Multiple sequence alignment - TraesCS3B01G027300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G027300 chr3B 100.000 3108 0 0 1 3108 11907458 11910565 0.000000e+00 5740.0
1 TraesCS3B01G027300 chr3B 92.612 1692 87 12 1432 3107 725543909 725545578 0.000000e+00 2398.0
2 TraesCS3B01G027300 chr3B 90.605 1703 93 25 1432 3107 691485435 691487097 0.000000e+00 2196.0
3 TraesCS3B01G027300 chr3B 85.526 304 33 5 246 545 11736660 11736956 1.080000e-79 307.0
4 TraesCS3B01G027300 chr3B 85.648 216 26 3 1 212 11736441 11736655 4.030000e-54 222.0
5 TraesCS3B01G027300 chr7B 95.401 2479 72 13 644 3107 320266378 320263927 0.000000e+00 3908.0
6 TraesCS3B01G027300 chr7B 87.481 1318 93 35 1432 2689 66321857 66323162 0.000000e+00 1454.0
7 TraesCS3B01G027300 chr7B 95.460 881 37 2 1435 2314 733294389 733293511 0.000000e+00 1402.0
8 TraesCS3B01G027300 chr7B 90.120 830 54 9 2293 3107 733270279 733269463 0.000000e+00 1053.0
9 TraesCS3B01G027300 chr7B 75.360 556 84 30 1 545 28686431 28686944 5.220000e-53 219.0
10 TraesCS3B01G027300 chr7B 78.088 251 48 4 289 539 206533849 206533606 5.370000e-33 152.0
11 TraesCS3B01G027300 chr4B 96.973 2015 46 1 961 2960 119310174 119312188 0.000000e+00 3369.0
12 TraesCS3B01G027300 chr1B 95.635 1535 63 3 1572 3105 176794328 176792797 0.000000e+00 2460.0
13 TraesCS3B01G027300 chr1B 89.263 1248 70 22 1887 3107 61977957 61979167 0.000000e+00 1504.0
14 TraesCS3B01G027300 chr1B 95.299 787 34 2 646 1430 176803728 176802943 0.000000e+00 1245.0
15 TraesCS3B01G027300 chr6B 91.662 1703 86 26 1432 3107 114059061 114060734 0.000000e+00 2307.0
16 TraesCS3B01G027300 chr3D 88.908 1722 114 43 1432 3107 155676799 155678489 0.000000e+00 2050.0
17 TraesCS3B01G027300 chr3D 88.673 1289 90 34 1435 2680 609770330 609769055 0.000000e+00 1520.0
18 TraesCS3B01G027300 chr3D 88.931 795 69 10 646 1434 447609823 447609042 0.000000e+00 963.0
19 TraesCS3B01G027300 chr1D 88.856 1714 114 40 1441 3107 422849833 422848150 0.000000e+00 2036.0
20 TraesCS3B01G027300 chr1D 78.723 235 43 5 282 516 401228515 401228742 1.930000e-32 150.0
21 TraesCS3B01G027300 chr1D 78.099 242 46 5 282 523 194054525 194054759 2.500000e-31 147.0
22 TraesCS3B01G027300 chr6D 87.741 1713 112 34 1441 3107 387623736 387622076 0.000000e+00 1910.0
23 TraesCS3B01G027300 chr6D 78.723 235 43 5 282 516 48298989 48299216 1.930000e-32 150.0
24 TraesCS3B01G027300 chr6D 78.947 228 41 5 289 516 286502522 286502742 6.940000e-32 148.0
25 TraesCS3B01G027300 chr2B 93.699 984 51 7 1441 2423 765113866 765112893 0.000000e+00 1463.0
26 TraesCS3B01G027300 chr5A 89.351 817 57 15 2306 3107 509130520 509131321 0.000000e+00 1000.0
27 TraesCS3B01G027300 chr4A 89.229 817 57 16 2306 3107 37982975 37982175 0.000000e+00 992.0
28 TraesCS3B01G027300 chr4A 89.277 802 68 11 646 1443 37984867 37984080 0.000000e+00 989.0
29 TraesCS3B01G027300 chr6A 89.166 803 57 15 2320 3107 532334409 532333622 0.000000e+00 974.0
30 TraesCS3B01G027300 chr5B 87.740 832 68 14 2287 3107 659492180 659492988 0.000000e+00 941.0
31 TraesCS3B01G027300 chr2A 87.657 794 79 10 646 1434 184517048 184516269 0.000000e+00 905.0
32 TraesCS3B01G027300 chr2A 87.345 806 71 18 2306 3107 721577089 721577867 0.000000e+00 894.0
33 TraesCS3B01G027300 chr2A 88.067 771 71 12 644 1408 751417378 751416623 0.000000e+00 894.0
34 TraesCS3B01G027300 chr2A 87.531 794 67 20 646 1434 202211690 202212456 0.000000e+00 889.0
35 TraesCS3B01G027300 chr2A 87.154 794 83 11 646 1434 54411403 54412182 0.000000e+00 883.0
36 TraesCS3B01G027300 chr2A 87.154 794 83 11 646 1434 54414730 54415509 0.000000e+00 883.0
37 TraesCS3B01G027300 chr2A 91.803 61 5 0 1374 1434 202212369 202212429 5.520000e-13 86.1
38 TraesCS3B01G027300 chr2A 88.060 67 6 2 1374 1438 751416685 751416619 9.240000e-11 78.7
39 TraesCS3B01G027300 chr1A 90.842 546 41 1 2560 3105 549441957 549442493 0.000000e+00 723.0
40 TraesCS3B01G027300 chrUn 83.513 558 66 11 1 545 269094440 269094984 5.990000e-137 497.0
41 TraesCS3B01G027300 chr7D 74.506 557 88 30 1 545 81759745 81760259 3.160000e-45 193.0
42 TraesCS3B01G027300 chr5D 78.723 235 43 5 282 516 556806558 556806785 1.930000e-32 150.0
43 TraesCS3B01G027300 chr2D 78.423 241 45 5 282 522 31330571 31330338 1.930000e-32 150.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G027300 chr3B 11907458 11910565 3107 False 5740.00 5740 100.0000 1 3108 1 chr3B.!!$F1 3107
1 TraesCS3B01G027300 chr3B 725543909 725545578 1669 False 2398.00 2398 92.6120 1432 3107 1 chr3B.!!$F3 1675
2 TraesCS3B01G027300 chr3B 691485435 691487097 1662 False 2196.00 2196 90.6050 1432 3107 1 chr3B.!!$F2 1675
3 TraesCS3B01G027300 chr3B 11736441 11736956 515 False 264.50 307 85.5870 1 545 2 chr3B.!!$F4 544
4 TraesCS3B01G027300 chr7B 320263927 320266378 2451 True 3908.00 3908 95.4010 644 3107 1 chr7B.!!$R2 2463
5 TraesCS3B01G027300 chr7B 66321857 66323162 1305 False 1454.00 1454 87.4810 1432 2689 1 chr7B.!!$F2 1257
6 TraesCS3B01G027300 chr7B 733293511 733294389 878 True 1402.00 1402 95.4600 1435 2314 1 chr7B.!!$R4 879
7 TraesCS3B01G027300 chr7B 733269463 733270279 816 True 1053.00 1053 90.1200 2293 3107 1 chr7B.!!$R3 814
8 TraesCS3B01G027300 chr7B 28686431 28686944 513 False 219.00 219 75.3600 1 545 1 chr7B.!!$F1 544
9 TraesCS3B01G027300 chr4B 119310174 119312188 2014 False 3369.00 3369 96.9730 961 2960 1 chr4B.!!$F1 1999
10 TraesCS3B01G027300 chr1B 176792797 176794328 1531 True 2460.00 2460 95.6350 1572 3105 1 chr1B.!!$R1 1533
11 TraesCS3B01G027300 chr1B 61977957 61979167 1210 False 1504.00 1504 89.2630 1887 3107 1 chr1B.!!$F1 1220
12 TraesCS3B01G027300 chr1B 176802943 176803728 785 True 1245.00 1245 95.2990 646 1430 1 chr1B.!!$R2 784
13 TraesCS3B01G027300 chr6B 114059061 114060734 1673 False 2307.00 2307 91.6620 1432 3107 1 chr6B.!!$F1 1675
14 TraesCS3B01G027300 chr3D 155676799 155678489 1690 False 2050.00 2050 88.9080 1432 3107 1 chr3D.!!$F1 1675
15 TraesCS3B01G027300 chr3D 609769055 609770330 1275 True 1520.00 1520 88.6730 1435 2680 1 chr3D.!!$R2 1245
16 TraesCS3B01G027300 chr3D 447609042 447609823 781 True 963.00 963 88.9310 646 1434 1 chr3D.!!$R1 788
17 TraesCS3B01G027300 chr1D 422848150 422849833 1683 True 2036.00 2036 88.8560 1441 3107 1 chr1D.!!$R1 1666
18 TraesCS3B01G027300 chr6D 387622076 387623736 1660 True 1910.00 1910 87.7410 1441 3107 1 chr6D.!!$R1 1666
19 TraesCS3B01G027300 chr2B 765112893 765113866 973 True 1463.00 1463 93.6990 1441 2423 1 chr2B.!!$R1 982
20 TraesCS3B01G027300 chr5A 509130520 509131321 801 False 1000.00 1000 89.3510 2306 3107 1 chr5A.!!$F1 801
21 TraesCS3B01G027300 chr4A 37982175 37984867 2692 True 990.50 992 89.2530 646 3107 2 chr4A.!!$R1 2461
22 TraesCS3B01G027300 chr6A 532333622 532334409 787 True 974.00 974 89.1660 2320 3107 1 chr6A.!!$R1 787
23 TraesCS3B01G027300 chr5B 659492180 659492988 808 False 941.00 941 87.7400 2287 3107 1 chr5B.!!$F1 820
24 TraesCS3B01G027300 chr2A 184516269 184517048 779 True 905.00 905 87.6570 646 1434 1 chr2A.!!$R1 788
25 TraesCS3B01G027300 chr2A 721577089 721577867 778 False 894.00 894 87.3450 2306 3107 1 chr2A.!!$F1 801
26 TraesCS3B01G027300 chr2A 54411403 54415509 4106 False 883.00 883 87.1540 646 1434 2 chr2A.!!$F2 788
27 TraesCS3B01G027300 chr2A 202211690 202212456 766 False 487.55 889 89.6670 646 1434 2 chr2A.!!$F3 788
28 TraesCS3B01G027300 chr2A 751416619 751417378 759 True 486.35 894 88.0635 644 1438 2 chr2A.!!$R2 794
29 TraesCS3B01G027300 chr1A 549441957 549442493 536 False 723.00 723 90.8420 2560 3105 1 chr1A.!!$F1 545
30 TraesCS3B01G027300 chrUn 269094440 269094984 544 False 497.00 497 83.5130 1 545 1 chrUn.!!$F1 544

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
334 335 0.030504 CGGTGAATTTGTGCAGTGCA 59.969 50.0 15.37 15.37 35.60 4.57 F
569 570 0.034059 CGTGGAGAAGCTGACCTTGT 59.966 55.0 0.00 0.00 32.78 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1687 5224 1.729586 TCTGGTTTACCTCAGGCTGT 58.27 50.0 15.27 0.00 36.82 4.40 R
2535 6416 0.670162 AACAATGAAGTGCAGCGCTT 59.33 45.0 21.36 21.36 36.87 4.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.162690 ATGGAGAAGGGCGGCGAC 62.163 66.667 12.98 8.16 0.00 5.19
20 21 4.821589 GAGAAGGGCGGCGACCAG 62.822 72.222 36.46 0.00 29.21 4.00
22 23 4.821589 GAAGGGCGGCGACCAGAG 62.822 72.222 36.46 0.00 29.21 3.35
31 32 2.048222 CGACCAGAGCGCCAAGAA 60.048 61.111 2.29 0.00 0.00 2.52
32 33 2.097038 CGACCAGAGCGCCAAGAAG 61.097 63.158 2.29 0.00 0.00 2.85
33 34 2.359230 ACCAGAGCGCCAAGAAGC 60.359 61.111 2.29 0.00 0.00 3.86
34 35 3.130160 CCAGAGCGCCAAGAAGCC 61.130 66.667 2.29 0.00 0.00 4.35
35 36 3.494336 CAGAGCGCCAAGAAGCCG 61.494 66.667 2.29 0.00 0.00 5.52
36 37 3.695606 AGAGCGCCAAGAAGCCGA 61.696 61.111 2.29 0.00 0.00 5.54
37 38 3.191539 GAGCGCCAAGAAGCCGAG 61.192 66.667 2.29 0.00 0.00 4.63
38 39 4.767255 AGCGCCAAGAAGCCGAGG 62.767 66.667 2.29 0.00 0.00 4.63
39 40 4.760047 GCGCCAAGAAGCCGAGGA 62.760 66.667 0.00 0.00 0.00 3.71
40 41 2.187946 CGCCAAGAAGCCGAGGAT 59.812 61.111 0.00 0.00 0.00 3.24
41 42 2.176273 CGCCAAGAAGCCGAGGATG 61.176 63.158 0.00 0.00 0.00 3.51
42 43 1.821332 GCCAAGAAGCCGAGGATGG 60.821 63.158 0.00 0.00 0.00 3.51
75 76 3.121030 CGGCCTCGGTGAAGCAAG 61.121 66.667 0.00 0.00 0.00 4.01
76 77 2.347490 GGCCTCGGTGAAGCAAGA 59.653 61.111 0.00 0.00 0.00 3.02
77 78 1.743252 GGCCTCGGTGAAGCAAGAG 60.743 63.158 0.00 0.00 0.00 2.85
78 79 1.293498 GCCTCGGTGAAGCAAGAGA 59.707 57.895 0.00 0.00 32.84 3.10
79 80 0.107945 GCCTCGGTGAAGCAAGAGAT 60.108 55.000 0.00 0.00 32.84 2.75
80 81 1.649664 CCTCGGTGAAGCAAGAGATG 58.350 55.000 0.00 0.00 32.84 2.90
81 82 1.649664 CTCGGTGAAGCAAGAGATGG 58.350 55.000 0.00 0.00 32.84 3.51
82 83 0.976641 TCGGTGAAGCAAGAGATGGT 59.023 50.000 0.00 0.00 42.88 3.55
83 84 1.066858 TCGGTGAAGCAAGAGATGGTC 60.067 52.381 0.00 0.00 39.29 4.02
84 85 1.363744 GGTGAAGCAAGAGATGGTCG 58.636 55.000 0.00 0.00 39.29 4.79
85 86 1.338200 GGTGAAGCAAGAGATGGTCGT 60.338 52.381 0.00 0.00 39.29 4.34
86 87 1.728971 GTGAAGCAAGAGATGGTCGTG 59.271 52.381 0.00 0.00 39.29 4.35
90 91 2.658538 CAAGAGATGGTCGTGCTCG 58.341 57.895 0.81 0.81 33.98 5.03
91 92 0.803768 CAAGAGATGGTCGTGCTCGG 60.804 60.000 8.49 0.00 37.69 4.63
92 93 1.949847 AAGAGATGGTCGTGCTCGGG 61.950 60.000 8.49 0.00 37.69 5.14
93 94 4.148825 AGATGGTCGTGCTCGGGC 62.149 66.667 0.00 0.00 37.69 6.13
110 111 3.564027 CACGAGGCGGGCGAAATC 61.564 66.667 4.61 0.00 0.00 2.17
113 114 3.564027 GAGGCGGGCGAAATCGTG 61.564 66.667 4.59 0.00 42.22 4.35
116 117 4.223964 GCGGGCGAAATCGTGCTC 62.224 66.667 4.59 0.00 42.22 4.26
126 127 2.277949 TCGTGCTCGCGATACAGC 60.278 61.111 10.36 10.62 35.83 4.40
127 128 3.323136 CGTGCTCGCGATACAGCC 61.323 66.667 10.36 2.97 34.47 4.85
128 129 2.105128 GTGCTCGCGATACAGCCT 59.895 61.111 10.36 0.00 34.47 4.58
129 130 1.946650 GTGCTCGCGATACAGCCTC 60.947 63.158 10.36 1.97 34.47 4.70
130 131 2.355244 GCTCGCGATACAGCCTCC 60.355 66.667 10.36 0.00 0.00 4.30
131 132 2.050895 CTCGCGATACAGCCTCCG 60.051 66.667 10.36 0.00 0.00 4.63
132 133 2.515290 TCGCGATACAGCCTCCGA 60.515 61.111 3.71 0.00 0.00 4.55
133 134 2.353607 CGCGATACAGCCTCCGAC 60.354 66.667 0.00 0.00 0.00 4.79
134 135 2.353607 GCGATACAGCCTCCGACG 60.354 66.667 0.00 0.00 0.00 5.12
135 136 2.831366 GCGATACAGCCTCCGACGA 61.831 63.158 0.00 0.00 0.00 4.20
136 137 1.950007 CGATACAGCCTCCGACGAT 59.050 57.895 0.00 0.00 0.00 3.73
137 138 0.386100 CGATACAGCCTCCGACGATG 60.386 60.000 0.00 0.00 0.00 3.84
138 139 0.039074 GATACAGCCTCCGACGATGG 60.039 60.000 0.00 0.00 0.00 3.51
139 140 0.467474 ATACAGCCTCCGACGATGGA 60.467 55.000 9.69 0.00 36.37 3.41
145 146 2.681591 TCCGACGATGGAGGTCCT 59.318 61.111 0.00 0.00 36.82 3.85
146 147 1.000019 TCCGACGATGGAGGTCCTT 60.000 57.895 0.00 0.00 36.82 3.36
147 148 0.256752 TCCGACGATGGAGGTCCTTA 59.743 55.000 0.00 0.00 36.82 2.69
148 149 1.133575 TCCGACGATGGAGGTCCTTAT 60.134 52.381 0.00 0.00 36.82 1.73
149 150 1.000163 CCGACGATGGAGGTCCTTATG 60.000 57.143 0.00 0.00 36.82 1.90
150 151 1.000163 CGACGATGGAGGTCCTTATGG 60.000 57.143 0.00 0.00 36.82 2.74
151 152 2.317040 GACGATGGAGGTCCTTATGGA 58.683 52.381 0.00 0.00 40.69 3.41
161 162 2.176247 TCCTTATGGACCTCACCCTC 57.824 55.000 0.00 0.00 37.46 4.30
162 163 1.132500 CCTTATGGACCTCACCCTCC 58.868 60.000 0.00 0.00 34.57 4.30
163 164 1.344496 CCTTATGGACCTCACCCTCCT 60.344 57.143 0.00 0.00 34.57 3.69
164 165 1.765314 CTTATGGACCTCACCCTCCTG 59.235 57.143 0.00 0.00 0.00 3.86
165 166 0.691078 TATGGACCTCACCCTCCTGC 60.691 60.000 0.00 0.00 0.00 4.85
166 167 2.607750 GGACCTCACCCTCCTGCA 60.608 66.667 0.00 0.00 0.00 4.41
167 168 2.664081 GGACCTCACCCTCCTGCAG 61.664 68.421 6.78 6.78 0.00 4.41
168 169 1.915769 GACCTCACCCTCCTGCAGT 60.916 63.158 13.81 0.00 0.00 4.40
169 170 2.177594 GACCTCACCCTCCTGCAGTG 62.178 65.000 13.81 4.73 0.00 3.66
170 171 2.046507 CTCACCCTCCTGCAGTGC 60.047 66.667 13.81 8.58 0.00 4.40
171 172 3.618780 CTCACCCTCCTGCAGTGCC 62.619 68.421 13.72 0.00 0.00 5.01
172 173 3.957586 CACCCTCCTGCAGTGCCA 61.958 66.667 13.72 0.00 0.00 4.92
173 174 3.958860 ACCCTCCTGCAGTGCCAC 61.959 66.667 13.72 0.00 0.00 5.01
174 175 3.644606 CCCTCCTGCAGTGCCACT 61.645 66.667 13.72 0.00 0.00 4.00
175 176 2.433446 CCTCCTGCAGTGCCACTT 59.567 61.111 13.72 0.00 0.00 3.16
176 177 1.673665 CCTCCTGCAGTGCCACTTC 60.674 63.158 13.72 0.00 0.00 3.01
177 178 1.374190 CTCCTGCAGTGCCACTTCT 59.626 57.895 13.72 0.00 0.00 2.85
178 179 0.610174 CTCCTGCAGTGCCACTTCTA 59.390 55.000 13.72 0.00 0.00 2.10
179 180 0.321671 TCCTGCAGTGCCACTTCTAC 59.678 55.000 13.72 0.00 0.00 2.59
180 181 0.322975 CCTGCAGTGCCACTTCTACT 59.677 55.000 13.72 0.00 0.00 2.57
181 182 1.674221 CCTGCAGTGCCACTTCTACTC 60.674 57.143 13.72 0.00 0.00 2.59
182 183 0.321671 TGCAGTGCCACTTCTACTCC 59.678 55.000 13.72 0.00 0.00 3.85
183 184 0.391793 GCAGTGCCACTTCTACTCCC 60.392 60.000 2.85 0.00 0.00 4.30
184 185 0.108615 CAGTGCCACTTCTACTCCCG 60.109 60.000 0.00 0.00 0.00 5.14
185 186 1.448013 GTGCCACTTCTACTCCCGC 60.448 63.158 0.00 0.00 0.00 6.13
186 187 2.187163 GCCACTTCTACTCCCGCC 59.813 66.667 0.00 0.00 0.00 6.13
187 188 2.901042 CCACTTCTACTCCCGCCC 59.099 66.667 0.00 0.00 0.00 6.13
188 189 2.732619 CCACTTCTACTCCCGCCCC 61.733 68.421 0.00 0.00 0.00 5.80
189 190 1.686110 CACTTCTACTCCCGCCCCT 60.686 63.158 0.00 0.00 0.00 4.79
190 191 1.080538 ACTTCTACTCCCGCCCCTT 59.919 57.895 0.00 0.00 0.00 3.95
191 192 1.265454 ACTTCTACTCCCGCCCCTTG 61.265 60.000 0.00 0.00 0.00 3.61
192 193 0.976073 CTTCTACTCCCGCCCCTTGA 60.976 60.000 0.00 0.00 0.00 3.02
193 194 0.545787 TTCTACTCCCGCCCCTTGAA 60.546 55.000 0.00 0.00 0.00 2.69
194 195 0.976073 TCTACTCCCGCCCCTTGAAG 60.976 60.000 0.00 0.00 0.00 3.02
195 196 2.595009 CTACTCCCGCCCCTTGAAGC 62.595 65.000 0.00 0.00 0.00 3.86
196 197 4.803908 CTCCCGCCCCTTGAAGCC 62.804 72.222 0.00 0.00 0.00 4.35
205 206 4.697756 CTTGAAGCCGCCCGTCCA 62.698 66.667 0.00 0.00 0.00 4.02
215 216 3.307906 CCCGTCCACCAGGTTCGA 61.308 66.667 9.40 0.00 36.21 3.71
216 217 2.048503 CCGTCCACCAGGTTCGAC 60.049 66.667 9.40 7.99 36.21 4.20
217 218 2.048503 CGTCCACCAGGTTCGACC 60.049 66.667 10.00 0.00 38.99 4.79
218 219 2.863346 CGTCCACCAGGTTCGACCA 61.863 63.158 10.00 0.00 41.95 4.02
219 220 1.677552 GTCCACCAGGTTCGACCAT 59.322 57.895 5.52 0.00 41.95 3.55
220 221 0.899720 GTCCACCAGGTTCGACCATA 59.100 55.000 5.52 0.00 41.95 2.74
221 222 1.485066 GTCCACCAGGTTCGACCATAT 59.515 52.381 5.52 0.00 41.95 1.78
222 223 2.696707 GTCCACCAGGTTCGACCATATA 59.303 50.000 5.52 0.00 41.95 0.86
223 224 3.323979 GTCCACCAGGTTCGACCATATAT 59.676 47.826 5.52 0.00 41.95 0.86
224 225 4.525487 GTCCACCAGGTTCGACCATATATA 59.475 45.833 5.52 0.00 41.95 0.86
225 226 5.187186 GTCCACCAGGTTCGACCATATATAT 59.813 44.000 5.52 0.00 41.95 0.86
226 227 5.421056 TCCACCAGGTTCGACCATATATATC 59.579 44.000 0.00 0.00 41.95 1.63
227 228 5.395324 CCACCAGGTTCGACCATATATATCC 60.395 48.000 0.00 0.00 41.95 2.59
228 229 4.715297 ACCAGGTTCGACCATATATATCCC 59.285 45.833 6.78 0.00 41.95 3.85
229 230 4.202121 CCAGGTTCGACCATATATATCCCG 60.202 50.000 6.78 0.00 41.95 5.14
230 231 4.401519 CAGGTTCGACCATATATATCCCGT 59.598 45.833 6.78 0.00 41.95 5.28
231 232 4.643784 AGGTTCGACCATATATATCCCGTC 59.356 45.833 6.78 0.00 41.95 4.79
232 233 4.202090 GGTTCGACCATATATATCCCGTCC 60.202 50.000 0.00 2.24 38.42 4.79
233 234 3.559069 TCGACCATATATATCCCGTCCC 58.441 50.000 0.00 0.00 0.00 4.46
234 235 2.626743 CGACCATATATATCCCGTCCCC 59.373 54.545 0.00 0.00 0.00 4.81
235 236 3.649843 GACCATATATATCCCGTCCCCA 58.350 50.000 0.00 0.00 0.00 4.96
236 237 4.232091 GACCATATATATCCCGTCCCCAT 58.768 47.826 0.00 0.00 0.00 4.00
237 238 4.232091 ACCATATATATCCCGTCCCCATC 58.768 47.826 0.00 0.00 0.00 3.51
238 239 3.258372 CCATATATATCCCGTCCCCATCG 59.742 52.174 0.00 0.00 0.00 3.84
239 240 2.840640 ATATATCCCGTCCCCATCGA 57.159 50.000 0.00 0.00 0.00 3.59
240 241 2.840640 TATATCCCGTCCCCATCGAT 57.159 50.000 0.00 0.00 0.00 3.59
241 242 1.952621 ATATCCCGTCCCCATCGATT 58.047 50.000 0.00 0.00 0.00 3.34
242 243 1.263356 TATCCCGTCCCCATCGATTC 58.737 55.000 0.00 0.00 0.00 2.52
243 244 0.471971 ATCCCGTCCCCATCGATTCT 60.472 55.000 0.00 0.00 0.00 2.40
244 245 0.689745 TCCCGTCCCCATCGATTCTT 60.690 55.000 0.00 0.00 0.00 2.52
245 246 0.180406 CCCGTCCCCATCGATTCTTT 59.820 55.000 0.00 0.00 0.00 2.52
246 247 1.583054 CCGTCCCCATCGATTCTTTC 58.417 55.000 0.00 0.00 0.00 2.62
247 248 1.583054 CGTCCCCATCGATTCTTTCC 58.417 55.000 0.00 0.00 0.00 3.13
248 249 1.139058 CGTCCCCATCGATTCTTTCCT 59.861 52.381 0.00 0.00 0.00 3.36
249 250 2.803492 CGTCCCCATCGATTCTTTCCTC 60.803 54.545 0.00 0.00 0.00 3.71
250 251 2.436173 GTCCCCATCGATTCTTTCCTCT 59.564 50.000 0.00 0.00 0.00 3.69
251 252 3.641906 GTCCCCATCGATTCTTTCCTCTA 59.358 47.826 0.00 0.00 0.00 2.43
252 253 4.284746 GTCCCCATCGATTCTTTCCTCTAT 59.715 45.833 0.00 0.00 0.00 1.98
253 254 4.907875 TCCCCATCGATTCTTTCCTCTATT 59.092 41.667 0.00 0.00 0.00 1.73
254 255 5.369699 TCCCCATCGATTCTTTCCTCTATTT 59.630 40.000 0.00 0.00 0.00 1.40
255 256 5.471456 CCCCATCGATTCTTTCCTCTATTTG 59.529 44.000 0.00 0.00 0.00 2.32
256 257 6.058183 CCCATCGATTCTTTCCTCTATTTGT 58.942 40.000 0.00 0.00 0.00 2.83
257 258 6.543831 CCCATCGATTCTTTCCTCTATTTGTT 59.456 38.462 0.00 0.00 0.00 2.83
258 259 7.254932 CCCATCGATTCTTTCCTCTATTTGTTC 60.255 40.741 0.00 0.00 0.00 3.18
259 260 7.254932 CCATCGATTCTTTCCTCTATTTGTTCC 60.255 40.741 0.00 0.00 0.00 3.62
260 261 6.113411 TCGATTCTTTCCTCTATTTGTTCCC 58.887 40.000 0.00 0.00 0.00 3.97
261 262 6.070194 TCGATTCTTTCCTCTATTTGTTCCCT 60.070 38.462 0.00 0.00 0.00 4.20
262 263 6.599638 CGATTCTTTCCTCTATTTGTTCCCTT 59.400 38.462 0.00 0.00 0.00 3.95
263 264 7.201652 CGATTCTTTCCTCTATTTGTTCCCTTC 60.202 40.741 0.00 0.00 0.00 3.46
264 265 6.448369 TCTTTCCTCTATTTGTTCCCTTCA 57.552 37.500 0.00 0.00 0.00 3.02
265 266 6.238648 TCTTTCCTCTATTTGTTCCCTTCAC 58.761 40.000 0.00 0.00 0.00 3.18
266 267 4.569719 TCCTCTATTTGTTCCCTTCACC 57.430 45.455 0.00 0.00 0.00 4.02
267 268 4.175962 TCCTCTATTTGTTCCCTTCACCT 58.824 43.478 0.00 0.00 0.00 4.00
268 269 4.225267 TCCTCTATTTGTTCCCTTCACCTC 59.775 45.833 0.00 0.00 0.00 3.85
269 270 4.019321 CCTCTATTTGTTCCCTTCACCTCA 60.019 45.833 0.00 0.00 0.00 3.86
270 271 4.906618 TCTATTTGTTCCCTTCACCTCAC 58.093 43.478 0.00 0.00 0.00 3.51
271 272 2.358322 TTTGTTCCCTTCACCTCACC 57.642 50.000 0.00 0.00 0.00 4.02
272 273 0.107831 TTGTTCCCTTCACCTCACCG 59.892 55.000 0.00 0.00 0.00 4.94
273 274 1.003718 GTTCCCTTCACCTCACCGG 60.004 63.158 0.00 0.00 39.35 5.28
274 275 2.221299 TTCCCTTCACCTCACCGGG 61.221 63.158 6.32 0.00 36.97 5.73
275 276 2.606519 CCCTTCACCTCACCGGGA 60.607 66.667 6.32 0.00 37.05 5.14
276 277 2.221299 CCCTTCACCTCACCGGGAA 61.221 63.158 6.32 0.00 37.05 3.97
277 278 1.758592 CCTTCACCTCACCGGGAAA 59.241 57.895 6.32 0.00 36.97 3.13
278 279 0.321653 CCTTCACCTCACCGGGAAAG 60.322 60.000 6.32 0.00 36.97 2.62
279 280 0.321653 CTTCACCTCACCGGGAAAGG 60.322 60.000 6.32 12.05 36.97 3.11
280 281 1.774894 TTCACCTCACCGGGAAAGGG 61.775 60.000 19.52 10.71 36.97 3.95
281 282 2.206036 ACCTCACCGGGAAAGGGA 59.794 61.111 19.52 1.96 36.97 4.20
282 283 1.918800 ACCTCACCGGGAAAGGGAG 60.919 63.158 19.52 10.12 36.97 4.30
283 284 2.670148 CCTCACCGGGAAAGGGAGG 61.670 68.421 6.32 8.22 40.11 4.30
284 285 3.327404 TCACCGGGAAAGGGAGGC 61.327 66.667 6.32 0.00 35.02 4.70
285 286 4.778143 CACCGGGAAAGGGAGGCG 62.778 72.222 6.32 0.00 35.02 5.52
291 292 4.717313 GAAAGGGAGGCGCGGGTT 62.717 66.667 8.83 0.00 0.00 4.11
292 293 4.280019 AAAGGGAGGCGCGGGTTT 62.280 61.111 8.83 0.00 0.00 3.27
293 294 4.717313 AAGGGAGGCGCGGGTTTC 62.717 66.667 8.83 0.00 0.00 2.78
295 296 4.717313 GGGAGGCGCGGGTTTCTT 62.717 66.667 8.83 0.00 0.00 2.52
296 297 3.431725 GGAGGCGCGGGTTTCTTG 61.432 66.667 8.83 0.00 0.00 3.02
297 298 2.358247 GAGGCGCGGGTTTCTTGA 60.358 61.111 8.83 0.00 0.00 3.02
298 299 2.358737 AGGCGCGGGTTTCTTGAG 60.359 61.111 8.83 0.00 0.00 3.02
299 300 2.668550 GGCGCGGGTTTCTTGAGT 60.669 61.111 8.83 0.00 0.00 3.41
300 301 2.258726 GGCGCGGGTTTCTTGAGTT 61.259 57.895 8.83 0.00 0.00 3.01
301 302 1.082104 GCGCGGGTTTCTTGAGTTG 60.082 57.895 8.83 0.00 0.00 3.16
302 303 1.503818 GCGCGGGTTTCTTGAGTTGA 61.504 55.000 8.83 0.00 0.00 3.18
303 304 0.234884 CGCGGGTTTCTTGAGTTGAC 59.765 55.000 0.00 0.00 0.00 3.18
304 305 0.234884 GCGGGTTTCTTGAGTTGACG 59.765 55.000 0.00 0.00 0.00 4.35
305 306 0.234884 CGGGTTTCTTGAGTTGACGC 59.765 55.000 0.00 0.00 0.00 5.19
306 307 0.234884 GGGTTTCTTGAGTTGACGCG 59.765 55.000 3.53 3.53 0.00 6.01
307 308 0.234884 GGTTTCTTGAGTTGACGCGG 59.765 55.000 12.47 0.00 0.00 6.46
308 309 0.935196 GTTTCTTGAGTTGACGCGGT 59.065 50.000 12.47 0.00 0.00 5.68
309 310 0.934496 TTTCTTGAGTTGACGCGGTG 59.066 50.000 12.47 0.00 0.00 4.94
310 311 0.179094 TTCTTGAGTTGACGCGGTGT 60.179 50.000 12.47 0.00 0.00 4.16
318 319 4.988486 GACGCGGTGTCGTTCGGT 62.988 66.667 12.47 0.00 43.42 4.69
320 321 4.986587 CGCGGTGTCGTTCGGTGA 62.987 66.667 0.00 0.00 38.89 4.02
321 322 2.659244 GCGGTGTCGTTCGGTGAA 60.659 61.111 0.00 0.00 38.89 3.18
322 323 2.025418 GCGGTGTCGTTCGGTGAAT 61.025 57.895 0.00 0.00 38.89 2.57
323 324 1.562575 GCGGTGTCGTTCGGTGAATT 61.563 55.000 0.00 0.00 38.89 2.17
324 325 0.863144 CGGTGTCGTTCGGTGAATTT 59.137 50.000 0.00 0.00 0.00 1.82
325 326 1.397945 CGGTGTCGTTCGGTGAATTTG 60.398 52.381 0.00 0.00 0.00 2.32
326 327 1.600485 GGTGTCGTTCGGTGAATTTGT 59.400 47.619 0.00 0.00 0.00 2.83
327 328 2.601266 GGTGTCGTTCGGTGAATTTGTG 60.601 50.000 0.00 0.00 0.00 3.33
328 329 1.003331 TGTCGTTCGGTGAATTTGTGC 60.003 47.619 0.00 0.00 0.00 4.57
329 330 1.003331 GTCGTTCGGTGAATTTGTGCA 60.003 47.619 0.00 0.00 0.00 4.57
330 331 1.262950 TCGTTCGGTGAATTTGTGCAG 59.737 47.619 0.00 0.00 0.00 4.41
331 332 1.002900 CGTTCGGTGAATTTGTGCAGT 60.003 47.619 0.00 0.00 0.00 4.40
332 333 2.384382 GTTCGGTGAATTTGTGCAGTG 58.616 47.619 0.00 0.00 0.00 3.66
333 334 0.310543 TCGGTGAATTTGTGCAGTGC 59.689 50.000 8.58 8.58 0.00 4.40
334 335 0.030504 CGGTGAATTTGTGCAGTGCA 59.969 50.000 15.37 15.37 35.60 4.57
335 336 1.535649 CGGTGAATTTGTGCAGTGCAA 60.536 47.619 21.67 4.60 41.47 4.08
336 337 1.860326 GGTGAATTTGTGCAGTGCAAC 59.140 47.619 21.67 12.35 41.47 4.17
337 338 2.538437 GTGAATTTGTGCAGTGCAACA 58.462 42.857 21.67 17.00 41.47 3.33
338 339 2.928757 GTGAATTTGTGCAGTGCAACAA 59.071 40.909 21.67 21.55 41.47 2.83
339 340 2.928757 TGAATTTGTGCAGTGCAACAAC 59.071 40.909 21.67 13.92 41.47 3.32
340 341 1.558741 ATTTGTGCAGTGCAACAACG 58.441 45.000 21.67 0.00 41.47 4.10
341 342 0.457509 TTTGTGCAGTGCAACAACGG 60.458 50.000 21.67 0.00 41.47 4.44
342 343 2.026014 GTGCAGTGCAACAACGGG 59.974 61.111 21.67 0.00 41.47 5.28
343 344 3.898509 TGCAGTGCAACAACGGGC 61.899 61.111 17.26 0.00 41.43 6.13
344 345 3.898509 GCAGTGCAACAACGGGCA 61.899 61.111 11.09 0.00 41.43 5.36
390 391 4.327885 GAGCGCCTCGGTAATGAG 57.672 61.111 2.29 0.00 37.83 2.90
391 392 1.951631 GAGCGCCTCGGTAATGAGC 60.952 63.158 2.29 0.00 37.83 4.26
393 394 2.658593 CGCCTCGGTAATGAGCGG 60.659 66.667 0.96 0.00 46.53 5.52
394 395 2.967615 GCCTCGGTAATGAGCGGC 60.968 66.667 0.96 0.00 46.53 6.53
395 396 2.499205 CCTCGGTAATGAGCGGCA 59.501 61.111 1.45 0.00 46.53 5.69
396 397 1.592669 CCTCGGTAATGAGCGGCAG 60.593 63.158 1.45 0.00 46.53 4.85
397 398 1.141881 CTCGGTAATGAGCGGCAGT 59.858 57.895 1.45 0.00 46.53 4.40
398 399 1.148157 CTCGGTAATGAGCGGCAGTG 61.148 60.000 1.45 0.00 46.53 3.66
399 400 2.813179 CGGTAATGAGCGGCAGTGC 61.813 63.158 6.55 6.55 42.86 4.40
400 401 2.472909 GGTAATGAGCGGCAGTGCC 61.473 63.158 25.07 25.07 46.75 5.01
410 411 2.666190 GCAGTGCCAGAAGTGCGA 60.666 61.111 2.85 0.00 36.80 5.10
411 412 2.675056 GCAGTGCCAGAAGTGCGAG 61.675 63.158 2.85 0.00 36.80 5.03
412 413 2.358003 AGTGCCAGAAGTGCGAGC 60.358 61.111 0.00 0.00 0.00 5.03
413 414 3.782244 GTGCCAGAAGTGCGAGCG 61.782 66.667 0.00 0.00 0.00 5.03
414 415 4.299547 TGCCAGAAGTGCGAGCGT 62.300 61.111 0.00 0.00 0.00 5.07
415 416 3.782244 GCCAGAAGTGCGAGCGTG 61.782 66.667 0.00 0.00 0.00 5.34
416 417 3.114616 CCAGAAGTGCGAGCGTGG 61.115 66.667 0.00 0.00 0.00 4.94
417 418 3.782244 CAGAAGTGCGAGCGTGGC 61.782 66.667 0.00 0.00 0.00 5.01
430 431 4.752879 GTGGCGGCGGCTTCTACA 62.753 66.667 33.21 10.13 39.81 2.74
431 432 3.781307 TGGCGGCGGCTTCTACAT 61.781 61.111 33.21 0.00 39.81 2.29
432 433 2.967615 GGCGGCGGCTTCTACATC 60.968 66.667 27.22 0.00 39.81 3.06
433 434 2.967615 GCGGCGGCTTCTACATCC 60.968 66.667 9.78 0.00 35.83 3.51
434 435 2.499205 CGGCGGCTTCTACATCCA 59.501 61.111 7.61 0.00 0.00 3.41
435 436 1.069765 CGGCGGCTTCTACATCCAT 59.930 57.895 7.61 0.00 0.00 3.41
436 437 0.317160 CGGCGGCTTCTACATCCATA 59.683 55.000 7.61 0.00 0.00 2.74
437 438 1.270094 CGGCGGCTTCTACATCCATAA 60.270 52.381 7.61 0.00 0.00 1.90
438 439 2.143925 GGCGGCTTCTACATCCATAAC 58.856 52.381 0.00 0.00 0.00 1.89
439 440 2.484770 GGCGGCTTCTACATCCATAACA 60.485 50.000 0.00 0.00 0.00 2.41
440 441 2.544267 GCGGCTTCTACATCCATAACAC 59.456 50.000 0.00 0.00 0.00 3.32
441 442 2.794910 CGGCTTCTACATCCATAACACG 59.205 50.000 0.00 0.00 0.00 4.49
442 443 3.131396 GGCTTCTACATCCATAACACGG 58.869 50.000 0.00 0.00 0.00 4.94
443 444 2.544267 GCTTCTACATCCATAACACGGC 59.456 50.000 0.00 0.00 0.00 5.68
444 445 2.502213 TCTACATCCATAACACGGCG 57.498 50.000 4.80 4.80 0.00 6.46
445 446 2.025898 TCTACATCCATAACACGGCGA 58.974 47.619 16.62 0.00 0.00 5.54
446 447 2.626266 TCTACATCCATAACACGGCGAT 59.374 45.455 16.62 1.24 0.00 4.58
447 448 2.325583 ACATCCATAACACGGCGATT 57.674 45.000 16.62 10.32 0.00 3.34
448 449 1.939934 ACATCCATAACACGGCGATTG 59.060 47.619 16.62 4.57 0.00 2.67
449 450 2.209273 CATCCATAACACGGCGATTGA 58.791 47.619 16.62 0.00 0.00 2.57
450 451 1.647346 TCCATAACACGGCGATTGAC 58.353 50.000 16.62 0.00 0.00 3.18
458 459 3.545911 GGCGATTGACGTCGTTGT 58.454 55.556 11.62 0.00 43.27 3.32
459 460 1.414897 GGCGATTGACGTCGTTGTC 59.585 57.895 11.62 3.96 43.27 3.18
460 461 1.007336 GGCGATTGACGTCGTTGTCT 61.007 55.000 11.62 0.00 43.27 3.41
461 462 0.362512 GCGATTGACGTCGTTGTCTC 59.637 55.000 11.62 0.44 43.27 3.36
462 463 0.982673 CGATTGACGTCGTTGTCTCC 59.017 55.000 11.62 0.00 39.64 3.71
463 464 0.982673 GATTGACGTCGTTGTCTCCG 59.017 55.000 11.62 0.00 39.64 4.63
464 465 1.007336 ATTGACGTCGTTGTCTCCGC 61.007 55.000 11.62 0.00 39.64 5.54
465 466 3.164011 GACGTCGTTGTCTCCGCG 61.164 66.667 0.00 0.00 35.95 6.46
466 467 4.695231 ACGTCGTTGTCTCCGCGG 62.695 66.667 22.12 22.12 32.16 6.46
515 516 4.379174 GCTCTTCGCCACTTTCCA 57.621 55.556 0.00 0.00 0.00 3.53
516 517 2.859992 GCTCTTCGCCACTTTCCAT 58.140 52.632 0.00 0.00 0.00 3.41
517 518 0.449388 GCTCTTCGCCACTTTCCATG 59.551 55.000 0.00 0.00 0.00 3.66
518 519 1.945819 GCTCTTCGCCACTTTCCATGA 60.946 52.381 0.00 0.00 0.00 3.07
519 520 2.005451 CTCTTCGCCACTTTCCATGAG 58.995 52.381 0.00 0.00 0.00 2.90
520 521 0.449388 CTTCGCCACTTTCCATGAGC 59.551 55.000 0.00 0.00 0.00 4.26
521 522 0.036732 TTCGCCACTTTCCATGAGCT 59.963 50.000 0.00 0.00 0.00 4.09
522 523 0.036732 TCGCCACTTTCCATGAGCTT 59.963 50.000 0.00 0.00 0.00 3.74
523 524 0.169672 CGCCACTTTCCATGAGCTTG 59.830 55.000 0.00 0.00 0.00 4.01
524 525 1.538047 GCCACTTTCCATGAGCTTGA 58.462 50.000 0.00 0.00 0.00 3.02
525 526 1.888512 GCCACTTTCCATGAGCTTGAA 59.111 47.619 0.00 0.00 0.00 2.69
526 527 2.094854 GCCACTTTCCATGAGCTTGAAG 60.095 50.000 0.00 0.00 0.00 3.02
527 528 3.415212 CCACTTTCCATGAGCTTGAAGA 58.585 45.455 0.00 0.00 0.00 2.87
528 529 3.190118 CCACTTTCCATGAGCTTGAAGAC 59.810 47.826 0.00 0.00 0.00 3.01
529 530 3.190118 CACTTTCCATGAGCTTGAAGACC 59.810 47.826 0.00 0.00 0.00 3.85
530 531 3.181440 ACTTTCCATGAGCTTGAAGACCA 60.181 43.478 0.00 0.00 0.00 4.02
531 532 3.507162 TTCCATGAGCTTGAAGACCAA 57.493 42.857 0.00 0.00 0.00 3.67
532 533 2.783135 TCCATGAGCTTGAAGACCAAC 58.217 47.619 0.00 0.00 0.00 3.77
533 534 2.106338 TCCATGAGCTTGAAGACCAACA 59.894 45.455 0.00 0.00 0.00 3.33
534 535 2.486982 CCATGAGCTTGAAGACCAACAG 59.513 50.000 0.00 0.00 0.00 3.16
535 536 2.260844 TGAGCTTGAAGACCAACAGG 57.739 50.000 0.00 0.00 0.00 4.00
536 537 1.202806 TGAGCTTGAAGACCAACAGGG 60.203 52.381 0.00 0.00 44.81 4.45
537 538 0.538287 AGCTTGAAGACCAACAGGGC 60.538 55.000 0.00 0.00 42.05 5.19
538 539 1.856265 GCTTGAAGACCAACAGGGCG 61.856 60.000 0.00 0.00 42.05 6.13
539 540 1.856265 CTTGAAGACCAACAGGGCGC 61.856 60.000 0.00 0.00 42.05 6.53
540 541 2.281484 GAAGACCAACAGGGCGCA 60.281 61.111 10.83 0.00 42.05 6.09
541 542 1.675641 GAAGACCAACAGGGCGCAT 60.676 57.895 10.83 0.00 42.05 4.73
542 543 1.926511 GAAGACCAACAGGGCGCATG 61.927 60.000 10.83 10.35 42.05 4.06
543 544 4.120331 GACCAACAGGGCGCATGC 62.120 66.667 10.83 7.91 42.05 4.06
556 557 2.815211 CATGCCGTCACCGTGGAG 60.815 66.667 0.00 0.00 0.00 3.86
557 558 2.994995 ATGCCGTCACCGTGGAGA 60.995 61.111 0.00 0.00 0.00 3.71
558 559 2.579657 ATGCCGTCACCGTGGAGAA 61.580 57.895 0.00 0.00 0.00 2.87
559 560 2.432628 GCCGTCACCGTGGAGAAG 60.433 66.667 0.00 0.00 0.00 2.85
560 561 2.432628 CCGTCACCGTGGAGAAGC 60.433 66.667 0.00 0.00 0.00 3.86
561 562 2.651361 CGTCACCGTGGAGAAGCT 59.349 61.111 0.00 0.00 0.00 3.74
562 563 1.734477 CGTCACCGTGGAGAAGCTG 60.734 63.158 0.00 0.00 0.00 4.24
563 564 1.666011 GTCACCGTGGAGAAGCTGA 59.334 57.895 0.00 0.00 0.00 4.26
564 565 0.667792 GTCACCGTGGAGAAGCTGAC 60.668 60.000 0.00 0.00 0.00 3.51
565 566 1.374758 CACCGTGGAGAAGCTGACC 60.375 63.158 0.00 0.00 0.00 4.02
566 567 1.534235 ACCGTGGAGAAGCTGACCT 60.534 57.895 0.00 0.00 0.00 3.85
567 568 1.122019 ACCGTGGAGAAGCTGACCTT 61.122 55.000 0.00 0.00 36.19 3.50
568 569 0.671781 CCGTGGAGAAGCTGACCTTG 60.672 60.000 0.00 0.00 32.78 3.61
569 570 0.034059 CGTGGAGAAGCTGACCTTGT 59.966 55.000 0.00 0.00 32.78 3.16
570 571 1.541233 CGTGGAGAAGCTGACCTTGTT 60.541 52.381 0.00 0.00 32.78 2.83
571 572 1.876156 GTGGAGAAGCTGACCTTGTTG 59.124 52.381 0.00 0.00 32.78 3.33
572 573 1.768275 TGGAGAAGCTGACCTTGTTGA 59.232 47.619 0.00 0.00 32.78 3.18
573 574 2.147150 GGAGAAGCTGACCTTGTTGAC 58.853 52.381 0.00 0.00 32.78 3.18
574 575 1.795286 GAGAAGCTGACCTTGTTGACG 59.205 52.381 0.00 0.00 32.78 4.35
575 576 0.868406 GAAGCTGACCTTGTTGACGG 59.132 55.000 0.00 0.00 32.78 4.79
576 577 0.180406 AAGCTGACCTTGTTGACGGT 59.820 50.000 0.00 0.00 35.90 4.83
577 578 0.532862 AGCTGACCTTGTTGACGGTG 60.533 55.000 0.00 0.00 32.62 4.94
578 579 1.941812 CTGACCTTGTTGACGGTGC 59.058 57.895 0.00 0.00 32.62 5.01
579 580 1.507141 CTGACCTTGTTGACGGTGCC 61.507 60.000 0.00 0.00 32.62 5.01
580 581 2.590575 ACCTTGTTGACGGTGCCG 60.591 61.111 9.29 9.29 46.03 5.69
581 582 4.025401 CCTTGTTGACGGTGCCGC 62.025 66.667 10.87 4.47 44.19 6.53
582 583 3.276091 CTTGTTGACGGTGCCGCA 61.276 61.111 10.87 7.06 44.19 5.69
583 584 3.521308 CTTGTTGACGGTGCCGCAC 62.521 63.158 15.50 15.50 44.19 5.34
588 589 4.796231 GACGGTGCCGCACGAGAT 62.796 66.667 17.13 2.46 44.19 2.75
600 601 2.084610 CACGAGATGCTTGTTGAGGA 57.915 50.000 0.00 0.00 0.00 3.71
601 602 2.625737 CACGAGATGCTTGTTGAGGAT 58.374 47.619 0.00 0.00 39.39 3.24
602 603 2.350804 CACGAGATGCTTGTTGAGGATG 59.649 50.000 0.00 0.00 36.45 3.51
603 604 1.329906 CGAGATGCTTGTTGAGGATGC 59.670 52.381 0.00 0.00 36.45 3.91
604 605 2.362736 GAGATGCTTGTTGAGGATGCA 58.637 47.619 0.00 0.00 36.45 3.96
605 606 2.089980 AGATGCTTGTTGAGGATGCAC 58.910 47.619 0.00 0.00 36.45 4.57
606 607 1.133790 GATGCTTGTTGAGGATGCACC 59.866 52.381 0.00 0.00 36.45 5.01
607 608 1.236616 TGCTTGTTGAGGATGCACCG 61.237 55.000 0.00 0.00 44.74 4.94
608 609 1.237285 GCTTGTTGAGGATGCACCGT 61.237 55.000 0.00 0.00 44.74 4.83
609 610 0.798776 CTTGTTGAGGATGCACCGTC 59.201 55.000 0.00 0.00 44.74 4.79
610 611 0.605319 TTGTTGAGGATGCACCGTCC 60.605 55.000 0.00 0.00 44.74 4.79
611 612 1.003839 GTTGAGGATGCACCGTCCA 60.004 57.895 7.56 0.00 41.68 4.02
612 613 1.021390 GTTGAGGATGCACCGTCCAG 61.021 60.000 7.56 0.00 41.68 3.86
613 614 2.184020 TTGAGGATGCACCGTCCAGG 62.184 60.000 7.56 0.00 41.68 4.45
614 615 2.284625 AGGATGCACCGTCCAGGA 60.285 61.111 7.56 0.00 45.00 3.86
615 616 2.125106 GGATGCACCGTCCAGGAC 60.125 66.667 9.92 9.92 45.00 3.85
624 625 2.342648 GTCCAGGACGGTTTCGCT 59.657 61.111 3.05 0.00 40.63 4.93
625 626 1.737008 GTCCAGGACGGTTTCGCTC 60.737 63.158 3.05 0.00 40.63 5.03
626 627 2.434359 CCAGGACGGTTTCGCTCC 60.434 66.667 0.00 0.00 40.63 4.70
632 633 2.399611 CGGTTTCGCTCCGCATTC 59.600 61.111 0.00 0.00 41.48 2.67
633 634 2.399611 GGTTTCGCTCCGCATTCG 59.600 61.111 0.00 0.00 0.00 3.34
634 635 2.276680 GTTTCGCTCCGCATTCGC 60.277 61.111 0.00 0.00 0.00 4.70
635 636 2.740440 TTTCGCTCCGCATTCGCA 60.740 55.556 0.00 0.00 38.40 5.10
636 637 2.106074 TTTCGCTCCGCATTCGCAT 61.106 52.632 0.00 0.00 38.40 4.73
637 638 1.643868 TTTCGCTCCGCATTCGCATT 61.644 50.000 0.00 0.00 38.40 3.56
638 639 2.308450 TTCGCTCCGCATTCGCATTG 62.308 55.000 0.00 0.00 38.40 2.82
639 640 2.812122 CGCTCCGCATTCGCATTGA 61.812 57.895 0.00 0.00 38.40 2.57
640 641 1.650912 GCTCCGCATTCGCATTGAT 59.349 52.632 0.00 0.00 38.40 2.57
641 642 0.867746 GCTCCGCATTCGCATTGATA 59.132 50.000 0.00 0.00 38.40 2.15
642 643 1.264020 GCTCCGCATTCGCATTGATAA 59.736 47.619 0.00 0.00 38.40 1.75
914 915 3.082579 GCCCGACCAGATCTCGCTT 62.083 63.158 0.00 0.00 0.00 4.68
934 935 0.760189 GCTCTCCTCTCTGCTCCCAT 60.760 60.000 0.00 0.00 0.00 4.00
1015 1034 3.080641 CCATGGTGTCCTGGAGCA 58.919 61.111 2.57 0.00 34.24 4.26
1319 1342 4.702612 TGTGCCACTGAAGTAAGTTTCAAA 59.297 37.500 0.00 0.00 36.69 2.69
1407 4943 5.250774 AGGGTTCATAGGTACTGTTCATGTT 59.749 40.000 0.00 0.00 41.52 2.71
1414 4950 4.426704 AGGTACTGTTCATGTTCTAGGGT 58.573 43.478 0.00 0.00 37.18 4.34
1422 4958 5.487488 TGTTCATGTTCTAGGGTTCATAGGT 59.513 40.000 0.00 0.00 0.00 3.08
1477 5013 5.712917 GGGTGTTGGAAATTGTGGATTAGTA 59.287 40.000 0.00 0.00 0.00 1.82
1663 5200 5.766670 TGAGAAGCTTGTTGAAGATGTGAAT 59.233 36.000 2.10 0.00 0.00 2.57
2535 6416 0.674581 CAGCATCTTCAGGCGTTGGA 60.675 55.000 0.00 0.00 34.54 3.53
2633 6621 1.339535 CCCTCCTCTTCTTGCTTGACC 60.340 57.143 0.00 0.00 0.00 4.02
2837 6831 2.159824 GTCGTCAGATTCGTCAGAGTCA 59.840 50.000 0.00 0.00 35.80 3.41
3002 7055 0.908910 TGGTGGATGAGCGGTACATT 59.091 50.000 0.00 0.00 0.00 2.71
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 4.821589 CTCTGGTCGCCGCCCTTC 62.822 72.222 0.00 0.00 0.00 3.46
14 15 2.048222 TTCTTGGCGCTCTGGTCG 60.048 61.111 7.64 0.00 0.00 4.79
15 16 2.394563 GCTTCTTGGCGCTCTGGTC 61.395 63.158 7.64 0.00 0.00 4.02
16 17 2.359230 GCTTCTTGGCGCTCTGGT 60.359 61.111 7.64 0.00 0.00 4.00
17 18 3.130160 GGCTTCTTGGCGCTCTGG 61.130 66.667 7.64 0.00 0.00 3.86
24 25 1.821332 CCATCCTCGGCTTCTTGGC 60.821 63.158 0.00 0.00 37.94 4.52
25 26 4.547859 CCATCCTCGGCTTCTTGG 57.452 61.111 0.00 0.00 0.00 3.61
33 34 2.908940 GCCATTGGCCATCCTCGG 60.909 66.667 17.28 3.98 44.06 4.63
58 59 3.121030 CTTGCTTCACCGAGGCCG 61.121 66.667 0.00 0.00 33.61 6.13
59 60 1.743252 CTCTTGCTTCACCGAGGCC 60.743 63.158 0.00 0.00 33.61 5.19
60 61 0.107945 ATCTCTTGCTTCACCGAGGC 60.108 55.000 0.00 0.00 35.17 4.70
61 62 1.649664 CATCTCTTGCTTCACCGAGG 58.350 55.000 0.00 0.00 0.00 4.63
62 63 1.066573 ACCATCTCTTGCTTCACCGAG 60.067 52.381 0.00 0.00 0.00 4.63
63 64 0.976641 ACCATCTCTTGCTTCACCGA 59.023 50.000 0.00 0.00 0.00 4.69
64 65 1.363744 GACCATCTCTTGCTTCACCG 58.636 55.000 0.00 0.00 0.00 4.94
65 66 1.338200 ACGACCATCTCTTGCTTCACC 60.338 52.381 0.00 0.00 0.00 4.02
66 67 1.728971 CACGACCATCTCTTGCTTCAC 59.271 52.381 0.00 0.00 0.00 3.18
67 68 1.941209 GCACGACCATCTCTTGCTTCA 60.941 52.381 0.00 0.00 40.30 3.02
68 69 0.723981 GCACGACCATCTCTTGCTTC 59.276 55.000 0.00 0.00 40.30 3.86
69 70 2.846371 GCACGACCATCTCTTGCTT 58.154 52.632 0.00 0.00 40.30 3.91
70 71 1.978473 AGCACGACCATCTCTTGCT 59.022 52.632 0.00 0.00 46.92 3.91
71 72 1.416813 CGAGCACGACCATCTCTTGC 61.417 60.000 0.00 0.00 43.11 4.01
72 73 0.803768 CCGAGCACGACCATCTCTTG 60.804 60.000 4.70 0.00 42.66 3.02
73 74 1.513158 CCGAGCACGACCATCTCTT 59.487 57.895 4.70 0.00 42.66 2.85
74 75 2.418910 CCCGAGCACGACCATCTCT 61.419 63.158 4.70 0.00 42.66 3.10
75 76 2.105128 CCCGAGCACGACCATCTC 59.895 66.667 4.70 0.00 42.66 2.75
76 77 4.148825 GCCCGAGCACGACCATCT 62.149 66.667 4.70 0.00 42.66 2.90
77 78 4.451150 TGCCCGAGCACGACCATC 62.451 66.667 4.70 0.00 46.52 3.51
93 94 3.564027 GATTTCGCCCGCCTCGTG 61.564 66.667 0.00 0.00 0.00 4.35
96 97 3.564027 CACGATTTCGCCCGCCTC 61.564 66.667 0.00 0.00 44.43 4.70
99 100 4.223964 GAGCACGATTTCGCCCGC 62.224 66.667 0.00 0.98 44.43 6.13
100 101 3.913573 CGAGCACGATTTCGCCCG 61.914 66.667 0.00 0.00 44.43 6.13
110 111 3.323136 GGCTGTATCGCGAGCACG 61.323 66.667 16.66 11.96 42.93 5.34
111 112 1.946650 GAGGCTGTATCGCGAGCAC 60.947 63.158 16.66 15.57 36.90 4.40
112 113 2.413351 GAGGCTGTATCGCGAGCA 59.587 61.111 16.66 15.12 36.90 4.26
113 114 2.355244 GGAGGCTGTATCGCGAGC 60.355 66.667 16.66 12.59 34.23 5.03
114 115 2.050895 CGGAGGCTGTATCGCGAG 60.051 66.667 16.66 0.99 0.00 5.03
115 116 2.515290 TCGGAGGCTGTATCGCGA 60.515 61.111 13.09 13.09 0.00 5.87
116 117 2.353607 GTCGGAGGCTGTATCGCG 60.354 66.667 0.00 0.00 0.00 5.87
117 118 2.131294 ATCGTCGGAGGCTGTATCGC 62.131 60.000 0.00 0.00 0.00 4.58
118 119 0.386100 CATCGTCGGAGGCTGTATCG 60.386 60.000 0.00 0.00 0.00 2.92
119 120 0.039074 CCATCGTCGGAGGCTGTATC 60.039 60.000 0.00 0.00 0.00 2.24
120 121 0.467474 TCCATCGTCGGAGGCTGTAT 60.467 55.000 0.00 0.00 0.00 2.29
121 122 1.077285 TCCATCGTCGGAGGCTGTA 60.077 57.895 0.00 0.00 0.00 2.74
122 123 2.362503 TCCATCGTCGGAGGCTGT 60.363 61.111 0.00 0.00 0.00 4.40
128 129 0.256752 TAAGGACCTCCATCGTCGGA 59.743 55.000 0.00 0.00 38.89 4.55
129 130 1.000163 CATAAGGACCTCCATCGTCGG 60.000 57.143 0.00 0.00 38.89 4.79
130 131 1.000163 CCATAAGGACCTCCATCGTCG 60.000 57.143 0.00 0.00 38.89 5.12
131 132 2.317040 TCCATAAGGACCTCCATCGTC 58.683 52.381 0.00 0.00 39.61 4.20
132 133 2.471815 TCCATAAGGACCTCCATCGT 57.528 50.000 0.00 0.00 39.61 3.73
142 143 1.344087 GGAGGGTGAGGTCCATAAGGA 60.344 57.143 0.00 0.00 43.21 3.36
143 144 1.132500 GGAGGGTGAGGTCCATAAGG 58.868 60.000 0.00 0.00 32.55 2.69
144 145 1.765314 CAGGAGGGTGAGGTCCATAAG 59.235 57.143 0.00 0.00 35.02 1.73
145 146 1.879575 CAGGAGGGTGAGGTCCATAA 58.120 55.000 0.00 0.00 35.02 1.90
146 147 0.691078 GCAGGAGGGTGAGGTCCATA 60.691 60.000 0.00 0.00 35.02 2.74
147 148 1.997874 GCAGGAGGGTGAGGTCCAT 60.998 63.158 0.00 0.00 35.02 3.41
148 149 2.607750 GCAGGAGGGTGAGGTCCA 60.608 66.667 0.00 0.00 35.02 4.02
149 150 2.607750 TGCAGGAGGGTGAGGTCC 60.608 66.667 0.00 0.00 0.00 4.46
150 151 1.915769 ACTGCAGGAGGGTGAGGTC 60.916 63.158 19.93 0.00 0.00 3.85
151 152 2.205462 ACTGCAGGAGGGTGAGGT 59.795 61.111 19.93 0.00 0.00 3.85
152 153 2.667418 CACTGCAGGAGGGTGAGG 59.333 66.667 19.93 0.00 33.32 3.86
153 154 2.046507 GCACTGCAGGAGGGTGAG 60.047 66.667 19.93 0.00 33.32 3.51
154 155 3.640407 GGCACTGCAGGAGGGTGA 61.640 66.667 19.93 0.00 33.32 4.02
155 156 3.957586 TGGCACTGCAGGAGGGTG 61.958 66.667 19.93 8.74 0.00 4.61
156 157 3.958860 GTGGCACTGCAGGAGGGT 61.959 66.667 19.93 0.00 0.00 4.34
157 158 3.201707 AAGTGGCACTGCAGGAGGG 62.202 63.158 22.83 5.63 0.00 4.30
158 159 1.673665 GAAGTGGCACTGCAGGAGG 60.674 63.158 22.83 8.31 0.00 4.30
159 160 0.610174 TAGAAGTGGCACTGCAGGAG 59.390 55.000 27.03 11.42 0.00 3.69
160 161 0.321671 GTAGAAGTGGCACTGCAGGA 59.678 55.000 27.03 9.45 0.00 3.86
161 162 0.322975 AGTAGAAGTGGCACTGCAGG 59.677 55.000 27.03 8.27 0.00 4.85
162 163 1.674221 GGAGTAGAAGTGGCACTGCAG 60.674 57.143 27.03 13.48 31.62 4.41
163 164 0.321671 GGAGTAGAAGTGGCACTGCA 59.678 55.000 27.03 10.70 31.62 4.41
164 165 0.391793 GGGAGTAGAAGTGGCACTGC 60.392 60.000 22.83 20.54 0.00 4.40
165 166 0.108615 CGGGAGTAGAAGTGGCACTG 60.109 60.000 22.83 0.67 0.00 3.66
166 167 1.889530 GCGGGAGTAGAAGTGGCACT 61.890 60.000 15.88 15.88 0.00 4.40
167 168 1.448013 GCGGGAGTAGAAGTGGCAC 60.448 63.158 10.29 10.29 0.00 5.01
168 169 2.656069 GGCGGGAGTAGAAGTGGCA 61.656 63.158 0.00 0.00 0.00 4.92
169 170 2.187163 GGCGGGAGTAGAAGTGGC 59.813 66.667 0.00 0.00 0.00 5.01
170 171 2.732619 GGGGCGGGAGTAGAAGTGG 61.733 68.421 0.00 0.00 0.00 4.00
171 172 1.265454 AAGGGGCGGGAGTAGAAGTG 61.265 60.000 0.00 0.00 0.00 3.16
172 173 1.080538 AAGGGGCGGGAGTAGAAGT 59.919 57.895 0.00 0.00 0.00 3.01
173 174 0.976073 TCAAGGGGCGGGAGTAGAAG 60.976 60.000 0.00 0.00 0.00 2.85
174 175 0.545787 TTCAAGGGGCGGGAGTAGAA 60.546 55.000 0.00 0.00 0.00 2.10
175 176 0.976073 CTTCAAGGGGCGGGAGTAGA 60.976 60.000 0.00 0.00 0.00 2.59
176 177 1.522569 CTTCAAGGGGCGGGAGTAG 59.477 63.158 0.00 0.00 0.00 2.57
177 178 2.666098 GCTTCAAGGGGCGGGAGTA 61.666 63.158 0.00 0.00 0.00 2.59
178 179 4.035102 GCTTCAAGGGGCGGGAGT 62.035 66.667 0.00 0.00 0.00 3.85
179 180 4.803908 GGCTTCAAGGGGCGGGAG 62.804 72.222 0.00 0.00 0.00 4.30
188 189 4.697756 TGGACGGGCGGCTTCAAG 62.698 66.667 9.56 0.00 0.00 3.02
199 200 2.048503 GTCGAACCTGGTGGACGG 60.049 66.667 13.46 0.00 37.31 4.79
200 201 2.048503 GGTCGAACCTGGTGGACG 60.049 66.667 19.14 16.06 34.73 4.79
201 202 0.899720 TATGGTCGAACCTGGTGGAC 59.100 55.000 18.17 18.17 39.58 4.02
202 203 1.874129 ATATGGTCGAACCTGGTGGA 58.126 50.000 0.00 0.00 39.58 4.02
203 204 5.395324 GGATATATATGGTCGAACCTGGTGG 60.395 48.000 0.00 0.00 39.58 4.61
204 205 5.395324 GGGATATATATGGTCGAACCTGGTG 60.395 48.000 0.00 0.00 39.58 4.17
205 206 4.715297 GGGATATATATGGTCGAACCTGGT 59.285 45.833 0.00 0.00 39.58 4.00
206 207 4.202121 CGGGATATATATGGTCGAACCTGG 60.202 50.000 0.00 0.00 39.58 4.45
207 208 4.401519 ACGGGATATATATGGTCGAACCTG 59.598 45.833 0.00 1.22 39.58 4.00
208 209 4.607239 ACGGGATATATATGGTCGAACCT 58.393 43.478 0.00 0.00 39.58 3.50
209 210 4.202090 GGACGGGATATATATGGTCGAACC 60.202 50.000 0.00 0.00 39.22 3.62
210 211 4.202090 GGGACGGGATATATATGGTCGAAC 60.202 50.000 0.00 0.00 0.00 3.95
211 212 3.956199 GGGACGGGATATATATGGTCGAA 59.044 47.826 0.00 0.00 0.00 3.71
212 213 3.559069 GGGACGGGATATATATGGTCGA 58.441 50.000 0.00 0.00 0.00 4.20
213 214 2.626743 GGGGACGGGATATATATGGTCG 59.373 54.545 0.00 4.04 0.00 4.79
214 215 3.649843 TGGGGACGGGATATATATGGTC 58.350 50.000 0.00 5.04 0.00 4.02
215 216 3.788116 TGGGGACGGGATATATATGGT 57.212 47.619 0.00 0.00 0.00 3.55
216 217 3.258372 CGATGGGGACGGGATATATATGG 59.742 52.174 0.00 0.00 0.00 2.74
217 218 4.149598 TCGATGGGGACGGGATATATATG 58.850 47.826 0.00 0.00 0.00 1.78
218 219 4.464652 TCGATGGGGACGGGATATATAT 57.535 45.455 0.00 0.00 0.00 0.86
219 220 3.957508 TCGATGGGGACGGGATATATA 57.042 47.619 0.00 0.00 0.00 0.86
220 221 2.840640 TCGATGGGGACGGGATATAT 57.159 50.000 0.00 0.00 0.00 0.86
221 222 2.840640 ATCGATGGGGACGGGATATA 57.159 50.000 0.00 0.00 0.00 0.86
222 223 1.831736 GAATCGATGGGGACGGGATAT 59.168 52.381 0.00 0.00 0.00 1.63
223 224 1.203137 AGAATCGATGGGGACGGGATA 60.203 52.381 0.00 0.00 0.00 2.59
224 225 0.471971 AGAATCGATGGGGACGGGAT 60.472 55.000 0.00 0.00 0.00 3.85
225 226 0.689745 AAGAATCGATGGGGACGGGA 60.690 55.000 0.00 0.00 0.00 5.14
226 227 0.180406 AAAGAATCGATGGGGACGGG 59.820 55.000 0.00 0.00 0.00 5.28
227 228 1.583054 GAAAGAATCGATGGGGACGG 58.417 55.000 0.00 0.00 0.00 4.79
228 229 1.139058 AGGAAAGAATCGATGGGGACG 59.861 52.381 0.00 0.00 0.00 4.79
229 230 2.436173 AGAGGAAAGAATCGATGGGGAC 59.564 50.000 0.00 0.00 0.00 4.46
230 231 2.764269 AGAGGAAAGAATCGATGGGGA 58.236 47.619 0.00 0.00 0.00 4.81
231 232 4.899352 ATAGAGGAAAGAATCGATGGGG 57.101 45.455 0.00 0.00 0.00 4.96
232 233 6.058183 ACAAATAGAGGAAAGAATCGATGGG 58.942 40.000 0.00 0.00 0.00 4.00
233 234 7.254932 GGAACAAATAGAGGAAAGAATCGATGG 60.255 40.741 0.00 0.00 0.00 3.51
234 235 7.254932 GGGAACAAATAGAGGAAAGAATCGATG 60.255 40.741 0.00 0.00 0.00 3.84
235 236 6.768381 GGGAACAAATAGAGGAAAGAATCGAT 59.232 38.462 0.00 0.00 0.00 3.59
236 237 6.070194 AGGGAACAAATAGAGGAAAGAATCGA 60.070 38.462 0.00 0.00 0.00 3.59
237 238 6.116126 AGGGAACAAATAGAGGAAAGAATCG 58.884 40.000 0.00 0.00 0.00 3.34
238 239 7.611855 TGAAGGGAACAAATAGAGGAAAGAATC 59.388 37.037 0.00 0.00 0.00 2.52
239 240 7.394641 GTGAAGGGAACAAATAGAGGAAAGAAT 59.605 37.037 0.00 0.00 0.00 2.40
240 241 6.715264 GTGAAGGGAACAAATAGAGGAAAGAA 59.285 38.462 0.00 0.00 0.00 2.52
241 242 6.238648 GTGAAGGGAACAAATAGAGGAAAGA 58.761 40.000 0.00 0.00 0.00 2.52
242 243 5.416013 GGTGAAGGGAACAAATAGAGGAAAG 59.584 44.000 0.00 0.00 0.00 2.62
243 244 5.074515 AGGTGAAGGGAACAAATAGAGGAAA 59.925 40.000 0.00 0.00 0.00 3.13
244 245 4.601857 AGGTGAAGGGAACAAATAGAGGAA 59.398 41.667 0.00 0.00 0.00 3.36
245 246 4.175962 AGGTGAAGGGAACAAATAGAGGA 58.824 43.478 0.00 0.00 0.00 3.71
246 247 4.019321 TGAGGTGAAGGGAACAAATAGAGG 60.019 45.833 0.00 0.00 0.00 3.69
247 248 4.938226 GTGAGGTGAAGGGAACAAATAGAG 59.062 45.833 0.00 0.00 0.00 2.43
248 249 4.263331 GGTGAGGTGAAGGGAACAAATAGA 60.263 45.833 0.00 0.00 0.00 1.98
249 250 4.010349 GGTGAGGTGAAGGGAACAAATAG 58.990 47.826 0.00 0.00 0.00 1.73
250 251 3.558321 CGGTGAGGTGAAGGGAACAAATA 60.558 47.826 0.00 0.00 0.00 1.40
251 252 2.814097 CGGTGAGGTGAAGGGAACAAAT 60.814 50.000 0.00 0.00 0.00 2.32
252 253 1.476110 CGGTGAGGTGAAGGGAACAAA 60.476 52.381 0.00 0.00 0.00 2.83
253 254 0.107831 CGGTGAGGTGAAGGGAACAA 59.892 55.000 0.00 0.00 0.00 2.83
254 255 1.752198 CGGTGAGGTGAAGGGAACA 59.248 57.895 0.00 0.00 0.00 3.18
255 256 1.003718 CCGGTGAGGTGAAGGGAAC 60.004 63.158 0.00 0.00 34.51 3.62
256 257 2.221299 CCCGGTGAGGTGAAGGGAA 61.221 63.158 0.00 0.00 44.70 3.97
257 258 2.606519 CCCGGTGAGGTGAAGGGA 60.607 66.667 0.00 0.00 44.70 4.20
258 259 1.774894 TTTCCCGGTGAGGTGAAGGG 61.775 60.000 0.00 0.00 43.32 3.95
259 260 0.321653 CTTTCCCGGTGAGGTGAAGG 60.322 60.000 0.00 0.00 38.74 3.46
260 261 0.321653 CCTTTCCCGGTGAGGTGAAG 60.322 60.000 0.00 0.00 38.74 3.02
261 262 1.758592 CCTTTCCCGGTGAGGTGAA 59.241 57.895 0.00 0.00 38.74 3.18
262 263 2.221299 CCCTTTCCCGGTGAGGTGA 61.221 63.158 0.00 0.00 38.74 4.02
263 264 2.185310 CTCCCTTTCCCGGTGAGGTG 62.185 65.000 0.00 0.00 38.74 4.00
264 265 1.918800 CTCCCTTTCCCGGTGAGGT 60.919 63.158 0.00 0.00 38.74 3.85
265 266 2.670148 CCTCCCTTTCCCGGTGAGG 61.670 68.421 0.00 4.24 36.13 3.86
266 267 2.990479 CCTCCCTTTCCCGGTGAG 59.010 66.667 0.00 0.00 0.00 3.51
267 268 3.327404 GCCTCCCTTTCCCGGTGA 61.327 66.667 0.00 0.00 0.00 4.02
268 269 4.778143 CGCCTCCCTTTCCCGGTG 62.778 72.222 0.00 0.00 0.00 4.94
274 275 4.717313 AACCCGCGCCTCCCTTTC 62.717 66.667 0.00 0.00 0.00 2.62
275 276 4.280019 AAACCCGCGCCTCCCTTT 62.280 61.111 0.00 0.00 0.00 3.11
276 277 4.717313 GAAACCCGCGCCTCCCTT 62.717 66.667 0.00 0.00 0.00 3.95
278 279 4.717313 AAGAAACCCGCGCCTCCC 62.717 66.667 0.00 0.00 0.00 4.30
279 280 3.431725 CAAGAAACCCGCGCCTCC 61.432 66.667 0.00 0.00 0.00 4.30
280 281 2.358247 TCAAGAAACCCGCGCCTC 60.358 61.111 0.00 0.00 0.00 4.70
281 282 2.358737 CTCAAGAAACCCGCGCCT 60.359 61.111 0.00 0.00 0.00 5.52
282 283 2.258726 AACTCAAGAAACCCGCGCC 61.259 57.895 0.00 0.00 0.00 6.53
283 284 1.082104 CAACTCAAGAAACCCGCGC 60.082 57.895 0.00 0.00 0.00 6.86
284 285 0.234884 GTCAACTCAAGAAACCCGCG 59.765 55.000 0.00 0.00 0.00 6.46
285 286 0.234884 CGTCAACTCAAGAAACCCGC 59.765 55.000 0.00 0.00 0.00 6.13
286 287 0.234884 GCGTCAACTCAAGAAACCCG 59.765 55.000 0.00 0.00 0.00 5.28
287 288 0.234884 CGCGTCAACTCAAGAAACCC 59.765 55.000 0.00 0.00 0.00 4.11
288 289 0.234884 CCGCGTCAACTCAAGAAACC 59.765 55.000 4.92 0.00 0.00 3.27
289 290 0.935196 ACCGCGTCAACTCAAGAAAC 59.065 50.000 4.92 0.00 0.00 2.78
290 291 0.934496 CACCGCGTCAACTCAAGAAA 59.066 50.000 4.92 0.00 0.00 2.52
291 292 0.179094 ACACCGCGTCAACTCAAGAA 60.179 50.000 4.92 0.00 0.00 2.52
292 293 0.596600 GACACCGCGTCAACTCAAGA 60.597 55.000 4.92 0.00 44.69 3.02
293 294 1.853319 GACACCGCGTCAACTCAAG 59.147 57.895 4.92 0.00 44.69 3.02
294 295 1.947146 CGACACCGCGTCAACTCAA 60.947 57.895 4.92 0.00 45.70 3.02
295 296 2.354188 CGACACCGCGTCAACTCA 60.354 61.111 4.92 0.00 45.70 3.41
296 297 1.873355 GAACGACACCGCGTCAACTC 61.873 60.000 4.92 0.00 45.70 3.01
297 298 1.947642 GAACGACACCGCGTCAACT 60.948 57.895 4.92 0.00 45.70 3.16
298 299 2.542896 GAACGACACCGCGTCAAC 59.457 61.111 4.92 0.00 45.70 3.18
299 300 3.025743 CGAACGACACCGCGTCAA 61.026 61.111 4.92 0.00 45.70 3.18
300 301 4.986587 CCGAACGACACCGCGTCA 62.987 66.667 4.92 0.00 45.70 4.35
301 302 4.988486 ACCGAACGACACCGCGTC 62.988 66.667 4.92 0.00 44.86 5.19
303 304 4.986587 TCACCGAACGACACCGCG 62.987 66.667 0.00 0.00 39.95 6.46
304 305 1.562575 AATTCACCGAACGACACCGC 61.563 55.000 0.00 0.00 39.95 5.68
305 306 0.863144 AAATTCACCGAACGACACCG 59.137 50.000 0.00 0.00 42.50 4.94
306 307 1.600485 ACAAATTCACCGAACGACACC 59.400 47.619 0.00 0.00 0.00 4.16
307 308 2.635444 CACAAATTCACCGAACGACAC 58.365 47.619 0.00 0.00 0.00 3.67
308 309 1.003331 GCACAAATTCACCGAACGACA 60.003 47.619 0.00 0.00 0.00 4.35
309 310 1.003331 TGCACAAATTCACCGAACGAC 60.003 47.619 0.00 0.00 0.00 4.34
310 311 1.262950 CTGCACAAATTCACCGAACGA 59.737 47.619 0.00 0.00 0.00 3.85
311 312 1.002900 ACTGCACAAATTCACCGAACG 60.003 47.619 0.00 0.00 0.00 3.95
312 313 2.384382 CACTGCACAAATTCACCGAAC 58.616 47.619 0.00 0.00 0.00 3.95
313 314 1.268999 GCACTGCACAAATTCACCGAA 60.269 47.619 0.00 0.00 0.00 4.30
314 315 0.310543 GCACTGCACAAATTCACCGA 59.689 50.000 0.00 0.00 0.00 4.69
315 316 0.030504 TGCACTGCACAAATTCACCG 59.969 50.000 0.00 0.00 31.71 4.94
316 317 1.860326 GTTGCACTGCACAAATTCACC 59.140 47.619 2.26 0.00 38.71 4.02
317 318 2.538437 TGTTGCACTGCACAAATTCAC 58.462 42.857 2.26 0.00 38.71 3.18
318 319 2.928757 GTTGTTGCACTGCACAAATTCA 59.071 40.909 15.93 3.60 38.71 2.57
319 320 2.034675 CGTTGTTGCACTGCACAAATTC 60.035 45.455 15.93 7.48 38.71 2.17
320 321 1.925847 CGTTGTTGCACTGCACAAATT 59.074 42.857 15.93 0.00 38.71 1.82
321 322 1.558741 CGTTGTTGCACTGCACAAAT 58.441 45.000 15.93 0.00 38.71 2.32
322 323 0.457509 CCGTTGTTGCACTGCACAAA 60.458 50.000 15.93 6.93 38.71 2.83
323 324 1.138459 CCGTTGTTGCACTGCACAA 59.862 52.632 2.26 8.80 38.71 3.33
324 325 2.769539 CCCGTTGTTGCACTGCACA 61.770 57.895 2.26 2.80 38.71 4.57
325 326 2.026014 CCCGTTGTTGCACTGCAC 59.974 61.111 2.26 0.03 38.71 4.57
326 327 3.898509 GCCCGTTGTTGCACTGCA 61.899 61.111 0.00 0.00 36.47 4.41
327 328 3.898509 TGCCCGTTGTTGCACTGC 61.899 61.111 0.00 0.00 31.31 4.40
373 374 1.951631 GCTCATTACCGAGGCGCTC 60.952 63.158 7.64 1.63 33.36 5.03
374 375 2.107141 GCTCATTACCGAGGCGCT 59.893 61.111 7.64 0.00 33.36 5.92
375 376 3.330853 CGCTCATTACCGAGGCGC 61.331 66.667 0.00 0.00 33.36 6.53
376 377 2.658593 CCGCTCATTACCGAGGCG 60.659 66.667 0.00 0.00 34.48 5.52
377 378 2.967615 GCCGCTCATTACCGAGGC 60.968 66.667 0.00 0.00 38.86 4.70
378 379 1.592669 CTGCCGCTCATTACCGAGG 60.593 63.158 0.00 0.00 33.36 4.63
379 380 1.141881 ACTGCCGCTCATTACCGAG 59.858 57.895 0.00 0.00 36.02 4.63
380 381 1.153647 CACTGCCGCTCATTACCGA 60.154 57.895 0.00 0.00 0.00 4.69
381 382 2.813179 GCACTGCCGCTCATTACCG 61.813 63.158 0.00 0.00 0.00 4.02
382 383 2.472909 GGCACTGCCGCTCATTACC 61.473 63.158 3.73 0.00 39.62 2.85
383 384 3.102097 GGCACTGCCGCTCATTAC 58.898 61.111 3.73 0.00 39.62 1.89
393 394 2.666190 TCGCACTTCTGGCACTGC 60.666 61.111 0.00 0.00 0.00 4.40
394 395 2.675056 GCTCGCACTTCTGGCACTG 61.675 63.158 0.00 0.00 0.00 3.66
395 396 2.358003 GCTCGCACTTCTGGCACT 60.358 61.111 0.00 0.00 0.00 4.40
396 397 3.782244 CGCTCGCACTTCTGGCAC 61.782 66.667 0.00 0.00 0.00 5.01
397 398 4.299547 ACGCTCGCACTTCTGGCA 62.300 61.111 0.00 0.00 0.00 4.92
398 399 3.782244 CACGCTCGCACTTCTGGC 61.782 66.667 0.00 0.00 0.00 4.85
399 400 3.114616 CCACGCTCGCACTTCTGG 61.115 66.667 0.00 0.00 0.00 3.86
400 401 3.782244 GCCACGCTCGCACTTCTG 61.782 66.667 0.00 0.00 0.00 3.02
413 414 4.752879 TGTAGAAGCCGCCGCCAC 62.753 66.667 0.00 0.00 34.57 5.01
414 415 3.733344 GATGTAGAAGCCGCCGCCA 62.733 63.158 0.00 0.00 34.57 5.69
415 416 2.967615 GATGTAGAAGCCGCCGCC 60.968 66.667 0.00 0.00 34.57 6.13
416 417 2.967615 GGATGTAGAAGCCGCCGC 60.968 66.667 0.00 0.00 0.00 6.53
417 418 0.317160 TATGGATGTAGAAGCCGCCG 59.683 55.000 0.00 0.00 0.00 6.46
418 419 2.143925 GTTATGGATGTAGAAGCCGCC 58.856 52.381 0.00 0.00 0.00 6.13
419 420 2.544267 GTGTTATGGATGTAGAAGCCGC 59.456 50.000 0.00 0.00 0.00 6.53
420 421 2.794910 CGTGTTATGGATGTAGAAGCCG 59.205 50.000 0.00 0.00 0.00 5.52
421 422 3.131396 CCGTGTTATGGATGTAGAAGCC 58.869 50.000 0.00 0.00 0.00 4.35
422 423 2.544267 GCCGTGTTATGGATGTAGAAGC 59.456 50.000 0.00 0.00 0.00 3.86
423 424 2.794910 CGCCGTGTTATGGATGTAGAAG 59.205 50.000 0.00 0.00 0.00 2.85
424 425 2.427812 TCGCCGTGTTATGGATGTAGAA 59.572 45.455 0.00 0.00 0.00 2.10
425 426 2.025898 TCGCCGTGTTATGGATGTAGA 58.974 47.619 0.00 0.00 0.00 2.59
426 427 2.502213 TCGCCGTGTTATGGATGTAG 57.498 50.000 0.00 0.00 0.00 2.74
427 428 3.127589 CAATCGCCGTGTTATGGATGTA 58.872 45.455 0.00 0.00 0.00 2.29
428 429 1.939934 CAATCGCCGTGTTATGGATGT 59.060 47.619 0.00 0.00 0.00 3.06
429 430 2.032894 GTCAATCGCCGTGTTATGGATG 60.033 50.000 0.00 0.00 0.00 3.51
430 431 2.210116 GTCAATCGCCGTGTTATGGAT 58.790 47.619 0.00 0.00 0.00 3.41
431 432 1.647346 GTCAATCGCCGTGTTATGGA 58.353 50.000 0.00 0.00 0.00 3.41
432 433 0.300491 CGTCAATCGCCGTGTTATGG 59.700 55.000 0.00 0.00 0.00 2.74
433 434 0.996462 ACGTCAATCGCCGTGTTATG 59.004 50.000 0.00 0.00 44.19 1.90
434 435 1.274596 GACGTCAATCGCCGTGTTAT 58.725 50.000 11.55 0.00 44.19 1.89
435 436 1.066656 CGACGTCAATCGCCGTGTTA 61.067 55.000 17.16 0.00 44.19 2.41
436 437 2.369629 CGACGTCAATCGCCGTGTT 61.370 57.895 17.16 0.00 44.19 3.32
437 438 2.803670 CGACGTCAATCGCCGTGT 60.804 61.111 17.16 0.00 44.19 4.49
441 442 1.007336 AGACAACGACGTCAATCGCC 61.007 55.000 17.16 0.00 46.22 5.54
442 443 0.362512 GAGACAACGACGTCAATCGC 59.637 55.000 17.16 4.98 46.22 4.58
444 445 0.982673 CGGAGACAACGACGTCAATC 59.017 55.000 17.16 6.79 38.43 2.67
445 446 1.007336 GCGGAGACAACGACGTCAAT 61.007 55.000 17.16 0.00 38.43 2.57
446 447 1.659335 GCGGAGACAACGACGTCAA 60.659 57.895 17.16 0.00 38.43 3.18
447 448 2.050714 GCGGAGACAACGACGTCA 60.051 61.111 17.16 0.00 38.43 4.35
448 449 3.164011 CGCGGAGACAACGACGTC 61.164 66.667 5.18 5.18 36.08 4.34
449 450 4.695231 CCGCGGAGACAACGACGT 62.695 66.667 24.07 0.00 32.16 4.34
499 500 2.005451 CTCATGGAAAGTGGCGAAGAG 58.995 52.381 0.00 0.00 0.00 2.85
500 501 1.945819 GCTCATGGAAAGTGGCGAAGA 60.946 52.381 0.00 0.00 0.00 2.87
501 502 0.449388 GCTCATGGAAAGTGGCGAAG 59.551 55.000 0.00 0.00 0.00 3.79
502 503 0.036732 AGCTCATGGAAAGTGGCGAA 59.963 50.000 0.00 0.00 0.00 4.70
503 504 0.036732 AAGCTCATGGAAAGTGGCGA 59.963 50.000 0.00 0.00 0.00 5.54
504 505 0.169672 CAAGCTCATGGAAAGTGGCG 59.830 55.000 0.00 0.00 0.00 5.69
505 506 1.538047 TCAAGCTCATGGAAAGTGGC 58.462 50.000 0.00 0.00 0.00 5.01
506 507 3.190118 GTCTTCAAGCTCATGGAAAGTGG 59.810 47.826 0.00 0.00 0.00 4.00
507 508 3.190118 GGTCTTCAAGCTCATGGAAAGTG 59.810 47.826 0.00 0.00 0.00 3.16
508 509 3.181440 TGGTCTTCAAGCTCATGGAAAGT 60.181 43.478 0.00 0.00 0.00 2.66
509 510 3.415212 TGGTCTTCAAGCTCATGGAAAG 58.585 45.455 0.00 0.00 0.00 2.62
510 511 3.507162 TGGTCTTCAAGCTCATGGAAA 57.493 42.857 0.00 0.00 0.00 3.13
511 512 3.149196 GTTGGTCTTCAAGCTCATGGAA 58.851 45.455 0.00 0.00 35.80 3.53
512 513 2.106338 TGTTGGTCTTCAAGCTCATGGA 59.894 45.455 0.00 0.00 35.80 3.41
513 514 2.486982 CTGTTGGTCTTCAAGCTCATGG 59.513 50.000 0.00 0.00 35.80 3.66
514 515 2.486982 CCTGTTGGTCTTCAAGCTCATG 59.513 50.000 0.00 0.00 35.80 3.07
515 516 2.553904 CCCTGTTGGTCTTCAAGCTCAT 60.554 50.000 0.00 0.00 35.80 2.90
516 517 1.202806 CCCTGTTGGTCTTCAAGCTCA 60.203 52.381 0.00 0.00 35.80 4.26
517 518 1.528129 CCCTGTTGGTCTTCAAGCTC 58.472 55.000 0.00 0.00 35.80 4.09
518 519 0.538287 GCCCTGTTGGTCTTCAAGCT 60.538 55.000 0.00 0.00 35.80 3.74
519 520 1.856265 CGCCCTGTTGGTCTTCAAGC 61.856 60.000 0.00 0.00 35.80 4.01
520 521 1.856265 GCGCCCTGTTGGTCTTCAAG 61.856 60.000 0.00 0.00 35.80 3.02
521 522 1.896660 GCGCCCTGTTGGTCTTCAA 60.897 57.895 0.00 0.00 36.04 2.69
522 523 2.281484 GCGCCCTGTTGGTCTTCA 60.281 61.111 0.00 0.00 36.04 3.02
523 524 1.675641 ATGCGCCCTGTTGGTCTTC 60.676 57.895 4.18 0.00 36.04 2.87
524 525 1.973281 CATGCGCCCTGTTGGTCTT 60.973 57.895 4.18 0.00 36.04 3.01
525 526 2.360350 CATGCGCCCTGTTGGTCT 60.360 61.111 4.18 0.00 36.04 3.85
526 527 4.120331 GCATGCGCCCTGTTGGTC 62.120 66.667 4.18 0.00 36.04 4.02
545 546 0.667792 GTCAGCTTCTCCACGGTGAC 60.668 60.000 10.28 5.95 46.86 3.67
546 547 1.666011 GTCAGCTTCTCCACGGTGA 59.334 57.895 10.28 0.00 35.52 4.02
547 548 1.374758 GGTCAGCTTCTCCACGGTG 60.375 63.158 0.00 0.00 0.00 4.94
548 549 1.122019 AAGGTCAGCTTCTCCACGGT 61.122 55.000 0.00 0.00 0.00 4.83
549 550 0.671781 CAAGGTCAGCTTCTCCACGG 60.672 60.000 0.00 0.00 0.00 4.94
550 551 0.034059 ACAAGGTCAGCTTCTCCACG 59.966 55.000 0.00 0.00 0.00 4.94
551 552 1.876156 CAACAAGGTCAGCTTCTCCAC 59.124 52.381 0.00 0.00 0.00 4.02
552 553 1.768275 TCAACAAGGTCAGCTTCTCCA 59.232 47.619 0.00 0.00 0.00 3.86
553 554 2.147150 GTCAACAAGGTCAGCTTCTCC 58.853 52.381 0.00 0.00 0.00 3.71
554 555 1.795286 CGTCAACAAGGTCAGCTTCTC 59.205 52.381 0.00 0.00 0.00 2.87
555 556 1.541233 CCGTCAACAAGGTCAGCTTCT 60.541 52.381 0.00 0.00 0.00 2.85
556 557 0.868406 CCGTCAACAAGGTCAGCTTC 59.132 55.000 0.00 0.00 0.00 3.86
557 558 0.180406 ACCGTCAACAAGGTCAGCTT 59.820 50.000 0.00 0.00 35.50 3.74
558 559 0.532862 CACCGTCAACAAGGTCAGCT 60.533 55.000 0.00 0.00 39.00 4.24
559 560 1.941812 CACCGTCAACAAGGTCAGC 59.058 57.895 0.00 0.00 39.00 4.26
560 561 1.507141 GGCACCGTCAACAAGGTCAG 61.507 60.000 0.00 0.00 39.00 3.51
561 562 1.525077 GGCACCGTCAACAAGGTCA 60.525 57.895 0.00 0.00 39.00 4.02
562 563 2.604174 CGGCACCGTCAACAAGGTC 61.604 63.158 0.00 0.00 39.00 3.85
563 564 2.590575 CGGCACCGTCAACAAGGT 60.591 61.111 0.00 0.00 42.34 3.50
564 565 4.025401 GCGGCACCGTCAACAAGG 62.025 66.667 11.27 0.00 42.09 3.61
565 566 3.276091 TGCGGCACCGTCAACAAG 61.276 61.111 11.27 0.00 42.09 3.16
566 567 3.578272 GTGCGGCACCGTCAACAA 61.578 61.111 22.19 0.00 42.09 2.83
571 572 4.796231 ATCTCGTGCGGCACCGTC 62.796 66.667 26.00 2.76 42.09 4.79
581 582 2.084610 TCCTCAACAAGCATCTCGTG 57.915 50.000 0.00 0.00 0.00 4.35
582 583 2.625737 CATCCTCAACAAGCATCTCGT 58.374 47.619 0.00 0.00 0.00 4.18
583 584 1.329906 GCATCCTCAACAAGCATCTCG 59.670 52.381 0.00 0.00 0.00 4.04
584 585 2.097142 GTGCATCCTCAACAAGCATCTC 59.903 50.000 0.00 0.00 37.56 2.75
585 586 2.089980 GTGCATCCTCAACAAGCATCT 58.910 47.619 0.00 0.00 37.56 2.90
586 587 1.133790 GGTGCATCCTCAACAAGCATC 59.866 52.381 0.00 0.00 37.56 3.91
587 588 1.180029 GGTGCATCCTCAACAAGCAT 58.820 50.000 0.00 0.00 37.56 3.79
588 589 1.236616 CGGTGCATCCTCAACAAGCA 61.237 55.000 0.00 0.00 0.00 3.91
589 590 1.237285 ACGGTGCATCCTCAACAAGC 61.237 55.000 0.00 0.00 0.00 4.01
590 591 0.798776 GACGGTGCATCCTCAACAAG 59.201 55.000 0.00 0.00 0.00 3.16
591 592 0.605319 GGACGGTGCATCCTCAACAA 60.605 55.000 0.00 0.00 33.03 2.83
592 593 1.003839 GGACGGTGCATCCTCAACA 60.004 57.895 0.00 0.00 33.03 3.33
593 594 1.003839 TGGACGGTGCATCCTCAAC 60.004 57.895 6.40 0.00 37.13 3.18
594 595 1.296392 CTGGACGGTGCATCCTCAA 59.704 57.895 1.88 0.00 37.13 3.02
595 596 2.659063 CCTGGACGGTGCATCCTCA 61.659 63.158 1.88 0.00 37.13 3.86
596 597 2.187946 CCTGGACGGTGCATCCTC 59.812 66.667 1.88 0.00 37.13 3.71
597 598 2.284625 TCCTGGACGGTGCATCCT 60.285 61.111 1.88 0.00 37.13 3.24
598 599 2.125106 GTCCTGGACGGTGCATCC 60.125 66.667 11.71 0.00 36.70 3.51
607 608 1.737008 GAGCGAAACCGTCCTGGAC 60.737 63.158 16.99 16.99 42.00 4.02
608 609 2.654877 GAGCGAAACCGTCCTGGA 59.345 61.111 0.00 0.00 42.00 3.86
609 610 2.434359 GGAGCGAAACCGTCCTGG 60.434 66.667 0.00 0.00 46.41 4.45
610 611 2.809601 CGGAGCGAAACCGTCCTG 60.810 66.667 0.00 0.00 44.57 3.86
627 628 4.509230 TCACTCTCTTATCAATGCGAATGC 59.491 41.667 0.00 0.00 43.20 3.56
628 629 6.594284 TTCACTCTCTTATCAATGCGAATG 57.406 37.500 0.00 0.00 0.00 2.67
629 630 7.637229 CAATTCACTCTCTTATCAATGCGAAT 58.363 34.615 0.00 0.00 0.00 3.34
630 631 6.457392 GCAATTCACTCTCTTATCAATGCGAA 60.457 38.462 0.00 0.00 0.00 4.70
631 632 5.007039 GCAATTCACTCTCTTATCAATGCGA 59.993 40.000 0.00 0.00 0.00 5.10
632 633 5.203370 GCAATTCACTCTCTTATCAATGCG 58.797 41.667 0.00 0.00 0.00 4.73
633 634 6.127810 TGCAATTCACTCTCTTATCAATGC 57.872 37.500 0.00 0.00 0.00 3.56
634 635 7.982224 TCTTGCAATTCACTCTCTTATCAATG 58.018 34.615 0.00 0.00 0.00 2.82
635 636 8.571461 TTCTTGCAATTCACTCTCTTATCAAT 57.429 30.769 0.00 0.00 0.00 2.57
636 637 7.984422 TTCTTGCAATTCACTCTCTTATCAA 57.016 32.000 0.00 0.00 0.00 2.57
637 638 7.094634 GGTTTCTTGCAATTCACTCTCTTATCA 60.095 37.037 0.00 0.00 0.00 2.15
638 639 7.094634 TGGTTTCTTGCAATTCACTCTCTTATC 60.095 37.037 0.00 0.00 0.00 1.75
639 640 6.716628 TGGTTTCTTGCAATTCACTCTCTTAT 59.283 34.615 0.00 0.00 0.00 1.73
640 641 6.017109 GTGGTTTCTTGCAATTCACTCTCTTA 60.017 38.462 0.00 0.00 0.00 2.10
641 642 4.889409 TGGTTTCTTGCAATTCACTCTCTT 59.111 37.500 0.00 0.00 0.00 2.85
642 643 4.276926 GTGGTTTCTTGCAATTCACTCTCT 59.723 41.667 0.00 0.00 0.00 3.10
914 915 1.381056 GGGAGCAGAGAGGAGAGCA 60.381 63.158 0.00 0.00 0.00 4.26
934 935 2.413963 GGAGCAGAGAGAGCGAGCA 61.414 63.158 0.00 0.00 37.01 4.26
1319 1342 4.075963 ACTGGAATGCTGCAAACAAAAT 57.924 36.364 6.36 0.00 0.00 1.82
1407 4943 8.232412 ACATGAATAGTACCTATGAACCCTAGA 58.768 37.037 0.00 0.00 0.00 2.43
1414 4950 9.601810 ATCCAGTACATGAATAGTACCTATGAA 57.398 33.333 0.00 0.00 42.09 2.57
1426 4962 8.530311 TGCAATACAAAAATCCAGTACATGAAT 58.470 29.630 0.00 0.00 0.00 2.57
1430 4966 6.127366 CCCTGCAATACAAAAATCCAGTACAT 60.127 38.462 0.00 0.00 0.00 2.29
1477 5013 3.614092 CAAATGCTCATCTACCCACTGT 58.386 45.455 0.00 0.00 0.00 3.55
1687 5224 1.729586 TCTGGTTTACCTCAGGCTGT 58.270 50.000 15.27 0.00 36.82 4.40
2535 6416 0.670162 AACAATGAAGTGCAGCGCTT 59.330 45.000 21.36 21.36 36.87 4.68
2541 6422 2.223456 CGGTGAACAACAATGAAGTGCA 60.223 45.455 0.00 0.00 0.00 4.57
2633 6621 0.597637 ACAACCAAGAGCTCGTCGTG 60.598 55.000 8.37 6.97 34.64 4.35
2732 6720 1.520120 CGACGAGCCTGATGTGCAT 60.520 57.895 0.00 0.00 0.00 3.96
2837 6831 0.820074 CCGAGTCCTCTGGCGACTAT 60.820 60.000 0.00 0.00 40.67 2.12
2893 6887 2.514824 GGGAGAGGCGCAATCCAC 60.515 66.667 21.66 11.00 34.62 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.