050000e-127 466.0
51 TraesCS3B01G029000 chr6D 93.939 66 3 1 1 66 428618370 428618306 1.280000e-16 99.0
52 TraesCS3B01G029000 chr4D 90.141 355 31 4 385 737 306374525 306374173 5.110000e-125 459.0
53 TraesCS3B01G029000 chr6A 94.346 283 14 2 106 387 77901328 77901609 3.100000e-117 433.0
54 TraesCS3B01G029000 chr6A 93.993 283 14 3 106 387 78035602 78035882 5.180000e-115 425.0
55 TraesCS3B01G029000 chr6A 93.640 283 16 2 106 387 77996431 77996712 6.700000e-114 422.0
56 TraesCS3B01G029000 chr6A 93.262 282 17 2 106 387 77941422 77941701 1.120000e-111 414.0
57 TraesCS3B01G029000 chr6A 92.580 283 18 3 106 387 78097427 78097707 2.430000e-108 403.0
58 TraesCS3B01G029000 chr6A 93.309 269 17 1 106 373 78149176 78149444 4.060000e-106 396.0
59 TraesCS3B01G029000 chr1B 91.765 255 17 2 132 385 577200432 577200683 8.920000e-93 351.0
60 TraesCS3B01G029000 chr1B 86.239 109 7 2 1 102 577199989 577200096 1.650000e-20 111.0
61 TraesCS3B01G029000 chr5B 94.737 209 8 1 146 351 710239929 710239721 6.990000e-84 322.0
62 TraesCS3B01G029000 chr5B 88.889 108 4 4 1 102 710240197 710240092 5.890000e-25 126.0
63 TraesCS3B01G029000 chr5A 91.429 105 2 3 1 100 552231690 552231588 2.720000e-28 137.0
64 TraesCS3B01G029000 chr4B 90.654 107 4 2 1 102 651978992 651979097 2.720000e-28 137.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G029000 chr3B 12471486 12477081 5595 False 3512.666667 10334 98.850667 1 5596 3 chr3B.!!$F2 5595
1 TraesCS3B01G029000 chr3B 12837113 12843701 6588 True 2632.000000 6878 94.997000 385 5596 3 chr3B.!!$R2 5211
2 TraesCS3B01G029000 chr3B 12933370 12937055 3685 False 1891.500000 2148 85.362000 928 4672 2 chr3B.!!$F4 3744
3 TraesCS3B01G029000 chr3B 13245986 13249981 3995 False 1382.333333 2148 86.023000 928 5014 3 chr3B.!!$F5 4086
4 TraesCS3B01G029000 chr3B 13413561 13416716 3155 False 593.500000 1053 86.155500 1711 4879 2 chr3B.!!$F6 3168
5 TraesCS3B01G029000 chr3D 41592167 41597340 5173 True 4181.500000 6902 95.967500 386 5596 2 chr3D.!!$R4 5210
6 TraesCS3B01G029000 chr3D 41421340 41427235 5895 True 2030.000000 5856 92.617333 787 5431 3 chr3D.!!$R3 4644
7 TraesCS3B01G029000 chr3D 5328558 5330704 2146 False 1982.000000 1982 83.724000 925 3048 1 chr3D.!!$F1 2123
8 TraesCS3B01G029000 chr3D 5406454 5410513 4059 True 1190.000000 2030 84.179667 727 4672 3 chr3D.!!$R2 3945
9 TraesCS3B01G029000 chr3D 5373988 5376602 2614 True 1188.000000 1901 83.990500 973 3614 2 chr3D.!!$R1 2641
10 TraesCS3B01G029000 chr3A 15835107 15842695 7588 False 2570.333333 6004 93.197333 385 5581 3 chr3A.!!$F2 5196
11 TraesCS3B01G029000 chr3A 16009014 16012988 3974 False 1389.333333 2281 86.904000 791 4879 3 chr3A.!!$F3 4088
12 TraesCS3B01G029000 chr3A 17377324 17379908 2584 True 1210.500000 1953 84.139500 988 3614 2 chr3A.!!$R3 2626
13 TraesCS3B01G029000 chr3A 17331108 17335067 3959 False 1178.666667 1929 85.630667 722 4641 3 chr3A.!!$F4 3919
14 TraesCS3B01G029000 chr3A 16232081 16234688 2607 True 1176.000000 1906 83.490500 988 3614 2 chr3A.!!$R2 2626
15 TraesCS3B01G029000 chr1B 577199989 577200683 694 False 231.000000 351 89.002000 1 385 2 chr1B.!!$F1 384

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
318 319 0.037590 CCCCTGAACCAATCAACGGA 59.962 55.000 0.0 0.0 37.67 4.69 F
687 692 0.179073 GGCTGCATACATCGTCCAGT 60.179 55.000 0.5 0.0 0.00 4.00 F
1386 1470 0.768221 TCAGGAGCCTCAACCTTGGT 60.768 55.000 0.0 0.0 33.91 3.67 F
2357 2616 0.461961 GCCGCATCTGGAACTAGACT 59.538 55.000 0.0 0.0 0.00 3.24 F
2690 2949 1.073763 CCAAGTCAAGTGGGGTGATGA 59.926 52.381 0.0 0.0 32.03 2.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1753 1858 0.627451 TCTAGGTTCTGGTAGGCCGA 59.373 55.000 0.0 0.0 37.67 5.54 R
2012 2256 1.002430 ACCTCGCATCTTTCTGCTTCA 59.998 47.619 0.0 0.0 40.06 3.02 R
3374 3810 0.684479 AGCATCGCTGGTCTCCACTA 60.684 55.000 0.0 0.0 37.57 2.74 R
4248 4755 1.476891 GACCATTGTCTCGTAGCCAGA 59.523 52.381 0.0 0.0 38.53 3.86 R
4652 5161 1.070175 CGTGTAGCAAAGGTTTCACCG 60.070 52.381 0.0 0.0 44.90 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 0.763604 TCCCAGTCCCACGTTTGGTA 60.764 55.000 1.04 0.00 42.10 3.25
47 48 0.604511 CCCAGTCCCACGTTTGGTAC 60.605 60.000 1.04 0.00 42.10 3.34
55 56 4.272100 CGTTTGGTACGGGGTGAG 57.728 61.111 0.00 0.00 46.42 3.51
72 73 6.598064 CGGGGTGAGATTATTTATGGGAATAC 59.402 42.308 0.00 0.00 0.00 1.89
74 75 8.116026 GGGGTGAGATTATTTATGGGAATACAT 58.884 37.037 0.00 0.00 34.90 2.29
75 76 8.960591 GGGTGAGATTATTTATGGGAATACATG 58.039 37.037 0.00 0.00 32.39 3.21
76 77 9.739276 GGTGAGATTATTTATGGGAATACATGA 57.261 33.333 0.00 0.00 32.39 3.07
89 90 8.657387 TGGGAATACATGAACAAATAAAAGGA 57.343 30.769 0.00 0.00 0.00 3.36
90 91 9.094578 TGGGAATACATGAACAAATAAAAGGAA 57.905 29.630 0.00 0.00 0.00 3.36
91 92 9.586435 GGGAATACATGAACAAATAAAAGGAAG 57.414 33.333 0.00 0.00 0.00 3.46
92 93 9.586435 GGAATACATGAACAAATAAAAGGAAGG 57.414 33.333 0.00 0.00 0.00 3.46
97 98 8.971073 ACATGAACAAATAAAAGGAAGGATAGG 58.029 33.333 0.00 0.00 0.00 2.57
98 99 8.971073 CATGAACAAATAAAAGGAAGGATAGGT 58.029 33.333 0.00 0.00 0.00 3.08
99 100 8.950007 TGAACAAATAAAAGGAAGGATAGGTT 57.050 30.769 0.00 0.00 0.00 3.50
102 103 9.816787 AACAAATAAAAGGAAGGATAGGTTACA 57.183 29.630 0.00 0.00 0.00 2.41
103 104 9.990868 ACAAATAAAAGGAAGGATAGGTTACAT 57.009 29.630 0.00 0.00 0.00 2.29
108 109 7.451731 AAAGGAAGGATAGGTTACATCATCA 57.548 36.000 0.00 0.00 0.00 3.07
109 110 6.678568 AGGAAGGATAGGTTACATCATCAG 57.321 41.667 0.00 0.00 0.00 2.90
110 111 5.545723 AGGAAGGATAGGTTACATCATCAGG 59.454 44.000 0.00 0.00 0.00 3.86
111 112 5.280215 GGAAGGATAGGTTACATCATCAGGG 60.280 48.000 0.00 0.00 0.00 4.45
112 113 5.093236 AGGATAGGTTACATCATCAGGGA 57.907 43.478 0.00 0.00 0.00 4.20
113 114 5.090139 AGGATAGGTTACATCATCAGGGAG 58.910 45.833 0.00 0.00 0.00 4.30
114 115 4.841246 GGATAGGTTACATCATCAGGGAGT 59.159 45.833 0.00 0.00 0.00 3.85
115 116 6.017192 GGATAGGTTACATCATCAGGGAGTA 58.983 44.000 0.00 0.00 0.00 2.59
116 117 6.153680 GGATAGGTTACATCATCAGGGAGTAG 59.846 46.154 0.00 0.00 0.00 2.57
117 118 4.884961 AGGTTACATCATCAGGGAGTAGT 58.115 43.478 0.00 0.00 0.00 2.73
118 119 5.281314 AGGTTACATCATCAGGGAGTAGTT 58.719 41.667 0.00 0.00 0.00 2.24
119 120 6.441222 AGGTTACATCATCAGGGAGTAGTTA 58.559 40.000 0.00 0.00 0.00 2.24
120 121 6.551601 AGGTTACATCATCAGGGAGTAGTTAG 59.448 42.308 0.00 0.00 0.00 2.34
121 122 4.946478 ACATCATCAGGGAGTAGTTAGC 57.054 45.455 0.00 0.00 0.00 3.09
122 123 3.319405 ACATCATCAGGGAGTAGTTAGCG 59.681 47.826 0.00 0.00 0.00 4.26
123 124 1.681793 TCATCAGGGAGTAGTTAGCGC 59.318 52.381 0.00 0.00 0.00 5.92
124 125 1.683917 CATCAGGGAGTAGTTAGCGCT 59.316 52.381 17.26 17.26 0.00 5.92
125 126 1.103803 TCAGGGAGTAGTTAGCGCTG 58.896 55.000 22.90 0.00 42.04 5.18
126 127 0.103208 CAGGGAGTAGTTAGCGCTGG 59.897 60.000 22.90 0.00 38.48 4.85
127 128 1.227292 GGGAGTAGTTAGCGCTGGC 60.227 63.158 22.90 12.74 40.37 4.85
128 129 1.227292 GGAGTAGTTAGCGCTGGCC 60.227 63.158 22.90 7.48 41.24 5.36
129 130 1.515954 GAGTAGTTAGCGCTGGCCA 59.484 57.895 22.90 4.71 41.24 5.36
130 131 0.528684 GAGTAGTTAGCGCTGGCCAG 60.529 60.000 29.34 29.34 41.24 4.85
131 132 1.218316 GTAGTTAGCGCTGGCCAGT 59.782 57.895 32.81 16.84 41.24 4.00
132 133 0.391263 GTAGTTAGCGCTGGCCAGTT 60.391 55.000 32.81 20.73 41.24 3.16
133 134 1.134907 GTAGTTAGCGCTGGCCAGTTA 60.135 52.381 32.81 19.74 41.24 2.24
134 135 0.108138 AGTTAGCGCTGGCCAGTTAG 60.108 55.000 32.81 24.02 41.24 2.34
135 136 0.391263 GTTAGCGCTGGCCAGTTAGT 60.391 55.000 32.81 17.71 41.24 2.24
136 137 0.323629 TTAGCGCTGGCCAGTTAGTT 59.676 50.000 32.81 22.95 41.24 2.24
137 138 0.323629 TAGCGCTGGCCAGTTAGTTT 59.676 50.000 32.81 17.94 41.24 2.66
138 139 1.210155 GCGCTGGCCAGTTAGTTTG 59.790 57.895 32.81 15.05 0.00 2.93
139 140 1.875963 CGCTGGCCAGTTAGTTTGG 59.124 57.895 32.81 6.54 38.78 3.28
140 141 0.605319 CGCTGGCCAGTTAGTTTGGA 60.605 55.000 32.81 0.00 37.96 3.53
141 142 1.168714 GCTGGCCAGTTAGTTTGGAG 58.831 55.000 32.81 5.17 37.96 3.86
142 143 1.826385 CTGGCCAGTTAGTTTGGAGG 58.174 55.000 25.53 0.00 37.96 4.30
143 144 1.351017 CTGGCCAGTTAGTTTGGAGGA 59.649 52.381 25.53 0.00 37.96 3.71
144 145 1.777878 TGGCCAGTTAGTTTGGAGGAA 59.222 47.619 0.00 0.00 37.96 3.36
145 146 2.378547 TGGCCAGTTAGTTTGGAGGAAT 59.621 45.455 0.00 0.00 37.96 3.01
146 147 3.181423 TGGCCAGTTAGTTTGGAGGAATT 60.181 43.478 0.00 0.00 37.96 2.17
147 148 3.832490 GGCCAGTTAGTTTGGAGGAATTT 59.168 43.478 0.00 0.00 37.96 1.82
148 149 4.283467 GGCCAGTTAGTTTGGAGGAATTTT 59.717 41.667 0.00 0.00 37.96 1.82
149 150 5.230182 GCCAGTTAGTTTGGAGGAATTTTG 58.770 41.667 0.00 0.00 37.96 2.44
150 151 5.221441 GCCAGTTAGTTTGGAGGAATTTTGT 60.221 40.000 0.00 0.00 37.96 2.83
151 152 6.685368 GCCAGTTAGTTTGGAGGAATTTTGTT 60.685 38.462 0.00 0.00 37.96 2.83
152 153 6.701400 CCAGTTAGTTTGGAGGAATTTTGTTG 59.299 38.462 0.00 0.00 37.96 3.33
153 154 6.200854 CAGTTAGTTTGGAGGAATTTTGTTGC 59.799 38.462 0.00 0.00 0.00 4.17
154 155 3.716601 AGTTTGGAGGAATTTTGTTGCG 58.283 40.909 0.00 0.00 0.00 4.85
155 156 2.799978 GTTTGGAGGAATTTTGTTGCGG 59.200 45.455 0.00 0.00 0.00 5.69
156 157 0.965439 TGGAGGAATTTTGTTGCGGG 59.035 50.000 0.00 0.00 0.00 6.13
157 158 1.253100 GGAGGAATTTTGTTGCGGGA 58.747 50.000 0.00 0.00 0.00 5.14
158 159 1.202348 GGAGGAATTTTGTTGCGGGAG 59.798 52.381 0.00 0.00 0.00 4.30
159 160 1.202348 GAGGAATTTTGTTGCGGGAGG 59.798 52.381 0.00 0.00 0.00 4.30
160 161 0.966179 GGAATTTTGTTGCGGGAGGT 59.034 50.000 0.00 0.00 0.00 3.85
161 162 1.336795 GGAATTTTGTTGCGGGAGGTG 60.337 52.381 0.00 0.00 0.00 4.00
162 163 0.678950 AATTTTGTTGCGGGAGGTGG 59.321 50.000 0.00 0.00 0.00 4.61
163 164 1.184970 ATTTTGTTGCGGGAGGTGGG 61.185 55.000 0.00 0.00 0.00 4.61
164 165 4.966787 TTGTTGCGGGAGGTGGGC 62.967 66.667 0.00 0.00 0.00 5.36
181 182 4.256983 TGGGCCACCAAATATGTAATGA 57.743 40.909 0.00 0.00 45.87 2.57
182 183 4.813809 TGGGCCACCAAATATGTAATGAT 58.186 39.130 0.00 0.00 45.87 2.45
183 184 5.958321 TGGGCCACCAAATATGTAATGATA 58.042 37.500 0.00 0.00 45.87 2.15
184 185 6.560361 TGGGCCACCAAATATGTAATGATAT 58.440 36.000 0.00 0.00 45.87 1.63
185 186 7.703755 TGGGCCACCAAATATGTAATGATATA 58.296 34.615 0.00 0.00 45.87 0.86
186 187 8.343028 TGGGCCACCAAATATGTAATGATATAT 58.657 33.333 0.00 0.00 45.87 0.86
187 188 9.200817 GGGCCACCAAATATGTAATGATATATT 57.799 33.333 4.39 0.00 32.41 1.28
205 206 9.199982 TGATATATTTTTAGACGTCGAATTCCC 57.800 33.333 12.01 0.00 0.00 3.97
206 207 9.199982 GATATATTTTTAGACGTCGAATTCCCA 57.800 33.333 12.01 0.00 0.00 4.37
207 208 9.720769 ATATATTTTTAGACGTCGAATTCCCAT 57.279 29.630 12.01 5.41 0.00 4.00
208 209 6.753107 ATTTTTAGACGTCGAATTCCCATT 57.247 33.333 12.01 0.00 0.00 3.16
209 210 5.789710 TTTTAGACGTCGAATTCCCATTC 57.210 39.130 12.01 0.00 36.20 2.67
210 211 2.311124 AGACGTCGAATTCCCATTCC 57.689 50.000 10.46 0.00 36.18 3.01
211 212 1.831736 AGACGTCGAATTCCCATTCCT 59.168 47.619 10.46 0.00 36.18 3.36
212 213 2.159085 AGACGTCGAATTCCCATTCCTC 60.159 50.000 10.46 0.00 36.18 3.71
213 214 1.134491 ACGTCGAATTCCCATTCCTCC 60.134 52.381 0.00 0.00 36.18 4.30
214 215 1.583054 GTCGAATTCCCATTCCTCCG 58.417 55.000 0.00 0.00 36.18 4.63
215 216 0.179056 TCGAATTCCCATTCCTCCGC 60.179 55.000 0.00 0.00 36.18 5.54
216 217 0.179045 CGAATTCCCATTCCTCCGCT 60.179 55.000 0.00 0.00 36.18 5.52
217 218 1.312815 GAATTCCCATTCCTCCGCTG 58.687 55.000 0.00 0.00 33.74 5.18
218 219 0.918983 AATTCCCATTCCTCCGCTGA 59.081 50.000 0.00 0.00 0.00 4.26
219 220 0.918983 ATTCCCATTCCTCCGCTGAA 59.081 50.000 0.00 0.00 0.00 3.02
220 221 0.918983 TTCCCATTCCTCCGCTGAAT 59.081 50.000 0.00 0.00 32.77 2.57
221 222 0.918983 TCCCATTCCTCCGCTGAATT 59.081 50.000 0.00 0.00 30.16 2.17
222 223 2.123589 TCCCATTCCTCCGCTGAATTA 58.876 47.619 0.00 0.00 30.16 1.40
223 224 2.158813 TCCCATTCCTCCGCTGAATTAC 60.159 50.000 0.00 0.00 30.16 1.89
224 225 2.222027 CCATTCCTCCGCTGAATTACC 58.778 52.381 0.00 0.00 30.16 2.85
225 226 2.421388 CCATTCCTCCGCTGAATTACCA 60.421 50.000 0.00 0.00 30.16 3.25
226 227 2.691409 TTCCTCCGCTGAATTACCAG 57.309 50.000 0.00 0.00 37.23 4.00
227 228 0.830648 TCCTCCGCTGAATTACCAGG 59.169 55.000 0.00 0.00 34.82 4.45
228 229 0.815615 CCTCCGCTGAATTACCAGGC 60.816 60.000 0.00 0.00 34.82 4.85
229 230 0.179000 CTCCGCTGAATTACCAGGCT 59.821 55.000 0.00 0.00 34.82 4.58
230 231 0.178068 TCCGCTGAATTACCAGGCTC 59.822 55.000 0.00 0.00 34.82 4.70
231 232 0.815615 CCGCTGAATTACCAGGCTCC 60.816 60.000 0.00 0.00 34.82 4.70
232 233 0.815615 CGCTGAATTACCAGGCTCCC 60.816 60.000 0.00 0.00 34.82 4.30
233 234 0.466372 GCTGAATTACCAGGCTCCCC 60.466 60.000 0.00 0.00 34.82 4.81
234 235 0.183731 CTGAATTACCAGGCTCCCCC 59.816 60.000 0.00 0.00 0.00 5.40
235 236 1.148498 GAATTACCAGGCTCCCCCG 59.852 63.158 0.00 0.00 39.21 5.73
236 237 2.339275 GAATTACCAGGCTCCCCCGG 62.339 65.000 0.00 0.00 39.21 5.73
237 238 3.653122 ATTACCAGGCTCCCCCGGT 62.653 63.158 0.00 0.00 41.36 5.28
238 239 3.876255 TTACCAGGCTCCCCCGGTT 62.876 63.158 0.00 0.00 39.86 4.44
239 240 2.474133 TTACCAGGCTCCCCCGGTTA 62.474 60.000 0.00 0.00 39.86 2.85
240 241 2.884179 TACCAGGCTCCCCCGGTTAG 62.884 65.000 0.00 0.00 39.86 2.34
241 242 2.365105 CAGGCTCCCCCGGTTAGA 60.365 66.667 0.00 0.00 39.21 2.10
242 243 2.041819 AGGCTCCCCCGGTTAGAG 60.042 66.667 0.00 4.36 39.21 2.43
243 244 2.042230 GGCTCCCCCGGTTAGAGA 60.042 66.667 14.84 0.00 0.00 3.10
244 245 1.459730 GGCTCCCCCGGTTAGAGAT 60.460 63.158 14.84 0.00 0.00 2.75
245 246 1.473497 GGCTCCCCCGGTTAGAGATC 61.473 65.000 14.84 4.44 0.00 2.75
246 247 1.807495 GCTCCCCCGGTTAGAGATCG 61.807 65.000 14.84 0.00 0.00 3.69
247 248 0.178998 CTCCCCCGGTTAGAGATCGA 60.179 60.000 0.00 0.00 0.00 3.59
248 249 0.481567 TCCCCCGGTTAGAGATCGAT 59.518 55.000 0.00 0.00 0.00 3.59
249 250 0.603569 CCCCCGGTTAGAGATCGATG 59.396 60.000 0.54 0.00 0.00 3.84
250 251 0.603569 CCCCGGTTAGAGATCGATGG 59.396 60.000 0.54 0.00 0.00 3.51
251 252 0.603569 CCCGGTTAGAGATCGATGGG 59.396 60.000 0.54 0.00 0.00 4.00
252 253 1.617322 CCGGTTAGAGATCGATGGGA 58.383 55.000 0.54 0.00 0.00 4.37
253 254 1.542030 CCGGTTAGAGATCGATGGGAG 59.458 57.143 0.54 0.00 0.00 4.30
254 255 2.231529 CGGTTAGAGATCGATGGGAGT 58.768 52.381 0.54 0.00 0.00 3.85
255 256 2.623889 CGGTTAGAGATCGATGGGAGTT 59.376 50.000 0.54 0.00 0.00 3.01
256 257 3.551046 CGGTTAGAGATCGATGGGAGTTG 60.551 52.174 0.54 0.00 0.00 3.16
257 258 3.243907 GGTTAGAGATCGATGGGAGTTGG 60.244 52.174 0.54 0.00 0.00 3.77
258 259 0.755686 AGAGATCGATGGGAGTTGGC 59.244 55.000 0.54 0.00 0.00 4.52
259 260 0.250081 GAGATCGATGGGAGTTGGCC 60.250 60.000 0.54 0.00 0.00 5.36
269 270 0.474614 GGAGTTGGCCCTCCTAATCC 59.525 60.000 18.23 5.45 46.34 3.01
270 271 0.474614 GAGTTGGCCCTCCTAATCCC 59.525 60.000 0.00 0.00 0.00 3.85
271 272 0.994050 AGTTGGCCCTCCTAATCCCC 60.994 60.000 0.00 0.00 0.00 4.81
272 273 1.699930 TTGGCCCTCCTAATCCCCC 60.700 63.158 0.00 0.00 0.00 5.40
273 274 2.222357 TTGGCCCTCCTAATCCCCCT 62.222 60.000 0.00 0.00 0.00 4.79
274 275 1.387492 GGCCCTCCTAATCCCCCTT 60.387 63.158 0.00 0.00 0.00 3.95
275 276 1.427895 GGCCCTCCTAATCCCCCTTC 61.428 65.000 0.00 0.00 0.00 3.46
276 277 1.427895 GCCCTCCTAATCCCCCTTCC 61.428 65.000 0.00 0.00 0.00 3.46
277 278 0.772517 CCCTCCTAATCCCCCTTCCC 60.773 65.000 0.00 0.00 0.00 3.97
278 279 0.772517 CCTCCTAATCCCCCTTCCCC 60.773 65.000 0.00 0.00 0.00 4.81
279 280 0.272235 CTCCTAATCCCCCTTCCCCT 59.728 60.000 0.00 0.00 0.00 4.79
280 281 0.735095 TCCTAATCCCCCTTCCCCTT 59.265 55.000 0.00 0.00 0.00 3.95
281 282 1.149986 CCTAATCCCCCTTCCCCTTC 58.850 60.000 0.00 0.00 0.00 3.46
282 283 1.149986 CTAATCCCCCTTCCCCTTCC 58.850 60.000 0.00 0.00 0.00 3.46
283 284 0.329138 TAATCCCCCTTCCCCTTCCC 60.329 60.000 0.00 0.00 0.00 3.97
284 285 2.165119 AATCCCCCTTCCCCTTCCCT 62.165 60.000 0.00 0.00 0.00 4.20
285 286 2.165119 ATCCCCCTTCCCCTTCCCTT 62.165 60.000 0.00 0.00 0.00 3.95
286 287 2.626467 CCCCCTTCCCCTTCCCTTG 61.626 68.421 0.00 0.00 0.00 3.61
287 288 2.360585 CCCTTCCCCTTCCCTTGC 59.639 66.667 0.00 0.00 0.00 4.01
288 289 2.241659 CCCTTCCCCTTCCCTTGCT 61.242 63.158 0.00 0.00 0.00 3.91
289 290 0.919289 CCCTTCCCCTTCCCTTGCTA 60.919 60.000 0.00 0.00 0.00 3.49
290 291 0.999712 CCTTCCCCTTCCCTTGCTAA 59.000 55.000 0.00 0.00 0.00 3.09
291 292 1.570979 CCTTCCCCTTCCCTTGCTAAT 59.429 52.381 0.00 0.00 0.00 1.73
292 293 2.023984 CCTTCCCCTTCCCTTGCTAATT 60.024 50.000 0.00 0.00 0.00 1.40
293 294 3.291584 CTTCCCCTTCCCTTGCTAATTC 58.708 50.000 0.00 0.00 0.00 2.17
294 295 1.569072 TCCCCTTCCCTTGCTAATTCC 59.431 52.381 0.00 0.00 0.00 3.01
295 296 1.411644 CCCCTTCCCTTGCTAATTCCC 60.412 57.143 0.00 0.00 0.00 3.97
296 297 1.287739 CCCTTCCCTTGCTAATTCCCA 59.712 52.381 0.00 0.00 0.00 4.37
297 298 2.292192 CCCTTCCCTTGCTAATTCCCAA 60.292 50.000 0.00 0.00 0.00 4.12
298 299 3.440127 CCTTCCCTTGCTAATTCCCAAA 58.560 45.455 0.00 0.00 0.00 3.28
299 300 3.195610 CCTTCCCTTGCTAATTCCCAAAC 59.804 47.826 0.00 0.00 0.00 2.93
300 301 2.815158 TCCCTTGCTAATTCCCAAACC 58.185 47.619 0.00 0.00 0.00 3.27
301 302 1.831106 CCCTTGCTAATTCCCAAACCC 59.169 52.381 0.00 0.00 0.00 4.11
302 303 1.831106 CCTTGCTAATTCCCAAACCCC 59.169 52.381 0.00 0.00 0.00 4.95
303 304 2.559705 CCTTGCTAATTCCCAAACCCCT 60.560 50.000 0.00 0.00 0.00 4.79
304 305 2.230130 TGCTAATTCCCAAACCCCTG 57.770 50.000 0.00 0.00 0.00 4.45
305 306 1.713647 TGCTAATTCCCAAACCCCTGA 59.286 47.619 0.00 0.00 0.00 3.86
306 307 2.110899 TGCTAATTCCCAAACCCCTGAA 59.889 45.455 0.00 0.00 0.00 3.02
307 308 2.496070 GCTAATTCCCAAACCCCTGAAC 59.504 50.000 0.00 0.00 0.00 3.18
308 309 2.024176 AATTCCCAAACCCCTGAACC 57.976 50.000 0.00 0.00 0.00 3.62
309 310 0.863956 ATTCCCAAACCCCTGAACCA 59.136 50.000 0.00 0.00 0.00 3.67
310 311 0.637195 TTCCCAAACCCCTGAACCAA 59.363 50.000 0.00 0.00 0.00 3.67
311 312 0.863956 TCCCAAACCCCTGAACCAAT 59.136 50.000 0.00 0.00 0.00 3.16
312 313 1.203125 TCCCAAACCCCTGAACCAATC 60.203 52.381 0.00 0.00 0.00 2.67
313 314 1.482177 CCCAAACCCCTGAACCAATCA 60.482 52.381 0.00 0.00 36.38 2.57
314 315 2.324541 CCAAACCCCTGAACCAATCAA 58.675 47.619 0.00 0.00 37.67 2.57
315 316 2.037121 CCAAACCCCTGAACCAATCAAC 59.963 50.000 0.00 0.00 37.67 3.18
316 317 1.616159 AACCCCTGAACCAATCAACG 58.384 50.000 0.00 0.00 37.67 4.10
317 318 0.251165 ACCCCTGAACCAATCAACGG 60.251 55.000 0.00 0.00 37.67 4.44
318 319 0.037590 CCCCTGAACCAATCAACGGA 59.962 55.000 0.00 0.00 37.67 4.69
319 320 1.340991 CCCCTGAACCAATCAACGGAT 60.341 52.381 0.00 0.00 37.67 4.18
320 321 2.446435 CCCTGAACCAATCAACGGATT 58.554 47.619 0.00 0.00 44.51 3.01
321 322 2.825532 CCCTGAACCAATCAACGGATTT 59.174 45.455 0.00 0.00 41.78 2.17
322 323 3.258123 CCCTGAACCAATCAACGGATTTT 59.742 43.478 0.00 0.00 41.78 1.82
323 324 4.262420 CCCTGAACCAATCAACGGATTTTT 60.262 41.667 0.00 0.00 41.78 1.94
324 325 5.047660 CCCTGAACCAATCAACGGATTTTTA 60.048 40.000 0.00 0.00 41.78 1.52
325 326 6.092748 CCTGAACCAATCAACGGATTTTTAG 58.907 40.000 0.00 0.00 41.78 1.85
326 327 6.294508 CCTGAACCAATCAACGGATTTTTAGT 60.295 38.462 0.00 0.00 41.78 2.24
327 328 6.674066 TGAACCAATCAACGGATTTTTAGTC 58.326 36.000 0.00 0.00 41.78 2.59
328 329 6.488683 TGAACCAATCAACGGATTTTTAGTCT 59.511 34.615 0.00 0.00 41.78 3.24
329 330 6.496338 ACCAATCAACGGATTTTTAGTCTC 57.504 37.500 0.00 0.00 41.78 3.36
330 331 6.001460 ACCAATCAACGGATTTTTAGTCTCA 58.999 36.000 0.00 0.00 41.78 3.27
331 332 6.072673 ACCAATCAACGGATTTTTAGTCTCAC 60.073 38.462 0.00 0.00 41.78 3.51
332 333 6.149474 CCAATCAACGGATTTTTAGTCTCACT 59.851 38.462 0.00 0.00 41.78 3.41
333 334 7.333423 CCAATCAACGGATTTTTAGTCTCACTA 59.667 37.037 0.00 0.00 41.78 2.74
334 335 8.717821 CAATCAACGGATTTTTAGTCTCACTAA 58.282 33.333 0.00 0.00 41.78 2.24
335 336 9.449719 AATCAACGGATTTTTAGTCTCACTAAT 57.550 29.630 0.00 0.00 40.87 1.73
336 337 8.475331 TCAACGGATTTTTAGTCTCACTAATC 57.525 34.615 0.00 0.00 40.08 1.75
337 338 8.311836 TCAACGGATTTTTAGTCTCACTAATCT 58.688 33.333 0.00 0.00 40.08 2.40
338 339 8.936864 CAACGGATTTTTAGTCTCACTAATCTT 58.063 33.333 0.00 0.00 40.08 2.40
346 347 9.939802 TTTTAGTCTCACTAATCTTAAACTCCC 57.060 33.333 0.00 0.00 40.08 4.30
347 348 8.660295 TTAGTCTCACTAATCTTAAACTCCCA 57.340 34.615 0.00 0.00 35.89 4.37
348 349 7.741554 AGTCTCACTAATCTTAAACTCCCAT 57.258 36.000 0.00 0.00 0.00 4.00
349 350 8.152023 AGTCTCACTAATCTTAAACTCCCATT 57.848 34.615 0.00 0.00 0.00 3.16
350 351 8.261522 AGTCTCACTAATCTTAAACTCCCATTC 58.738 37.037 0.00 0.00 0.00 2.67
351 352 7.496263 GTCTCACTAATCTTAAACTCCCATTCC 59.504 40.741 0.00 0.00 0.00 3.01
352 353 6.659824 TCACTAATCTTAAACTCCCATTCCC 58.340 40.000 0.00 0.00 0.00 3.97
353 354 6.447084 TCACTAATCTTAAACTCCCATTCCCT 59.553 38.462 0.00 0.00 0.00 4.20
354 355 7.626084 TCACTAATCTTAAACTCCCATTCCCTA 59.374 37.037 0.00 0.00 0.00 3.53
355 356 7.715686 CACTAATCTTAAACTCCCATTCCCTAC 59.284 40.741 0.00 0.00 0.00 3.18
356 357 5.648330 ATCTTAAACTCCCATTCCCTACC 57.352 43.478 0.00 0.00 0.00 3.18
357 358 3.784202 TCTTAAACTCCCATTCCCTACCC 59.216 47.826 0.00 0.00 0.00 3.69
358 359 1.305886 AAACTCCCATTCCCTACCCC 58.694 55.000 0.00 0.00 0.00 4.95
359 360 0.626574 AACTCCCATTCCCTACCCCC 60.627 60.000 0.00 0.00 0.00 5.40
360 361 1.005556 CTCCCATTCCCTACCCCCA 59.994 63.158 0.00 0.00 0.00 4.96
361 362 0.626277 CTCCCATTCCCTACCCCCAA 60.626 60.000 0.00 0.00 0.00 4.12
362 363 0.922243 TCCCATTCCCTACCCCCAAC 60.922 60.000 0.00 0.00 0.00 3.77
363 364 0.924226 CCCATTCCCTACCCCCAACT 60.924 60.000 0.00 0.00 0.00 3.16
364 365 0.551396 CCATTCCCTACCCCCAACTC 59.449 60.000 0.00 0.00 0.00 3.01
365 366 0.551396 CATTCCCTACCCCCAACTCC 59.449 60.000 0.00 0.00 0.00 3.85
366 367 0.626574 ATTCCCTACCCCCAACTCCC 60.627 60.000 0.00 0.00 0.00 4.30
367 368 2.694992 CCCTACCCCCAACTCCCC 60.695 72.222 0.00 0.00 0.00 4.81
368 369 2.694992 CCTACCCCCAACTCCCCC 60.695 72.222 0.00 0.00 0.00 5.40
369 370 2.126372 CTACCCCCAACTCCCCCA 59.874 66.667 0.00 0.00 0.00 4.96
370 371 1.542881 CTACCCCCAACTCCCCCAA 60.543 63.158 0.00 0.00 0.00 4.12
371 372 1.072063 TACCCCCAACTCCCCCAAA 60.072 57.895 0.00 0.00 0.00 3.28
372 373 1.437013 TACCCCCAACTCCCCCAAAC 61.437 60.000 0.00 0.00 0.00 2.93
373 374 2.119611 CCCCAACTCCCCCAAACC 59.880 66.667 0.00 0.00 0.00 3.27
374 375 2.784654 CCCCAACTCCCCCAAACCA 61.785 63.158 0.00 0.00 0.00 3.67
375 376 1.234529 CCCAACTCCCCCAAACCAA 59.765 57.895 0.00 0.00 0.00 3.67
376 377 0.399233 CCCAACTCCCCCAAACCAAA 60.399 55.000 0.00 0.00 0.00 3.28
377 378 0.756294 CCAACTCCCCCAAACCAAAC 59.244 55.000 0.00 0.00 0.00 2.93
378 379 1.490574 CAACTCCCCCAAACCAAACA 58.509 50.000 0.00 0.00 0.00 2.83
379 380 1.138069 CAACTCCCCCAAACCAAACAC 59.862 52.381 0.00 0.00 0.00 3.32
380 381 0.753848 ACTCCCCCAAACCAAACACG 60.754 55.000 0.00 0.00 0.00 4.49
381 382 2.082629 CTCCCCCAAACCAAACACGC 62.083 60.000 0.00 0.00 0.00 5.34
382 383 2.131067 CCCCCAAACCAAACACGCT 61.131 57.895 0.00 0.00 0.00 5.07
383 384 1.067250 CCCCAAACCAAACACGCTG 59.933 57.895 0.00 0.00 0.00 5.18
391 392 3.120321 ACCAAACACGCTGTGAAGATA 57.880 42.857 14.18 0.00 36.96 1.98
528 529 2.857186 AAATGTTGGGTTTGGATGCC 57.143 45.000 0.00 0.00 0.00 4.40
535 536 0.251787 GGGTTTGGATGCCAGGTCTT 60.252 55.000 0.00 0.00 33.81 3.01
549 550 4.600062 CCAGGTCTTTTTGGTATTAGGCT 58.400 43.478 0.00 0.00 0.00 4.58
568 570 1.689273 CTAGACTATCAGCGCCCCTTT 59.311 52.381 2.29 0.00 0.00 3.11
629 634 5.172934 CGGTGGCTTTAGTATTACTGTTGA 58.827 41.667 6.60 0.00 0.00 3.18
687 692 0.179073 GGCTGCATACATCGTCCAGT 60.179 55.000 0.50 0.00 0.00 4.00
690 695 2.892374 CTGCATACATCGTCCAGTTGA 58.108 47.619 0.00 0.00 0.00 3.18
694 699 3.932710 GCATACATCGTCCAGTTGAAGAA 59.067 43.478 0.00 0.00 35.06 2.52
722 727 4.567958 GGGGTCCTCCTCCTTTTCTAAAAG 60.568 50.000 8.00 8.00 39.31 2.27
740 749 9.478768 TTCTAAAAGAAAAACAAAAACCTCGTT 57.521 25.926 0.00 0.00 29.99 3.85
984 1055 1.742880 TACGTACGTGCTCTCGCCT 60.743 57.895 30.25 1.85 34.43 5.52
1386 1470 0.768221 TCAGGAGCCTCAACCTTGGT 60.768 55.000 0.00 0.00 33.91 3.67
1769 1874 1.265454 CCTTCGGCCTACCAGAACCT 61.265 60.000 0.00 0.00 34.57 3.50
1781 1886 5.470777 CCTACCAGAACCTAGACGATCTAAG 59.529 48.000 0.00 0.00 0.00 2.18
1910 2126 9.125026 ACATGATGATGATAATGATGATGATGG 57.875 33.333 0.00 0.00 33.36 3.51
1911 2127 9.125026 CATGATGATGATAATGATGATGATGGT 57.875 33.333 0.00 0.00 0.00 3.55
2321 2580 8.406297 CACTACTGCTGATGTGATAACTACTAA 58.594 37.037 12.43 0.00 32.72 2.24
2357 2616 0.461961 GCCGCATCTGGAACTAGACT 59.538 55.000 0.00 0.00 0.00 3.24
2530 2789 4.141846 ACCACTCTGCTTACTATGGTGATG 60.142 45.833 0.00 0.00 38.99 3.07
2690 2949 1.073763 CCAAGTCAAGTGGGGTGATGA 59.926 52.381 0.00 0.00 32.03 2.92
2987 3395 5.483937 GGGATTATTTTGGTTTCTCCTGGTT 59.516 40.000 0.00 0.00 37.07 3.67
3305 3738 4.647564 ACTTGATGAACTGGAGGTCATT 57.352 40.909 8.58 0.00 0.00 2.57
3307 3740 4.202503 ACTTGATGAACTGGAGGTCATTGT 60.203 41.667 8.58 6.02 0.00 2.71
3308 3741 3.942829 TGATGAACTGGAGGTCATTGTC 58.057 45.455 8.58 0.00 0.00 3.18
3309 3742 3.327464 TGATGAACTGGAGGTCATTGTCA 59.673 43.478 8.58 0.96 0.00 3.58
3374 3810 2.384828 TGATAGTATCGGTGGTGCTGT 58.615 47.619 5.68 0.00 0.00 4.40
3931 4438 5.648178 ATTGCAGAAACAATCTACATGCA 57.352 34.783 0.00 0.00 35.31 3.96
4248 4755 7.882791 TCAATGACAAACCATACTACAATGAGT 59.117 33.333 0.00 0.00 0.00 3.41
4394 4901 8.314021 GGATTTGAGGAATTTGTTAAGGAACAT 58.686 33.333 0.00 0.00 44.96 2.71
4438 4945 4.041917 CAGGGCATGCAACGCGTT 62.042 61.111 20.79 20.79 0.00 4.84
4480 4987 2.089201 CAATGCTCATGCCACTGAAGA 58.911 47.619 0.00 0.00 38.71 2.87
4544 5051 0.251341 CCAAGGTAGTGCCAAGCCTT 60.251 55.000 0.00 0.00 41.55 4.35
4565 5072 0.694771 TGGCAGCCTTCACAGAGATT 59.305 50.000 14.15 0.00 0.00 2.40
4652 5161 6.313411 ACTCACTAGACAGACGAGTATGTAAC 59.687 42.308 3.32 0.00 36.76 2.50
4678 5187 3.738830 AACCTTTGCTACACGTACAGA 57.261 42.857 0.00 0.00 0.00 3.41
4679 5188 3.955650 ACCTTTGCTACACGTACAGAT 57.044 42.857 0.00 0.00 0.00 2.90
4680 5189 4.267349 ACCTTTGCTACACGTACAGATT 57.733 40.909 0.00 0.00 0.00 2.40
4687 5196 6.990341 TGCTACACGTACAGATTAGTTAGA 57.010 37.500 0.00 0.00 0.00 2.10
4690 5199 7.913821 TGCTACACGTACAGATTAGTTAGAATG 59.086 37.037 0.00 0.00 0.00 2.67
4691 5200 7.378995 GCTACACGTACAGATTAGTTAGAATGG 59.621 40.741 0.00 0.00 0.00 3.16
4692 5201 6.570692 ACACGTACAGATTAGTTAGAATGGG 58.429 40.000 0.00 0.00 0.00 4.00
4693 5202 5.983720 CACGTACAGATTAGTTAGAATGGGG 59.016 44.000 0.00 0.00 0.00 4.96
4694 5203 5.895534 ACGTACAGATTAGTTAGAATGGGGA 59.104 40.000 0.00 0.00 0.00 4.81
4695 5204 6.183360 ACGTACAGATTAGTTAGAATGGGGAC 60.183 42.308 0.00 0.00 0.00 4.46
4696 5205 6.040616 CGTACAGATTAGTTAGAATGGGGACT 59.959 42.308 0.00 0.00 0.00 3.85
4697 5206 6.240549 ACAGATTAGTTAGAATGGGGACTG 57.759 41.667 0.00 0.00 0.00 3.51
4698 5207 5.131142 ACAGATTAGTTAGAATGGGGACTGG 59.869 44.000 0.00 0.00 0.00 4.00
4699 5208 4.660771 AGATTAGTTAGAATGGGGACTGGG 59.339 45.833 0.00 0.00 0.00 4.45
4700 5209 0.919710 AGTTAGAATGGGGACTGGGC 59.080 55.000 0.00 0.00 0.00 5.36
4701 5210 0.106669 GTTAGAATGGGGACTGGGCC 60.107 60.000 0.00 0.00 0.00 5.80
4702 5211 0.253630 TTAGAATGGGGACTGGGCCT 60.254 55.000 4.53 0.00 0.00 5.19
4703 5212 0.645496 TAGAATGGGGACTGGGCCTA 59.355 55.000 4.53 0.00 0.00 3.93
4704 5213 0.988678 AGAATGGGGACTGGGCCTAC 60.989 60.000 4.53 0.00 0.00 3.18
4705 5214 2.325393 GAATGGGGACTGGGCCTACG 62.325 65.000 4.53 0.00 0.00 3.51
4706 5215 3.635869 ATGGGGACTGGGCCTACGT 62.636 63.158 4.53 0.00 0.00 3.57
4712 5221 1.889530 GACTGGGCCTACGTCAAGCT 61.890 60.000 4.53 0.00 0.00 3.74
4713 5222 1.448540 CTGGGCCTACGTCAAGCTG 60.449 63.158 4.53 0.00 0.00 4.24
4715 5224 2.125106 GGCCTACGTCAAGCTGGG 60.125 66.667 0.00 0.00 0.00 4.45
4716 5225 2.656069 GGCCTACGTCAAGCTGGGA 61.656 63.158 0.00 0.00 0.00 4.37
4717 5226 1.295423 GCCTACGTCAAGCTGGGAA 59.705 57.895 0.00 0.00 0.00 3.97
4718 5227 0.321298 GCCTACGTCAAGCTGGGAAA 60.321 55.000 0.00 0.00 0.00 3.13
4735 5244 3.746940 GGAAACCTTTGCTACACCTACA 58.253 45.455 0.00 0.00 0.00 2.74
4736 5245 3.751698 GGAAACCTTTGCTACACCTACAG 59.248 47.826 0.00 0.00 0.00 2.74
5043 9585 7.111466 TCTAGAAGTTAAGAGGGTAGACTGTC 58.889 42.308 0.00 0.00 0.00 3.51
5054 9596 6.500751 AGAGGGTAGACTGTCAAGGAAATAAA 59.499 38.462 10.88 0.00 0.00 1.40
5119 9667 4.082949 AGCTACCATTTAAGACGGTTTTGC 60.083 41.667 0.00 0.00 34.12 3.68
5123 9671 4.583073 ACCATTTAAGACGGTTTTGCTCTT 59.417 37.500 0.00 0.00 0.00 2.85
5124 9672 5.766174 ACCATTTAAGACGGTTTTGCTCTTA 59.234 36.000 0.00 0.00 0.00 2.10
5152 9700 8.818141 AAGTAGATCATAACCATGTTATGACG 57.182 34.615 24.27 4.72 42.21 4.35
5509 11136 1.833630 TCACAAACAAATGTTGGGCCA 59.166 42.857 0.00 0.00 38.44 5.36
5589 11216 0.825425 CAGGAGGGATGCGAGCTCTA 60.825 60.000 12.85 0.58 0.00 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 3.157087 ACTAACATGCCACTTCCCAAAG 58.843 45.455 0.00 0.00 38.54 2.77
12 13 2.290323 ACTGGGACTAACATGCCACTTC 60.290 50.000 0.00 0.00 34.72 3.01
46 47 3.977999 TCCCATAAATAATCTCACCCCGT 59.022 43.478 0.00 0.00 0.00 5.28
47 48 4.634012 TCCCATAAATAATCTCACCCCG 57.366 45.455 0.00 0.00 0.00 5.73
72 73 8.971073 ACCTATCCTTCCTTTTATTTGTTCATG 58.029 33.333 0.00 0.00 0.00 3.07
74 75 8.950007 AACCTATCCTTCCTTTTATTTGTTCA 57.050 30.769 0.00 0.00 0.00 3.18
76 77 9.816787 TGTAACCTATCCTTCCTTTTATTTGTT 57.183 29.630 0.00 0.00 0.00 2.83
77 78 9.990868 ATGTAACCTATCCTTCCTTTTATTTGT 57.009 29.630 0.00 0.00 0.00 2.83
82 83 8.998814 TGATGATGTAACCTATCCTTCCTTTTA 58.001 33.333 0.00 0.00 0.00 1.52
83 84 7.872138 TGATGATGTAACCTATCCTTCCTTTT 58.128 34.615 0.00 0.00 0.00 2.27
84 85 7.420680 CCTGATGATGTAACCTATCCTTCCTTT 60.421 40.741 0.00 0.00 0.00 3.11
85 86 6.043706 CCTGATGATGTAACCTATCCTTCCTT 59.956 42.308 0.00 0.00 0.00 3.36
86 87 5.545723 CCTGATGATGTAACCTATCCTTCCT 59.454 44.000 0.00 0.00 0.00 3.36
87 88 5.280215 CCCTGATGATGTAACCTATCCTTCC 60.280 48.000 0.00 0.00 0.00 3.46
88 89 5.544176 TCCCTGATGATGTAACCTATCCTTC 59.456 44.000 0.00 0.00 0.00 3.46
89 90 5.476983 TCCCTGATGATGTAACCTATCCTT 58.523 41.667 0.00 0.00 0.00 3.36
90 91 5.090139 CTCCCTGATGATGTAACCTATCCT 58.910 45.833 0.00 0.00 0.00 3.24
91 92 4.841246 ACTCCCTGATGATGTAACCTATCC 59.159 45.833 0.00 0.00 0.00 2.59
92 93 6.722129 ACTACTCCCTGATGATGTAACCTATC 59.278 42.308 0.00 0.00 0.00 2.08
93 94 6.625267 ACTACTCCCTGATGATGTAACCTAT 58.375 40.000 0.00 0.00 0.00 2.57
94 95 6.027025 ACTACTCCCTGATGATGTAACCTA 57.973 41.667 0.00 0.00 0.00 3.08
95 96 4.884961 ACTACTCCCTGATGATGTAACCT 58.115 43.478 0.00 0.00 0.00 3.50
96 97 5.615925 AACTACTCCCTGATGATGTAACC 57.384 43.478 0.00 0.00 0.00 2.85
97 98 6.217294 GCTAACTACTCCCTGATGATGTAAC 58.783 44.000 0.00 0.00 0.00 2.50
98 99 5.009710 CGCTAACTACTCCCTGATGATGTAA 59.990 44.000 0.00 0.00 0.00 2.41
99 100 4.519350 CGCTAACTACTCCCTGATGATGTA 59.481 45.833 0.00 0.00 0.00 2.29
100 101 3.319405 CGCTAACTACTCCCTGATGATGT 59.681 47.826 0.00 0.00 0.00 3.06
101 102 3.858877 GCGCTAACTACTCCCTGATGATG 60.859 52.174 0.00 0.00 0.00 3.07
102 103 2.297597 GCGCTAACTACTCCCTGATGAT 59.702 50.000 0.00 0.00 0.00 2.45
103 104 1.681793 GCGCTAACTACTCCCTGATGA 59.318 52.381 0.00 0.00 0.00 2.92
104 105 1.683917 AGCGCTAACTACTCCCTGATG 59.316 52.381 8.99 0.00 0.00 3.07
105 106 1.683917 CAGCGCTAACTACTCCCTGAT 59.316 52.381 10.99 0.00 0.00 2.90
106 107 1.103803 CAGCGCTAACTACTCCCTGA 58.896 55.000 10.99 0.00 0.00 3.86
107 108 0.103208 CCAGCGCTAACTACTCCCTG 59.897 60.000 10.99 0.00 0.00 4.45
108 109 1.677637 GCCAGCGCTAACTACTCCCT 61.678 60.000 10.99 0.00 0.00 4.20
109 110 1.227292 GCCAGCGCTAACTACTCCC 60.227 63.158 10.99 0.00 0.00 4.30
110 111 1.227292 GGCCAGCGCTAACTACTCC 60.227 63.158 10.99 0.00 34.44 3.85
111 112 0.528684 CTGGCCAGCGCTAACTACTC 60.529 60.000 22.33 0.00 34.44 2.59
112 113 1.258445 ACTGGCCAGCGCTAACTACT 61.258 55.000 33.06 5.96 34.44 2.57
113 114 0.391263 AACTGGCCAGCGCTAACTAC 60.391 55.000 33.06 0.00 34.44 2.73
114 115 1.136305 CTAACTGGCCAGCGCTAACTA 59.864 52.381 33.06 11.19 34.44 2.24
115 116 0.108138 CTAACTGGCCAGCGCTAACT 60.108 55.000 33.06 8.48 34.44 2.24
116 117 0.391263 ACTAACTGGCCAGCGCTAAC 60.391 55.000 33.06 4.63 34.44 2.34
117 118 0.323629 AACTAACTGGCCAGCGCTAA 59.676 50.000 33.06 12.37 34.44 3.09
118 119 0.323629 AAACTAACTGGCCAGCGCTA 59.676 50.000 33.06 19.38 34.44 4.26
119 120 1.073199 AAACTAACTGGCCAGCGCT 59.927 52.632 33.06 19.30 34.44 5.92
120 121 1.210155 CAAACTAACTGGCCAGCGC 59.790 57.895 33.06 0.00 0.00 5.92
121 122 0.605319 TCCAAACTAACTGGCCAGCG 60.605 55.000 33.06 22.32 33.63 5.18
122 123 1.168714 CTCCAAACTAACTGGCCAGC 58.831 55.000 33.06 0.00 33.63 4.85
123 124 1.351017 TCCTCCAAACTAACTGGCCAG 59.649 52.381 31.60 31.60 33.63 4.85
124 125 1.440618 TCCTCCAAACTAACTGGCCA 58.559 50.000 4.71 4.71 33.63 5.36
125 126 2.579410 TTCCTCCAAACTAACTGGCC 57.421 50.000 0.00 0.00 33.63 5.36
126 127 5.221441 ACAAAATTCCTCCAAACTAACTGGC 60.221 40.000 0.00 0.00 33.63 4.85
127 128 6.405278 ACAAAATTCCTCCAAACTAACTGG 57.595 37.500 0.00 0.00 35.05 4.00
128 129 6.200854 GCAACAAAATTCCTCCAAACTAACTG 59.799 38.462 0.00 0.00 0.00 3.16
129 130 6.280643 GCAACAAAATTCCTCCAAACTAACT 58.719 36.000 0.00 0.00 0.00 2.24
130 131 5.174943 CGCAACAAAATTCCTCCAAACTAAC 59.825 40.000 0.00 0.00 0.00 2.34
131 132 5.285651 CGCAACAAAATTCCTCCAAACTAA 58.714 37.500 0.00 0.00 0.00 2.24
132 133 4.261825 CCGCAACAAAATTCCTCCAAACTA 60.262 41.667 0.00 0.00 0.00 2.24
133 134 3.492482 CCGCAACAAAATTCCTCCAAACT 60.492 43.478 0.00 0.00 0.00 2.66
134 135 2.799978 CCGCAACAAAATTCCTCCAAAC 59.200 45.455 0.00 0.00 0.00 2.93
135 136 2.224161 CCCGCAACAAAATTCCTCCAAA 60.224 45.455 0.00 0.00 0.00 3.28
136 137 1.342819 CCCGCAACAAAATTCCTCCAA 59.657 47.619 0.00 0.00 0.00 3.53
137 138 0.965439 CCCGCAACAAAATTCCTCCA 59.035 50.000 0.00 0.00 0.00 3.86
138 139 1.202348 CTCCCGCAACAAAATTCCTCC 59.798 52.381 0.00 0.00 0.00 4.30
139 140 1.202348 CCTCCCGCAACAAAATTCCTC 59.798 52.381 0.00 0.00 0.00 3.71
140 141 1.256812 CCTCCCGCAACAAAATTCCT 58.743 50.000 0.00 0.00 0.00 3.36
141 142 0.966179 ACCTCCCGCAACAAAATTCC 59.034 50.000 0.00 0.00 0.00 3.01
142 143 1.336795 CCACCTCCCGCAACAAAATTC 60.337 52.381 0.00 0.00 0.00 2.17
143 144 0.678950 CCACCTCCCGCAACAAAATT 59.321 50.000 0.00 0.00 0.00 1.82
144 145 1.184970 CCCACCTCCCGCAACAAAAT 61.185 55.000 0.00 0.00 0.00 1.82
145 146 1.830408 CCCACCTCCCGCAACAAAA 60.830 57.895 0.00 0.00 0.00 2.44
146 147 2.203422 CCCACCTCCCGCAACAAA 60.203 61.111 0.00 0.00 0.00 2.83
147 148 4.966787 GCCCACCTCCCGCAACAA 62.967 66.667 0.00 0.00 0.00 2.83
159 160 3.957497 TCATTACATATTTGGTGGCCCAC 59.043 43.478 4.93 4.93 41.67 4.61
160 161 4.256983 TCATTACATATTTGGTGGCCCA 57.743 40.909 0.00 0.00 39.65 5.36
161 162 8.766994 ATATATCATTACATATTTGGTGGCCC 57.233 34.615 0.00 0.00 0.00 5.80
179 180 9.199982 GGGAATTCGACGTCTAAAAATATATCA 57.800 33.333 14.70 0.00 0.00 2.15
180 181 9.199982 TGGGAATTCGACGTCTAAAAATATATC 57.800 33.333 14.70 3.52 0.00 1.63
181 182 9.720769 ATGGGAATTCGACGTCTAAAAATATAT 57.279 29.630 14.70 0.00 0.00 0.86
182 183 9.550406 AATGGGAATTCGACGTCTAAAAATATA 57.450 29.630 14.70 0.00 0.00 0.86
183 184 8.446599 AATGGGAATTCGACGTCTAAAAATAT 57.553 30.769 14.70 0.00 0.00 1.28
184 185 7.011669 GGAATGGGAATTCGACGTCTAAAAATA 59.988 37.037 14.70 0.00 0.00 1.40
185 186 6.183360 GGAATGGGAATTCGACGTCTAAAAAT 60.183 38.462 14.70 5.38 0.00 1.82
186 187 5.122711 GGAATGGGAATTCGACGTCTAAAAA 59.877 40.000 14.70 3.15 0.00 1.94
187 188 4.632688 GGAATGGGAATTCGACGTCTAAAA 59.367 41.667 14.70 5.70 0.00 1.52
188 189 4.081309 AGGAATGGGAATTCGACGTCTAAA 60.081 41.667 14.70 8.31 0.00 1.85
189 190 3.449737 AGGAATGGGAATTCGACGTCTAA 59.550 43.478 14.70 9.72 0.00 2.10
190 191 3.028850 AGGAATGGGAATTCGACGTCTA 58.971 45.455 14.70 0.00 0.00 2.59
191 192 1.831736 AGGAATGGGAATTCGACGTCT 59.168 47.619 14.70 0.00 0.00 4.18
192 193 2.202566 GAGGAATGGGAATTCGACGTC 58.797 52.381 5.18 5.18 0.00 4.34
193 194 1.134491 GGAGGAATGGGAATTCGACGT 60.134 52.381 0.00 0.00 0.00 4.34
194 195 1.583054 GGAGGAATGGGAATTCGACG 58.417 55.000 0.00 0.00 0.00 5.12
195 196 1.583054 CGGAGGAATGGGAATTCGAC 58.417 55.000 0.00 0.00 0.00 4.20
196 197 0.179056 GCGGAGGAATGGGAATTCGA 60.179 55.000 0.00 0.00 0.00 3.71
197 198 0.179045 AGCGGAGGAATGGGAATTCG 60.179 55.000 0.00 0.00 0.00 3.34
198 199 1.134098 TCAGCGGAGGAATGGGAATTC 60.134 52.381 0.00 0.00 0.00 2.17
199 200 0.918983 TCAGCGGAGGAATGGGAATT 59.081 50.000 0.00 0.00 0.00 2.17
200 201 0.918983 TTCAGCGGAGGAATGGGAAT 59.081 50.000 0.00 0.00 0.00 3.01
201 202 0.918983 ATTCAGCGGAGGAATGGGAA 59.081 50.000 0.00 0.00 33.88 3.97
202 203 0.918983 AATTCAGCGGAGGAATGGGA 59.081 50.000 0.00 0.00 35.28 4.37
203 204 2.222027 GTAATTCAGCGGAGGAATGGG 58.778 52.381 0.00 0.00 35.28 4.00
204 205 2.222027 GGTAATTCAGCGGAGGAATGG 58.778 52.381 0.00 0.00 35.28 3.16
205 206 2.874701 CTGGTAATTCAGCGGAGGAATG 59.125 50.000 0.00 0.00 35.28 2.67
206 207 2.158755 CCTGGTAATTCAGCGGAGGAAT 60.159 50.000 0.00 0.00 36.57 3.01
207 208 1.209504 CCTGGTAATTCAGCGGAGGAA 59.790 52.381 0.00 0.00 32.37 3.36
208 209 0.830648 CCTGGTAATTCAGCGGAGGA 59.169 55.000 0.00 0.00 32.37 3.71
209 210 0.815615 GCCTGGTAATTCAGCGGAGG 60.816 60.000 0.00 0.00 32.37 4.30
210 211 0.179000 AGCCTGGTAATTCAGCGGAG 59.821 55.000 0.00 0.00 32.37 4.63
211 212 0.178068 GAGCCTGGTAATTCAGCGGA 59.822 55.000 0.00 0.00 32.37 5.54
212 213 0.815615 GGAGCCTGGTAATTCAGCGG 60.816 60.000 0.00 0.00 33.64 5.52
213 214 0.815615 GGGAGCCTGGTAATTCAGCG 60.816 60.000 0.00 0.00 33.64 5.18
214 215 0.466372 GGGGAGCCTGGTAATTCAGC 60.466 60.000 0.00 0.00 33.64 4.26
215 216 0.183731 GGGGGAGCCTGGTAATTCAG 59.816 60.000 0.00 0.00 34.70 3.02
216 217 1.632018 CGGGGGAGCCTGGTAATTCA 61.632 60.000 0.00 0.00 0.00 2.57
217 218 1.148498 CGGGGGAGCCTGGTAATTC 59.852 63.158 0.00 0.00 0.00 2.17
218 219 2.383601 CCGGGGGAGCCTGGTAATT 61.384 63.158 0.00 0.00 0.00 1.40
219 220 2.772622 CCGGGGGAGCCTGGTAAT 60.773 66.667 0.00 0.00 0.00 1.89
220 221 4.342086 ACCGGGGGAGCCTGGTAA 62.342 66.667 6.32 0.00 46.54 2.85
223 224 3.480133 CTAACCGGGGGAGCCTGG 61.480 72.222 6.32 0.00 41.74 4.45
224 225 2.365105 TCTAACCGGGGGAGCCTG 60.365 66.667 6.32 0.00 0.00 4.85
225 226 1.962570 ATCTCTAACCGGGGGAGCCT 61.963 60.000 6.32 0.00 0.00 4.58
226 227 1.459730 ATCTCTAACCGGGGGAGCC 60.460 63.158 6.32 0.00 0.00 4.70
227 228 1.807495 CGATCTCTAACCGGGGGAGC 61.807 65.000 6.32 0.00 0.00 4.70
228 229 0.178998 TCGATCTCTAACCGGGGGAG 60.179 60.000 6.32 10.28 0.00 4.30
229 230 0.481567 ATCGATCTCTAACCGGGGGA 59.518 55.000 6.32 0.00 0.00 4.81
230 231 0.603569 CATCGATCTCTAACCGGGGG 59.396 60.000 6.32 0.00 0.00 5.40
231 232 0.603569 CCATCGATCTCTAACCGGGG 59.396 60.000 6.32 0.00 0.00 5.73
232 233 0.603569 CCCATCGATCTCTAACCGGG 59.396 60.000 6.32 0.00 0.00 5.73
233 234 1.542030 CTCCCATCGATCTCTAACCGG 59.458 57.143 0.00 0.00 0.00 5.28
234 235 2.231529 ACTCCCATCGATCTCTAACCG 58.768 52.381 0.00 0.00 0.00 4.44
235 236 3.243907 CCAACTCCCATCGATCTCTAACC 60.244 52.174 0.00 0.00 0.00 2.85
236 237 3.800604 GCCAACTCCCATCGATCTCTAAC 60.801 52.174 0.00 0.00 0.00 2.34
237 238 2.365617 GCCAACTCCCATCGATCTCTAA 59.634 50.000 0.00 0.00 0.00 2.10
238 239 1.964223 GCCAACTCCCATCGATCTCTA 59.036 52.381 0.00 0.00 0.00 2.43
239 240 0.755686 GCCAACTCCCATCGATCTCT 59.244 55.000 0.00 0.00 0.00 3.10
240 241 0.250081 GGCCAACTCCCATCGATCTC 60.250 60.000 0.00 0.00 0.00 2.75
241 242 1.700042 GGGCCAACTCCCATCGATCT 61.700 60.000 4.39 0.00 45.82 2.75
242 243 1.227973 GGGCCAACTCCCATCGATC 60.228 63.158 4.39 0.00 45.82 3.69
243 244 2.919043 GGGCCAACTCCCATCGAT 59.081 61.111 4.39 0.00 45.82 3.59
251 252 0.474614 GGGATTAGGAGGGCCAACTC 59.525 60.000 6.18 2.10 36.29 3.01
252 253 0.994050 GGGGATTAGGAGGGCCAACT 60.994 60.000 6.18 5.67 36.29 3.16
253 254 1.537172 GGGGATTAGGAGGGCCAAC 59.463 63.158 6.18 0.00 36.29 3.77
254 255 1.699930 GGGGGATTAGGAGGGCCAA 60.700 63.158 6.18 0.00 36.29 4.52
255 256 2.038762 GGGGGATTAGGAGGGCCA 60.039 66.667 6.18 0.00 36.29 5.36
256 257 1.387492 AAGGGGGATTAGGAGGGCC 60.387 63.158 0.00 0.00 0.00 5.80
257 258 1.427895 GGAAGGGGGATTAGGAGGGC 61.428 65.000 0.00 0.00 0.00 5.19
258 259 0.772517 GGGAAGGGGGATTAGGAGGG 60.773 65.000 0.00 0.00 0.00 4.30
259 260 0.772517 GGGGAAGGGGGATTAGGAGG 60.773 65.000 0.00 0.00 0.00 4.30
260 261 0.272235 AGGGGAAGGGGGATTAGGAG 59.728 60.000 0.00 0.00 0.00 3.69
261 262 0.735095 AAGGGGAAGGGGGATTAGGA 59.265 55.000 0.00 0.00 0.00 2.94
262 263 1.149986 GAAGGGGAAGGGGGATTAGG 58.850 60.000 0.00 0.00 0.00 2.69
263 264 1.149986 GGAAGGGGAAGGGGGATTAG 58.850 60.000 0.00 0.00 0.00 1.73
264 265 0.329138 GGGAAGGGGAAGGGGGATTA 60.329 60.000 0.00 0.00 0.00 1.75
265 266 1.625879 GGGAAGGGGAAGGGGGATT 60.626 63.158 0.00 0.00 0.00 3.01
266 267 2.046335 GGGAAGGGGAAGGGGGAT 59.954 66.667 0.00 0.00 0.00 3.85
267 268 2.836715 AAGGGAAGGGGAAGGGGGA 61.837 63.158 0.00 0.00 0.00 4.81
268 269 2.204464 AAGGGAAGGGGAAGGGGG 60.204 66.667 0.00 0.00 0.00 5.40
269 270 3.100111 CAAGGGAAGGGGAAGGGG 58.900 66.667 0.00 0.00 0.00 4.79
270 271 0.919289 TAGCAAGGGAAGGGGAAGGG 60.919 60.000 0.00 0.00 0.00 3.95
271 272 0.999712 TTAGCAAGGGAAGGGGAAGG 59.000 55.000 0.00 0.00 0.00 3.46
272 273 3.291584 GAATTAGCAAGGGAAGGGGAAG 58.708 50.000 0.00 0.00 0.00 3.46
273 274 2.024369 GGAATTAGCAAGGGAAGGGGAA 60.024 50.000 0.00 0.00 0.00 3.97
274 275 1.569072 GGAATTAGCAAGGGAAGGGGA 59.431 52.381 0.00 0.00 0.00 4.81
275 276 1.411644 GGGAATTAGCAAGGGAAGGGG 60.412 57.143 0.00 0.00 0.00 4.79
276 277 1.287739 TGGGAATTAGCAAGGGAAGGG 59.712 52.381 0.00 0.00 0.00 3.95
277 278 2.826674 TGGGAATTAGCAAGGGAAGG 57.173 50.000 0.00 0.00 0.00 3.46
278 279 3.195610 GGTTTGGGAATTAGCAAGGGAAG 59.804 47.826 0.00 0.00 0.00 3.46
279 280 3.169908 GGTTTGGGAATTAGCAAGGGAA 58.830 45.455 0.00 0.00 0.00 3.97
280 281 2.558800 GGGTTTGGGAATTAGCAAGGGA 60.559 50.000 0.00 0.00 0.00 4.20
281 282 1.831106 GGGTTTGGGAATTAGCAAGGG 59.169 52.381 0.00 0.00 0.00 3.95
282 283 1.831106 GGGGTTTGGGAATTAGCAAGG 59.169 52.381 0.00 0.00 0.00 3.61
283 284 2.497273 CAGGGGTTTGGGAATTAGCAAG 59.503 50.000 0.00 0.00 0.00 4.01
284 285 2.110899 TCAGGGGTTTGGGAATTAGCAA 59.889 45.455 0.00 0.00 0.00 3.91
285 286 1.713647 TCAGGGGTTTGGGAATTAGCA 59.286 47.619 0.00 0.00 0.00 3.49
286 287 2.496070 GTTCAGGGGTTTGGGAATTAGC 59.504 50.000 0.00 0.00 0.00 3.09
287 288 3.096852 GGTTCAGGGGTTTGGGAATTAG 58.903 50.000 0.00 0.00 0.00 1.73
288 289 2.451273 TGGTTCAGGGGTTTGGGAATTA 59.549 45.455 0.00 0.00 0.00 1.40
289 290 1.221781 TGGTTCAGGGGTTTGGGAATT 59.778 47.619 0.00 0.00 0.00 2.17
290 291 0.863956 TGGTTCAGGGGTTTGGGAAT 59.136 50.000 0.00 0.00 0.00 3.01
291 292 0.637195 TTGGTTCAGGGGTTTGGGAA 59.363 50.000 0.00 0.00 0.00 3.97
292 293 0.863956 ATTGGTTCAGGGGTTTGGGA 59.136 50.000 0.00 0.00 0.00 4.37
293 294 1.266178 GATTGGTTCAGGGGTTTGGG 58.734 55.000 0.00 0.00 0.00 4.12
294 295 2.008242 TGATTGGTTCAGGGGTTTGG 57.992 50.000 0.00 0.00 0.00 3.28
295 296 2.288152 CGTTGATTGGTTCAGGGGTTTG 60.288 50.000 0.00 0.00 35.27 2.93
296 297 1.960689 CGTTGATTGGTTCAGGGGTTT 59.039 47.619 0.00 0.00 35.27 3.27
297 298 1.616159 CGTTGATTGGTTCAGGGGTT 58.384 50.000 0.00 0.00 35.27 4.11
298 299 0.251165 CCGTTGATTGGTTCAGGGGT 60.251 55.000 0.00 0.00 35.27 4.95
299 300 0.037590 TCCGTTGATTGGTTCAGGGG 59.962 55.000 0.00 0.00 35.27 4.79
300 301 2.128771 ATCCGTTGATTGGTTCAGGG 57.871 50.000 0.00 0.00 35.27 4.45
301 302 4.519540 AAAATCCGTTGATTGGTTCAGG 57.480 40.909 0.00 0.00 40.34 3.86
302 303 6.677913 ACTAAAAATCCGTTGATTGGTTCAG 58.322 36.000 0.00 0.00 40.34 3.02
303 304 6.488683 AGACTAAAAATCCGTTGATTGGTTCA 59.511 34.615 0.00 0.00 40.34 3.18
304 305 6.909909 AGACTAAAAATCCGTTGATTGGTTC 58.090 36.000 0.00 0.00 40.34 3.62
305 306 6.488683 TGAGACTAAAAATCCGTTGATTGGTT 59.511 34.615 0.00 0.00 40.34 3.67
306 307 6.001460 TGAGACTAAAAATCCGTTGATTGGT 58.999 36.000 0.00 0.00 40.34 3.67
307 308 6.149474 AGTGAGACTAAAAATCCGTTGATTGG 59.851 38.462 0.00 0.00 40.34 3.16
308 309 7.133891 AGTGAGACTAAAAATCCGTTGATTG 57.866 36.000 0.00 0.00 40.34 2.67
309 310 8.842358 TTAGTGAGACTAAAAATCCGTTGATT 57.158 30.769 0.00 0.00 37.71 2.57
310 311 9.099454 GATTAGTGAGACTAAAAATCCGTTGAT 57.901 33.333 0.51 0.00 43.16 2.57
311 312 8.311836 AGATTAGTGAGACTAAAAATCCGTTGA 58.688 33.333 0.51 0.00 43.16 3.18
312 313 8.480643 AGATTAGTGAGACTAAAAATCCGTTG 57.519 34.615 0.51 0.00 43.16 4.10
320 321 9.939802 GGGAGTTTAAGATTAGTGAGACTAAAA 57.060 33.333 0.51 0.00 43.16 1.52
321 322 9.096823 TGGGAGTTTAAGATTAGTGAGACTAAA 57.903 33.333 0.51 0.00 43.16 1.85
322 323 8.660295 TGGGAGTTTAAGATTAGTGAGACTAA 57.340 34.615 0.00 0.00 43.95 2.24
323 324 8.840200 ATGGGAGTTTAAGATTAGTGAGACTA 57.160 34.615 0.00 0.00 0.00 2.59
324 325 7.741554 ATGGGAGTTTAAGATTAGTGAGACT 57.258 36.000 0.00 0.00 0.00 3.24
325 326 7.496263 GGAATGGGAGTTTAAGATTAGTGAGAC 59.504 40.741 0.00 0.00 0.00 3.36
326 327 7.365652 GGGAATGGGAGTTTAAGATTAGTGAGA 60.366 40.741 0.00 0.00 0.00 3.27
327 328 6.768381 GGGAATGGGAGTTTAAGATTAGTGAG 59.232 42.308 0.00 0.00 0.00 3.51
328 329 6.447084 AGGGAATGGGAGTTTAAGATTAGTGA 59.553 38.462 0.00 0.00 0.00 3.41
329 330 6.663734 AGGGAATGGGAGTTTAAGATTAGTG 58.336 40.000 0.00 0.00 0.00 2.74
330 331 6.910259 AGGGAATGGGAGTTTAAGATTAGT 57.090 37.500 0.00 0.00 0.00 2.24
331 332 7.225011 GGTAGGGAATGGGAGTTTAAGATTAG 58.775 42.308 0.00 0.00 0.00 1.73
332 333 6.102174 GGGTAGGGAATGGGAGTTTAAGATTA 59.898 42.308 0.00 0.00 0.00 1.75
333 334 5.103643 GGGTAGGGAATGGGAGTTTAAGATT 60.104 44.000 0.00 0.00 0.00 2.40
334 335 4.415846 GGGTAGGGAATGGGAGTTTAAGAT 59.584 45.833 0.00 0.00 0.00 2.40
335 336 3.784202 GGGTAGGGAATGGGAGTTTAAGA 59.216 47.826 0.00 0.00 0.00 2.10
336 337 3.117625 GGGGTAGGGAATGGGAGTTTAAG 60.118 52.174 0.00 0.00 0.00 1.85
337 338 2.854337 GGGGTAGGGAATGGGAGTTTAA 59.146 50.000 0.00 0.00 0.00 1.52
338 339 2.495227 GGGGTAGGGAATGGGAGTTTA 58.505 52.381 0.00 0.00 0.00 2.01
339 340 1.305886 GGGGTAGGGAATGGGAGTTT 58.694 55.000 0.00 0.00 0.00 2.66
340 341 0.626574 GGGGGTAGGGAATGGGAGTT 60.627 60.000 0.00 0.00 0.00 3.01
341 342 1.005690 GGGGGTAGGGAATGGGAGT 59.994 63.158 0.00 0.00 0.00 3.85
342 343 0.626277 TTGGGGGTAGGGAATGGGAG 60.626 60.000 0.00 0.00 0.00 4.30
343 344 0.922243 GTTGGGGGTAGGGAATGGGA 60.922 60.000 0.00 0.00 0.00 4.37
344 345 0.924226 AGTTGGGGGTAGGGAATGGG 60.924 60.000 0.00 0.00 0.00 4.00
345 346 0.551396 GAGTTGGGGGTAGGGAATGG 59.449 60.000 0.00 0.00 0.00 3.16
346 347 0.551396 GGAGTTGGGGGTAGGGAATG 59.449 60.000 0.00 0.00 0.00 2.67
347 348 0.626574 GGGAGTTGGGGGTAGGGAAT 60.627 60.000 0.00 0.00 0.00 3.01
348 349 1.230050 GGGAGTTGGGGGTAGGGAA 60.230 63.158 0.00 0.00 0.00 3.97
349 350 2.457794 GGGAGTTGGGGGTAGGGA 59.542 66.667 0.00 0.00 0.00 4.20
350 351 2.694992 GGGGAGTTGGGGGTAGGG 60.695 72.222 0.00 0.00 0.00 3.53
351 352 2.694992 GGGGGAGTTGGGGGTAGG 60.695 72.222 0.00 0.00 0.00 3.18
352 353 1.143970 TTTGGGGGAGTTGGGGGTAG 61.144 60.000 0.00 0.00 0.00 3.18
353 354 1.072063 TTTGGGGGAGTTGGGGGTA 60.072 57.895 0.00 0.00 0.00 3.69
354 355 2.371811 TTTGGGGGAGTTGGGGGT 60.372 61.111 0.00 0.00 0.00 4.95
355 356 2.119611 GTTTGGGGGAGTTGGGGG 59.880 66.667 0.00 0.00 0.00 5.40
356 357 2.119611 GGTTTGGGGGAGTTGGGG 59.880 66.667 0.00 0.00 0.00 4.96
357 358 0.399233 TTTGGTTTGGGGGAGTTGGG 60.399 55.000 0.00 0.00 0.00 4.12
358 359 0.756294 GTTTGGTTTGGGGGAGTTGG 59.244 55.000 0.00 0.00 0.00 3.77
359 360 1.138069 GTGTTTGGTTTGGGGGAGTTG 59.862 52.381 0.00 0.00 0.00 3.16
360 361 1.491668 GTGTTTGGTTTGGGGGAGTT 58.508 50.000 0.00 0.00 0.00 3.01
361 362 0.753848 CGTGTTTGGTTTGGGGGAGT 60.754 55.000 0.00 0.00 0.00 3.85
362 363 2.037871 CGTGTTTGGTTTGGGGGAG 58.962 57.895 0.00 0.00 0.00 4.30
363 364 2.128507 GCGTGTTTGGTTTGGGGGA 61.129 57.895 0.00 0.00 0.00 4.81
364 365 2.131067 AGCGTGTTTGGTTTGGGGG 61.131 57.895 0.00 0.00 0.00 5.40
365 366 1.067250 CAGCGTGTTTGGTTTGGGG 59.933 57.895 0.00 0.00 0.00 4.96
366 367 0.527385 CACAGCGTGTTTGGTTTGGG 60.527 55.000 1.24 0.00 0.00 4.12
367 368 0.453793 TCACAGCGTGTTTGGTTTGG 59.546 50.000 8.22 0.00 34.79 3.28
368 369 2.159448 TCTTCACAGCGTGTTTGGTTTG 60.159 45.455 8.22 0.00 34.79 2.93
369 370 2.088423 TCTTCACAGCGTGTTTGGTTT 58.912 42.857 8.22 0.00 34.79 3.27
370 371 1.745232 TCTTCACAGCGTGTTTGGTT 58.255 45.000 8.22 0.00 34.79 3.67
371 372 1.967319 ATCTTCACAGCGTGTTTGGT 58.033 45.000 8.22 0.00 34.79 3.67
372 373 3.325870 TCTATCTTCACAGCGTGTTTGG 58.674 45.455 8.22 0.22 34.79 3.28
373 374 5.319139 CAATCTATCTTCACAGCGTGTTTG 58.681 41.667 8.22 0.00 34.79 2.93
374 375 4.393062 CCAATCTATCTTCACAGCGTGTTT 59.607 41.667 8.22 0.00 34.79 2.83
375 376 3.935203 CCAATCTATCTTCACAGCGTGTT 59.065 43.478 8.22 0.00 34.79 3.32
376 377 3.055819 ACCAATCTATCTTCACAGCGTGT 60.056 43.478 8.22 0.00 34.79 4.49
377 378 3.308053 CACCAATCTATCTTCACAGCGTG 59.692 47.826 2.79 2.79 34.45 5.34
378 379 3.525537 CACCAATCTATCTTCACAGCGT 58.474 45.455 0.00 0.00 0.00 5.07
379 380 2.868583 CCACCAATCTATCTTCACAGCG 59.131 50.000 0.00 0.00 0.00 5.18
380 381 2.615912 GCCACCAATCTATCTTCACAGC 59.384 50.000 0.00 0.00 0.00 4.40
381 382 3.875727 CTGCCACCAATCTATCTTCACAG 59.124 47.826 0.00 0.00 0.00 3.66
382 383 3.370846 CCTGCCACCAATCTATCTTCACA 60.371 47.826 0.00 0.00 0.00 3.58
383 384 3.209410 CCTGCCACCAATCTATCTTCAC 58.791 50.000 0.00 0.00 0.00 3.18
391 392 2.036256 GCCACCTGCCACCAATCT 59.964 61.111 0.00 0.00 0.00 2.40
510 511 1.624813 CTGGCATCCAAACCCAACATT 59.375 47.619 0.00 0.00 30.80 2.71
516 517 0.251787 AAGACCTGGCATCCAAACCC 60.252 55.000 0.00 0.00 30.80 4.11
528 529 6.539103 GTCTAGCCTAATACCAAAAAGACCTG 59.461 42.308 0.00 0.00 0.00 4.00
535 536 7.442656 GCTGATAGTCTAGCCTAATACCAAAA 58.557 38.462 0.00 0.00 33.89 2.44
549 550 1.789523 AAAGGGGCGCTGATAGTCTA 58.210 50.000 7.64 0.00 0.00 2.59
568 570 4.337555 GTCGCTACTCCTAACCAGTTGATA 59.662 45.833 0.00 0.00 0.00 2.15
629 634 6.119536 TCACACAAGACCTTACAAAGTCATT 58.880 36.000 0.00 0.00 0.00 2.57
687 692 0.772124 AGGACCCCTGGCTTCTTCAA 60.772 55.000 0.00 0.00 29.57 2.69
690 695 1.925972 GGAGGACCCCTGGCTTCTT 60.926 63.158 0.00 0.00 31.76 2.52
694 699 4.423209 GGAGGAGGACCCCTGGCT 62.423 72.222 6.27 0.00 36.49 4.75
722 727 8.545749 TTATACGAACGAGGTTTTTGTTTTTC 57.454 30.769 0.14 0.00 33.40 2.29
738 747 5.298777 TCCTGAGTTCTAGCCTTATACGAAC 59.701 44.000 0.00 0.00 35.44 3.95
740 749 5.045012 TCCTGAGTTCTAGCCTTATACGA 57.955 43.478 0.00 0.00 0.00 3.43
1386 1470 1.068417 CCCGGACACGACAAAGTCA 59.932 57.895 0.73 0.00 44.60 3.41
1753 1858 0.627451 TCTAGGTTCTGGTAGGCCGA 59.373 55.000 0.00 0.00 37.67 5.54
1769 1874 5.561145 GCGCAGAAGAATCTTAGATCGTCTA 60.561 44.000 0.30 0.00 33.54 2.59
1781 1886 1.201343 GTACGAGGCGCAGAAGAATC 58.799 55.000 10.83 0.00 0.00 2.52
1905 2121 4.103469 TCACCATCATCATCATCACCATCA 59.897 41.667 0.00 0.00 0.00 3.07
1906 2122 4.648651 TCACCATCATCATCATCACCATC 58.351 43.478 0.00 0.00 0.00 3.51
1908 2124 3.181448 CCTCACCATCATCATCATCACCA 60.181 47.826 0.00 0.00 0.00 4.17
1910 2126 4.347360 TCCTCACCATCATCATCATCAC 57.653 45.455 0.00 0.00 0.00 3.06
1911 2127 4.595781 TCATCCTCACCATCATCATCATCA 59.404 41.667 0.00 0.00 0.00 3.07
2012 2256 1.002430 ACCTCGCATCTTTCTGCTTCA 59.998 47.619 0.00 0.00 40.06 3.02
2178 2422 3.365265 GGTCTGCCTTGTTGCCGG 61.365 66.667 0.00 0.00 0.00 6.13
2530 2789 5.038683 TGATGGTACGATACGAATGACAAC 58.961 41.667 0.00 0.00 0.00 3.32
2690 2949 2.536365 CACGTACCGTTGACATGCTAT 58.464 47.619 0.00 0.00 38.32 2.97
3298 3731 1.467543 CGACGACGATGACAATGACCT 60.468 52.381 0.00 0.00 42.66 3.85
3305 3738 1.731613 GGCAACGACGACGATGACA 60.732 57.895 20.02 0.00 46.87 3.58
3307 3740 1.006825 CTTGGCAACGACGACGATGA 61.007 55.000 20.02 0.00 43.20 2.92
3308 3741 1.416049 CTTGGCAACGACGACGATG 59.584 57.895 15.32 13.82 43.34 3.84
3309 3742 2.380410 GCTTGGCAACGACGACGAT 61.380 57.895 15.32 0.00 42.66 3.73
3374 3810 0.684479 AGCATCGCTGGTCTCCACTA 60.684 55.000 0.00 0.00 37.57 2.74
3927 4434 1.741770 GGTCCTCGAACGCTTGCAT 60.742 57.895 0.00 0.00 0.00 3.96
4248 4755 1.476891 GACCATTGTCTCGTAGCCAGA 59.523 52.381 0.00 0.00 38.53 3.86
4394 4901 1.302949 CCTTCCCTGATGGCGGAAA 59.697 57.895 0.00 0.00 37.69 3.13
4438 4945 2.016318 CGACAATATTTCCCTGCAGCA 58.984 47.619 8.66 0.00 0.00 4.41
4480 4987 1.893786 CACGGCTGCTTCCTACTCT 59.106 57.895 0.00 0.00 0.00 3.24
4544 5051 1.071987 CTCTGTGAAGGCTGCCACA 59.928 57.895 22.65 17.19 40.56 4.17
4652 5161 1.070175 CGTGTAGCAAAGGTTTCACCG 60.070 52.381 0.00 0.00 44.90 4.94
4672 5181 7.210873 CAGTCCCCATTCTAACTAATCTGTAC 58.789 42.308 0.00 0.00 0.00 2.90
4678 5187 3.138468 GCCCAGTCCCCATTCTAACTAAT 59.862 47.826 0.00 0.00 0.00 1.73
4679 5188 2.508300 GCCCAGTCCCCATTCTAACTAA 59.492 50.000 0.00 0.00 0.00 2.24
4680 5189 2.124411 GCCCAGTCCCCATTCTAACTA 58.876 52.381 0.00 0.00 0.00 2.24
4687 5196 2.375345 CGTAGGCCCAGTCCCCATT 61.375 63.158 0.00 0.00 0.00 3.16
4690 5199 3.468140 GACGTAGGCCCAGTCCCC 61.468 72.222 0.00 0.00 0.00 4.81
4691 5200 2.240162 CTTGACGTAGGCCCAGTCCC 62.240 65.000 16.96 0.00 34.24 4.46
4692 5201 1.218316 CTTGACGTAGGCCCAGTCC 59.782 63.158 16.96 0.00 34.24 3.85
4693 5202 1.448013 GCTTGACGTAGGCCCAGTC 60.448 63.158 13.93 13.93 35.61 3.51
4694 5203 1.913762 AGCTTGACGTAGGCCCAGT 60.914 57.895 0.00 0.00 30.33 4.00
4695 5204 1.448540 CAGCTTGACGTAGGCCCAG 60.449 63.158 0.00 0.00 30.33 4.45
4696 5205 2.662596 CAGCTTGACGTAGGCCCA 59.337 61.111 0.00 0.00 30.33 5.36
4697 5206 2.125106 CCAGCTTGACGTAGGCCC 60.125 66.667 0.00 0.00 30.33 5.80
4698 5207 2.125106 CCCAGCTTGACGTAGGCC 60.125 66.667 0.00 0.00 30.33 5.19
4699 5208 0.321298 TTTCCCAGCTTGACGTAGGC 60.321 55.000 0.00 0.00 0.00 3.93
4700 5209 1.439679 GTTTCCCAGCTTGACGTAGG 58.560 55.000 0.00 0.00 0.00 3.18
4701 5210 1.002087 AGGTTTCCCAGCTTGACGTAG 59.998 52.381 0.00 0.00 0.00 3.51
4702 5211 1.053424 AGGTTTCCCAGCTTGACGTA 58.947 50.000 0.00 0.00 0.00 3.57
4703 5212 0.182775 AAGGTTTCCCAGCTTGACGT 59.817 50.000 0.00 0.00 41.89 4.34
4704 5213 1.001378 CAAAGGTTTCCCAGCTTGACG 60.001 52.381 0.00 0.00 42.70 4.35
4705 5214 1.269778 GCAAAGGTTTCCCAGCTTGAC 60.270 52.381 0.00 0.00 42.70 3.18
4706 5215 1.039856 GCAAAGGTTTCCCAGCTTGA 58.960 50.000 0.00 0.00 42.70 3.02
4712 5221 1.497286 AGGTGTAGCAAAGGTTTCCCA 59.503 47.619 0.00 0.00 0.00 4.37
4713 5222 2.287977 AGGTGTAGCAAAGGTTTCCC 57.712 50.000 0.00 0.00 0.00 3.97
4715 5224 4.638304 TCTGTAGGTGTAGCAAAGGTTTC 58.362 43.478 0.00 0.00 0.00 2.78
4716 5225 4.699925 TCTGTAGGTGTAGCAAAGGTTT 57.300 40.909 0.00 0.00 0.00 3.27
4717 5226 4.910458 ATCTGTAGGTGTAGCAAAGGTT 57.090 40.909 0.00 0.00 0.00 3.50
4718 5227 4.910458 AATCTGTAGGTGTAGCAAAGGT 57.090 40.909 0.00 0.00 0.00 3.50
4720 5229 8.467598 TCTAACTAATCTGTAGGTGTAGCAAAG 58.532 37.037 0.00 0.00 0.00 2.77
4722 5231 7.949690 TCTAACTAATCTGTAGGTGTAGCAA 57.050 36.000 0.00 0.00 0.00 3.91
4724 5233 7.868415 CCATTCTAACTAATCTGTAGGTGTAGC 59.132 40.741 0.00 0.00 0.00 3.58
4725 5234 8.361139 CCCATTCTAACTAATCTGTAGGTGTAG 58.639 40.741 0.00 0.00 0.00 2.74
4726 5235 7.289317 CCCCATTCTAACTAATCTGTAGGTGTA 59.711 40.741 0.00 0.00 0.00 2.90
4730 5239 6.555360 AGTCCCCATTCTAACTAATCTGTAGG 59.445 42.308 0.00 0.00 0.00 3.18
4731 5240 7.437748 CAGTCCCCATTCTAACTAATCTGTAG 58.562 42.308 0.00 0.00 0.00 2.74
4732 5241 6.326583 CCAGTCCCCATTCTAACTAATCTGTA 59.673 42.308 0.00 0.00 0.00 2.74
4733 5242 5.131142 CCAGTCCCCATTCTAACTAATCTGT 59.869 44.000 0.00 0.00 0.00 3.41
4734 5243 5.455326 CCCAGTCCCCATTCTAACTAATCTG 60.455 48.000 0.00 0.00 0.00 2.90
4735 5244 4.660771 CCCAGTCCCCATTCTAACTAATCT 59.339 45.833 0.00 0.00 0.00 2.40
4736 5245 4.747009 GCCCAGTCCCCATTCTAACTAATC 60.747 50.000 0.00 0.00 0.00 1.75
4965 7920 9.330063 CTTTTGGAAGTGATTATATAGCTGTGA 57.670 33.333 0.00 0.00 0.00 3.58
5149 9697 4.113354 CACCCTATAGCTTCACTTTCGTC 58.887 47.826 0.00 0.00 0.00 4.20
5152 9700 4.113354 CGACACCCTATAGCTTCACTTTC 58.887 47.826 0.00 0.00 0.00 2.62
5451 11078 0.249280 CCAAACTTTTCCCACACGGC 60.249 55.000 0.00 0.00 0.00 5.68
5509 11136 2.490991 GGAGTGCTTTAAGTTCCGTGT 58.509 47.619 0.00 0.00 0.00 4.49
5550 11177 1.005450 GTATTGGGACCCACCACATGT 59.995 52.381 14.59 0.00 41.03 3.21


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.