Multiple sequence alignment - TraesCS3B01G028800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G028800 chr3B 100.000 3103 0 0 1 3103 12402270 12399168 0.000000e+00 5731
1 TraesCS3B01G028800 chr3B 92.424 2376 106 30 3 2362 28083481 28081164 0.000000e+00 3323
2 TraesCS3B01G028800 chr3B 82.086 1189 153 35 971 2113 12181780 12180606 0.000000e+00 961
3 TraesCS3B01G028800 chr3B 83.067 750 112 11 1366 2113 27994428 27995164 0.000000e+00 667
4 TraesCS3B01G028800 chr3B 76.726 1173 208 43 968 2120 14112563 14111436 7.410000e-166 593
5 TraesCS3B01G028800 chrUn 91.221 2335 153 26 3 2313 35453380 35451074 0.000000e+00 3129
6 TraesCS3B01G028800 chr3D 89.315 2162 144 49 3 2124 5608118 5610232 0.000000e+00 2632
7 TraesCS3B01G028800 chr3D 88.558 437 50 0 2667 3103 566145230 566144794 5.890000e-147 531
8 TraesCS3B01G028800 chr3D 87.432 183 16 2 2186 2362 5610255 5610436 1.460000e-48 204
9 TraesCS3B01G028800 chr3D 83.256 215 20 7 2438 2637 5610622 5610835 1.900000e-42 183
10 TraesCS3B01G028800 chr3A 86.002 1886 166 50 791 2642 15781036 15779215 0.000000e+00 1930
11 TraesCS3B01G028800 chr3A 87.718 1433 130 25 779 2196 17258740 17257339 0.000000e+00 1629
12 TraesCS3B01G028800 chr3A 86.219 1132 143 10 905 2033 11629290 11628169 0.000000e+00 1214
13 TraesCS3B01G028800 chr3A 84.111 1158 136 28 962 2104 15695341 15694217 0.000000e+00 1075
14 TraesCS3B01G028800 chr3A 80.359 1171 164 43 970 2120 15603638 15604762 0.000000e+00 828
15 TraesCS3B01G028800 chr3A 87.764 237 19 3 2188 2418 15778293 15778061 5.100000e-68 268
16 TraesCS3B01G028800 chr4B 95.881 437 18 0 2667 3103 139622249 139622685 0.000000e+00 708
17 TraesCS3B01G028800 chr2A 77.568 954 171 33 1192 2120 19663143 19662208 1.270000e-148 536
18 TraesCS3B01G028800 chr4D 88.558 437 47 1 2667 3103 47588907 47589340 7.620000e-146 527


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G028800 chr3B 12399168 12402270 3102 True 5731.000000 5731 100.000000 1 3103 1 chr3B.!!$R2 3102
1 TraesCS3B01G028800 chr3B 28081164 28083481 2317 True 3323.000000 3323 92.424000 3 2362 1 chr3B.!!$R4 2359
2 TraesCS3B01G028800 chr3B 12180606 12181780 1174 True 961.000000 961 82.086000 971 2113 1 chr3B.!!$R1 1142
3 TraesCS3B01G028800 chr3B 27994428 27995164 736 False 667.000000 667 83.067000 1366 2113 1 chr3B.!!$F1 747
4 TraesCS3B01G028800 chr3B 14111436 14112563 1127 True 593.000000 593 76.726000 968 2120 1 chr3B.!!$R3 1152
5 TraesCS3B01G028800 chrUn 35451074 35453380 2306 True 3129.000000 3129 91.221000 3 2313 1 chrUn.!!$R1 2310
6 TraesCS3B01G028800 chr3D 5608118 5610835 2717 False 1006.333333 2632 86.667667 3 2637 3 chr3D.!!$F1 2634
7 TraesCS3B01G028800 chr3A 17257339 17258740 1401 True 1629.000000 1629 87.718000 779 2196 1 chr3A.!!$R3 1417
8 TraesCS3B01G028800 chr3A 11628169 11629290 1121 True 1214.000000 1214 86.219000 905 2033 1 chr3A.!!$R1 1128
9 TraesCS3B01G028800 chr3A 15778061 15781036 2975 True 1099.000000 1930 86.883000 791 2642 2 chr3A.!!$R4 1851
10 TraesCS3B01G028800 chr3A 15694217 15695341 1124 True 1075.000000 1075 84.111000 962 2104 1 chr3A.!!$R2 1142
11 TraesCS3B01G028800 chr3A 15603638 15604762 1124 False 828.000000 828 80.359000 970 2120 1 chr3A.!!$F1 1150
12 TraesCS3B01G028800 chr2A 19662208 19663143 935 True 536.000000 536 77.568000 1192 2120 1 chr2A.!!$R1 928

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
808 833 0.396835 ACTCGGTAACTCTAGGGGGC 60.397 60.0 0.0 0.0 0.0 5.8 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2695 4502 0.111704 CACGAACACGTTCAAGCGAG 60.112 55.0 10.35 0.0 39.46 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 6.435430 TGCATGTTACAACCTAGCATAAAG 57.565 37.500 0.00 0.00 0.00 1.85
231 238 9.847224 ATCACAAGTACTATTAACAAATAGGGG 57.153 33.333 0.00 0.00 37.13 4.79
384 393 5.068855 TGTTGAATTTCCTGACATTTGAGCA 59.931 36.000 0.00 0.00 0.00 4.26
472 481 3.919973 TTAACCAGACCGCCGCGTC 62.920 63.158 12.58 9.39 0.00 5.19
526 535 3.175724 TCGAAGTCGAGCGAGGAC 58.824 61.111 0.00 0.00 44.22 3.85
537 546 1.141053 GAGCGAGGACCCCAAATGTAT 59.859 52.381 0.00 0.00 0.00 2.29
541 550 1.766496 GAGGACCCCAAATGTATCCGA 59.234 52.381 0.00 0.00 34.46 4.55
552 561 6.294508 CCCAAATGTATCCGACTTTCAAAGTT 60.295 38.462 3.76 0.00 43.03 2.66
808 833 0.396835 ACTCGGTAACTCTAGGGGGC 60.397 60.000 0.00 0.00 0.00 5.80
2115 2342 4.034510 GGTCCGACTGATTGATTGATTGAC 59.965 45.833 0.00 0.00 0.00 3.18
2120 2347 4.836825 ACTGATTGATTGATTGACGTCCT 58.163 39.130 14.12 0.00 0.00 3.85
2181 2444 8.948631 TGAAACTATCTGGAGATGTTTGATAC 57.051 34.615 15.71 7.42 36.68 2.24
2184 2447 7.667575 ACTATCTGGAGATGTTTGATACTGT 57.332 36.000 0.00 0.00 36.05 3.55
2230 3863 2.678336 GCATGCTACTGGTCCTGTTAAC 59.322 50.000 11.37 0.00 0.00 2.01
2342 3989 3.304928 CCCTTGGAAATTCGCATGCTATC 60.305 47.826 17.13 6.34 0.00 2.08
2362 4150 6.470235 GCTATCGAACACATCATTTTCCTTTG 59.530 38.462 0.00 0.00 0.00 2.77
2388 4180 5.456763 GGGGCATCATATTTCTCTACCAACT 60.457 44.000 0.00 0.00 0.00 3.16
2393 4185 5.428253 TCATATTTCTCTACCAACTGCACC 58.572 41.667 0.00 0.00 0.00 5.01
2398 4190 2.171659 TCTCTACCAACTGCACCAACAA 59.828 45.455 0.00 0.00 0.00 2.83
2418 4210 4.523943 ACAATGCTCCATGAACTGCTTAAA 59.476 37.500 0.00 0.00 0.00 1.52
2419 4211 4.708726 ATGCTCCATGAACTGCTTAAAC 57.291 40.909 0.00 0.00 0.00 2.01
2420 4212 3.754965 TGCTCCATGAACTGCTTAAACT 58.245 40.909 0.00 0.00 0.00 2.66
2421 4213 3.503363 TGCTCCATGAACTGCTTAAACTG 59.497 43.478 0.00 0.00 0.00 3.16
2422 4214 3.753272 GCTCCATGAACTGCTTAAACTGA 59.247 43.478 0.00 0.00 0.00 3.41
2423 4215 4.397417 GCTCCATGAACTGCTTAAACTGAT 59.603 41.667 0.00 0.00 0.00 2.90
2424 4216 5.675575 GCTCCATGAACTGCTTAAACTGATG 60.676 44.000 0.00 0.00 0.00 3.07
2425 4217 5.316167 TCCATGAACTGCTTAAACTGATGT 58.684 37.500 0.00 0.00 0.00 3.06
2426 4218 5.769662 TCCATGAACTGCTTAAACTGATGTT 59.230 36.000 0.00 0.00 38.16 2.71
2427 4219 6.939730 TCCATGAACTGCTTAAACTGATGTTA 59.060 34.615 0.00 0.00 34.96 2.41
2428 4220 7.119699 TCCATGAACTGCTTAAACTGATGTTAG 59.880 37.037 0.00 0.00 34.96 2.34
2429 4221 7.119699 CCATGAACTGCTTAAACTGATGTTAGA 59.880 37.037 0.00 0.00 34.96 2.10
2430 4222 7.421530 TGAACTGCTTAAACTGATGTTAGAC 57.578 36.000 0.00 0.00 34.96 2.59
2431 4223 6.989759 TGAACTGCTTAAACTGATGTTAGACA 59.010 34.615 0.00 0.00 34.96 3.41
2432 4224 7.661437 TGAACTGCTTAAACTGATGTTAGACAT 59.339 33.333 0.00 0.00 42.43 3.06
2433 4225 7.369803 ACTGCTTAAACTGATGTTAGACATG 57.630 36.000 0.00 0.00 39.27 3.21
2434 4226 7.161404 ACTGCTTAAACTGATGTTAGACATGA 58.839 34.615 0.00 0.00 39.27 3.07
2435 4227 7.332926 ACTGCTTAAACTGATGTTAGACATGAG 59.667 37.037 0.00 6.07 43.93 2.90
2436 4228 6.092670 TGCTTAAACTGATGTTAGACATGAGC 59.907 38.462 0.00 0.00 42.44 4.26
2437 4229 6.092670 GCTTAAACTGATGTTAGACATGAGCA 59.907 38.462 0.00 0.00 42.44 4.26
2438 4230 5.869753 AAACTGATGTTAGACATGAGCAC 57.130 39.130 0.00 0.00 42.44 4.40
2439 4231 4.541973 ACTGATGTTAGACATGAGCACA 57.458 40.909 0.00 0.00 42.44 4.57
2440 4232 4.502016 ACTGATGTTAGACATGAGCACAG 58.498 43.478 0.00 6.37 42.44 3.66
2441 4233 3.264947 TGATGTTAGACATGAGCACAGC 58.735 45.455 0.00 0.02 39.27 4.40
2442 4234 3.055602 TGATGTTAGACATGAGCACAGCT 60.056 43.478 0.00 0.00 39.27 4.24
2493 4285 7.497595 TGTGTGTGTCTTTCTACAGTTAGAAT 58.502 34.615 0.00 0.00 42.71 2.40
2510 4302 7.280876 CAGTTAGAATACCACACACATGCTATT 59.719 37.037 0.00 0.00 0.00 1.73
2515 4307 4.707030 ACCACACACATGCTATTTGATG 57.293 40.909 0.00 0.00 0.00 3.07
2574 4373 7.981102 AAAACTATGTTCAAGTAGGAACCTC 57.019 36.000 0.00 0.00 45.12 3.85
2580 4379 2.889512 TCAAGTAGGAACCTCTGCTCA 58.110 47.619 0.00 0.00 0.00 4.26
2582 4381 3.840666 TCAAGTAGGAACCTCTGCTCAAT 59.159 43.478 0.00 0.00 0.00 2.57
2591 4390 5.419542 GAACCTCTGCTCAATGTACACATA 58.580 41.667 0.00 0.00 35.10 2.29
2592 4391 5.420725 ACCTCTGCTCAATGTACACATAA 57.579 39.130 0.00 0.00 35.10 1.90
2596 4395 7.394359 ACCTCTGCTCAATGTACACATAATTTT 59.606 33.333 0.00 0.00 35.10 1.82
2598 4397 9.282247 CTCTGCTCAATGTACACATAATTTTTC 57.718 33.333 0.00 0.00 35.10 2.29
2600 4399 7.890515 TGCTCAATGTACACATAATTTTTCCA 58.109 30.769 0.00 0.00 35.10 3.53
2618 4425 3.994317 TCCATCTTGTATGACCTCTCCA 58.006 45.455 0.00 0.00 0.00 3.86
2650 4457 9.646522 AAATTATTACATTGCCTATCAGGAAGT 57.353 29.630 0.00 0.00 37.67 3.01
2651 4458 8.627208 ATTATTACATTGCCTATCAGGAAGTG 57.373 34.615 0.00 0.00 36.73 3.16
2652 4459 5.692115 TTACATTGCCTATCAGGAAGTGA 57.308 39.130 2.86 0.00 32.59 3.41
2653 4460 4.574674 ACATTGCCTATCAGGAAGTGAA 57.425 40.909 2.86 0.00 32.59 3.18
2654 4461 4.521146 ACATTGCCTATCAGGAAGTGAAG 58.479 43.478 2.86 0.00 32.59 3.02
2655 4462 4.018960 ACATTGCCTATCAGGAAGTGAAGT 60.019 41.667 2.86 0.00 32.59 3.01
2656 4463 3.616956 TGCCTATCAGGAAGTGAAGTG 57.383 47.619 0.00 0.00 39.19 3.16
2657 4464 3.173151 TGCCTATCAGGAAGTGAAGTGA 58.827 45.455 0.00 0.00 39.19 3.41
2658 4465 3.196469 TGCCTATCAGGAAGTGAAGTGAG 59.804 47.826 0.00 0.00 39.19 3.51
2659 4466 3.431486 GCCTATCAGGAAGTGAAGTGAGG 60.431 52.174 0.00 0.00 39.19 3.86
2660 4467 3.772025 CCTATCAGGAAGTGAAGTGAGGT 59.228 47.826 0.00 0.00 39.19 3.85
2661 4468 4.956700 CCTATCAGGAAGTGAAGTGAGGTA 59.043 45.833 0.00 0.00 39.19 3.08
2662 4469 5.600484 CCTATCAGGAAGTGAAGTGAGGTAT 59.400 44.000 0.00 0.00 39.19 2.73
2663 4470 6.098982 CCTATCAGGAAGTGAAGTGAGGTATT 59.901 42.308 0.00 0.00 39.19 1.89
2664 4471 5.825593 TCAGGAAGTGAAGTGAGGTATTT 57.174 39.130 0.00 0.00 29.64 1.40
2665 4472 6.187727 TCAGGAAGTGAAGTGAGGTATTTT 57.812 37.500 0.00 0.00 29.64 1.82
2666 4473 6.601332 TCAGGAAGTGAAGTGAGGTATTTTT 58.399 36.000 0.00 0.00 29.64 1.94
2687 4494 3.419793 TTGAAGGACAAGTGCCTGG 57.580 52.632 0.00 0.00 35.50 4.45
2688 4495 0.823356 TTGAAGGACAAGTGCCTGGC 60.823 55.000 12.87 12.87 35.50 4.85
2689 4496 1.973812 GAAGGACAAGTGCCTGGCC 60.974 63.158 17.53 7.66 45.99 5.36
2691 4498 2.116125 GGACAAGTGCCTGGCCTT 59.884 61.111 17.53 15.58 41.84 4.35
2692 4499 1.531602 GGACAAGTGCCTGGCCTTT 60.532 57.895 17.53 7.60 41.84 3.11
2693 4500 1.662044 GACAAGTGCCTGGCCTTTG 59.338 57.895 22.86 22.86 0.00 2.77
2694 4501 2.341176 CAAGTGCCTGGCCTTTGC 59.659 61.111 17.53 4.33 0.00 3.68
2704 4511 3.354678 GCCTTTGCCTCGCTTGAA 58.645 55.556 0.00 0.00 0.00 2.69
2705 4512 1.081175 GCCTTTGCCTCGCTTGAAC 60.081 57.895 0.00 0.00 0.00 3.18
2706 4513 1.207593 CCTTTGCCTCGCTTGAACG 59.792 57.895 0.00 0.00 0.00 3.95
2707 4514 1.507141 CCTTTGCCTCGCTTGAACGT 61.507 55.000 0.00 0.00 0.00 3.99
2708 4515 0.384725 CTTTGCCTCGCTTGAACGTG 60.385 55.000 0.00 0.00 0.00 4.49
2709 4516 1.092921 TTTGCCTCGCTTGAACGTGT 61.093 50.000 0.00 0.00 0.00 4.49
2710 4517 1.092921 TTGCCTCGCTTGAACGTGTT 61.093 50.000 0.00 0.00 0.00 3.32
2711 4518 1.204312 GCCTCGCTTGAACGTGTTC 59.796 57.895 5.80 5.80 39.91 3.18
2712 4519 1.487231 CCTCGCTTGAACGTGTTCG 59.513 57.895 8.11 0.00 42.28 3.95
2723 4530 3.963570 CGTGTTCGTGTACGTCAAC 57.036 52.632 4.20 3.54 40.80 3.18
2724 4531 0.155218 CGTGTTCGTGTACGTCAACG 59.845 55.000 14.79 14.79 46.33 4.10
2725 4532 1.465837 GTGTTCGTGTACGTCAACGA 58.534 50.000 18.42 18.42 43.02 3.85
2726 4533 1.445731 GTGTTCGTGTACGTCAACGAG 59.554 52.381 20.48 2.17 43.02 4.18
2727 4534 0.428618 GTTCGTGTACGTCAACGAGC 59.571 55.000 20.48 19.64 43.02 5.03
2728 4535 0.993251 TTCGTGTACGTCAACGAGCG 60.993 55.000 20.48 8.86 43.02 5.03
2729 4536 1.439201 CGTGTACGTCAACGAGCGA 60.439 57.895 15.63 0.00 43.02 4.93
2730 4537 0.993251 CGTGTACGTCAACGAGCGAA 60.993 55.000 15.63 0.00 43.02 4.70
2731 4538 0.701303 GTGTACGTCAACGAGCGAAG 59.299 55.000 9.88 0.00 43.02 3.79
2732 4539 0.386352 TGTACGTCAACGAGCGAAGG 60.386 55.000 9.88 0.00 43.02 3.46
2733 4540 0.386478 GTACGTCAACGAGCGAAGGT 60.386 55.000 9.88 0.00 43.02 3.50
2734 4541 0.386352 TACGTCAACGAGCGAAGGTG 60.386 55.000 9.88 0.00 43.02 4.00
2735 4542 2.853914 GTCAACGAGCGAAGGTGC 59.146 61.111 0.00 0.00 39.88 5.01
2736 4543 2.733218 TCAACGAGCGAAGGTGCG 60.733 61.111 0.00 0.00 39.88 5.34
2737 4544 3.777925 CAACGAGCGAAGGTGCGG 61.778 66.667 0.00 0.00 39.88 5.69
2740 4547 4.514577 CGAGCGAAGGTGCGGGAT 62.515 66.667 0.00 0.00 39.88 3.85
2741 4548 2.586357 GAGCGAAGGTGCGGGATC 60.586 66.667 0.00 0.00 39.88 3.36
2742 4549 3.077556 AGCGAAGGTGCGGGATCT 61.078 61.111 0.00 0.00 40.67 2.75
2743 4550 2.586357 GCGAAGGTGCGGGATCTC 60.586 66.667 0.00 0.00 0.00 2.75
2744 4551 2.892640 CGAAGGTGCGGGATCTCA 59.107 61.111 0.00 0.00 0.00 3.27
2745 4552 1.218047 CGAAGGTGCGGGATCTCAA 59.782 57.895 0.00 0.00 0.00 3.02
2746 4553 0.807667 CGAAGGTGCGGGATCTCAAG 60.808 60.000 0.00 0.00 0.00 3.02
2747 4554 0.462759 GAAGGTGCGGGATCTCAAGG 60.463 60.000 0.00 0.00 0.00 3.61
2748 4555 0.909610 AAGGTGCGGGATCTCAAGGA 60.910 55.000 0.00 0.00 0.00 3.36
2749 4556 0.909610 AGGTGCGGGATCTCAAGGAA 60.910 55.000 0.00 0.00 0.00 3.36
2750 4557 0.462759 GGTGCGGGATCTCAAGGAAG 60.463 60.000 0.00 0.00 0.00 3.46
2751 4558 0.462759 GTGCGGGATCTCAAGGAAGG 60.463 60.000 0.00 0.00 0.00 3.46
2752 4559 0.909610 TGCGGGATCTCAAGGAAGGT 60.910 55.000 0.00 0.00 0.00 3.50
2753 4560 0.462759 GCGGGATCTCAAGGAAGGTG 60.463 60.000 0.00 0.00 0.00 4.00
2754 4561 1.195115 CGGGATCTCAAGGAAGGTGA 58.805 55.000 0.00 0.00 0.00 4.02
2755 4562 1.765314 CGGGATCTCAAGGAAGGTGAT 59.235 52.381 0.00 0.00 0.00 3.06
2756 4563 2.484417 CGGGATCTCAAGGAAGGTGATG 60.484 54.545 0.00 0.00 0.00 3.07
2757 4564 2.570135 GGATCTCAAGGAAGGTGATGC 58.430 52.381 0.00 0.00 0.00 3.91
2758 4565 2.172293 GGATCTCAAGGAAGGTGATGCT 59.828 50.000 0.00 0.00 0.00 3.79
2759 4566 2.775911 TCTCAAGGAAGGTGATGCTG 57.224 50.000 0.00 0.00 0.00 4.41
2760 4567 2.259917 TCTCAAGGAAGGTGATGCTGA 58.740 47.619 0.00 0.00 0.00 4.26
2761 4568 2.027745 TCTCAAGGAAGGTGATGCTGAC 60.028 50.000 0.00 0.00 0.00 3.51
2762 4569 1.699083 TCAAGGAAGGTGATGCTGACA 59.301 47.619 0.00 0.00 0.00 3.58
2763 4570 1.808945 CAAGGAAGGTGATGCTGACAC 59.191 52.381 0.00 0.00 37.51 3.67
2773 4580 4.974591 GTGATGCTGACACCAAATACTTC 58.025 43.478 0.00 0.00 32.84 3.01
2774 4581 4.009675 TGATGCTGACACCAAATACTTCC 58.990 43.478 0.00 0.00 0.00 3.46
2775 4582 3.500448 TGCTGACACCAAATACTTCCA 57.500 42.857 0.00 0.00 0.00 3.53
2776 4583 3.146066 TGCTGACACCAAATACTTCCAC 58.854 45.455 0.00 0.00 0.00 4.02
2777 4584 3.146066 GCTGACACCAAATACTTCCACA 58.854 45.455 0.00 0.00 0.00 4.17
2778 4585 3.758554 GCTGACACCAAATACTTCCACAT 59.241 43.478 0.00 0.00 0.00 3.21
2779 4586 4.379813 GCTGACACCAAATACTTCCACATG 60.380 45.833 0.00 0.00 0.00 3.21
2780 4587 4.979335 TGACACCAAATACTTCCACATGA 58.021 39.130 0.00 0.00 0.00 3.07
2781 4588 5.380900 TGACACCAAATACTTCCACATGAA 58.619 37.500 0.00 0.00 0.00 2.57
2782 4589 5.830457 TGACACCAAATACTTCCACATGAAA 59.170 36.000 0.00 0.00 31.06 2.69
2783 4590 6.016360 TGACACCAAATACTTCCACATGAAAG 60.016 38.462 0.00 2.71 31.06 2.62
2784 4591 5.163513 CACCAAATACTTCCACATGAAAGC 58.836 41.667 0.00 0.00 31.06 3.51
2785 4592 4.082787 ACCAAATACTTCCACATGAAAGCG 60.083 41.667 0.00 0.00 31.06 4.68
2786 4593 4.155826 CCAAATACTTCCACATGAAAGCGA 59.844 41.667 0.00 0.00 31.06 4.93
2787 4594 5.335583 CCAAATACTTCCACATGAAAGCGAA 60.336 40.000 0.00 0.00 31.06 4.70
2788 4595 4.946784 ATACTTCCACATGAAAGCGAAC 57.053 40.909 0.00 0.00 31.06 3.95
2789 4596 1.531149 ACTTCCACATGAAAGCGAACG 59.469 47.619 0.00 0.00 31.06 3.95
2790 4597 0.871722 TTCCACATGAAAGCGAACGG 59.128 50.000 0.00 0.00 0.00 4.44
2791 4598 0.953471 TCCACATGAAAGCGAACGGG 60.953 55.000 0.00 0.00 0.00 5.28
2792 4599 1.154225 CACATGAAAGCGAACGGGC 60.154 57.895 0.00 0.00 0.00 6.13
2793 4600 2.098298 CATGAAAGCGAACGGGCG 59.902 61.111 0.00 0.00 38.18 6.13
2806 4613 2.816520 GGGCGCCGTCGTAAACAT 60.817 61.111 22.54 0.00 38.14 2.71
2807 4614 2.392974 GGGCGCCGTCGTAAACATT 61.393 57.895 22.54 0.00 38.14 2.71
2808 4615 1.498611 GGCGCCGTCGTAAACATTT 59.501 52.632 12.58 0.00 38.14 2.32
2809 4616 0.720590 GGCGCCGTCGTAAACATTTA 59.279 50.000 12.58 0.00 38.14 1.40
2810 4617 1.128321 GGCGCCGTCGTAAACATTTAA 59.872 47.619 12.58 0.00 38.14 1.52
2811 4618 2.223089 GGCGCCGTCGTAAACATTTAAT 60.223 45.455 12.58 0.00 38.14 1.40
2812 4619 3.001127 GGCGCCGTCGTAAACATTTAATA 59.999 43.478 12.58 0.00 38.14 0.98
2813 4620 3.955691 GCGCCGTCGTAAACATTTAATAC 59.044 43.478 0.00 0.00 38.14 1.89
2814 4621 4.508052 CGCCGTCGTAAACATTTAATACC 58.492 43.478 0.00 0.00 0.00 2.73
2815 4622 4.550639 CGCCGTCGTAAACATTTAATACCC 60.551 45.833 0.00 0.00 0.00 3.69
2816 4623 4.571984 GCCGTCGTAAACATTTAATACCCT 59.428 41.667 0.00 0.00 0.00 4.34
2817 4624 5.752955 GCCGTCGTAAACATTTAATACCCTA 59.247 40.000 0.00 0.00 0.00 3.53
2818 4625 6.292328 GCCGTCGTAAACATTTAATACCCTAC 60.292 42.308 0.00 0.00 0.00 3.18
2819 4626 6.200854 CCGTCGTAAACATTTAATACCCTACC 59.799 42.308 0.00 0.00 0.00 3.18
2820 4627 6.980397 CGTCGTAAACATTTAATACCCTACCT 59.020 38.462 0.00 0.00 0.00 3.08
2821 4628 7.168135 CGTCGTAAACATTTAATACCCTACCTC 59.832 40.741 0.00 0.00 0.00 3.85
2822 4629 7.981225 GTCGTAAACATTTAATACCCTACCTCA 59.019 37.037 0.00 0.00 0.00 3.86
2823 4630 8.538701 TCGTAAACATTTAATACCCTACCTCAA 58.461 33.333 0.00 0.00 0.00 3.02
2824 4631 9.165035 CGTAAACATTTAATACCCTACCTCAAA 57.835 33.333 0.00 0.00 0.00 2.69
2826 4633 8.943594 AAACATTTAATACCCTACCTCAAACA 57.056 30.769 0.00 0.00 0.00 2.83
2827 4634 8.575649 AACATTTAATACCCTACCTCAAACAG 57.424 34.615 0.00 0.00 0.00 3.16
2846 4653 2.480555 GCGACCGAATTGCCACAG 59.519 61.111 0.00 0.00 0.00 3.66
2847 4654 2.325082 GCGACCGAATTGCCACAGT 61.325 57.895 0.00 0.00 0.00 3.55
2848 4655 1.852067 GCGACCGAATTGCCACAGTT 61.852 55.000 0.00 0.00 0.00 3.16
2849 4656 1.434555 CGACCGAATTGCCACAGTTA 58.565 50.000 0.00 0.00 0.00 2.24
2850 4657 2.006888 CGACCGAATTGCCACAGTTAT 58.993 47.619 0.00 0.00 0.00 1.89
2851 4658 2.223021 CGACCGAATTGCCACAGTTATG 60.223 50.000 0.00 0.00 0.00 1.90
2852 4659 2.091541 ACCGAATTGCCACAGTTATGG 58.908 47.619 0.00 0.00 43.26 2.74
2853 4660 2.290641 ACCGAATTGCCACAGTTATGGA 60.291 45.455 0.00 0.00 43.02 3.41
2854 4661 2.752354 CCGAATTGCCACAGTTATGGAA 59.248 45.455 0.00 0.00 43.02 3.53
2855 4662 3.181497 CCGAATTGCCACAGTTATGGAAG 60.181 47.826 0.00 0.00 43.02 3.46
2856 4663 3.689161 CGAATTGCCACAGTTATGGAAGA 59.311 43.478 0.00 0.00 43.02 2.87
2857 4664 4.201851 CGAATTGCCACAGTTATGGAAGAG 60.202 45.833 0.00 0.00 43.02 2.85
2858 4665 4.574674 ATTGCCACAGTTATGGAAGAGA 57.425 40.909 0.00 0.00 43.02 3.10
2859 4666 4.365514 TTGCCACAGTTATGGAAGAGAA 57.634 40.909 0.00 0.00 43.02 2.87
2860 4667 4.365514 TGCCACAGTTATGGAAGAGAAA 57.634 40.909 0.00 0.00 43.02 2.52
2861 4668 4.072131 TGCCACAGTTATGGAAGAGAAAC 58.928 43.478 0.00 0.00 43.02 2.78
2862 4669 4.202461 TGCCACAGTTATGGAAGAGAAACT 60.202 41.667 0.00 0.00 43.02 2.66
2863 4670 5.012664 TGCCACAGTTATGGAAGAGAAACTA 59.987 40.000 0.00 0.00 43.02 2.24
2864 4671 5.938125 GCCACAGTTATGGAAGAGAAACTAA 59.062 40.000 0.00 0.00 43.02 2.24
2865 4672 6.430000 GCCACAGTTATGGAAGAGAAACTAAA 59.570 38.462 0.00 0.00 43.02 1.85
2866 4673 7.573283 GCCACAGTTATGGAAGAGAAACTAAAC 60.573 40.741 0.00 0.00 43.02 2.01
2867 4674 7.661847 CCACAGTTATGGAAGAGAAACTAAACT 59.338 37.037 0.00 0.00 43.02 2.66
2868 4675 9.057089 CACAGTTATGGAAGAGAAACTAAACTT 57.943 33.333 0.00 0.00 31.20 2.66
2869 4676 9.057089 ACAGTTATGGAAGAGAAACTAAACTTG 57.943 33.333 0.00 0.00 31.20 3.16
2870 4677 8.507249 CAGTTATGGAAGAGAAACTAAACTTGG 58.493 37.037 0.00 0.00 31.20 3.61
2871 4678 5.966742 ATGGAAGAGAAACTAAACTTGGC 57.033 39.130 0.00 0.00 0.00 4.52
2872 4679 3.813166 TGGAAGAGAAACTAAACTTGGCG 59.187 43.478 0.00 0.00 0.00 5.69
2873 4680 3.188667 GGAAGAGAAACTAAACTTGGCGG 59.811 47.826 0.00 0.00 0.00 6.13
2874 4681 2.779506 AGAGAAACTAAACTTGGCGGG 58.220 47.619 0.00 0.00 0.00 6.13
2875 4682 2.370849 AGAGAAACTAAACTTGGCGGGA 59.629 45.455 0.00 0.00 0.00 5.14
2876 4683 2.742589 GAGAAACTAAACTTGGCGGGAG 59.257 50.000 0.00 0.00 0.00 4.30
2877 4684 2.370849 AGAAACTAAACTTGGCGGGAGA 59.629 45.455 0.00 0.00 0.00 3.71
2878 4685 2.943036 AACTAAACTTGGCGGGAGAA 57.057 45.000 0.00 0.00 0.00 2.87
2879 4686 3.434940 AACTAAACTTGGCGGGAGAAT 57.565 42.857 0.00 0.00 0.00 2.40
2880 4687 3.434940 ACTAAACTTGGCGGGAGAATT 57.565 42.857 0.00 0.00 0.00 2.17
2881 4688 3.344515 ACTAAACTTGGCGGGAGAATTC 58.655 45.455 0.00 0.00 0.00 2.17
2882 4689 2.586648 AAACTTGGCGGGAGAATTCT 57.413 45.000 7.95 7.95 0.00 2.40
2883 4690 2.586648 AACTTGGCGGGAGAATTCTT 57.413 45.000 9.87 0.00 0.00 2.52
2884 4691 2.115343 ACTTGGCGGGAGAATTCTTC 57.885 50.000 9.87 7.41 0.00 2.87
2885 4692 1.351017 ACTTGGCGGGAGAATTCTTCA 59.649 47.619 15.79 4.58 0.00 3.02
2886 4693 2.012673 CTTGGCGGGAGAATTCTTCAG 58.987 52.381 15.79 12.54 0.00 3.02
2887 4694 0.392998 TGGCGGGAGAATTCTTCAGC 60.393 55.000 25.71 25.71 41.18 4.26
2888 4695 0.392998 GGCGGGAGAATTCTTCAGCA 60.393 55.000 31.65 0.00 43.27 4.41
2889 4696 1.453155 GCGGGAGAATTCTTCAGCAA 58.547 50.000 27.85 0.00 41.48 3.91
2890 4697 1.399791 GCGGGAGAATTCTTCAGCAAG 59.600 52.381 27.85 10.03 41.48 4.01
2891 4698 1.399791 CGGGAGAATTCTTCAGCAAGC 59.600 52.381 15.79 0.00 0.00 4.01
2892 4699 2.720915 GGGAGAATTCTTCAGCAAGCT 58.279 47.619 15.79 0.00 0.00 3.74
2893 4700 3.679917 CGGGAGAATTCTTCAGCAAGCTA 60.680 47.826 15.79 0.00 0.00 3.32
2894 4701 4.265073 GGGAGAATTCTTCAGCAAGCTAA 58.735 43.478 15.79 0.00 0.00 3.09
2895 4702 4.886489 GGGAGAATTCTTCAGCAAGCTAAT 59.114 41.667 15.79 0.00 0.00 1.73
2896 4703 5.221009 GGGAGAATTCTTCAGCAAGCTAATG 60.221 44.000 15.79 0.00 0.00 1.90
2897 4704 5.221009 GGAGAATTCTTCAGCAAGCTAATGG 60.221 44.000 9.87 0.00 0.00 3.16
2898 4705 4.643784 AGAATTCTTCAGCAAGCTAATGGG 59.356 41.667 0.88 0.00 0.00 4.00
2899 4706 1.755179 TCTTCAGCAAGCTAATGGGC 58.245 50.000 0.00 0.00 0.00 5.36
2900 4707 1.004628 TCTTCAGCAAGCTAATGGGCA 59.995 47.619 0.00 0.00 34.17 5.36
2901 4708 1.133790 CTTCAGCAAGCTAATGGGCAC 59.866 52.381 0.00 0.00 34.17 5.01
2919 4726 3.399181 CCCGGAGCTGGCCAGTAA 61.399 66.667 32.81 0.00 0.00 2.24
2920 4727 2.746375 CCCGGAGCTGGCCAGTAAT 61.746 63.158 32.81 19.68 0.00 1.89
2921 4728 1.407656 CCCGGAGCTGGCCAGTAATA 61.408 60.000 32.81 0.00 0.00 0.98
2922 4729 0.034059 CCGGAGCTGGCCAGTAATAG 59.966 60.000 32.81 19.69 0.00 1.73
2923 4730 0.034059 CGGAGCTGGCCAGTAATAGG 59.966 60.000 32.81 14.36 0.00 2.57
2924 4731 1.424638 GGAGCTGGCCAGTAATAGGA 58.575 55.000 32.81 0.00 0.00 2.94
2925 4732 1.346068 GGAGCTGGCCAGTAATAGGAG 59.654 57.143 32.81 6.54 0.00 3.69
2926 4733 2.043227 GAGCTGGCCAGTAATAGGAGT 58.957 52.381 32.81 7.43 0.00 3.85
2927 4734 2.436173 GAGCTGGCCAGTAATAGGAGTT 59.564 50.000 32.81 2.97 0.00 3.01
2928 4735 2.436173 AGCTGGCCAGTAATAGGAGTTC 59.564 50.000 32.81 12.21 0.00 3.01
2929 4736 2.485657 GCTGGCCAGTAATAGGAGTTCC 60.486 54.545 32.81 8.48 0.00 3.62
2931 4738 3.456277 CTGGCCAGTAATAGGAGTTCCTT 59.544 47.826 25.53 0.00 46.09 3.36
2932 4739 3.199946 TGGCCAGTAATAGGAGTTCCTTG 59.800 47.826 0.00 0.00 46.09 3.61
2933 4740 3.206964 GCCAGTAATAGGAGTTCCTTGC 58.793 50.000 5.91 0.00 46.09 4.01
2934 4741 3.458189 CCAGTAATAGGAGTTCCTTGCG 58.542 50.000 5.91 0.00 46.09 4.85
2935 4742 3.458189 CAGTAATAGGAGTTCCTTGCGG 58.542 50.000 5.91 0.00 46.09 5.69
2936 4743 3.105283 AGTAATAGGAGTTCCTTGCGGT 58.895 45.455 5.91 0.00 46.09 5.68
2937 4744 2.403252 AATAGGAGTTCCTTGCGGTG 57.597 50.000 5.91 0.00 46.09 4.94
2938 4745 0.541863 ATAGGAGTTCCTTGCGGTGG 59.458 55.000 5.91 0.00 46.09 4.61
2939 4746 1.550130 TAGGAGTTCCTTGCGGTGGG 61.550 60.000 5.91 0.00 46.09 4.61
2940 4747 2.747686 GAGTTCCTTGCGGTGGGA 59.252 61.111 0.00 0.00 0.00 4.37
2941 4748 1.376037 GAGTTCCTTGCGGTGGGAG 60.376 63.158 0.00 0.00 32.80 4.30
2942 4749 2.113243 GAGTTCCTTGCGGTGGGAGT 62.113 60.000 0.00 0.00 32.80 3.85
2943 4750 1.671379 GTTCCTTGCGGTGGGAGTC 60.671 63.158 0.00 0.00 32.80 3.36
2944 4751 1.841556 TTCCTTGCGGTGGGAGTCT 60.842 57.895 0.00 0.00 32.80 3.24
2945 4752 1.827399 TTCCTTGCGGTGGGAGTCTC 61.827 60.000 0.00 0.00 32.80 3.36
2946 4753 2.286523 CCTTGCGGTGGGAGTCTCT 61.287 63.158 0.00 0.00 0.00 3.10
2947 4754 1.079543 CTTGCGGTGGGAGTCTCTG 60.080 63.158 0.00 0.00 0.00 3.35
2948 4755 1.533033 TTGCGGTGGGAGTCTCTGA 60.533 57.895 0.00 0.00 0.00 3.27
2949 4756 1.118965 TTGCGGTGGGAGTCTCTGAA 61.119 55.000 0.00 0.00 0.00 3.02
2950 4757 0.904865 TGCGGTGGGAGTCTCTGAAT 60.905 55.000 0.00 0.00 0.00 2.57
2951 4758 0.179097 GCGGTGGGAGTCTCTGAATC 60.179 60.000 0.00 0.00 0.00 2.52
2952 4759 1.479709 CGGTGGGAGTCTCTGAATCT 58.520 55.000 0.00 0.00 0.00 2.40
2953 4760 1.135915 CGGTGGGAGTCTCTGAATCTG 59.864 57.143 0.00 0.00 0.00 2.90
2954 4761 1.134551 GGTGGGAGTCTCTGAATCTGC 60.135 57.143 0.00 0.00 0.00 4.26
2955 4762 1.552337 GTGGGAGTCTCTGAATCTGCA 59.448 52.381 0.00 0.00 0.00 4.41
2956 4763 1.552337 TGGGAGTCTCTGAATCTGCAC 59.448 52.381 0.00 0.00 0.00 4.57
2957 4764 1.552337 GGGAGTCTCTGAATCTGCACA 59.448 52.381 0.00 0.00 0.00 4.57
2958 4765 2.027745 GGGAGTCTCTGAATCTGCACAA 60.028 50.000 0.00 0.00 0.00 3.33
2959 4766 2.999355 GGAGTCTCTGAATCTGCACAAC 59.001 50.000 0.00 0.00 0.00 3.32
2960 4767 2.999355 GAGTCTCTGAATCTGCACAACC 59.001 50.000 0.00 0.00 0.00 3.77
2961 4768 2.636893 AGTCTCTGAATCTGCACAACCT 59.363 45.455 0.00 0.00 0.00 3.50
2962 4769 2.740981 GTCTCTGAATCTGCACAACCTG 59.259 50.000 0.00 0.00 0.00 4.00
2963 4770 2.369860 TCTCTGAATCTGCACAACCTGT 59.630 45.455 0.00 0.00 0.00 4.00
2964 4771 2.740981 CTCTGAATCTGCACAACCTGTC 59.259 50.000 0.00 0.00 0.00 3.51
2965 4772 1.462283 CTGAATCTGCACAACCTGTCG 59.538 52.381 0.00 0.00 0.00 4.35
2966 4773 1.202639 TGAATCTGCACAACCTGTCGT 60.203 47.619 0.00 0.00 0.00 4.34
2967 4774 1.461127 GAATCTGCACAACCTGTCGTC 59.539 52.381 0.00 0.00 0.00 4.20
2968 4775 0.392706 ATCTGCACAACCTGTCGTCA 59.607 50.000 0.00 0.00 0.00 4.35
2969 4776 0.249447 TCTGCACAACCTGTCGTCAG 60.249 55.000 2.40 2.40 41.01 3.51
2970 4777 0.249447 CTGCACAACCTGTCGTCAGA 60.249 55.000 11.41 0.00 43.76 3.27
2971 4778 0.249447 TGCACAACCTGTCGTCAGAG 60.249 55.000 11.41 4.18 43.76 3.35
2972 4779 0.249489 GCACAACCTGTCGTCAGAGT 60.249 55.000 11.41 4.79 43.76 3.24
2973 4780 1.806623 GCACAACCTGTCGTCAGAGTT 60.807 52.381 11.41 10.24 43.76 3.01
2974 4781 1.860950 CACAACCTGTCGTCAGAGTTG 59.139 52.381 26.09 26.09 46.12 3.16
2975 4782 1.202533 ACAACCTGTCGTCAGAGTTGG 60.203 52.381 28.50 18.88 45.64 3.77
2976 4783 0.249911 AACCTGTCGTCAGAGTTGGC 60.250 55.000 11.41 0.00 43.76 4.52
2981 4788 2.780643 CGTCAGAGTTGGCGCATG 59.219 61.111 10.83 0.00 46.30 4.06
2982 4789 2.743752 CGTCAGAGTTGGCGCATGG 61.744 63.158 10.83 0.00 46.30 3.66
2983 4790 1.672356 GTCAGAGTTGGCGCATGGT 60.672 57.895 10.83 0.00 0.00 3.55
2984 4791 1.375908 TCAGAGTTGGCGCATGGTC 60.376 57.895 10.83 0.00 0.00 4.02
2985 4792 1.376424 CAGAGTTGGCGCATGGTCT 60.376 57.895 10.83 2.32 0.00 3.85
2986 4793 1.078848 AGAGTTGGCGCATGGTCTC 60.079 57.895 10.83 9.30 0.00 3.36
2987 4794 2.434884 AGTTGGCGCATGGTCTCG 60.435 61.111 10.83 0.00 0.00 4.04
2988 4795 2.434185 GTTGGCGCATGGTCTCGA 60.434 61.111 10.83 0.00 0.00 4.04
2989 4796 2.032634 GTTGGCGCATGGTCTCGAA 61.033 57.895 10.83 0.00 0.00 3.71
2990 4797 1.078497 TTGGCGCATGGTCTCGAAT 60.078 52.632 10.83 0.00 0.00 3.34
2991 4798 1.089481 TTGGCGCATGGTCTCGAATC 61.089 55.000 10.83 0.00 0.00 2.52
2992 4799 1.521457 GGCGCATGGTCTCGAATCA 60.521 57.895 10.83 0.00 0.00 2.57
2993 4800 1.493950 GGCGCATGGTCTCGAATCAG 61.494 60.000 10.83 0.00 0.00 2.90
2994 4801 0.528466 GCGCATGGTCTCGAATCAGA 60.528 55.000 0.30 0.00 0.00 3.27
2995 4802 1.871408 GCGCATGGTCTCGAATCAGAT 60.871 52.381 0.30 0.00 0.00 2.90
2996 4803 2.477825 CGCATGGTCTCGAATCAGATT 58.522 47.619 0.00 0.00 0.00 2.40
2997 4804 2.868583 CGCATGGTCTCGAATCAGATTT 59.131 45.455 0.00 0.00 0.00 2.17
2998 4805 3.060003 CGCATGGTCTCGAATCAGATTTC 60.060 47.826 0.00 0.00 0.00 2.17
2999 4806 3.873361 GCATGGTCTCGAATCAGATTTCA 59.127 43.478 0.00 0.00 0.00 2.69
3000 4807 4.260538 GCATGGTCTCGAATCAGATTTCAC 60.261 45.833 0.00 0.00 0.00 3.18
3001 4808 4.808414 TGGTCTCGAATCAGATTTCACT 57.192 40.909 0.00 0.00 0.00 3.41
3002 4809 4.498241 TGGTCTCGAATCAGATTTCACTG 58.502 43.478 0.00 0.00 39.02 3.66
3003 4810 4.021104 TGGTCTCGAATCAGATTTCACTGT 60.021 41.667 0.00 0.00 38.79 3.55
3004 4811 4.328440 GGTCTCGAATCAGATTTCACTGTG 59.672 45.833 0.17 0.17 38.79 3.66
3005 4812 4.328440 GTCTCGAATCAGATTTCACTGTGG 59.672 45.833 8.11 0.00 38.79 4.17
3006 4813 4.220602 TCTCGAATCAGATTTCACTGTGGA 59.779 41.667 8.11 0.00 38.79 4.02
3007 4814 5.089970 TCGAATCAGATTTCACTGTGGAT 57.910 39.130 8.11 2.73 38.79 3.41
3008 4815 4.872124 TCGAATCAGATTTCACTGTGGATG 59.128 41.667 8.11 0.00 38.79 3.51
3009 4816 4.872124 CGAATCAGATTTCACTGTGGATGA 59.128 41.667 8.11 0.44 38.79 2.92
3010 4817 5.006455 CGAATCAGATTTCACTGTGGATGAG 59.994 44.000 8.11 0.00 38.79 2.90
3011 4818 4.212143 TCAGATTTCACTGTGGATGAGG 57.788 45.455 8.11 0.00 38.79 3.86
3012 4819 3.584406 TCAGATTTCACTGTGGATGAGGT 59.416 43.478 8.11 0.00 38.79 3.85
3013 4820 3.937706 CAGATTTCACTGTGGATGAGGTC 59.062 47.826 8.11 0.00 33.73 3.85
3014 4821 3.584406 AGATTTCACTGTGGATGAGGTCA 59.416 43.478 8.11 0.00 0.00 4.02
3015 4822 3.855255 TTTCACTGTGGATGAGGTCAA 57.145 42.857 8.11 0.00 0.00 3.18
3016 4823 3.855255 TTCACTGTGGATGAGGTCAAA 57.145 42.857 8.11 0.00 0.00 2.69
3017 4824 3.855255 TCACTGTGGATGAGGTCAAAA 57.145 42.857 8.11 0.00 0.00 2.44
3018 4825 4.163441 TCACTGTGGATGAGGTCAAAAA 57.837 40.909 8.11 0.00 0.00 1.94
3019 4826 4.136796 TCACTGTGGATGAGGTCAAAAAG 58.863 43.478 8.11 0.00 0.00 2.27
3020 4827 3.254166 CACTGTGGATGAGGTCAAAAAGG 59.746 47.826 0.00 0.00 0.00 3.11
3021 4828 3.117512 ACTGTGGATGAGGTCAAAAAGGT 60.118 43.478 0.00 0.00 0.00 3.50
3022 4829 3.221771 TGTGGATGAGGTCAAAAAGGTG 58.778 45.455 0.00 0.00 0.00 4.00
3023 4830 3.117701 TGTGGATGAGGTCAAAAAGGTGA 60.118 43.478 0.00 0.00 0.00 4.02
3024 4831 4.082125 GTGGATGAGGTCAAAAAGGTGAT 58.918 43.478 0.00 0.00 0.00 3.06
3025 4832 4.524328 GTGGATGAGGTCAAAAAGGTGATT 59.476 41.667 0.00 0.00 0.00 2.57
3026 4833 5.710099 GTGGATGAGGTCAAAAAGGTGATTA 59.290 40.000 0.00 0.00 0.00 1.75
3027 4834 6.378280 GTGGATGAGGTCAAAAAGGTGATTAT 59.622 38.462 0.00 0.00 0.00 1.28
3028 4835 6.377996 TGGATGAGGTCAAAAAGGTGATTATG 59.622 38.462 0.00 0.00 0.00 1.90
3029 4836 6.183360 GGATGAGGTCAAAAAGGTGATTATGG 60.183 42.308 0.00 0.00 0.00 2.74
3030 4837 5.886609 TGAGGTCAAAAAGGTGATTATGGA 58.113 37.500 0.00 0.00 0.00 3.41
3031 4838 5.710099 TGAGGTCAAAAAGGTGATTATGGAC 59.290 40.000 0.00 0.00 0.00 4.02
3032 4839 5.640147 AGGTCAAAAAGGTGATTATGGACA 58.360 37.500 0.00 0.00 0.00 4.02
3033 4840 6.256053 AGGTCAAAAAGGTGATTATGGACAT 58.744 36.000 0.00 0.00 0.00 3.06
3034 4841 6.153340 AGGTCAAAAAGGTGATTATGGACATG 59.847 38.462 0.00 0.00 0.00 3.21
3035 4842 5.807011 GTCAAAAAGGTGATTATGGACATGC 59.193 40.000 0.00 0.00 0.00 4.06
3036 4843 5.105392 TCAAAAAGGTGATTATGGACATGCC 60.105 40.000 0.00 0.00 37.10 4.40
3037 4844 2.664402 AGGTGATTATGGACATGCCC 57.336 50.000 0.00 0.00 34.97 5.36
3038 4845 2.138542 AGGTGATTATGGACATGCCCT 58.861 47.619 0.00 0.00 34.97 5.19
3039 4846 2.107204 AGGTGATTATGGACATGCCCTC 59.893 50.000 0.00 0.00 34.97 4.30
3040 4847 2.508526 GTGATTATGGACATGCCCTCC 58.491 52.381 0.00 0.00 34.97 4.30
3041 4848 1.072173 TGATTATGGACATGCCCTCCG 59.928 52.381 0.00 0.00 34.97 4.63
3042 4849 1.347707 GATTATGGACATGCCCTCCGA 59.652 52.381 0.00 0.00 34.97 4.55
3043 4850 0.468226 TTATGGACATGCCCTCCGAC 59.532 55.000 0.00 0.00 34.97 4.79
3044 4851 0.689412 TATGGACATGCCCTCCGACA 60.689 55.000 0.00 0.00 34.97 4.35
3045 4852 1.976132 ATGGACATGCCCTCCGACAG 61.976 60.000 0.00 0.00 34.97 3.51
3046 4853 2.187946 GACATGCCCTCCGACAGG 59.812 66.667 0.00 0.00 43.01 4.00
3053 4860 3.211288 CCTCCGACAGGGCACTAG 58.789 66.667 0.00 0.00 38.91 2.57
3054 4861 2.427245 CCTCCGACAGGGCACTAGG 61.427 68.421 0.00 0.00 38.91 3.02
3055 4862 1.682684 CTCCGACAGGGCACTAGGT 60.683 63.158 0.00 0.00 38.33 3.08
3056 4863 1.668101 CTCCGACAGGGCACTAGGTC 61.668 65.000 0.00 0.00 38.33 3.85
3057 4864 2.722201 CCGACAGGGCACTAGGTCC 61.722 68.421 1.11 0.00 43.70 4.46
3062 4869 2.822399 GGGCACTAGGTCCGGATG 59.178 66.667 7.81 1.65 0.00 3.51
3063 4870 2.808206 GGGCACTAGGTCCGGATGG 61.808 68.421 7.81 0.00 0.00 3.51
3064 4871 2.109181 GCACTAGGTCCGGATGGC 59.891 66.667 7.81 1.54 34.14 4.40
3065 4872 2.435693 GCACTAGGTCCGGATGGCT 61.436 63.158 7.81 0.00 34.14 4.75
3066 4873 1.972660 GCACTAGGTCCGGATGGCTT 61.973 60.000 7.81 0.00 34.14 4.35
3067 4874 0.105039 CACTAGGTCCGGATGGCTTC 59.895 60.000 7.81 0.00 34.14 3.86
3068 4875 0.032017 ACTAGGTCCGGATGGCTTCT 60.032 55.000 7.81 1.60 34.14 2.85
3069 4876 0.676736 CTAGGTCCGGATGGCTTCTC 59.323 60.000 7.81 0.00 34.14 2.87
3070 4877 0.261991 TAGGTCCGGATGGCTTCTCT 59.738 55.000 7.81 0.00 34.14 3.10
3071 4878 1.144936 GGTCCGGATGGCTTCTCTG 59.855 63.158 7.81 0.00 34.14 3.35
3072 4879 1.144936 GTCCGGATGGCTTCTCTGG 59.855 63.158 7.81 2.53 40.04 3.86
3073 4880 1.001631 TCCGGATGGCTTCTCTGGA 59.998 57.895 0.00 8.25 44.22 3.86
3074 4881 1.144936 CCGGATGGCTTCTCTGGAC 59.855 63.158 0.00 0.00 41.00 4.02
3075 4882 1.333636 CCGGATGGCTTCTCTGGACT 61.334 60.000 0.00 0.00 41.00 3.85
3076 4883 0.179089 CGGATGGCTTCTCTGGACTG 60.179 60.000 0.07 0.00 0.00 3.51
3077 4884 0.908198 GGATGGCTTCTCTGGACTGT 59.092 55.000 0.07 0.00 0.00 3.55
3078 4885 1.280421 GGATGGCTTCTCTGGACTGTT 59.720 52.381 0.07 0.00 0.00 3.16
3079 4886 2.290577 GGATGGCTTCTCTGGACTGTTT 60.291 50.000 0.07 0.00 0.00 2.83
3080 4887 3.416156 GATGGCTTCTCTGGACTGTTTT 58.584 45.455 0.00 0.00 0.00 2.43
3081 4888 4.565652 GGATGGCTTCTCTGGACTGTTTTA 60.566 45.833 0.07 0.00 0.00 1.52
3082 4889 4.640771 TGGCTTCTCTGGACTGTTTTAT 57.359 40.909 0.00 0.00 0.00 1.40
3083 4890 5.755409 TGGCTTCTCTGGACTGTTTTATA 57.245 39.130 0.00 0.00 0.00 0.98
3084 4891 6.121776 TGGCTTCTCTGGACTGTTTTATAA 57.878 37.500 0.00 0.00 0.00 0.98
3085 4892 6.539173 TGGCTTCTCTGGACTGTTTTATAAA 58.461 36.000 0.00 0.00 0.00 1.40
3086 4893 7.001674 TGGCTTCTCTGGACTGTTTTATAAAA 58.998 34.615 6.54 6.54 0.00 1.52
3087 4894 7.504238 TGGCTTCTCTGGACTGTTTTATAAAAA 59.496 33.333 12.14 3.13 0.00 1.94
3088 4895 8.023706 GGCTTCTCTGGACTGTTTTATAAAAAG 58.976 37.037 12.14 13.18 0.00 2.27
3089 4896 8.568794 GCTTCTCTGGACTGTTTTATAAAAAGT 58.431 33.333 12.14 15.73 0.00 2.66
3090 4897 9.884465 CTTCTCTGGACTGTTTTATAAAAAGTG 57.116 33.333 20.65 13.47 0.00 3.16
3091 4898 7.871853 TCTCTGGACTGTTTTATAAAAAGTGC 58.128 34.615 22.69 22.69 33.07 4.40
3092 4899 6.977213 TCTGGACTGTTTTATAAAAAGTGCC 58.023 36.000 24.42 21.42 32.32 5.01
3093 4900 5.764131 TGGACTGTTTTATAAAAAGTGCCG 58.236 37.500 24.42 11.21 32.32 5.69
3094 4901 5.158494 GGACTGTTTTATAAAAAGTGCCGG 58.842 41.667 20.65 13.10 29.89 6.13
3095 4902 5.128992 ACTGTTTTATAAAAAGTGCCGGG 57.871 39.130 12.14 0.00 0.00 5.73
3096 4903 4.828387 ACTGTTTTATAAAAAGTGCCGGGA 59.172 37.500 12.14 0.00 0.00 5.14
3097 4904 5.479027 ACTGTTTTATAAAAAGTGCCGGGAT 59.521 36.000 12.14 0.00 0.00 3.85
3098 4905 6.660094 ACTGTTTTATAAAAAGTGCCGGGATA 59.340 34.615 12.14 0.00 0.00 2.59
3099 4906 7.340999 ACTGTTTTATAAAAAGTGCCGGGATAT 59.659 33.333 12.14 0.00 0.00 1.63
3100 4907 7.708998 TGTTTTATAAAAAGTGCCGGGATATC 58.291 34.615 12.14 0.00 0.00 1.63
3101 4908 7.339721 TGTTTTATAAAAAGTGCCGGGATATCA 59.660 33.333 12.14 0.00 0.00 2.15
3102 4909 8.357402 GTTTTATAAAAAGTGCCGGGATATCAT 58.643 33.333 12.14 0.00 0.00 2.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.220741 TGCTAGGTTGTAACATGCAAAAATA 57.779 32.000 0.00 0.00 31.03 1.40
1 2 6.095432 TGCTAGGTTGTAACATGCAAAAAT 57.905 33.333 0.00 0.00 31.03 1.82
163 170 4.119862 CAGGACCCATATGTTGTTCGTAG 58.880 47.826 1.24 0.00 0.00 3.51
220 227 5.211201 CAATCCTCCAATCCCCTATTTGTT 58.789 41.667 0.00 0.00 0.00 2.83
291 298 4.637534 TGATTAGGAGCATTCAAGAACAGC 59.362 41.667 0.00 2.02 0.00 4.40
336 345 8.323567 ACATCTAAAGGCAATGATTGGAAAATT 58.676 29.630 7.35 0.00 0.00 1.82
347 356 7.277098 CAGGAAATTCAACATCTAAAGGCAATG 59.723 37.037 0.00 0.00 0.00 2.82
356 365 8.634335 TCAAATGTCAGGAAATTCAACATCTA 57.366 30.769 7.86 0.00 30.56 1.98
404 413 8.297426 AGACGTTAAAGATGAAAAGGGAAATTC 58.703 33.333 0.00 0.00 0.00 2.17
453 462 3.186047 CGCGGCGGTCTGGTTAAG 61.186 66.667 15.84 0.00 0.00 1.85
526 535 3.616219 TGAAAGTCGGATACATTTGGGG 58.384 45.455 0.00 0.00 0.00 4.96
537 546 5.180271 ACACACTTAACTTTGAAAGTCGGA 58.820 37.500 11.44 0.00 41.91 4.55
541 550 8.788325 AACTAGACACACTTAACTTTGAAAGT 57.212 30.769 4.45 4.45 45.46 2.66
577 593 7.035612 GTCAGATCTTGTTTTTGTTTTGGTCT 58.964 34.615 0.00 0.00 0.00 3.85
636 657 7.086376 GCCCATATCAAGTTGTATGCATTTAG 58.914 38.462 3.54 0.00 0.00 1.85
639 660 4.894705 TGCCCATATCAAGTTGTATGCATT 59.105 37.500 3.54 0.00 0.00 3.56
796 821 1.535687 ACACACGCCCCCTAGAGTT 60.536 57.895 0.00 0.00 0.00 3.01
808 833 1.464608 CTTGCCACTATTCCACACACG 59.535 52.381 0.00 0.00 0.00 4.49
2047 2274 4.783621 TGAGCGGCACCTCCATGC 62.784 66.667 1.45 0.00 45.34 4.06
2060 2287 4.854784 TCGATGCGGACGCTGAGC 62.855 66.667 18.04 0.00 42.51 4.26
2120 2347 0.878523 CTTCAACTGCCACGAACGGA 60.879 55.000 0.00 0.00 0.00 4.69
2181 2444 5.521735 GCAAGTGTCCTCAATCATACTACAG 59.478 44.000 0.00 0.00 0.00 2.74
2184 2447 5.675684 TGCAAGTGTCCTCAATCATACTA 57.324 39.130 0.00 0.00 0.00 1.82
2248 3881 6.222389 AGCTCAGATAATTATGACTCAGCAC 58.778 40.000 11.10 0.00 0.00 4.40
2296 3932 6.257630 GGTGCACACAACAACAATAAAAATCT 59.742 34.615 20.43 0.00 31.96 2.40
2342 3989 4.236935 CCCAAAGGAAAATGATGTGTTCG 58.763 43.478 0.00 0.00 33.47 3.95
2393 4185 2.230508 AGCAGTTCATGGAGCATTGTTG 59.769 45.455 0.00 0.00 0.00 3.33
2398 4190 4.157289 CAGTTTAAGCAGTTCATGGAGCAT 59.843 41.667 0.00 0.00 0.00 3.79
2418 4210 4.502016 CTGTGCTCATGTCTAACATCAGT 58.498 43.478 0.00 0.00 36.53 3.41
2419 4211 3.309138 GCTGTGCTCATGTCTAACATCAG 59.691 47.826 0.00 0.00 36.53 2.90
2420 4212 3.055602 AGCTGTGCTCATGTCTAACATCA 60.056 43.478 0.00 0.00 36.53 3.07
2421 4213 3.529533 AGCTGTGCTCATGTCTAACATC 58.470 45.455 0.00 0.00 36.53 3.06
2422 4214 3.623906 AGCTGTGCTCATGTCTAACAT 57.376 42.857 0.00 0.00 39.91 2.71
2433 4225 2.990203 GACATCAGTCTGAGCTGTGCTC 60.990 54.545 12.75 12.12 44.22 4.26
2434 4226 0.975135 ACATCAGTCTGAGCTGTGCT 59.025 50.000 8.82 0.00 43.88 4.40
2435 4227 1.337541 TGACATCAGTCTGAGCTGTGC 60.338 52.381 12.75 6.50 45.20 4.57
2436 4228 2.738013 TGACATCAGTCTGAGCTGTG 57.262 50.000 12.75 6.71 45.20 3.66
2437 4229 2.896044 TCTTGACATCAGTCTGAGCTGT 59.104 45.455 8.82 8.66 45.20 4.40
2438 4230 3.589495 TCTTGACATCAGTCTGAGCTG 57.411 47.619 8.82 5.35 45.20 4.24
2439 4231 4.314121 GTTTCTTGACATCAGTCTGAGCT 58.686 43.478 8.82 0.00 45.20 4.09
2440 4232 3.122613 CGTTTCTTGACATCAGTCTGAGC 59.877 47.826 8.82 1.34 45.20 4.26
2441 4233 4.302455 ACGTTTCTTGACATCAGTCTGAG 58.698 43.478 8.82 3.54 45.20 3.35
2442 4234 4.322080 ACGTTTCTTGACATCAGTCTGA 57.678 40.909 4.68 4.68 45.20 3.27
2443 4235 5.223382 AGTACGTTTCTTGACATCAGTCTG 58.777 41.667 0.00 0.00 45.20 3.51
2444 4236 5.455056 AGTACGTTTCTTGACATCAGTCT 57.545 39.130 0.00 0.00 45.20 3.24
2445 4237 6.018994 ACAAAGTACGTTTCTTGACATCAGTC 60.019 38.462 0.00 0.00 45.19 3.51
2446 4238 5.815740 ACAAAGTACGTTTCTTGACATCAGT 59.184 36.000 0.00 0.00 0.00 3.41
2447 4239 6.129393 CACAAAGTACGTTTCTTGACATCAG 58.871 40.000 0.00 0.00 0.00 2.90
2448 4240 5.583061 ACACAAAGTACGTTTCTTGACATCA 59.417 36.000 0.00 0.00 0.00 3.07
2493 4285 4.639755 CCATCAAATAGCATGTGTGTGGTA 59.360 41.667 0.00 0.00 36.61 3.25
2558 4357 3.006967 TGAGCAGAGGTTCCTACTTGAAC 59.993 47.826 0.00 0.00 43.10 3.18
2568 4367 3.664107 TGTGTACATTGAGCAGAGGTTC 58.336 45.455 0.00 0.00 0.00 3.62
2574 4373 8.028354 TGGAAAAATTATGTGTACATTGAGCAG 58.972 33.333 0.00 0.00 37.76 4.24
2591 4390 7.340487 GGAGAGGTCATACAAGATGGAAAAATT 59.660 37.037 0.00 0.00 0.00 1.82
2592 4391 6.830838 GGAGAGGTCATACAAGATGGAAAAAT 59.169 38.462 0.00 0.00 0.00 1.82
2596 4395 4.361783 TGGAGAGGTCATACAAGATGGAA 58.638 43.478 0.00 0.00 0.00 3.53
2598 4397 4.760530 TTGGAGAGGTCATACAAGATGG 57.239 45.455 0.00 0.00 0.00 3.51
2600 4399 5.965033 ACATTGGAGAGGTCATACAAGAT 57.035 39.130 0.00 0.00 0.00 2.40
2631 4438 5.189736 ACTTCACTTCCTGATAGGCAATGTA 59.810 40.000 0.00 0.00 34.61 2.29
2637 4444 3.431486 CCTCACTTCACTTCCTGATAGGC 60.431 52.174 0.00 0.00 34.61 3.93
2638 4445 3.772025 ACCTCACTTCACTTCCTGATAGG 59.228 47.826 0.00 0.00 36.46 2.57
2639 4446 6.723298 ATACCTCACTTCACTTCCTGATAG 57.277 41.667 0.00 0.00 0.00 2.08
2640 4447 7.496346 AAATACCTCACTTCACTTCCTGATA 57.504 36.000 0.00 0.00 0.00 2.15
2641 4448 6.380079 AAATACCTCACTTCACTTCCTGAT 57.620 37.500 0.00 0.00 0.00 2.90
2642 4449 5.825593 AAATACCTCACTTCACTTCCTGA 57.174 39.130 0.00 0.00 0.00 3.86
2643 4450 6.884280 AAAAATACCTCACTTCACTTCCTG 57.116 37.500 0.00 0.00 0.00 3.86
2669 4476 0.823356 GCCAGGCACTTGTCCTTCAA 60.823 55.000 6.55 0.00 34.60 2.69
2670 4477 1.228245 GCCAGGCACTTGTCCTTCA 60.228 57.895 6.55 0.00 34.60 3.02
2671 4478 1.973812 GGCCAGGCACTTGTCCTTC 60.974 63.158 15.19 0.00 34.60 3.46
2672 4479 2.011617 AAGGCCAGGCACTTGTCCTT 62.012 55.000 15.19 2.09 34.60 3.36
2673 4480 2.011617 AAAGGCCAGGCACTTGTCCT 62.012 55.000 15.19 0.00 34.60 3.85
2674 4481 1.531602 AAAGGCCAGGCACTTGTCC 60.532 57.895 15.19 0.00 34.60 4.02
2675 4482 1.662044 CAAAGGCCAGGCACTTGTC 59.338 57.895 15.19 0.00 34.60 3.18
2676 4483 2.501602 GCAAAGGCCAGGCACTTGT 61.502 57.895 15.19 3.23 34.60 3.16
2677 4484 2.341176 GCAAAGGCCAGGCACTTG 59.659 61.111 15.19 16.27 34.60 3.16
2687 4494 1.081175 GTTCAAGCGAGGCAAAGGC 60.081 57.895 0.00 0.00 40.13 4.35
2688 4495 1.207593 CGTTCAAGCGAGGCAAAGG 59.792 57.895 0.00 0.00 0.00 3.11
2689 4496 0.384725 CACGTTCAAGCGAGGCAAAG 60.385 55.000 0.00 0.00 35.59 2.77
2690 4497 1.092921 ACACGTTCAAGCGAGGCAAA 61.093 50.000 0.00 0.00 35.59 3.68
2691 4498 1.092921 AACACGTTCAAGCGAGGCAA 61.093 50.000 0.00 0.00 35.59 4.52
2692 4499 1.495584 GAACACGTTCAAGCGAGGCA 61.496 55.000 5.05 0.00 39.31 4.75
2693 4500 1.204312 GAACACGTTCAAGCGAGGC 59.796 57.895 5.05 0.00 39.31 4.70
2694 4501 1.213094 ACGAACACGTTCAAGCGAGG 61.213 55.000 10.35 0.00 39.46 4.63
2695 4502 0.111704 CACGAACACGTTCAAGCGAG 60.112 55.000 10.35 0.00 39.46 5.03
2696 4503 0.802994 ACACGAACACGTTCAAGCGA 60.803 50.000 10.35 0.00 39.46 4.93
2697 4504 0.847670 TACACGAACACGTTCAAGCG 59.152 50.000 10.35 0.00 39.46 4.68
2698 4505 1.395080 CGTACACGAACACGTTCAAGC 60.395 52.381 10.35 0.00 43.02 4.01
2699 4506 2.531833 CGTACACGAACACGTTCAAG 57.468 50.000 10.35 4.30 43.02 3.02
2705 4512 0.155218 CGTTGACGTACACGAACACG 59.845 55.000 12.51 8.95 43.02 4.49
2706 4513 1.445731 CTCGTTGACGTACACGAACAC 59.554 52.381 19.04 0.96 43.02 3.32
2707 4514 1.745566 CTCGTTGACGTACACGAACA 58.254 50.000 19.04 5.65 43.02 3.18
2708 4515 0.428618 GCTCGTTGACGTACACGAAC 59.571 55.000 19.04 12.98 43.02 3.95
2709 4516 0.993251 CGCTCGTTGACGTACACGAA 60.993 55.000 19.04 6.93 43.02 3.85
2710 4517 1.439201 CGCTCGTTGACGTACACGA 60.439 57.895 17.89 17.89 43.02 4.35
2711 4518 0.993251 TTCGCTCGTTGACGTACACG 60.993 55.000 11.78 11.78 46.33 4.49
2712 4519 0.701303 CTTCGCTCGTTGACGTACAC 59.299 55.000 3.25 0.00 40.80 2.90
2713 4520 0.386352 CCTTCGCTCGTTGACGTACA 60.386 55.000 3.25 0.00 40.80 2.90
2714 4521 0.386478 ACCTTCGCTCGTTGACGTAC 60.386 55.000 3.25 0.00 40.80 3.67
2715 4522 0.386352 CACCTTCGCTCGTTGACGTA 60.386 55.000 3.25 0.00 40.80 3.57
2716 4523 1.660575 CACCTTCGCTCGTTGACGT 60.661 57.895 3.25 0.00 40.80 4.34
2717 4524 3.000080 GCACCTTCGCTCGTTGACG 62.000 63.158 0.00 0.00 41.45 4.35
2718 4525 2.853914 GCACCTTCGCTCGTTGAC 59.146 61.111 0.00 0.00 0.00 3.18
2719 4526 2.733218 CGCACCTTCGCTCGTTGA 60.733 61.111 0.00 0.00 0.00 3.18
2720 4527 3.777925 CCGCACCTTCGCTCGTTG 61.778 66.667 0.00 0.00 0.00 4.10
2723 4530 4.514577 ATCCCGCACCTTCGCTCG 62.515 66.667 0.00 0.00 0.00 5.03
2724 4531 2.586357 GATCCCGCACCTTCGCTC 60.586 66.667 0.00 0.00 0.00 5.03
2725 4532 3.077556 AGATCCCGCACCTTCGCT 61.078 61.111 0.00 0.00 0.00 4.93
2726 4533 2.586357 GAGATCCCGCACCTTCGC 60.586 66.667 0.00 0.00 0.00 4.70
2727 4534 0.807667 CTTGAGATCCCGCACCTTCG 60.808 60.000 0.00 0.00 0.00 3.79
2728 4535 0.462759 CCTTGAGATCCCGCACCTTC 60.463 60.000 0.00 0.00 0.00 3.46
2729 4536 0.909610 TCCTTGAGATCCCGCACCTT 60.910 55.000 0.00 0.00 0.00 3.50
2730 4537 0.909610 TTCCTTGAGATCCCGCACCT 60.910 55.000 0.00 0.00 0.00 4.00
2731 4538 0.462759 CTTCCTTGAGATCCCGCACC 60.463 60.000 0.00 0.00 0.00 5.01
2732 4539 0.462759 CCTTCCTTGAGATCCCGCAC 60.463 60.000 0.00 0.00 0.00 5.34
2733 4540 0.909610 ACCTTCCTTGAGATCCCGCA 60.910 55.000 0.00 0.00 0.00 5.69
2734 4541 0.462759 CACCTTCCTTGAGATCCCGC 60.463 60.000 0.00 0.00 0.00 6.13
2735 4542 1.195115 TCACCTTCCTTGAGATCCCG 58.805 55.000 0.00 0.00 0.00 5.14
2736 4543 2.747799 GCATCACCTTCCTTGAGATCCC 60.748 54.545 0.00 0.00 0.00 3.85
2737 4544 2.172293 AGCATCACCTTCCTTGAGATCC 59.828 50.000 0.00 0.00 0.00 3.36
2738 4545 3.118482 TCAGCATCACCTTCCTTGAGATC 60.118 47.826 0.00 0.00 0.00 2.75
2739 4546 2.842496 TCAGCATCACCTTCCTTGAGAT 59.158 45.455 0.00 0.00 0.00 2.75
2740 4547 2.027745 GTCAGCATCACCTTCCTTGAGA 60.028 50.000 0.00 0.00 0.00 3.27
2741 4548 2.289882 TGTCAGCATCACCTTCCTTGAG 60.290 50.000 0.00 0.00 0.00 3.02
2742 4549 1.699083 TGTCAGCATCACCTTCCTTGA 59.301 47.619 0.00 0.00 0.00 3.02
2743 4550 1.808945 GTGTCAGCATCACCTTCCTTG 59.191 52.381 0.00 0.00 0.00 3.61
2744 4551 2.191128 GTGTCAGCATCACCTTCCTT 57.809 50.000 0.00 0.00 0.00 3.36
2745 4552 3.944476 GTGTCAGCATCACCTTCCT 57.056 52.632 0.00 0.00 0.00 3.36
2751 4558 4.142600 GGAAGTATTTGGTGTCAGCATCAC 60.143 45.833 5.39 4.55 35.10 3.06
2752 4559 4.009675 GGAAGTATTTGGTGTCAGCATCA 58.990 43.478 5.39 0.00 33.20 3.07
2753 4560 4.009675 TGGAAGTATTTGGTGTCAGCATC 58.990 43.478 5.39 0.00 0.00 3.91
2754 4561 3.758554 GTGGAAGTATTTGGTGTCAGCAT 59.241 43.478 5.39 0.00 0.00 3.79
2755 4562 3.146066 GTGGAAGTATTTGGTGTCAGCA 58.854 45.455 0.00 0.00 0.00 4.41
2756 4563 3.146066 TGTGGAAGTATTTGGTGTCAGC 58.854 45.455 0.00 0.00 0.00 4.26
2757 4564 5.003160 TCATGTGGAAGTATTTGGTGTCAG 58.997 41.667 0.00 0.00 0.00 3.51
2758 4565 4.979335 TCATGTGGAAGTATTTGGTGTCA 58.021 39.130 0.00 0.00 0.00 3.58
2759 4566 5.957842 TTCATGTGGAAGTATTTGGTGTC 57.042 39.130 0.00 0.00 0.00 3.67
2760 4567 5.278957 GCTTTCATGTGGAAGTATTTGGTGT 60.279 40.000 3.17 0.00 36.72 4.16
2761 4568 5.163513 GCTTTCATGTGGAAGTATTTGGTG 58.836 41.667 3.17 0.00 36.72 4.17
2762 4569 4.082787 CGCTTTCATGTGGAAGTATTTGGT 60.083 41.667 3.17 0.00 36.72 3.67
2763 4570 4.155826 TCGCTTTCATGTGGAAGTATTTGG 59.844 41.667 3.17 0.00 36.72 3.28
2764 4571 5.295431 TCGCTTTCATGTGGAAGTATTTG 57.705 39.130 3.17 0.00 36.72 2.32
2765 4572 5.616866 CGTTCGCTTTCATGTGGAAGTATTT 60.617 40.000 3.17 0.00 36.72 1.40
2766 4573 4.142902 CGTTCGCTTTCATGTGGAAGTATT 60.143 41.667 3.17 0.00 36.72 1.89
2767 4574 3.370978 CGTTCGCTTTCATGTGGAAGTAT 59.629 43.478 3.17 0.00 36.72 2.12
2768 4575 2.734606 CGTTCGCTTTCATGTGGAAGTA 59.265 45.455 3.17 0.00 36.72 2.24
2769 4576 1.531149 CGTTCGCTTTCATGTGGAAGT 59.469 47.619 3.17 0.00 36.72 3.01
2770 4577 1.135972 CCGTTCGCTTTCATGTGGAAG 60.136 52.381 0.00 0.00 36.72 3.46
2771 4578 0.871722 CCGTTCGCTTTCATGTGGAA 59.128 50.000 0.00 0.00 0.00 3.53
2772 4579 0.953471 CCCGTTCGCTTTCATGTGGA 60.953 55.000 0.00 0.00 0.00 4.02
2773 4580 1.501741 CCCGTTCGCTTTCATGTGG 59.498 57.895 0.00 0.00 0.00 4.17
2774 4581 1.154225 GCCCGTTCGCTTTCATGTG 60.154 57.895 0.00 0.00 0.00 3.21
2775 4582 2.677003 CGCCCGTTCGCTTTCATGT 61.677 57.895 0.00 0.00 0.00 3.21
2776 4583 2.098298 CGCCCGTTCGCTTTCATG 59.902 61.111 0.00 0.00 0.00 3.07
2789 4596 1.914531 AAATGTTTACGACGGCGCCC 61.915 55.000 23.46 6.76 42.48 6.13
2790 4597 0.720590 TAAATGTTTACGACGGCGCC 59.279 50.000 19.07 19.07 42.48 6.53
2791 4598 2.507275 TTAAATGTTTACGACGGCGC 57.493 45.000 12.58 0.00 42.48 6.53
2792 4599 4.508052 GGTATTAAATGTTTACGACGGCG 58.492 43.478 10.39 10.39 44.79 6.46
2793 4600 4.571984 AGGGTATTAAATGTTTACGACGGC 59.428 41.667 0.00 0.00 0.00 5.68
2794 4601 6.200854 GGTAGGGTATTAAATGTTTACGACGG 59.799 42.308 0.00 0.00 0.00 4.79
2795 4602 6.980397 AGGTAGGGTATTAAATGTTTACGACG 59.020 38.462 0.00 0.00 0.00 5.12
2796 4603 7.981225 TGAGGTAGGGTATTAAATGTTTACGAC 59.019 37.037 0.00 0.00 0.00 4.34
2797 4604 8.076910 TGAGGTAGGGTATTAAATGTTTACGA 57.923 34.615 0.00 0.00 0.00 3.43
2798 4605 8.721019 TTGAGGTAGGGTATTAAATGTTTACG 57.279 34.615 0.00 0.00 0.00 3.18
2801 4608 8.943594 TGTTTGAGGTAGGGTATTAAATGTTT 57.056 30.769 0.00 0.00 0.00 2.83
2802 4609 7.614192 CCTGTTTGAGGTAGGGTATTAAATGTT 59.386 37.037 0.00 0.00 37.02 2.71
2803 4610 7.116736 CCTGTTTGAGGTAGGGTATTAAATGT 58.883 38.462 0.00 0.00 37.02 2.71
2804 4611 6.546034 CCCTGTTTGAGGTAGGGTATTAAATG 59.454 42.308 0.00 0.00 45.00 2.32
2805 4612 6.669631 CCCTGTTTGAGGTAGGGTATTAAAT 58.330 40.000 0.00 0.00 45.00 1.40
2806 4613 6.069705 CCCTGTTTGAGGTAGGGTATTAAA 57.930 41.667 0.00 0.00 45.00 1.52
2807 4614 5.703730 CCCTGTTTGAGGTAGGGTATTAA 57.296 43.478 0.00 0.00 45.00 1.40
2814 4621 0.391263 GTCGCCCTGTTTGAGGTAGG 60.391 60.000 0.00 0.00 40.87 3.18
2815 4622 0.391263 GGTCGCCCTGTTTGAGGTAG 60.391 60.000 0.00 0.00 40.87 3.18
2816 4623 1.675219 GGTCGCCCTGTTTGAGGTA 59.325 57.895 0.00 0.00 40.87 3.08
2817 4624 2.430367 GGTCGCCCTGTTTGAGGT 59.570 61.111 0.00 0.00 40.87 3.85
2818 4625 2.725203 TTCGGTCGCCCTGTTTGAGG 62.725 60.000 0.00 0.00 42.38 3.86
2819 4626 0.673644 ATTCGGTCGCCCTGTTTGAG 60.674 55.000 0.00 0.00 0.00 3.02
2820 4627 0.250553 AATTCGGTCGCCCTGTTTGA 60.251 50.000 0.00 0.00 0.00 2.69
2821 4628 0.109781 CAATTCGGTCGCCCTGTTTG 60.110 55.000 0.00 0.00 0.00 2.93
2822 4629 1.862602 GCAATTCGGTCGCCCTGTTT 61.863 55.000 0.00 0.00 0.00 2.83
2823 4630 2.332654 GCAATTCGGTCGCCCTGTT 61.333 57.895 0.00 0.00 0.00 3.16
2824 4631 2.746277 GCAATTCGGTCGCCCTGT 60.746 61.111 0.00 0.00 0.00 4.00
2825 4632 3.508840 GGCAATTCGGTCGCCCTG 61.509 66.667 0.00 0.00 40.07 4.45
2826 4633 4.028490 TGGCAATTCGGTCGCCCT 62.028 61.111 1.60 0.00 45.63 5.19
2827 4634 3.810896 GTGGCAATTCGGTCGCCC 61.811 66.667 1.60 0.00 45.63 6.13
2828 4635 3.039202 CTGTGGCAATTCGGTCGCC 62.039 63.158 0.00 0.00 46.43 5.54
2829 4636 1.852067 AACTGTGGCAATTCGGTCGC 61.852 55.000 0.00 0.00 0.00 5.19
2830 4637 1.434555 TAACTGTGGCAATTCGGTCG 58.565 50.000 0.00 0.00 0.00 4.79
2831 4638 2.097466 CCATAACTGTGGCAATTCGGTC 59.903 50.000 0.00 0.00 31.43 4.79
2832 4639 2.091541 CCATAACTGTGGCAATTCGGT 58.908 47.619 0.00 0.00 31.43 4.69
2833 4640 2.364632 TCCATAACTGTGGCAATTCGG 58.635 47.619 0.00 0.00 39.19 4.30
2834 4641 3.689161 TCTTCCATAACTGTGGCAATTCG 59.311 43.478 0.00 0.00 39.19 3.34
2835 4642 4.943705 TCTCTTCCATAACTGTGGCAATTC 59.056 41.667 0.00 0.00 39.19 2.17
2836 4643 4.922206 TCTCTTCCATAACTGTGGCAATT 58.078 39.130 0.00 0.00 39.19 2.32
2837 4644 4.574674 TCTCTTCCATAACTGTGGCAAT 57.425 40.909 0.00 0.00 39.19 3.56
2838 4645 4.365514 TTCTCTTCCATAACTGTGGCAA 57.634 40.909 0.00 0.00 39.19 4.52
2839 4646 4.072131 GTTTCTCTTCCATAACTGTGGCA 58.928 43.478 0.00 0.00 39.19 4.92
2840 4647 4.327680 AGTTTCTCTTCCATAACTGTGGC 58.672 43.478 0.00 0.00 39.19 5.01
2841 4648 7.661847 AGTTTAGTTTCTCTTCCATAACTGTGG 59.338 37.037 0.00 0.00 40.76 4.17
2842 4649 8.608844 AGTTTAGTTTCTCTTCCATAACTGTG 57.391 34.615 0.00 0.00 33.28 3.66
2843 4650 9.057089 CAAGTTTAGTTTCTCTTCCATAACTGT 57.943 33.333 0.00 0.00 33.28 3.55
2844 4651 8.507249 CCAAGTTTAGTTTCTCTTCCATAACTG 58.493 37.037 0.00 0.00 33.28 3.16
2845 4652 7.175119 GCCAAGTTTAGTTTCTCTTCCATAACT 59.825 37.037 0.00 0.00 35.25 2.24
2846 4653 7.306213 GCCAAGTTTAGTTTCTCTTCCATAAC 58.694 38.462 0.00 0.00 0.00 1.89
2847 4654 6.148811 CGCCAAGTTTAGTTTCTCTTCCATAA 59.851 38.462 0.00 0.00 0.00 1.90
2848 4655 5.642063 CGCCAAGTTTAGTTTCTCTTCCATA 59.358 40.000 0.00 0.00 0.00 2.74
2849 4656 4.455877 CGCCAAGTTTAGTTTCTCTTCCAT 59.544 41.667 0.00 0.00 0.00 3.41
2850 4657 3.813166 CGCCAAGTTTAGTTTCTCTTCCA 59.187 43.478 0.00 0.00 0.00 3.53
2851 4658 3.188667 CCGCCAAGTTTAGTTTCTCTTCC 59.811 47.826 0.00 0.00 0.00 3.46
2852 4659 3.188667 CCCGCCAAGTTTAGTTTCTCTTC 59.811 47.826 0.00 0.00 0.00 2.87
2853 4660 3.146847 CCCGCCAAGTTTAGTTTCTCTT 58.853 45.455 0.00 0.00 0.00 2.85
2854 4661 2.370849 TCCCGCCAAGTTTAGTTTCTCT 59.629 45.455 0.00 0.00 0.00 3.10
2855 4662 2.742589 CTCCCGCCAAGTTTAGTTTCTC 59.257 50.000 0.00 0.00 0.00 2.87
2856 4663 2.370849 TCTCCCGCCAAGTTTAGTTTCT 59.629 45.455 0.00 0.00 0.00 2.52
2857 4664 2.774687 TCTCCCGCCAAGTTTAGTTTC 58.225 47.619 0.00 0.00 0.00 2.78
2858 4665 2.943036 TCTCCCGCCAAGTTTAGTTT 57.057 45.000 0.00 0.00 0.00 2.66
2859 4666 2.943036 TTCTCCCGCCAAGTTTAGTT 57.057 45.000 0.00 0.00 0.00 2.24
2860 4667 3.009143 AGAATTCTCCCGCCAAGTTTAGT 59.991 43.478 0.88 0.00 0.00 2.24
2861 4668 3.610911 AGAATTCTCCCGCCAAGTTTAG 58.389 45.455 0.88 0.00 0.00 1.85
2862 4669 3.713826 AGAATTCTCCCGCCAAGTTTA 57.286 42.857 0.88 0.00 0.00 2.01
2863 4670 2.586648 AGAATTCTCCCGCCAAGTTT 57.413 45.000 0.88 0.00 0.00 2.66
2864 4671 2.437413 GAAGAATTCTCCCGCCAAGTT 58.563 47.619 8.78 0.00 43.23 2.66
2865 4672 2.115343 GAAGAATTCTCCCGCCAAGT 57.885 50.000 8.78 0.00 43.23 3.16
2877 4684 3.131755 GCCCATTAGCTTGCTGAAGAATT 59.868 43.478 5.26 0.00 0.00 2.17
2878 4685 2.692041 GCCCATTAGCTTGCTGAAGAAT 59.308 45.455 5.26 0.00 0.00 2.40
2879 4686 2.094675 GCCCATTAGCTTGCTGAAGAA 58.905 47.619 5.26 0.00 0.00 2.52
2880 4687 1.004628 TGCCCATTAGCTTGCTGAAGA 59.995 47.619 5.26 0.00 0.00 2.87
2881 4688 1.133790 GTGCCCATTAGCTTGCTGAAG 59.866 52.381 5.26 0.00 0.00 3.02
2882 4689 1.176527 GTGCCCATTAGCTTGCTGAA 58.823 50.000 5.26 0.00 0.00 3.02
2883 4690 0.680921 GGTGCCCATTAGCTTGCTGA 60.681 55.000 5.26 0.00 0.00 4.26
2884 4691 1.669999 GGGTGCCCATTAGCTTGCTG 61.670 60.000 5.26 0.00 35.81 4.41
2885 4692 1.380380 GGGTGCCCATTAGCTTGCT 60.380 57.895 1.66 0.00 35.81 3.91
2886 4693 2.426406 GGGGTGCCCATTAGCTTGC 61.426 63.158 9.76 0.00 44.65 4.01
2887 4694 2.120909 CGGGGTGCCCATTAGCTTG 61.121 63.158 9.76 0.00 45.83 4.01
2888 4695 2.275418 CGGGGTGCCCATTAGCTT 59.725 61.111 9.76 0.00 45.83 3.74
2889 4696 3.809013 CCGGGGTGCCCATTAGCT 61.809 66.667 9.76 0.00 45.83 3.32
2890 4697 3.774599 CTCCGGGGTGCCCATTAGC 62.775 68.421 9.76 0.00 45.83 3.09
2891 4698 2.510906 CTCCGGGGTGCCCATTAG 59.489 66.667 9.76 0.00 45.83 1.73
2892 4699 3.804329 GCTCCGGGGTGCCCATTA 61.804 66.667 1.62 0.00 45.83 1.90
2902 4709 1.407656 TATTACTGGCCAGCTCCGGG 61.408 60.000 33.06 8.68 36.80 5.73
2903 4710 0.034059 CTATTACTGGCCAGCTCCGG 59.966 60.000 33.06 16.08 38.47 5.14
2904 4711 0.034059 CCTATTACTGGCCAGCTCCG 59.966 60.000 33.06 16.53 0.00 4.63
2905 4712 1.346068 CTCCTATTACTGGCCAGCTCC 59.654 57.143 33.06 0.00 0.00 4.70
2906 4713 2.043227 ACTCCTATTACTGGCCAGCTC 58.957 52.381 33.06 0.00 0.00 4.09
2907 4714 2.182516 ACTCCTATTACTGGCCAGCT 57.817 50.000 33.06 21.13 0.00 4.24
2908 4715 2.485657 GGAACTCCTATTACTGGCCAGC 60.486 54.545 33.06 11.25 0.00 4.85
2909 4716 3.041946 AGGAACTCCTATTACTGGCCAG 58.958 50.000 31.60 31.60 46.48 4.85
2910 4717 3.130734 AGGAACTCCTATTACTGGCCA 57.869 47.619 4.71 4.71 46.48 5.36
2929 4736 1.079543 CAGAGACTCCCACCGCAAG 60.080 63.158 0.00 0.00 0.00 4.01
2930 4737 1.118965 TTCAGAGACTCCCACCGCAA 61.119 55.000 0.00 0.00 0.00 4.85
2931 4738 0.904865 ATTCAGAGACTCCCACCGCA 60.905 55.000 0.00 0.00 0.00 5.69
2932 4739 0.179097 GATTCAGAGACTCCCACCGC 60.179 60.000 0.00 0.00 0.00 5.68
2933 4740 1.135915 CAGATTCAGAGACTCCCACCG 59.864 57.143 0.00 0.00 0.00 4.94
2934 4741 1.134551 GCAGATTCAGAGACTCCCACC 60.135 57.143 0.00 0.00 0.00 4.61
2935 4742 1.552337 TGCAGATTCAGAGACTCCCAC 59.448 52.381 0.00 0.00 0.00 4.61
2936 4743 1.552337 GTGCAGATTCAGAGACTCCCA 59.448 52.381 0.00 0.00 0.00 4.37
2937 4744 1.552337 TGTGCAGATTCAGAGACTCCC 59.448 52.381 0.00 0.00 0.00 4.30
2938 4745 2.999355 GTTGTGCAGATTCAGAGACTCC 59.001 50.000 0.00 0.00 0.00 3.85
2939 4746 2.999355 GGTTGTGCAGATTCAGAGACTC 59.001 50.000 0.00 0.00 0.00 3.36
2940 4747 2.636893 AGGTTGTGCAGATTCAGAGACT 59.363 45.455 0.00 0.00 0.00 3.24
2941 4748 2.740981 CAGGTTGTGCAGATTCAGAGAC 59.259 50.000 0.00 0.00 0.00 3.36
2942 4749 2.369860 ACAGGTTGTGCAGATTCAGAGA 59.630 45.455 0.00 0.00 0.00 3.10
2943 4750 2.740981 GACAGGTTGTGCAGATTCAGAG 59.259 50.000 0.00 0.00 0.00 3.35
2944 4751 2.771089 GACAGGTTGTGCAGATTCAGA 58.229 47.619 0.00 0.00 0.00 3.27
2945 4752 1.462283 CGACAGGTTGTGCAGATTCAG 59.538 52.381 0.00 0.00 0.00 3.02
2946 4753 1.202639 ACGACAGGTTGTGCAGATTCA 60.203 47.619 0.00 0.00 0.00 2.57
2947 4754 1.461127 GACGACAGGTTGTGCAGATTC 59.539 52.381 0.00 0.00 0.00 2.52
2948 4755 1.202639 TGACGACAGGTTGTGCAGATT 60.203 47.619 0.00 0.00 0.00 2.40
2949 4756 0.392706 TGACGACAGGTTGTGCAGAT 59.607 50.000 0.00 0.00 0.00 2.90
2950 4757 0.249447 CTGACGACAGGTTGTGCAGA 60.249 55.000 7.02 0.00 40.14 4.26
2951 4758 0.249447 TCTGACGACAGGTTGTGCAG 60.249 55.000 14.76 5.29 43.60 4.41
2952 4759 0.249447 CTCTGACGACAGGTTGTGCA 60.249 55.000 14.76 0.00 43.60 4.57
2953 4760 0.249489 ACTCTGACGACAGGTTGTGC 60.249 55.000 14.76 0.00 43.60 4.57
2954 4761 1.860950 CAACTCTGACGACAGGTTGTG 59.139 52.381 25.44 13.59 42.78 3.33
2955 4762 1.202533 CCAACTCTGACGACAGGTTGT 60.203 52.381 28.23 18.22 44.23 3.32
2956 4763 1.502231 CCAACTCTGACGACAGGTTG 58.498 55.000 26.14 26.14 44.68 3.77
2957 4764 0.249911 GCCAACTCTGACGACAGGTT 60.250 55.000 14.76 13.72 43.60 3.50
2958 4765 1.367840 GCCAACTCTGACGACAGGT 59.632 57.895 14.76 8.79 43.60 4.00
2959 4766 1.734477 CGCCAACTCTGACGACAGG 60.734 63.158 14.76 8.19 43.60 4.00
2960 4767 2.375766 GCGCCAACTCTGACGACAG 61.376 63.158 8.68 8.68 44.66 3.51
2961 4768 2.355837 GCGCCAACTCTGACGACA 60.356 61.111 0.00 0.00 0.00 4.35
2962 4769 1.738099 ATGCGCCAACTCTGACGAC 60.738 57.895 4.18 0.00 0.00 4.34
2963 4770 1.737735 CATGCGCCAACTCTGACGA 60.738 57.895 4.18 0.00 0.00 4.20
2964 4771 2.743752 CCATGCGCCAACTCTGACG 61.744 63.158 4.18 0.00 0.00 4.35
2965 4772 1.639298 GACCATGCGCCAACTCTGAC 61.639 60.000 4.18 0.00 0.00 3.51
2966 4773 1.375908 GACCATGCGCCAACTCTGA 60.376 57.895 4.18 0.00 0.00 3.27
2967 4774 1.364626 GAGACCATGCGCCAACTCTG 61.365 60.000 4.18 0.00 0.00 3.35
2968 4775 1.078848 GAGACCATGCGCCAACTCT 60.079 57.895 4.18 0.00 0.00 3.24
2969 4776 2.456119 CGAGACCATGCGCCAACTC 61.456 63.158 4.18 6.05 0.00 3.01
2970 4777 2.434884 CGAGACCATGCGCCAACT 60.435 61.111 4.18 0.00 0.00 3.16
2971 4778 1.369091 ATTCGAGACCATGCGCCAAC 61.369 55.000 4.18 0.00 0.00 3.77
2972 4779 1.078497 ATTCGAGACCATGCGCCAA 60.078 52.632 4.18 0.00 0.00 4.52
2973 4780 1.521457 GATTCGAGACCATGCGCCA 60.521 57.895 4.18 0.00 0.00 5.69
2974 4781 1.493950 CTGATTCGAGACCATGCGCC 61.494 60.000 4.18 0.00 0.00 6.53
2975 4782 0.528466 TCTGATTCGAGACCATGCGC 60.528 55.000 0.00 0.00 0.00 6.09
2976 4783 2.145958 ATCTGATTCGAGACCATGCG 57.854 50.000 0.00 0.00 0.00 4.73
2977 4784 3.873361 TGAAATCTGATTCGAGACCATGC 59.127 43.478 2.92 0.00 31.80 4.06
2978 4785 5.006455 CAGTGAAATCTGATTCGAGACCATG 59.994 44.000 2.92 0.00 37.61 3.66
2979 4786 5.114780 CAGTGAAATCTGATTCGAGACCAT 58.885 41.667 2.92 0.00 37.61 3.55
2980 4787 4.021104 ACAGTGAAATCTGATTCGAGACCA 60.021 41.667 2.92 0.00 38.63 4.02
2981 4788 4.328440 CACAGTGAAATCTGATTCGAGACC 59.672 45.833 2.92 0.00 38.63 3.85
2982 4789 4.328440 CCACAGTGAAATCTGATTCGAGAC 59.672 45.833 0.62 0.00 38.63 3.36
2983 4790 4.220602 TCCACAGTGAAATCTGATTCGAGA 59.779 41.667 0.62 0.00 38.63 4.04
2984 4791 4.498241 TCCACAGTGAAATCTGATTCGAG 58.502 43.478 0.62 0.00 38.63 4.04
2985 4792 4.535526 TCCACAGTGAAATCTGATTCGA 57.464 40.909 0.62 0.00 38.63 3.71
2986 4793 4.872124 TCATCCACAGTGAAATCTGATTCG 59.128 41.667 0.62 0.00 38.63 3.34
2987 4794 5.296283 CCTCATCCACAGTGAAATCTGATTC 59.704 44.000 0.62 0.00 38.63 2.52
2988 4795 5.191426 CCTCATCCACAGTGAAATCTGATT 58.809 41.667 0.62 0.00 38.63 2.57
2989 4796 4.226846 ACCTCATCCACAGTGAAATCTGAT 59.773 41.667 0.62 0.00 38.63 2.90
2990 4797 3.584406 ACCTCATCCACAGTGAAATCTGA 59.416 43.478 0.62 0.00 38.63 3.27
2991 4798 3.937706 GACCTCATCCACAGTGAAATCTG 59.062 47.826 0.62 0.00 40.80 2.90
2992 4799 3.584406 TGACCTCATCCACAGTGAAATCT 59.416 43.478 0.62 0.00 0.00 2.40
2993 4800 3.942829 TGACCTCATCCACAGTGAAATC 58.057 45.455 0.62 0.00 0.00 2.17
2994 4801 4.371624 TTGACCTCATCCACAGTGAAAT 57.628 40.909 0.62 0.00 0.00 2.17
2995 4802 3.855255 TTGACCTCATCCACAGTGAAA 57.145 42.857 0.62 0.00 0.00 2.69
2996 4803 3.855255 TTTGACCTCATCCACAGTGAA 57.145 42.857 0.62 0.00 0.00 3.18
2997 4804 3.855255 TTTTGACCTCATCCACAGTGA 57.145 42.857 0.62 0.00 0.00 3.41
2998 4805 3.254166 CCTTTTTGACCTCATCCACAGTG 59.746 47.826 0.00 0.00 0.00 3.66
2999 4806 3.117512 ACCTTTTTGACCTCATCCACAGT 60.118 43.478 0.00 0.00 0.00 3.55
3000 4807 3.254166 CACCTTTTTGACCTCATCCACAG 59.746 47.826 0.00 0.00 0.00 3.66
3001 4808 3.117701 TCACCTTTTTGACCTCATCCACA 60.118 43.478 0.00 0.00 0.00 4.17
3002 4809 3.486383 TCACCTTTTTGACCTCATCCAC 58.514 45.455 0.00 0.00 0.00 4.02
3003 4810 3.874383 TCACCTTTTTGACCTCATCCA 57.126 42.857 0.00 0.00 0.00 3.41
3004 4811 6.183360 CCATAATCACCTTTTTGACCTCATCC 60.183 42.308 0.00 0.00 0.00 3.51
3005 4812 6.603201 TCCATAATCACCTTTTTGACCTCATC 59.397 38.462 0.00 0.00 0.00 2.92
3006 4813 6.378280 GTCCATAATCACCTTTTTGACCTCAT 59.622 38.462 0.00 0.00 0.00 2.90
3007 4814 5.710099 GTCCATAATCACCTTTTTGACCTCA 59.290 40.000 0.00 0.00 0.00 3.86
3008 4815 5.710099 TGTCCATAATCACCTTTTTGACCTC 59.290 40.000 0.00 0.00 0.00 3.85
3009 4816 5.640147 TGTCCATAATCACCTTTTTGACCT 58.360 37.500 0.00 0.00 0.00 3.85
3010 4817 5.975693 TGTCCATAATCACCTTTTTGACC 57.024 39.130 0.00 0.00 0.00 4.02
3011 4818 5.807011 GCATGTCCATAATCACCTTTTTGAC 59.193 40.000 0.00 0.00 0.00 3.18
3012 4819 5.105392 GGCATGTCCATAATCACCTTTTTGA 60.105 40.000 0.00 0.00 34.01 2.69
3013 4820 5.111293 GGCATGTCCATAATCACCTTTTTG 58.889 41.667 0.00 0.00 34.01 2.44
3014 4821 4.162131 GGGCATGTCCATAATCACCTTTTT 59.838 41.667 12.68 0.00 36.21 1.94
3015 4822 3.706086 GGGCATGTCCATAATCACCTTTT 59.294 43.478 12.68 0.00 36.21 2.27
3016 4823 3.052642 AGGGCATGTCCATAATCACCTTT 60.053 43.478 20.74 0.00 36.21 3.11
3017 4824 2.515429 AGGGCATGTCCATAATCACCTT 59.485 45.455 20.74 0.00 36.21 3.50
3018 4825 2.107204 GAGGGCATGTCCATAATCACCT 59.893 50.000 20.74 0.00 36.21 4.00
3019 4826 2.508526 GAGGGCATGTCCATAATCACC 58.491 52.381 20.74 0.00 36.21 4.02
3020 4827 2.508526 GGAGGGCATGTCCATAATCAC 58.491 52.381 20.74 0.53 36.21 3.06
3021 4828 1.072173 CGGAGGGCATGTCCATAATCA 59.928 52.381 20.74 0.00 36.21 2.57
3022 4829 1.347707 TCGGAGGGCATGTCCATAATC 59.652 52.381 20.74 6.97 36.21 1.75
3023 4830 1.072331 GTCGGAGGGCATGTCCATAAT 59.928 52.381 20.74 0.00 36.21 1.28
3024 4831 0.468226 GTCGGAGGGCATGTCCATAA 59.532 55.000 20.74 0.00 36.21 1.90
3025 4832 0.689412 TGTCGGAGGGCATGTCCATA 60.689 55.000 20.74 0.00 36.21 2.74
3026 4833 1.976132 CTGTCGGAGGGCATGTCCAT 61.976 60.000 20.74 6.03 36.21 3.41
3027 4834 2.606213 TGTCGGAGGGCATGTCCA 60.606 61.111 20.74 0.00 36.21 4.02
3028 4835 2.187946 CTGTCGGAGGGCATGTCC 59.812 66.667 8.79 8.79 0.00 4.02
3029 4836 2.187946 CCTGTCGGAGGGCATGTC 59.812 66.667 0.00 0.00 38.36 3.06
3036 4843 2.427245 CCTAGTGCCCTGTCGGAGG 61.427 68.421 0.00 0.00 42.38 4.30
3037 4844 1.668101 GACCTAGTGCCCTGTCGGAG 61.668 65.000 0.00 0.00 0.00 4.63
3038 4845 1.681327 GACCTAGTGCCCTGTCGGA 60.681 63.158 0.00 0.00 0.00 4.55
3039 4846 2.722201 GGACCTAGTGCCCTGTCGG 61.722 68.421 0.00 0.00 0.00 4.79
3040 4847 2.893398 GGACCTAGTGCCCTGTCG 59.107 66.667 0.00 0.00 0.00 4.35
3041 4848 2.722201 CCGGACCTAGTGCCCTGTC 61.722 68.421 0.00 0.00 0.00 3.51
3042 4849 2.531483 ATCCGGACCTAGTGCCCTGT 62.531 60.000 6.12 0.00 0.00 4.00
3043 4850 1.762460 ATCCGGACCTAGTGCCCTG 60.762 63.158 6.12 0.00 0.00 4.45
3044 4851 1.762460 CATCCGGACCTAGTGCCCT 60.762 63.158 6.12 0.00 0.00 5.19
3045 4852 2.808206 CCATCCGGACCTAGTGCCC 61.808 68.421 6.12 0.00 0.00 5.36
3046 4853 2.822399 CCATCCGGACCTAGTGCC 59.178 66.667 6.12 0.00 0.00 5.01
3047 4854 1.972660 AAGCCATCCGGACCTAGTGC 61.973 60.000 6.12 3.21 0.00 4.40
3048 4855 0.105039 GAAGCCATCCGGACCTAGTG 59.895 60.000 6.12 0.00 0.00 2.74
3049 4856 0.032017 AGAAGCCATCCGGACCTAGT 60.032 55.000 6.12 0.00 0.00 2.57
3050 4857 0.676736 GAGAAGCCATCCGGACCTAG 59.323 60.000 6.12 0.00 0.00 3.02
3051 4858 0.261991 AGAGAAGCCATCCGGACCTA 59.738 55.000 6.12 0.00 0.00 3.08
3052 4859 1.002274 AGAGAAGCCATCCGGACCT 59.998 57.895 6.12 0.00 0.00 3.85
3053 4860 1.144936 CAGAGAAGCCATCCGGACC 59.855 63.158 6.12 0.00 0.00 4.46
3054 4861 1.144936 CCAGAGAAGCCATCCGGAC 59.855 63.158 6.12 0.00 0.00 4.79
3055 4862 1.001631 TCCAGAGAAGCCATCCGGA 59.998 57.895 6.61 6.61 0.00 5.14
3056 4863 1.144936 GTCCAGAGAAGCCATCCGG 59.855 63.158 0.00 0.00 0.00 5.14
3057 4864 0.179089 CAGTCCAGAGAAGCCATCCG 60.179 60.000 0.00 0.00 0.00 4.18
3058 4865 0.908198 ACAGTCCAGAGAAGCCATCC 59.092 55.000 0.00 0.00 0.00 3.51
3059 4866 2.777832 AACAGTCCAGAGAAGCCATC 57.222 50.000 0.00 0.00 0.00 3.51
3060 4867 3.515602 AAAACAGTCCAGAGAAGCCAT 57.484 42.857 0.00 0.00 0.00 4.40
3061 4868 4.640771 ATAAAACAGTCCAGAGAAGCCA 57.359 40.909 0.00 0.00 0.00 4.75
3062 4869 7.448748 TTTTATAAAACAGTCCAGAGAAGCC 57.551 36.000 6.54 0.00 0.00 4.35
3063 4870 8.568794 ACTTTTTATAAAACAGTCCAGAGAAGC 58.431 33.333 10.18 0.00 0.00 3.86
3064 4871 9.884465 CACTTTTTATAAAACAGTCCAGAGAAG 57.116 33.333 10.18 3.75 0.00 2.85
3065 4872 8.349983 GCACTTTTTATAAAACAGTCCAGAGAA 58.650 33.333 10.18 0.00 0.00 2.87
3066 4873 7.040686 GGCACTTTTTATAAAACAGTCCAGAGA 60.041 37.037 10.18 0.00 0.00 3.10
3067 4874 7.084486 GGCACTTTTTATAAAACAGTCCAGAG 58.916 38.462 10.18 5.50 0.00 3.35
3068 4875 6.293735 CGGCACTTTTTATAAAACAGTCCAGA 60.294 38.462 10.18 0.00 0.00 3.86
3069 4876 5.856455 CGGCACTTTTTATAAAACAGTCCAG 59.144 40.000 10.18 6.80 0.00 3.86
3070 4877 5.278561 CCGGCACTTTTTATAAAACAGTCCA 60.279 40.000 10.18 0.00 0.00 4.02
3071 4878 5.158494 CCGGCACTTTTTATAAAACAGTCC 58.842 41.667 10.18 15.32 0.00 3.85
3072 4879 5.048573 TCCCGGCACTTTTTATAAAACAGTC 60.049 40.000 10.18 4.47 0.00 3.51
3073 4880 4.828387 TCCCGGCACTTTTTATAAAACAGT 59.172 37.500 10.18 12.98 0.00 3.55
3074 4881 5.379732 TCCCGGCACTTTTTATAAAACAG 57.620 39.130 10.18 12.45 0.00 3.16
3075 4882 5.986501 ATCCCGGCACTTTTTATAAAACA 57.013 34.783 10.18 2.22 0.00 2.83
3076 4883 7.708998 TGATATCCCGGCACTTTTTATAAAAC 58.291 34.615 10.18 0.00 0.00 2.43
3077 4884 7.883391 TGATATCCCGGCACTTTTTATAAAA 57.117 32.000 6.54 6.54 0.00 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.